BLASTX nr result
ID: Sinomenium22_contig00038392
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00038392
(637 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p... 80 5e-13
ref|XP_002300156.2| hypothetical protein POPTR_0001s26030g [Popu... 79 1e-12
ref|XP_007015201.1| Chromatin remodeling complex subunit isoform... 77 6e-12
ref|XP_007015200.1| Chromatin remodeling complex subunit isoform... 77 6e-12
ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Popu... 73 6e-11
ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding... 72 1e-10
ref|XP_007214348.1| hypothetical protein PRUPE_ppa000116mg [Prun... 71 2e-10
ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding... 71 3e-10
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding... 71 3e-10
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M... 71 3e-10
ref|XP_004491263.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain... 70 5e-10
ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, par... 68 3e-09
ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding... 67 3e-09
ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding... 66 8e-09
emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera] 66 8e-09
gb|EXB55506.1| Chromodomain-helicase-DNA-binding protein 1 [Moru... 66 1e-08
ref|XP_007141483.1| hypothetical protein PHAVU_008G199800g [Phas... 65 2e-08
ref|XP_006349779.1| PREDICTED: chromodomain-helicase-DNA-binding... 64 4e-08
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca... 64 4e-08
dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare] 63 7e-08
>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
communis] gi|223529287|gb|EEF31257.1| chromodomain
helicase DNA binding protein, putative [Ricinus
communis]
Length = 1718
Score = 80.1 bits (196), Expect = 5e-13
Identities = 40/75 (53%), Positives = 48/75 (64%)
Frame = -1
Query: 625 SEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXXXXXX 446
SED EGQKD+ GQ+G DVPADEM SD+YYEQDGE+QSDS++YR
Sbjct: 139 SEDEEGQKDLNKGQKGQSDVPADEMLSDEYYEQDGEDQSDSIHYRGFGHSVGLNSRLHLK 198
Query: 445 XXXVNNNTSRSSKKV 401
V NN SRSS+ +
Sbjct: 199 PAPVKNNFSRSSRAI 213
>ref|XP_002300156.2| hypothetical protein POPTR_0001s26030g [Populus trichocarpa]
gi|550348207|gb|EEE84961.2| hypothetical protein
POPTR_0001s26030g [Populus trichocarpa]
Length = 1767
Score = 79.0 bits (193), Expect = 1e-12
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXX 458
DR SED EGQK+ G +GH DVPADEM SD+YYEQDGE+QSDS++YR +
Sbjct: 134 DRLDSEDEEGQKEAGKGGKGHSDVPADEMLSDEYYEQDGEDQSDSVHYRGFSQSVDLSSR 193
Query: 457 XXXXXXXVNNNTSRSSK 407
+ NN SR S+
Sbjct: 194 LQKKPVPIKNNVSRRSR 210
>ref|XP_007015201.1| Chromatin remodeling complex subunit isoform 2 [Theobroma cacao]
gi|508785564|gb|EOY32820.1| Chromatin remodeling complex
subunit isoform 2 [Theobroma cacao]
Length = 1810
Score = 76.6 bits (187), Expect = 6e-12
Identities = 39/80 (48%), Positives = 49/80 (61%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXX 458
