BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00036185
         (614 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   225   9e-57
ref|XP_002512123.1| pentatricopeptide repeat-containing protein,...   222   6e-56
ref|XP_007045956.1| Pentatricopeptide repeat superfamily protein...   213   4e-53
ref|XP_007226957.1| hypothetical protein PRUPE_ppa002695mg [Prun...   211   1e-52
ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containi...   211   1e-52
ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containi...   211   1e-52
ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citr...   211   1e-52
ref|XP_007158618.1| hypothetical protein PHAVU_002G167800g [Phas...   207   3e-51
ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containi...   203   3e-50
ref|XP_002316102.2| pentatricopeptide repeat-containing family p...   202   6e-50
ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containi...   200   2e-49
ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   198   9e-49
ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group] g...   194   2e-47
ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containi...   192   5e-47
ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [S...   187   2e-45
ref|XP_003607763.1| Pentatricopeptide repeat-containing protein ...   187   3e-45
dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]    186   6e-45
ref|XP_006656717.1| PREDICTED: pentatricopeptide repeat-containi...   184   2e-44
ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Caps...   183   4e-44
gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]        182   9e-44

>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  225 bits (573), Expect = 9e-57
 Identities = 109/189 (57%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           T  NALV +YAKC MIG+A  +F  + DKDV+ WNS+ISG +QNGYA+EAL LF  MR  
Sbjct: 374 TFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSD 433

Query: 228 TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
           +   DAIT+VSV            G +LH YA+K G LS +V+V TALLN Y+ CGD+  
Sbjct: 434 SVYPDAITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAES 493

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR +F+EMGEKNT+TWSAM+ GYG+ GD + S  LFG +L+E LEPNEV+FT+ILSACSH
Sbjct: 494 ARVIFDEMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSH 553

Query: 588 TGRIGEAWR 614
           +G +GE WR
Sbjct: 554 SGMLGEGWR 562



 Score =  115 bits (287), Expect = 1e-23
 Identities = 69/179 (38%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
           LV +YAKCR + ++  +F+ I D++VV W SMI G  QN    E LVLF  MR      +
Sbjct: 178 LVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGN 237

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
             T+ S+            G  +H Y +K GF   N F+ T LL+LY  CGD   A  VF
Sbjct: 238 QYTLGSLVTACTKLGALHQGKWVHGYVIKSGF-DLNSFLVTPLLDLYFKCGDIRDAFSVF 296

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E+   + V+W+AM+ GY   G   E+  LF     ++L PN V  +S+LSAC+ TG +
Sbjct: 297 DELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSACAQTGSL 355



 Score =  102 bits (255), Expect = 7e-20
 Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 3/184 (1%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-D 242
           L+ LY KC  I +A  +F+ +S  D+V W +MI G +Q GY  EAL LF   R+   L +
Sbjct: 279 LLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPN 338

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            +T  SV            G ++H   +K G  S +     AL+++Y+ C   G AR VF
Sbjct: 339 TVTTSSVLSACAQTGSLNMGRSVHCLGIKLG--SEDATFENALVDMYAKCHMIGDARYVF 396

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTG--R 596
             + +K+ + W+++++GY  +G A E+  LF ++  +++ P+ +   S+LSAC+  G  R
Sbjct: 397 ETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVGAYR 456

Query: 597 IGEA 608
           +G +
Sbjct: 457 VGSS 460



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 2/180 (1%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTM--RYTFSL 239
           LV LY     +  A  +F+ I + D+  W  MI     N    E +  + T   +     
Sbjct: 77  LVSLYGSFGHVECARLMFDRIRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCLNEY 136

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           D +    V            G  LH   +K G  S + FV T L+++Y+ C +   +RRV
Sbjct: 137 DNVVFSIVLKACSELRETDEGRKLHCQIVKVG--SPDSFVLTGLVDMYAKCREVEDSRRV 194

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           F+E+ ++N V W++M+ GY  +    E   LF ++    +E N+    S+++AC+  G +
Sbjct: 195 FDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGAL 254


>ref|XP_002512123.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549303|gb|EEF50792.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  222 bits (566), Expect = 6e-56
 Identities = 110/192 (57%), Positives = 140/192 (72%), Gaps = 1/192 (0%)
 Frame = +3

Query: 39  FHAKTMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRT 218
           F   T+ NALVH+YAKC M  +AS +F   S+KDVV WNS+ISGCSQ G  +EAL LF+ 
Sbjct: 236 FAEPTLMNALVHMYAKCHMNRDASYLFETASEKDVVSWNSIISGCSQMGSPYEALDLFQR 295

