BLASTX nr result
ID: Sinomenium22_contig00038769
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00038769
(356 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 56 2e-12
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu] 49 4e-10
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic... 50 9e-10
gb|EXB56439.1| putative CRM domain-containing protein [Morus not... 47 2e-09
emb|CCH50954.1| T1.2 [Malus x robusta] 50 6e-09
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 45 7e-09
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 44 7e-09
gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptas... 45 1e-08
gb|EMS52533.1| ATP-citrate synthase [Triticum urartu] 43 2e-08
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea] 50 2e-08
gb|EXC31207.1| DNA ligase 4 [Morus notabilis] 47 2e-08
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 42 4e-08
ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366... 45 7e-08
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840... 43 8e-08
gb|EMT12744.1| Exostosin-1 [Aegilops tauschii] 47 2e-07
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 44 2e-07
gb|ACN78498.1| putative reverse transcriptase [Arachis hypogaea] 50 2e-07
gb|EXB64623.1| Enhancer of mRNA-decapping protein 4 [Morus notab... 43 4e-07
ref|XP_003599654.1| L.esculentum protein with leucine zipper [Me... 41 3e-06
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 41 3e-06
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 56.2 bits (134), Expect(2) = 2e-12
Identities = 27/38 (71%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
IY+LR+L+ R R+ KKD HM+FID+EKAYD VSRDIIW
Sbjct: 285 IYLLRRLMERYRDGKKDLHMVFIDLEKAYDRVSRDIIW 322
Score = 41.2 bits (95), Expect(2) = 2e-12
Identities = 23/53 (43%), Positives = 27/53 (50%)
Frame = +3
Query: 198 KKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
KKG Y +D+Y+ +T FPIT GL GS L PYLFALV
Sbjct: 327 KKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYLFALV 379
>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
Length = 605
Score = 48.5 bits (114), Expect(2) = 4e-10
Identities = 20/38 (52%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
I+++R+L+ R RE+KKD HM+FID+EK+YD + R+++W
Sbjct: 104 IFLVRQLMERYREQKKDLHMVFIDLEKSYDKIPRNVMW 141
Score = 41.2 bits (95), Expect(2) = 4e-10
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+Y L +D+YD +T +FPI GL GS L PYLFALV
Sbjct: 152 KYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLFALV 198
>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
Length = 974
Score = 49.7 bits (117), Expect(2) = 9e-10
Identities = 21/38 (55%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
I+++R+L+ R RE+KKD HM+FID+EKAYD + R+++W
Sbjct: 70 IFLVRQLMKRYREQKKDLHMVFIDLEKAYDKIPRNVMW 107
Score = 38.9 bits (89), Expect(2) = 9e-10
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+Y L +D+YD + +FPI GL GS L PYLFALV
Sbjct: 118 KYITLIKDMYDNVVTSVRTSDVDIDDFPIKIGLHQGSALSPYLFALV 164
>gb|EXB56439.1| putative CRM domain-containing protein [Morus notabilis]
Length = 506
Score = 47.0 bits (110), Expect(2) = 2e-09
Identities = 21/38 (55%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
I++LR L+ R +E K D HM+FID+EKAYD V R+++W
Sbjct: 136 IFLLRMLMERYKEAKTDLHMVFIDLEKAYDRVPREVLW 173
Score = 40.8 bits (94), Expect(2) = 2e-09
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +3
Query: 198 KKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
K+G RY + +D+YD T+EFPI GL GS L PYLF +V
Sbjct: 178 KRGVHVRYIKVIKDMYDRVVTSVRTAGGYTAEFPIRIGLNQGSALSPYLFTIV 230
>emb|CCH50954.1| T1.2 [Malus x robusta]
Length = 554
Score = 50.1 bits (118), Expect(2) = 6e-09
Identities = 23/38 (60%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
IY+LRKL+ + R+ K D HM+FID+EK YD V RDI+W
Sbjct: 304 IYLLRKLMEKYRDGKNDLHMVFIDLEKVYDRVPRDILW 341
Score = 35.8 bits (81), Expect(2) = 6e-09
Identities = 21/52 (40%), Positives = 24/52 (46%)
Frame = +3
Query: 198 KKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFAL 353
KKG Y +D+YD + FPIT L GS L PYLFAL
Sbjct: 346 KKGVRVAYIQAIKDMYDGAKTAVRTYEGQIESFPITVRLHQGSSLSPYLFAL 397
>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
Length = 1134
Score = 45.4 bits (106), Expect(2) = 7e-09
Identities = 20/38 (52%), Positives = 32/38 (84%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
