BLASTX nr result
ID: Sinomenium22_contig00037296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00037296
(720 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc... 248 1e-63
gb|AGQ44775.1| general transcription factor [Camellia sinensis] 239 5e-61
emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera] 226 5e-57
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc... 218 2e-54
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc... 218 2e-54
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr... 217 3e-54
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr... 217 3e-54
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc... 214 2e-53
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc... 214 3e-53
ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prun... 203 5e-50
ref|XP_002310512.2| transcription factor-related family protein ... 196 5e-48
ref|NP_175971.3| probable RNA polymerase II transcription factor... 196 7e-48
ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arab... 193 4e-47
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps... 192 1e-46
gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus... 191 2e-46
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A... 190 4e-46
ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transc... 184 3e-44
ref|XP_002530618.1| TFIIH basal transcription factor complex sub... 182 8e-44
ref|XP_002307021.1| transcription factor-related family protein ... 180 5e-43
ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutr... 179 6e-43
>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1 [Vitis vinifera]
gi|296090002|emb|CBI39821.3| unnamed protein product
[Vitis vinifera]
Length = 602
Score = 248 bits (634), Expect = 1e-63
Identities = 124/165 (75%), Positives = 137/165 (83%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LST++AYGSLR IS+IK+ GL DP+V P+ A+KVLNGLTQ++SS K+HLGKNPQESVLD
Sbjct: 438 LSTQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLD 497
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP TKEELLHHWTSIQELL+HFWSSYPITTTYLYTK SRLKDAM+ IYPKLQ IKESV
Sbjct: 498 RLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESV 557
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
QSDFRHQVSLLVQPM KRSAR+GERPNGFV
Sbjct: 558 QSDFRHQVSLLVQPMLQALDAAFAHYDADQQKRSARSGERPNGFV 602
>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
Length = 340
Score = 239 bits (611), Expect = 5e-61
Identities = 119/165 (72%), Positives = 132/165 (80%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LST +AYGSLR+ IS+IK GL DP+V PE A KV NGLTQ++SS KYHLGKNPQESVLD
Sbjct: 176 LSTSEAYGSLRECISEIKIAGLSDPIVKPEIAFKVFNGLTQNISSTKYHLGKNPQESVLD 235
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP+ TK+ELLHHWTSIQELLKHFWSSYPITT+YLY KV RLKDAM+ IYPKLQ IKESV
Sbjct: 236 RLPNITKDELLHHWTSIQELLKHFWSSYPITTSYLYVKVGRLKDAMSQIYPKLQEIKESV 295
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
QSDFRHQVSLLVQPM KRSA+ G+R NG+V
Sbjct: 296 QSDFRHQVSLLVQPMLQALDAAFARYDADLQKRSAKGGDRTNGYV 340
>emb|CAN79528.1| hypothetical protein VITISV_026261 [Vitis vinifera]
Length = 735
Score = 226 bits (577), Expect = 5e-57
Identities = 110/135 (81%), Positives = 123/135 (91%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LS+++AYGSLR IS+IK+ GL DP+V P+ A+KVLNGLTQ++SS K+HLGKNPQESVLD
Sbjct: 481 LSSQEAYGSLRGFISEIKSVGLSDPIVKPDIALKVLNGLTQNISSTKFHLGKNPQESVLD 540
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP TKEELLHHWTSIQELL+HFWSSYPITTTYLYTK SRLKDAM+ IYPKLQ IKESV
Sbjct: 541 RLPIITKEELLHHWTSIQELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESV 600
Query: 362 QSDFRHQVSLLVQPM 406
QSDFRHQVSLLVQPM
Sbjct: 601 QSDFRHQVSLLVQPM 615