DR S+D E QK+V QRGH DVPADEM SD+YYEQDGEEQSD+++YR +
Sbjct: 138 DRLESDDDEAQKEVGKAQRGHSDVPADEMLSDEYYEQDGEEQSDTMHYRGFSNSVGLNTR 197
Query: 457 XXXXXXXVNNNTSRSSKKVN 398
V+ SR S+ +N
Sbjct: 198 PQSKPVCVSTTVSRGSRALN 217
>ref|XP_007015200.1| Chromatin remodeling complex subunit isoform 1 [Theobroma cacao]
gi|590584532|ref|XP_007015202.1| Chromatin remodeling
complex subunit isoform 1 [Theobroma cacao]
gi|508785563|gb|EOY32819.1| Chromatin remodeling complex
subunit isoform 1 [Theobroma cacao]
gi|508785565|gb|EOY32821.1| Chromatin remodeling complex
subunit isoform 1 [Theobroma cacao]
Length = 1768
Score = 76.6 bits (187), Expect = 6e-12
Identities = 39/80 (48%), Positives = 49/80 (61%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXX 458
DR S+D E QK+V QRGH DVPADEM SD+YYEQDGEEQSD+++YR +
Sbjct: 138 DRLESDDDEAQKEVGKAQRGHSDVPADEMLSDEYYEQDGEEQSDTMHYRGFSNSVGLNTR 197
Query: 457 XXXXXXXVNNNTSRSSKKVN 398
V+ SR S+ +N
Sbjct: 198 PQSKPVCVSTTVSRGSRALN 217
>ref|XP_002313369.1| hypothetical protein POPTR_0009s05250g [Populus trichocarpa]
gi|222849777|gb|EEE87324.1| hypothetical protein
POPTR_0009s05250g [Populus trichocarpa]
Length = 1748
Score = 73.2 bits (178), Expect = 6e-11
Identities = 37/73 (50%), Positives = 44/73 (60%)
Frame = -1
Query: 634 RSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXXX 455
R SED EGQK+V G +GH DVPADEM SD+YYEQDGE+QSD + YR +
Sbjct: 135 RLESEDEEGQKEVGRGGKGHSDVPADEMLSDEYYEQDGEDQSDLMRYRGFSKPVDLSSRL 194
Query: 454 XXXXXXVNNNTSR 416
+ NN SR
Sbjct: 195 QSKPVPIKNNVSR 207
>ref|XP_004291747.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like
[Fragaria vesca subsp. vesca]
Length = 1746
Score = 72.4 bits (176), Expect = 1e-10
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYR 491
DR SED G K V GQRGH D+PADEM SD+YYEQDGEEQSDS++YR
Sbjct: 142 DRLDSEDDAGPK-VRKGQRGHSDIPADEMLSDEYYEQDGEEQSDSMHYR 189
>ref|XP_007214348.1| hypothetical protein PRUPE_ppa000116mg [Prunus persica]
gi|462410213|gb|EMJ15547.1| hypothetical protein
PRUPE_ppa000116mg [Prunus persica]
Length = 1761
Score = 71.2 bits (173), Expect = 2e-10
Identities = 38/80 (47%), Positives = 50/80 (62%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXX 458
DR ED++ K V GQRGH D+PADEM SD+YYEQDGEEQSDS++YR +
Sbjct: 142 DRIDFEDNDRPK-VSKGQRGHSDIPADEMLSDEYYEQDGEEQSDSMHYRGFHHSVGSNSR 200
Query: 457 XXXXXXXVNNNTSRSSKKVN 398
V+N+ R+S+ +N
Sbjct: 201 PQSKPAAVSNHALRTSRVLN 220
>ref|XP_006575632.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like
[Glycine max]
Length = 1766
Score = 70.9 bits (172), Expect = 3e-10
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 634 RSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNY 494
R S+D +GQK+ G RGH DVPA+EM SD+YYEQDGEEQSDSL+Y
Sbjct: 143 RLDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDGEEQSDSLHY 189
>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Glycine max] gi|571506899|ref|XP_006595768.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Glycine max]
Length = 1764
Score = 70.9 bits (172), Expect = 3e-10
