BLASTX nr result
ID: Sinomenium22_contig00036218
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00036218
(448 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prun... 79 6e-13
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s... 78 1e-12
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s... 77 2e-12
gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Mor... 77 2e-12
ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phas... 77 2e-12
ref|XP_001751839.1| predicted protein [Physcomitrella patens] gi... 77 2e-12
ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III s... 77 3e-12
ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III s... 77 3e-12
gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg... 76 5e-12
gb|EMS65056.1| hypothetical protein TRIUR3_25018 [Triticum urartu] 75 7e-12
ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III s... 75 9e-12
ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polype... 75 9e-12
gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aeg... 75 1e-11
ref|XP_003629061.1| DNA-directed RNA polymerase III subunit RPC8... 75 1e-11
ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III s... 74 2e-11
ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III s... 74 3e-11
ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-contai... 74 3e-11
dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare] 74 3e-11
gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Tri... 73 4e-11
ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp.... 73 5e-11
>ref|XP_007218416.1| hypothetical protein PRUPE_ppa011518mg [Prunus persica]
gi|462414878|gb|EMJ19615.1| hypothetical protein
PRUPE_ppa011518mg [Prunus persica]
Length = 207
Score = 79.0 bits (193), Expect = 6e-13
Identities = 30/55 (54%), Positives = 45/55 (81%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWWV 284
+EL I+ ++I+F++ S+ +PPIP+E +D+KPFAPM +T SID DGLGP++WWV
Sbjct: 141 EELVIDGIDQIKFQVHSVNFPPIPIEQPEDSKPFAPMVVTGSIDFDGLGPVSWWV 195
>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 77.8 bits (190), Expect = 1e-12
Identities = 30/50 (60%), Positives = 42/50 (84%)
Frame = -1
Query: 436 IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
I+ +EIRF++QS+ YPPIP+E K++KPFAPM I S+D+DGLGP++WW
Sbjct: 143 IDGIDEIRFQVQSVSYPPIPVEQPKESKPFAPMVIMGSLDYDGLGPVSWW 192
>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
product [Vitis vinifera]
Length = 192
Score = 77.4 bits (189), Expect = 2e-12
Identities = 30/50 (60%), Positives = 42/50 (84%)
Frame = -1
Query: 436 IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
I+ +EIRF++QS+ YPPIP+E K++KPFAPM I S+D+DGLGP++WW
Sbjct: 143 IDGLDEIRFQVQSVSYPPIPVEQPKESKPFAPMMIMGSLDYDGLGPVSWW 192
>gb|EXB26576.1| DNA-directed RNA polymerase III subunit rpc8 [Morus notabilis]
Length = 200
Score = 77.0 bits (188), Expect = 2e-12
Identities = 30/50 (60%), Positives = 41/50 (82%)
Frame = -1
Query: 436 IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
I+ +EIRF++ S+ YPPIP+E K++KPFAPM IT S+D DGLGP++WW
Sbjct: 143 IDGEDEIRFQVHSVNYPPIPVEQPKESKPFAPMVITGSLDCDGLGPVSWW 192
>ref|XP_007134115.1| hypothetical protein PHAVU_010G020200g [Phaseolus vulgaris]
gi|561007160|gb|ESW06109.1| hypothetical protein
PHAVU_010G020200g [Phaseolus vulgaris]
Length = 215
Score = 77.0 bits (188), Expect = 2e-12
Identities = 29/53 (54%), Positives = 42/53 (79%)
Frame = -1
Query: 445 ELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
E I+ + I+FR+Q++ YP IP+E K++KPFAPM +T S+DHDGLGP++WW
Sbjct: 153 EYPIQETDVIKFRVQNVSYPQIPVEQPKESKPFAPMLVTGSLDHDGLGPVSWW 205
>ref|XP_001751839.1| predicted protein [Physcomitrella patens]
gi|162696937|gb|EDQ83274.1| predicted protein
[Physcomitrella patens]
Length = 189
Score = 77.0 bits (188), Expect = 2e-12
Identities = 31/46 (67%), Positives = 39/46 (84%)
Frame = -1
Query: 424 EEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
E++RFR+ +KYPPIP+E EKDA+PFAPMAIT I+ DGLG +AWW
Sbjct: 143 EDVRFRVVQVKYPPIPIEQEKDARPFAPMAITGDINADGLGLVAWW 188
>ref|XP_004515171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
isoform X1 [Cicer arietinum]
gi|502172669|ref|XP_004515172.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC8-like isoform X2 [Cicer
arietinum]
Length = 196
Score = 76.6 bits (187), Expect = 3e-12
Identities = 28/50 (56%), Positives = 42/50 (84%)
Frame = -1
Query: 436 IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
I++ +EI+F++QS+ YPPIP+E K++KPFAPM + S+D DGLGP++WW
Sbjct: 147 IDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPMLVYGSLDQDGLGPVSWW 196
>ref|XP_004514743.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Cicer
arietinum]
Length = 196
Score = 76.6 bits (187), Expect = 3e-12
Identities = 28/50 (56%), Positives = 42/50 (84%)
Frame = -1