>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum tuberosum]
Length = 599
Score = 218 bits (555), Expect = 2e-54
Identities = 108/165 (65%), Positives = 129/165 (78%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
+S E+A+ SL+ IS+I ++GL +P+++PE A+KV NGL+Q++SS KY+LGKNP ESVLD
Sbjct: 435 VSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNGLSQNISSTKYYLGKNPHESVLD 494
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
+LP TK ELL HWTSIQELLKHFWSSYPITT Y Y KV+RLKDAM+ IYPKLQ IKESV
Sbjct: 495 QLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESV 554
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
QSD RHQVSLLVQPM KRSA++GERPNGFV
Sbjct: 555 QSDVRHQVSLLVQPMLQALDAAFAHYDADIQKRSAKSGERPNGFV 599
>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Solanum lycopersicum]
Length = 599
Score = 218 bits (554), Expect = 2e-54
Identities = 109/165 (66%), Positives = 128/165 (77%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
+S E+A+ SL+ IS+I ++GL +P+++PE A+KV N L+Q++SS KYHLGKNP ESVLD
Sbjct: 435 VSKEEAFCSLKDSISEINSQGLIEPIISPEVALKVFNLLSQNISSTKYHLGKNPHESVLD 494
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
+LP TK ELL HWTSIQELLKHFWSSYPITT Y Y KV+RLKDAM+ IYPKLQ IKESV
Sbjct: 495 QLPSATKNELLLHWTSIQELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESV 554
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
QSD RHQVSLLVQPM KRSAR+GERPNGFV
Sbjct: 555 QSDVRHQVSLLVQPMLQALDAAFAHYDADLQKRSARSGERPNGFV 599
>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555944|gb|ESR65958.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 564
Score = 217 bits (553), Expect = 3e-54
Identities = 104/165 (63%), Positives = 132/165 (80%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LS ++AYGS+R IS+IK GL DP+VNPE A+KV +GLT ++SS KYHLGKNP+E+VLD
Sbjct: 400 LSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLD 459
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP TKE+LL+HW SIQELLKHFWSSYPITT YLY+KV+RLKDA+++IYP+L+ +KES+
Sbjct: 460 RLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESL 519
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
+D RHQVSLLV+PM KRSA++GE+PNG+V
Sbjct: 520 PADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 564
>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
gi|557555943|gb|ESR65957.1| hypothetical protein
CICLE_v10007802mg [Citrus clementina]
Length = 597
Score = 217 bits (553), Expect = 3e-54
Identities = 104/165 (63%), Positives = 132/165 (80%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LS ++AYGS+R IS+IK GL DP+VNPE A+KV +GLT ++SS KYHLGKNP+E+VLD
Sbjct: 433 LSRQEAYGSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLD 492
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP TKE+LL+HW SIQELLKHFWSSYPITT YLY+KV+RLKDA+++IYP+L+ +KES+
Sbjct: 493 RLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESL 552
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
+D RHQVSLLV+PM KRSA++GE+PNG+V
Sbjct: 553 PADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYV 597
>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B subunit
1-1-like [Cucumis sativus]
Length = 729
Score = 214 bits (546), Expect = 2e-53
Identities = 106/164 (64%), Positives = 127/164 (77%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LST +AYGSLR+ IS+IK+ G P++ PE A+ V NGLTQ++SS KY LGKNPQES+L+
Sbjct: 565 LSTTEAYGSLRESISEIKSSGFNHPIIKPEVALMVYNGLTQNISSTKYQLGKNPQESILE 624
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
LP+ TKEELLHHW SIQELLKHFWSSYPITT+YLYTKVSRLKDAMA IY +L+ IKE+V
Sbjct: 625 SLPNPTKEELLHHWISIQELLKHFWSSYPITTSYLYTKVSRLKDAMAKIYRQLEEIKETV 684
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGF 493
+DFRHQVSLLV+PM KRS ++GER NG+
Sbjct: 685 VADFRHQVSLLVRPMHQALDAAFQHHDADMQKRSVKSGERLNGY 728