Query: 219 MRY-TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCG 395
           MR  + S DA+T+VSV            G +LHAY++KEG LSSNV+V+TALL  Y+ CG
Sbjct: 296 MRKESVSPDAVTLVSVFSACASLGALQVGSSLHAYSVKEGLLSSNVYVSTALLTFYAKCG 355

Query: 396 DSGYARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILS 575
           D+G AR +F+ M EKNTVTWSAM+ GYG+ GDA  S ++F  +LR+ L+PNEV+FT+ILS
Sbjct: 356 DAGSARTIFDGMQEKNTVTWSAMIGGYGVQGDAGGSLSIFNDMLRQELKPNEVIFTTILS 415

Query: 576 ACSHTGRIGEAW 611
           ACSHTG +GE W
Sbjct: 416 ACSHTGMVGEGW 427



 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 53/183 (28%), Positives = 101/183 (55%), Gaps = 1/183 (0%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF 233
           +  AL+ +Y KC +I +A  +F+ +S  D+V W +MI G +Q+  +++AL LF   ++  
Sbjct: 141 LMTALLDMYVKCGVIRDARSVFDELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWAG 200

Query: 234 SL-DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYA 410
            L + +T+VS             G ++H  A+K GF    +    AL+++Y+ C  +  A
Sbjct: 201 ILPNDVTIVSALAACARMGNLNLGRSIHGLAIKLGFAEPTLM--NALVHMYAKCHMNRDA 258

Query: 411 RRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHT 590
             +F    EK+ V+W+++++G    G   E+ +LF ++ +E++ P+ V   S+ SAC+  
Sbjct: 259 SYLFETASEKDVVSWNSIISGCSQMGSPYEALDLFQRMRKESVSPDAVTLVSVFSACASL 318

Query: 591 GRI 599
           G +
Sbjct: 319 GAL 321



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 60/179 (33%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY-TFSLD 242
           L   YAKC  I  + C F+   D++VV W SMI G  QN    E L+LF  MR      +
Sbjct: 44  LTDFYAKCGEIECSRCAFDENLDRNVVSWTSMIVGYVQNDCPVEGLILFNRMREGLIEGN 103

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
             T+  +            G   H YA+K G +  N ++ TALL++Y  CG    AR VF
Sbjct: 104 QFTLGILVTACTKLGALHQGKCFHGYAIKSG-VQLNSYLMTALLDMYVKCGVIRDARSVF 162

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E+   + V+W+AM+ GY     + ++  LF       + PN+V   S L+AC+  G +
Sbjct: 163 DELSSIDLVSWTAMIVGYTQSNLSYDALKLFLDKKWAGILPNDVTIVSALAACARMGNL 221


>ref|XP_007045956.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508709891|gb|EOY01788.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 714

 Score =  213 bits (542), Expect = 4e-53
 Identities = 104/189 (55%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           T+ NALV +YAKC MIG+A  IF  +SDK+++ WNS+ISG SQNG A+EA  LF  MR  
Sbjct: 388 TVINALVDMYAKCGMIGDARYIFETVSDKNIIAWNSIISGYSQNGSAYEAFELFHQMRSK 447

Query: 228 TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
           + S DA+T+VS+            G +LHAY+ K G LSS+V+V TA+LN Y+  GDS  
Sbjct: 448 SVSPDAVTVVSIFSACASLGALQVGSSLHAYSTKGGLLSSSVYVGTAVLNFYAKSGDSKS 507

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR +F+ MGEKNTVTWSAM+ GYG+ GD++ S  LF  +++EN+EPNEV+FT+ILSAC H
Sbjct: 508 ARAIFDSMGEKNTVTWSAMIGGYGIQGDSSGSLALFNDMVKENVEPNEVIFTTILSACGH 567

Query: 588 TGRIGEAWR 614
           TG +GE W+
Sbjct: 568 TGSLGEGWK 576



 Score =  115 bits (288), Expect = 1e-23
 Identities = 61/179 (34%), Positives = 103/179 (57%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-D 242
           L+ +Y KC  I +A  +F+ +S  D+V W +MI G SQ+G+  EAL LF   ++   L +
Sbjct: 293 LLDMYVKCGSIRDARSVFDELSSVDLVSWTAMIVGYSQSGFPDEALKLFIDKKWFGILPN 352