Identities = 32/47 (68%), Positives = 38/47 (80%)
Frame = -1
Query: 634 RSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNY 494
R S+D +GQK+ G RGH DVPA+EM SD+YYEQDGEEQSDSL+Y
Sbjct: 143 RVDSDDDDGQKEAGKGPRGHSDVPAEEMLSDEYYEQDGEEQSDSLHY 189
>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
gi|355518633|gb|AET00257.1|
Chromodomain-helicase-DNA-binding protein [Medicago
truncatula]
Length = 1739
Score = 70.9 bits (172), Expect = 3e-10
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = -1
Query: 634 RSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNY 494
R SED +GQK+V G+R H DVPA+EM SD+YYEQDGE+QSDSL+Y
Sbjct: 143 RLDSEDDDGQKEVGKGRRSHSDVPAEEMLSDEYYEQDGEDQSDSLHY 189
>ref|XP_004491263.1| PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding
protein 1-like [Cicer arietinum]
Length = 1738
Score = 70.1 bits (170), Expect = 5e-10
Identities = 56/211 (26%), Positives = 79/211 (37%)
Frame = -1
Query: 634 RSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXXX 455
R SED +KD G R H DVPAD+M SD+YYEQDGE+QSDSL+Y ++
Sbjct: 143 RLDSEDDVEKKDAGKGPRSHSDVPADQMLSDEYYEQDGEDQSDSLHYNGIHKPAGPNSWS 202
Query: 454 XXXXXXVNNNTSRSSKKVNXXXXXXXXXXXXXXXXXXXXXXXXXPNNGGNVRSTRNKXXX 275
VN N + S+ + + T NK
Sbjct: 203 RKMSTSVNRNVRKKSRISDDDDDGDVDYEEEDEVDEDDPDDEDFEPAASS--HTLNKDKD 260
Query: 274 XXXXXXXXXXXXXXXXXXXXXXDTDHIRKPHRRGRGKAEHSLKSVREQKSFSTHSRQRRW 95
++ + +KP R + K S+KS R++K+ RQRR+
Sbjct: 261 WEGEGSDENDDSEENLDVSDDDESFYAKKPKGRQQSKVRKSIKSTRDRKTCVASGRQRRF 320
Query: 94 KTFLXXXXXXXXXXXXXXDVNIKGRSKRGTH 2
K+ D + K KR H
Sbjct: 321 KSSFEDNESVTEDSDSNSDDDFKSTKKRSFH 351
>ref|XP_006446246.1| hypothetical protein CICLE_v100140192mg, partial [Citrus
clementina] gi|557548857|gb|ESR59486.1| hypothetical
protein CICLE_v100140192mg, partial [Citrus clementina]
Length = 572
Score = 67.8 bits (164), Expect = 3e-09
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXX 458
DR S+D EGQK +G+ DVPADEM SD+YYEQDGEEQSDS+ YR +
Sbjct: 141 DRLESQD-EGQKPANKAAKGYSDVPADEMLSDEYYEQDGEEQSDSMQYRGFSNSVGLNSR 199
Query: 457 XXXXXXXVNNNTSRSSK 407
VN++ SR S+
Sbjct: 200 SQSKTVAVNSSVSRRSR 216
>ref|XP_006470732.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Citrus sinensis] gi|568833055|ref|XP_006470733.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Citrus sinensis]
Length = 1777
Score = 67.4 bits (163), Expect = 3e-09
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXX 458
DR S+D EGQK +G+ DVPADEM SD+YYEQDGEEQSDS+ YR +
Sbjct: 141 DRLESQD-EGQKPATKAAKGYSDVPADEMLSDEYYEQDGEEQSDSMQYRGFSNSVGLNSR 199
Query: 457 XXXXXXXVNNNTSRSSK 407
VN++ SR S+
Sbjct: 200 SQSKTVAVNSSVSRRSR 216
>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
vinifera]
Length = 1764
Score = 66.2 bits (160), Expect = 8e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -1
Query: 604 KDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELN 482
++V+ Q+G DVPADEMSSDDYYEQDGE+QSDSL+YR LN
Sbjct: 139 REVDKVQKGQNDVPADEMSSDDYYEQDGEDQSDSLHYRGLN 179
>emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]