>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Citrus sinensis]
Length = 597
Score = 214 bits (544), Expect = 3e-53
Identities = 102/165 (61%), Positives = 131/165 (79%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LS ++AY S+R IS+IK GL DP+VNPE A+KV +GLT ++SS KYHLGKNP+E+VLD
Sbjct: 433 LSKQEAYRSVRDAISEIKDMGLSDPIVNPEVALKVYSGLTHNISSIKYHLGKNPRETVLD 492
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP TKE+LL+HW SIQELLKHFWSSYPITT YLY+KV+RLKDA+++IYP+L+ +KES+
Sbjct: 493 RLPSATKEKLLYHWMSIQELLKHFWSSYPITTPYLYSKVNRLKDALSNIYPQLEEMKESL 552
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
+D RHQVSLLV+PM KRSA++GE+PNG++
Sbjct: 553 PADLRHQVSLLVRPMQQALDAAIQHYDADLQKRSAKSGEKPNGYI 597
>ref|XP_007222888.1| hypothetical protein PRUPE_ppa003591mg [Prunus persica]
gi|462419824|gb|EMJ24087.1| hypothetical protein
PRUPE_ppa003591mg [Prunus persica]
Length = 563
Score = 203 bits (516), Expect = 5e-50
Identities = 107/164 (65%), Positives = 125/164 (76%), Gaps = 1/164 (0%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
L+TE+AYGSLR+ IS IK+ GL + V PE A+ VLNGLTQ++SS KY LGKNPQ+SVLD
Sbjct: 401 LTTEEAYGSLREAISKIKSIGLKNSTVAPEIAITVLNGLTQNISSTKYQLGKNPQDSVLD 460
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
LP++TKEELLHHW SIQELL+HFWSSYPITTTYL TKV RLKDAM+ IY +L+ IK
Sbjct: 461 SLPNKTKEELLHHWISIQELLRHFWSSYPITTTYLSTKVGRLKDAMSQIYRQLEEIK--- 517
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARA-GERPNG 490
QSDFRHQVSLLV+PM KR+AR+ GE PNG
Sbjct: 518 QSDFRHQVSLLVRPMHQALDAAFQHFDADLQKRAARSGGETPNG 561
>ref|XP_002310512.2| transcription factor-related family protein [Populus trichocarpa]
gi|550334091|gb|EEE90962.2| transcription factor-related
family protein [Populus trichocarpa]
Length = 603
Score = 196 bits (499), Expect = 5e-48
Identities = 101/164 (61%), Positives = 121/164 (73%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LS E++Y SLR IS IK GL DP++ PE AVKVL+ LT ++SS KY GKN SVLD
Sbjct: 439 LSAEESYASLRDSISLIKTTGLVDPIIKPEVAVKVLSVLTHNISSTKYDTGKNHGLSVLD 498
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
LP+ KEELL+HWTS+QELLKH+WSSYPITTTYLYTKVSRLKDAM+ I +LQ +KESV
Sbjct: 499 TLPNTIKEELLYHWTSLQELLKHYWSSYPITTTYLYTKVSRLKDAMSKIDSQLQELKESV 558
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGF 493
QSD RHQV+LL++PM KRSAR+G+R NG+
Sbjct: 559 QSDLRHQVTLLLRPMQQALEAAMQHYDAELQKRSARSGDRSNGY 602
>ref|NP_175971.3| probable RNA polymerase II transcription factor B subunit 1-1
[Arabidopsis thaliana]
gi|122215373|sp|Q3ECP0.1|TFB1A_ARATH RecName:
Full=Probable RNA polymerase II transcription factor B
subunit 1-1; AltName: Full=General transcription and DNA
repair factor IIH subunit TFB1-1; Short=AtTFB1-1;
Short=TFIIH subunit TFB1-1 gi|110741140|dbj|BAE98663.1|
hypothetical protein [Arabidopsis thaliana]
gi|332195172|gb|AEE33293.1| probable RNA polymerase II
transcription factor B subunit 1-1 [Arabidopsis
thaliana]
Length = 591
Score = 196 bits (498), Expect = 7e-48
Identities = 94/164 (57%), Positives = 124/164 (75%)
Frame = +2
Query: 5 STEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLDR 184
+ +AYG L++ I +I+A GL DP++ PE + +V + LT+ +++AK GKNP+ES LDR
Sbjct: 428 NVHEAYGLLKESILEIRATGLSDPLIKPEVSFEVFSSLTRTIATAKNINGKNPRESFLDR 487
Query: 185 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 364
LP TK+E+LHHWTSIQELLKHFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KESVQ
Sbjct: 488 LPKSTKDEVLHHWTSIQELLKHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQ 547
Query: 365 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
SD RHQVSLLV+PM +R+A++GERPNG+V
Sbjct: 548 SDLRHQVSLLVRPMQQALDAAFHHYEVDLQRRTAKSGERPNGYV 591
>ref|XP_002894525.1| hypothetical protein ARALYDRAFT_892577 [Arabidopsis lyrata subsp.