I+++R+L+ R RE+KKD HM+FID+EKAY+ + R++ W
Sbjct: 434 IFLVRQLMVRYREQKKDLHMVFIDLEKAYNKIPRNLWW 471
Score = 40.0 bits (92), Expect(2) = 7e-09
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+Y L +D+YD +T +FPI GL GS L PYLFAL+
Sbjct: 481 KYITLIKDMYDNAVTSVRTSDIDTDDFPIKIGLHQGSALSPYLFALL 527
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 44.3 bits (103), Expect(2) = 7e-09
Identities = 19/38 (50%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
IY+LR+++ + R ++D H++FID+EKAYD V R+I+W
Sbjct: 10 IYLLRRVMEQYRMAQQDLHLIFIDLEKAYDRVPREILW 47
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 22/53 (41%), Positives = 27/53 (50%)
Frame = +3
Query: 198 KKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
KKG Y +D+YD E+ +FPIT GL GS L PYLF L+
Sbjct: 52 KKGVRVAYIRAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYLFTLI 104
>gb|ABN08628.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 243
Score = 44.7 bits (104), Expect(2) = 1e-08
Identities = 20/36 (55%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Frame = +2
Query: 80 ILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
+LR+++ R R KKD H++FID+EKAYD V R+I+W
Sbjct: 116 LLRRVMERYRTDKKDLHLVFIDLEKAYDRVPREILW 151
Score = 40.4 bits (93), Expect(2) = 1e-08
Identities = 22/54 (40%), Positives = 28/54 (51%)
Frame = +3
Query: 195 RKKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+KKG Y +D+Y+ +T +FPIT GL GS L PYLF LV
Sbjct: 155 KKKGVRIAYIKAIQDMYEGASTCVRTQDGDTVDFPITIGLHQGSTLSPYLFTLV 208
>gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]
Length = 589
Score = 43.1 bits (100), Expect(2) = 2e-08
Identities = 19/31 (61%), Positives = 26/31 (83%), Gaps = 1/31 (3%)
Frame = +2
Query: 95 IGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
I R RE+KKD HM+FID+EKAYD + R+++W
Sbjct: 399 IERYREQKKDLHMVFIDLEKAYDKIPRNVMW 429
Score = 41.2 bits (95), Expect(2) = 2e-08
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+Y L +D+YD +T +FPI GL GS L PYLFALV
Sbjct: 440 KYITLIKDMYDNVVTSVRTSNVDTDDFPIKIGLHQGSALSPYLFALV 486
>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
Length = 562
Score = 49.7 bits (117), Expect(2) = 2e-08
Identities = 21/38 (55%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
IY+LR+++ R R K+D HM+FID+EKAYD V R+++W
Sbjct: 175 IYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLW 212
Score = 34.7 bits (78), Expect(2) = 2e-08
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = +3
Query: 234 RDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+D+YD T EFPI GL GS L PYLF +V
Sbjct: 229 KDMYDGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTIV 269
>gb|EXC31207.1| DNA ligase 4 [Morus notabilis]
Length = 627
Score = 47.4 bits (111), Expect(2) = 2e-08
Identities = 22/39 (56%), Positives = 31/39 (79%), Gaps = 1/39 (2%)
Frame = +2
Query: 71 LIYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
+I+ILR L+ R RE K D H++FID+EKAYD V R+++W
Sbjct: 526 VIFILRMLMERYREVKTDLHIVFIDLEKAYDRVPREVLW 564
Score = 36.6 bits (83), Expect(2) = 2e-08
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = +3
Query: 198 KKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
K+G RY + +D+YD T+EFPI GL S L PY F +V
Sbjct: 569 KRGVRVRYIKVIKDMYDGVVTSVRTVGGYTTEFPIRIGLHQRSALSPYFFTIV 621
>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 3154
Score = 41.6 bits (96), Expect(2) = 4e-08
Identities = 18/29 (62%), Positives = 25/29 (86%), Gaps = 1/29 (3%)
Frame = +2
Query: 101 RLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
R RE+KKD HM+FID+EKAYD + R+++W
Sbjct: 2186 RYREQKKDLHMVFIDLEKAYDKMPRNVMW 2214
Score = 41.2 bits (95), Expect(2) = 4e-08
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+Y L +D+YD +T +FPI GL GS L PYLFALV
Sbjct: 2225 KYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLFALV 2271
>ref|XP_006010506.1| PREDICTED: uncharacterized protein LOC102366231 [Latimeria
chalumnae]
Length = 1500
Score = 45.1 bits (105), Expect(2) = 7e-08
Identities = 20/38 (52%), Positives = 30/38 (78%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
I+ L+ L+ + +EK+KD HM+F+D+EKAYD V R +IW
Sbjct: 482 IFALKILMEKYKEKRKDLHMVFVDLEKAYDRVPRGLIW 519
Score = 37.0 bits (84), Expect(2) = 7e-08
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +3
Query: 195 RKKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