Length = 626
Score = 66.2 bits (160), Expect = 8e-09
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -1
Query: 604 KDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELN 482
++V+ Q+G DVPADEMSSDDYYEQDGE+QSDSL+YR LN
Sbjct: 180 REVDKVQKGQNDVPADEMSSDDYYEQDGEDQSDSLHYRGLN 220
>gb|EXB55506.1| Chromodomain-helicase-DNA-binding protein 1 [Morus notabilis]
Length = 1754
Score = 65.9 bits (159), Expect = 1e-08
Identities = 35/79 (44%), Positives = 44/79 (55%)
Frame = -1
Query: 634 RSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXXX 455
R SED +G K GQ+G DV DEM SD+YYEQDG+EQSDS+NYR +
Sbjct: 90 RLDSEDDDGPKYAGKGQQGPSDVATDEMLSDEYYEQDGKEQSDSVNYRGFHNSTVSNSRP 149
Query: 454 XXXXXXVNNNTSRSSKKVN 398
N N R+S+ +N
Sbjct: 150 QLKPAAFNKNIVRASRIMN 168
>ref|XP_007141483.1| hypothetical protein PHAVU_008G199800g [Phaseolus vulgaris]
gi|561014616|gb|ESW13477.1| hypothetical protein
PHAVU_008G199800g [Phaseolus vulgaris]
Length = 1759
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1
Query: 634 RSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNY 494
R S+D +GQK+ G RG DVPA+EM SD+YYEQDGEEQSDS++Y
Sbjct: 143 RLDSDDDDGQKEEGKGPRGLSDVPAEEMLSDEYYEQDGEEQSDSIHY 189
>ref|XP_006349779.1| PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform
X1 [Solanum tuberosum] gi|565366197|ref|XP_006349780.1|
PREDICTED: chromodomain-helicase-DNA-binding protein
1-like isoform X2 [Solanum tuberosum]
gi|565366199|ref|XP_006349781.1| PREDICTED:
chromodomain-helicase-DNA-binding protein 1-like isoform
X3 [Solanum tuberosum]
Length = 1707
Score = 63.9 bits (154), Expect = 4e-08
Identities = 49/183 (26%), Positives = 73/183 (39%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELNXXXXXXXX 458
D+ SED QKD+ + VPADEM SD+YYEQDG++QSDSL+YR N
Sbjct: 121 DQLESEDEGRQKDMGKSR----SVPADEMLSDEYYEQDGDDQSDSLHYRAANPSSGYSSK 176
Query: 457 XXXXXXXVNNNTSRSSKKVNXXXXXXXXXXXXXXXXXXXXXXXXXPNNGGNVRSTRNKXX 278
+ SR +K + G + ++K
Sbjct: 177 PQSRPVSASKYASRKAKASKDQDDNEYADYEDDDSEDEDDPDDPDYGSTGRGKGIKDK-D 235
Query: 277 XXXXXXXXXXXXXXXXXXXXXXXDTDHIRKPHRRGRGKAEHSLKSVREQKSFSTHSRQRR 98
D ++ RKP + + + HS+KS R +S +T +RQ+R
Sbjct: 236 DDWEGGESDEVNSDDDEVGISDEDEEYCRKPQGKQKNRGGHSVKSTRVVRSLATSARQKR 295
Query: 97 WKT 89
+T
Sbjct: 296 GRT 298
>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
[Medicago truncatula]
Length = 2083
Score = 63.9 bits (154), Expect = 4e-08
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = -1
Query: 637 DRSGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYR 491
++ GSED +GQKD GQRG DVPA+EM SDD Y QDGEEQ +S++ R
Sbjct: 123 EKLGSEDEDGQKDSGKGQRGDSDVPAEEMLSDDSYGQDGEEQGESVHSR 171
>dbj|BAJ95080.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1731
Score = 63.2 bits (152), Expect = 7e-08
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = -1
Query: 631 SGSEDHEGQKDVEDGQRGHVDVPADEMSSDDYYEQDGEEQSDSLNYRELN 482
S +D +G D ++ RGH DVPA+EM SDDYYEQD EEQSDSLN R ++
Sbjct: 118 SSHDDMDGSGDDDELNRGHGDVPAEEMLSDDYYEQDREEQSDSLNRRGMS 167