lyrata] gi|297340367|gb|EFH70784.1| hypothetical protein
ARALYDRAFT_892577 [Arabidopsis lyrata subsp. lyrata]
Length = 592
Score = 193 bits (491), Expect = 4e-47
Identities = 94/165 (56%), Positives = 125/165 (75%), Gaps = 1/165 (0%)
Frame = +2
Query: 5 STEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLDR 184
+ +AYG L++ I +I+A GL DP++ PE + +V + LT+ +S+AK +GKNP+ES LDR
Sbjct: 428 NVHEAYGLLKESILEIRATGLSDPLIRPEVSFEVFSSLTRTISTAKNIIGKNPRESFLDR 487
Query: 185 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 364
LP TK+E+LHHWTSIQELL+HFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KESVQ
Sbjct: 488 LPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQ 547
Query: 365 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARA-GERPNGFV 496
SD RHQVSLLV+PM +R+A++ GERPNG+V
Sbjct: 548 SDLRHQVSLLVRPMQQALDAAFQHYEADLQRRTAKSGGERPNGYV 592
>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
gi|482575779|gb|EOA39966.1| hypothetical protein
CARUB_v10008654mg [Capsella rubella]
Length = 593
Score = 192 bits (488), Expect = 1e-46
Identities = 92/166 (55%), Positives = 126/166 (75%), Gaps = 2/166 (1%)
Frame = +2
Query: 5 STEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLDR 184
+ +A+G L++ I +I+A+GL DP++ PE + +V + LT+ +S+AK +GKNP+ES LDR
Sbjct: 428 NVHEAFGLLKESIVEIRARGLSDPLIKPEVSFEVFSSLTRTISTAKNIIGKNPRESFLDR 487
Query: 185 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 364
LP TK+E+LHHWTSIQELL+HFWSSYPITTTYL+TKV +LKDAM++ Y KL+ +KESVQ
Sbjct: 488 LPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSKLEAMKESVQ 547
Query: 365 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARA--GERPNGFV 496
SD RHQ+SLLV+PM +R+A++ GERPNG+V
Sbjct: 548 SDLRHQISLLVRPMQQALDAAFQHYEADLQRRTAKSSGGERPNGYV 593
>gb|EYU33732.1| hypothetical protein MIMGU_mgv1a007394mg [Mimulus guttatus]
Length = 409
Score = 191 bits (486), Expect = 2e-46
Identities = 93/135 (68%), Positives = 112/135 (82%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
+S+ +AYGSL+ L+S + GL +PV++ E A+KVL+ LTQ++SS K+HLG NP ESVLD
Sbjct: 253 VSSHEAYGSLKNLVSHNRVMGLTEPVMSHEVALKVLSALTQNISSTKFHLGSNPHESVLD 312
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP TK+ELL WTS+QELLKHFWSSYPITT YLYTKV+R+KDAM+ IY KLQ IKESV
Sbjct: 313 RLPKSTKDELLIQWTSVQELLKHFWSSYPITTKYLYTKVTRMKDAMSQIYLKLQEIKESV 372
Query: 362 QSDFRHQVSLLVQPM 406
SDFRHQVSLLV PM
Sbjct: 373 PSDFRHQVSLLVHPM 387
>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
gi|548861733|gb|ERN19104.1| hypothetical protein
AMTR_s00061p00135540 [Amborella trichopoda]
Length = 626
Score = 190 bits (483), Expect = 4e-46
Identities = 93/135 (68%), Positives = 111/135 (82%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LST+QAY SLR I ++K+ G DP+V P+ A+KVLN + Q LSS LGKNPQ +VLD
Sbjct: 442 LSTKQAYESLRAQILEVKSVGFKDPIVIPDLALKVLNDVNQQLSSTDPQLGKNPQATVLD 501
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
LPHRTKEELL HWTSIQELL+HFWSSYP+TTT+L+ KV+R+KDAMA IY KL +KESV
Sbjct: 502 MLPHRTKEELLQHWTSIQELLRHFWSSYPLTTTFLHAKVNRVKDAMAQIYRKLPEVKESV 561
Query: 362 QSDFRHQVSLLVQPM 406
QS+FRHQVSLLV+PM
Sbjct: 562 QSEFRHQVSLLVKPM 576
>ref|XP_004496077.1| PREDICTED: probable RNA polymerase II transcription factor B
subunit 1-1-like [Cicer arietinum]