RK+G Y L +D+Y T+ FP+ G++ GS L P+LF LV
Sbjct: 523 RKRGIPEVYIRLVKDMYQGSKIWVRSACGTTTSFPVKVGVRQGSALSPFLFILV 576
>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
distachyon]
Length = 567
Score = 43.1 bits (100), Expect(2) = 8e-08
Identities = 21/41 (51%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Frame = +2
Query: 71 LIYILRKL--IGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
LI++L K + R +E+KKD HM+FID+EKAYD + R+++W
Sbjct: 196 LIFMLDKAGDLERYKEQKKDLHMVFIDLEKAYDKIPRNVMW 236
Score = 38.9 bits (89), Expect(2) = 8e-08
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+Y L +D+YD +T +FPI GL GS L PYLF LV
Sbjct: 247 KYITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYLFDLV 293
>gb|EMT12744.1| Exostosin-1 [Aegilops tauschii]
Length = 549
Score = 47.0 bits (110), Expect(2) = 2e-07
Identities = 18/38 (47%), Positives = 31/38 (81%)
Frame = +2
Query: 71 LIYILRKLIGRLREKKKDHMLFIDIEKAYDIVSRDIIW 184
+I+++R+L+ R EKK HM+FID+EKAY+ + R+++W
Sbjct: 453 VIFLIRQLVERYMEKKALHMVFIDLEKAYNKIPRNVMW 490
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLF 347
+Y L R+++D +T +FPI GL GS L PYLF
Sbjct: 501 KYITLIRNMHDNIVTSVRTSDGDTDDFPIKIGLHQGSALSPYLF 544
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 44.3 bits (103), Expect(2) = 2e-07
Identities = 19/38 (50%), Positives = 29/38 (76%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
IY+L++++ R R KKD H++F D+EK YD V R+I+W
Sbjct: 263 IYLLQRVMERYRTDKKDLHLVFFDLEKGYDRVPREILW 300
Score = 36.6 bits (83), Expect(2) = 2e-07
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = +3
Query: 234 RDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+D+Y+ T +FPIT GL GS L PYLF LV
Sbjct: 317 KDMYERASTSVKTQDGTTEDFPITIGLHQGSTLTPYLFTLV 357
>gb|ACN78498.1| putative reverse transcriptase [Arachis hypogaea]
Length = 149
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 21/38 (55%), Positives = 31/38 (81%), Gaps = 1/38 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDIIW 184
IY+LR+++ R R K+D HM+FID+EKAYD V R+++W
Sbjct: 49 IYLLRRMMERYRSNKRDLHMVFIDLEKAYDRVPREVLW 86
Score = 31.2 bits (69), Expect(2) = 2e-07
Identities = 18/46 (39%), Positives = 23/46 (50%)
Frame = +3
Query: 219 YNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
Y+ +D+YD T +F I+ GL GS L PYLF LV
Sbjct: 98 YSCAIKDMYDGATTSVKTQGGVTKKFLISIGLYQGSSLSPYLFTLV 143
>gb|EXB64623.1| Enhancer of mRNA-decapping protein 4 [Morus notabilis]
Length = 1633
Score = 42.7 bits (99), Expect(2) = 4e-07
Identities = 20/37 (54%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDII 181
I++LR L+ R RE K D HM+FID+EKAYD + R+++
Sbjct: 590 IFLLRMLMERYREAKTDLHMVFIDLEKAYDRMPREVL 626
Score = 37.0 bits (84), Expect(2) = 4e-07
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLF 347
RY + +D+YD T+EFPI GL+ GS L PYLF
Sbjct: 638 RYIKVIKDMYDGVITSVRTAGGYTTEFPIRIGLRQGSALSPYLF 681
>ref|XP_003599654.1| L.esculentum protein with leucine zipper [Medicago truncatula]
gi|357491299|ref|XP_003615937.1| L.esculentum protein
with leucine zipper [Medicago truncatula]
gi|355488702|gb|AES69905.1| L.esculentum protein with
leucine zipper [Medicago truncatula]
gi|355517272|gb|AES98895.1| L.esculentum protein with
leucine zipper [Medicago truncatula]
Length = 909
Score = 40.8 bits (94), Expect(2) = 3e-06
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +3
Query: 198 KKGDTNRYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
KKG Y + +D+YD +T +FP+T GL GS L PYLF L+
Sbjct: 803 KKGVRVAYIRVIKDMYDGVSTTVRTPEGDTEDFPLTIGLYQGSTLRPYLFTLI 855
Score = 35.8 bits (81), Expect(2) = 3e-06
Identities = 17/37 (45%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Frame = +2
Query: 74 IYILRKLIGRLREKKKD-HMLFIDIEKAYDIVSRDII 181
IY+L++++ R R K+ H++FID+EK YD +SR I+
Sbjct: 761 IYLLQRIMERYRIKQMYVHLVFIDLEKTYDKLSRKIL 797
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 41.2 bits (95), Expect(2) = 3e-06
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 216 RYNNLKRDIYDXXXXXXXXXXXETSEFPITKGLQ*GSVLCPYLFALV 356
+Y L +D+YD +T +FPI GL GS L PYLFALV
Sbjct: 197 KYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGSALSPYLFALV 243
Score = 35.4 bits (80), Expect(2) = 3e-06
Identities = 14/25 (56%), Positives = 21/25 (84%), Gaps = 1/25 (4%)
Frame = +2
Query: 113 KKKD-HMLFIDIEKAYDIVSRDIIW 184
+ KD HM+FID+EKAYD + R+++W
Sbjct: 162 RNKDLHMVFIDLEKAYDKIPRNVMW 186