BLASTX nr result

ID: Sinomenium22_contig00038027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00038027
         (444 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis]            42   5e-07

>gb|EXB93216.1| Poly(rC)-binding protein 1 [Morus notabilis]
          Length = 462

 Score = 42.0 bits (97), Expect(2) = 5e-07
 Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
 Frame = +2

Query: 299 PSAGTTILSQLLVAIPQAGR---PKGIAIKYIQESHNTDV*VLAPEDLPVF 442
           P AG  + ++LLVA  QAG     +G  +K IQES N  V VL  EDLP+F
Sbjct: 156 PPAGAKVSTRLLVAASQAGSLIGKQGGTVKSIQESSNCIVRVLGSEDLPIF 206



 Score = 37.4 bits (85), Expect(2) = 5e-07
 Identities = 16/28 (57%), Positives = 20/28 (71%)
 Frame = +3

Query: 231 PKSRDVLLRVHRQTVEGLDGDLSQVPAP 314
           P + D LLRVH++ V+GLDGD S  P P
Sbjct: 130 PPAMDGLLRVHKRIVDGLDGDSSHAPPP 157


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