Length = 586
Score = 184 bits (466), Expect = 3e-44
Identities = 95/165 (57%), Positives = 118/165 (71%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
L +E+AYGSLR+ IS IKA GL DP+++PE A KVLNGLT+++SS K HLGK+ QESVLD
Sbjct: 423 LGSEEAYGSLRESISKIKAIGLMDPLLSPEVAFKVLNGLTKNISSTKSHLGKSSQESVLD 482
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
LP+ TKE+LL HW QELL+HFWSSYP+TT L K R+KDA++ IY KL+ IK S
Sbjct: 483 ILPNTTKEKLLDHWVCSQELLRHFWSSYPVTTQNLVNKTKRMKDAISQIYSKLEEIKVSA 542
Query: 362 QSDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGFV 496
+SD RHQVSL+V PM KR+AR G +PNG+V
Sbjct: 543 KSDLRHQVSLVVHPMQQALDAALLHYDADVRKRNAR-GTKPNGYV 586
>ref|XP_002530618.1| TFIIH basal transcription factor complex subunit, putative [Ricinus
communis] gi|223529828|gb|EEF31761.1| TFIIH basal
transcription factor complex subunit, putative [Ricinus
communis]
Length = 597
Score = 182 bits (463), Expect = 8e-44
Identities = 97/165 (58%), Positives = 117/165 (70%), Gaps = 1/165 (0%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LS+++AY SLR I+ KA GL DP+V PE A KVL+ LT ++SS KYHLGKN +ESVLD
Sbjct: 435 LSSQEAYASLRDSITQTKAMGLNDPIVKPEIATKVLSILTHNISSTKYHLGKNSRESVLD 494
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
RLP+ KEELLHHW SI+ELL+H+WSSYPITT YLY KVSRLKDAM+ I +LQ +KESV
Sbjct: 495 RLPNTIKEELLHHWMSIEELLRHYWSSYPITTAYLYAKVSRLKDAMSKIDSQLQEMKESV 554
Query: 362 QSDFR-HQVSLLVQPMXXXXXXXXXXXXXXXXKRSARAGERPNGF 493
QSD H SL + P KRSA++ ERPNG+
Sbjct: 555 QSDLXFHATSLGIVP---ALEAAMQHYDADLQKRSAKSAERPNGY 596
>ref|XP_002307021.1| transcription factor-related family protein [Populus trichocarpa]
gi|222856470|gb|EEE94017.1| transcription factor-related
family protein [Populus trichocarpa]
Length = 586
Score = 180 bits (456), Expect = 5e-43
Identities = 90/135 (66%), Positives = 107/135 (79%)
Frame = +2
Query: 2 LSTEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLD 181
LS E++Y SLR IS IK GL DP+V PE A KVL LT ++SS KY LGKNP SVLD
Sbjct: 432 LSVEESYASLRDSISHIKNTGLVDPMVTPEVAAKVLLVLTHNISSTKYDLGKNPGLSVLD 491
Query: 182 RLPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESV 361
LP+ KEEL++HWTS+QELL+H+WSSYPITT YLY KVSRLKDAM+ I +LQ +KESV
Sbjct: 492 TLPNSIKEELMYHWTSLQELLRHYWSSYPITTMYLYNKVSRLKDAMSKIDSQLQELKESV 551
Query: 362 QSDFRHQVSLLVQPM 406
QSD RHQV+LL++PM
Sbjct: 552 QSDLRHQVTLLIRPM 566
>ref|XP_006392607.1| hypothetical protein EUTSA_v10011333mg [Eutrema salsugineum]
gi|557089185|gb|ESQ29893.1| hypothetical protein
EUTSA_v10011333mg [Eutrema salsugineum]
Length = 597
Score = 179 bits (455), Expect = 6e-43
Identities = 90/169 (53%), Positives = 120/169 (71%), Gaps = 5/169 (2%)
Frame = +2
Query: 5 STEQAYGSLRKLISDIKAKGLPDPVVNPETAVKVLNGLTQHLSSAKYHLGKNPQESVLDR 184
+ +AYG L++ I +I+ KGL P++ E + +V + LTQ +S+AK +GKNP+ES LDR
Sbjct: 429 NVHEAYGLLKESILEIRTKGLSYPLIKSEVSFEVFSSLTQTISTAKNIIGKNPRESFLDR 488
Query: 185 LPHRTKEELLHHWTSIQELLKHFWSSYPITTTYLYTKVSRLKDAMADIYPKLQGIKESVQ 364
LP TK+E+LHHWTSIQELL+HFWSSYPITTTYL+TKV +LKDAM++ Y +L +K+SVQ
Sbjct: 489 LPKSTKDEVLHHWTSIQELLRHFWSSYPITTTYLHTKVGKLKDAMSNTYSQLDAMKQSVQ 548
Query: 365 SDFRHQVSLLVQPMXXXXXXXXXXXXXXXXKRSAR-----AGERPNGFV 496
SD RHQVSLLV+PM +R+A+ + ERPNG V
Sbjct: 549 SDLRHQVSLLVRPMQQALDAAFQHYETDLQRRTAKSVGGSSSERPNGGV 597