BLASTX nr result

ID: Sinomenium22_contig00036463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00036463
         (301 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305246.1| PREDICTED: putative disease resistance prote...    57   3e-06
ref|XP_006388709.1| hypothetical protein POPTR_0115s002602g, par...    55   8e-06
ref|XP_004305152.1| PREDICTED: putative disease resistance prote...    55   8e-06

>ref|XP_004305246.1| PREDICTED: putative disease resistance protein RGA4-like [Fragaria
           vesca subsp. vesca]
          Length = 984

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
 Frame = -3

Query: 299 LKIQGLENLKEW--APDARLXXXXXXXXXSFPVLEKLYISSCPSLTIMPTLFPSLKKLQV 126
           L I+  ENL EW  AP  R           FP LEKL +  C  LT  P+ FPSLKKL +
Sbjct: 504 LHIEKAENLIEWMEAPSER------GSRVVFPCLEKLTLIHCEKLTSAPSHFPSLKKLVI 557

Query: 125 YDSN-------SMVVVKLGTISKLASLEIDGISDLTDLPQGLLRNN 9
            D         S++  +L T++ L+ L + G   LT LP+G+L NN
Sbjct: 558 QDMRNGGTPLASILSNQLTTLTYLSLLHVGG---LTCLPEGMLENN 600


>ref|XP_006388709.1| hypothetical protein POPTR_0115s002602g, partial [Populus
           trichocarpa] gi|550310691|gb|ERP47623.1| hypothetical
           protein POPTR_0115s002602g, partial [Populus
           trichocarpa]
          Length = 468

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/99 (30%), Positives = 53/99 (53%)
 Frame = -3

Query: 299 LKIQGLENLKEWAPDARLXXXXXXXXXSFPVLEKLYISSCPSLTIMPTLFPSLKKLQVYD 120
           L    +E L++WA              +FP L +L ++ CP L  +P + PS+K L++  
Sbjct: 219 LTFYSMEGLEQWAA------------CTFPRLRELRVACCPVLNEIP-IIPSVKSLEIRR 265

Query: 119 SNSMVVVKLGTISKLASLEIDGISDLTDLPQGLLRNNNL 3
            N+  ++ +  ++ + SL I GI D+ +LP G L+N+ L
Sbjct: 266 GNASSLMSVRNLTSITSLRIKGIDDVRELPDGFLQNHTL 304


>ref|XP_004305152.1| PREDICTED: putative disease resistance protein RGA1-like [Fragaria
            vesca subsp. vesca]
          Length = 1314

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
 Frame = -3

Query: 299  LKIQGLENLKEWAPDARLXXXXXXXXXSFPVLEKLYISSCPSLTIMPTLFPSLKKLQVYD 120
            L+I+  ENL +W               +FP LEKL +  C  L   P+ FPSLKKL++ +
Sbjct: 800  LRIEEAENLTDWVETR-------GTLRAFPCLEKLTLVKCKQLRSTPSRFPSLKKLKIRE 852

Query: 119  SNSMVVVKLGTISKLASLEIDGISD---LTDLPQGLLRNN 9
             +S + +      +L SL   GI D   L  LP+G LRNN
Sbjct: 853  VDSGIPIASILSYELTSLTHLGIHDVEGLASLPEGTLRNN 892


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