Query: 436 IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
I++ +EI+F++QS+ YPPIP+E K++KPFAPM + S+D DGLGP++WW
Sbjct: 147 IDSSDEIKFQVQSVSYPPIPVEQPKESKPFAPMLVYGSLDQDGLGPVSWW 196
>gb|EMT04694.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
Length = 271
Score = 75.9 bits (185), Expect = 5e-12
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
DEL ++ +EIRF + SIKYPPIP+E ++D KPFAPM I SI DGLG +AWW
Sbjct: 197 DELHLDTDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWW 250
>gb|EMS65056.1| hypothetical protein TRIUR3_25018 [Triticum urartu]
Length = 177
Score = 75.5 bits (184), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
DEL ++ +EIRF + SIKYPPIP+E ++D KPFAPM I SI DGLG IAWW
Sbjct: 101 DELHLDIDDEIRFLVSSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLIAWW 154
>ref|XP_004242644.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum lycopersicum]
Length = 193
Score = 75.1 bits (183), Expect = 9e-12
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 2/57 (3%)
Frame = -1
Query: 448 DELS--IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWWV 284
DEL I+ +EIRF++ ++ YP +PLE +KD+KPFAPM I S+D DGLGPI+WW+
Sbjct: 137 DELDYPIDGIDEIRFQVHNVSYPSMPLEQDKDSKPFAPMVIKGSLDADGLGPISWWI 193
>ref|XP_002520987.1| DNA-directed RNA polymerase III 25 kD polypeptide, putative
[Ricinus communis] gi|223539824|gb|EEF41404.1|
DNA-directed RNA polymerase III 25 kD polypeptide,
putative [Ricinus communis]
Length = 194
Score = 75.1 bits (183), Expect = 9e-12
Identities = 31/53 (58%), Positives = 43/53 (81%)
Frame = -1
Query: 445 ELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
E +I+ +EI+FR+ S+KYPP+PLE ++ KPFAPM IT SID +GLGP++WW
Sbjct: 144 EFNIDGLDEIKFRVDSVKYPPVPLEQQE--KPFAPMVITGSIDDEGLGPVSWW 194
>gb|EMT18324.1| DNA-directed RNA polymerase III subunit RPC8 [Aegilops tauschii]
Length = 223
Score = 74.7 bits (182), Expect = 1e-11
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWWV 284
DEL ++ +EIRF SIKYPPIP+E ++D KPFAPM I SI DGLG +AWWV
Sbjct: 123 DELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWWV 177
>ref|XP_003629061.1| DNA-directed RNA polymerase III subunit RPC8 [Medicago truncatula]
gi|355523083|gb|AET03537.1| DNA-directed RNA polymerase
III subunit RPC8 [Medicago truncatula]
Length = 191
Score = 74.7 bits (182), Expect = 1e-11
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
DE +IE EIRF++ S+ YP IP+E K++KPFAPM + S+ H+GLGP++WW
Sbjct: 137 DEFNIEISNEIRFQVLSVSYPTIPVEQAKESKPFAPMVVNGSLYHEGLGPVSWW 190
>ref|XP_003580811.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Brachypodium distachyon]
Length = 200
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
DEL ++ +EIRF + SIKYPPIP+E ++D KPFAPM I SI DGLG +AWW
Sbjct: 134 DELYLDLDDEIRFLVASIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWW 187
>ref|XP_006343568.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
[Solanum tuberosum]
Length = 193
Score = 73.6 bits (179), Expect = 3e-11
Identities = 31/57 (54%), Positives = 43/57 (75%), Gaps = 2/57 (3%)
Frame = -1
Query: 448 DELS--IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWWV 284
DEL I+ +EIRF++ ++ YP +PLE +KD+ PFAPM I S+D DGLGPI+WW+
Sbjct: 137 DELDYPIDGVDEIRFQVHNVSYPSMPLEQDKDSNPFAPMVIKGSLDADGLGPISWWI 193
>ref|XP_007050414.1| RNA polymerase Rpb7 N-terminal domain-containing protein [Theobroma
cacao] gi|508702675|gb|EOX94571.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Theobroma cacao]
Length = 210
Score = 73.6 bits (179), Expect = 3e-11
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = -1
Query: 436 IENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
I+ ++I+FR+ S+ YP IPLE +++KPFAPM IT SID+DGLGP++WW
Sbjct: 151 IDGMDQIKFRVHSVIYPSIPLEQPENSKPFAPMVITGSIDYDGLGPVSWW 200
>dbj|BAK08181.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/54 (59%), Positives = 41/54 (75%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
DEL ++ +EIRF + SIKYPPIP+E ++D +PFAPM I SI DGLG +AWW
Sbjct: 134 DELPLDIDDEIRFLVSSIKYPPIPVEQKEDDRPFAPMQINGSIKGDGLGLLAWW 187
>gb|EMS46002.1| DNA-directed RNA polymerase III subunit RPC8 [Triticum urartu]
Length = 200
Score = 73.2 bits (178), Expect = 4e-11
Identities = 33/54 (61%), Positives = 40/54 (74%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
DEL ++ +EIRF SIKYPPIP+E ++D KPFAPM I SI DGLG +AWW
Sbjct: 122 DELHLDIDDEIRFLASSIKYPPIPVEQKEDDKPFAPMQINGSIKGDGLGLLAWW 175
>ref|XP_002889618.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335460|gb|EFH65877.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 204
Score = 72.8 bits (177), Expect = 5e-11
Identities = 27/54 (50%), Positives = 42/54 (77%)
Frame = -1
Query: 448 DELSIENGEEIRFRIQSIKYPPIPLEPEKDAKPFAPMAITASIDHDGLGPIAWW 287
++ I++ +I+FR++SI YP +P E +DAKPFAPM +T ++D DGLGP++WW
Sbjct: 141 EDFIIDDSCQIKFRVESISYPSVPTERAEDAKPFAPMVVTGNMDEDGLGPVSWW 194