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
           A+T+ S+           FG  +HA  ++ G   S V    AL+++Y+ CG  G AR +F
Sbjct: 353 AVTIASLLSACAQLSNLSFGRLVHALGIQLGLKDSTVI--NALVDMYAKCGMIGDARYIF 410

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
             + +KN + W+++++GY  +G A E+F LF ++  +++ P+ V   SI SAC+  G +
Sbjct: 411 ETVSDKNIIAWNSIISGYSQNGSAYEAFELFHQMRSKSVSPDAVTVVSIFSACASLGAL 469



 Score =  105 bits (263), Expect = 8e-21
 Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF 233
           ++  LV +YAKC  I  +  +F+ I D++VV W SMI+G  QN  A +ALVLF  MR   
Sbjct: 188 VQTGLVDMYAKCGEIECSRKVFSEIIDRNVVSWTSMIAGYVQNDCAEDALVLFNRMREAM 247

Query: 234 -SLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYA 410
              +  T+ S+            G  +H Y +K G +  N +  T LL++Y  CG    A
Sbjct: 248 VEGNEFTLGSLVTACGKLGALHQGKWVHGYVIKNG-IELNSYSVTTLLDMYVKCGSIRDA 306

Query: 411 RRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHT 590
           R VF+E+   + V+W+AM+ GY   G  +E+  LF       + PN V   S+LSAC+  
Sbjct: 307 RSVFDELSSVDLVSWTAMIVGYSQSGFPDEALKLFIDKKWFGILPNAVTIASLLSACAQL 366

Query: 591 GRI 599
             +
Sbjct: 367 SNL 369



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-D 242
           LV LY     IG A  +F+ I D D   W  MI     N    E +  +  MR +  + D
Sbjct: 92  LVSLYGLFGHIGCARLMFDQIPDPDFYSWKVMIRWYFLNDLCMEIIGFYARMRMSVRMCD 151

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            +    V            G  +H   +K G  + + FV T L+++Y+ CG+   +R+VF
Sbjct: 152 NVVFSVVLKACSEMRDIDEGRKVHCQIVKAG--NPDSFVQTGLVDMYAKCGEIECSRKVF 209

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E+ ++N V+W++M+AGY  +  A ++  LF ++    +E NE    S+++AC   G +
Sbjct: 210 SEIIDRNVVSWTSMIAGYVQNDCAEDALVLFNRMREAMVEGNEFTLGSLVTACGKLGAL 268


>ref|XP_007226957.1| hypothetical protein PRUPE_ppa002695mg [Prunus persica]
           gi|462423893|gb|EMJ28156.1| hypothetical protein
           PRUPE_ppa002695mg [Prunus persica]
          Length = 644

 Score =  211 bits (538), Expect = 1e-52
 Identities = 107/189 (56%), Positives = 137/189 (72%), Gaps = 1/189 (0%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           T+RNALV +YAKC MIG+A  IF  I DK+V+ WNS+ISG SQNG A+EAL LF  MR  
Sbjct: 318 TVRNALVDMYAKCHMIGDARYIFETILDKNVIAWNSIISGYSQNGSAYEALQLFHQMRSE 377

Query: 228 TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
           +FS DA T+ SV            G +LHA++LK+G L+SN++V TALLNLY+ CGD+  
Sbjct: 378 SFSHDAFTLASVLSACTTLGFLSVGSSLHAHSLKDGLLTSNIYVGTALLNLYAKCGDAES 437

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR VF+ MG KNTVTWSAM+ GYG+ GD+  S  LF  +L+++LEP EV+FT++LSACSH
Sbjct: 438 ARLVFDGMGVKNTVTWSAMIGGYGVQGDSRGSLALFSDMLKKHLEPTEVIFTTLLSACSH 497

Query: 588 TGRIGEAWR 614
           TG + E  R
Sbjct: 498 TGMVEEGRR 506



 Score =  103 bits (256), Expect = 5e-20
 Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-D 242
           LV +YAKC  I  +  +F+ I D +VV W SMI G  QN    + LVLF  MR      +
Sbjct: 122 LVDVYAKCGWIECSRAVFDGIVDGNVVCWTSMIVGYVQNDCPQDGLVLFNRMREELIKGN 181

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
             T+ SV            G  +H + +K G   S+ F+ T+LL++Y  CGD  YAR +F
Sbjct: 182 QFTLGSVLTACTKLRALHQGKWIHGHLIKTGIEVSS-FLVTSLLDMYVKCGDIRYARSIF 240

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHT 590
           +E+   + V+W+AM+ GY   G  +E+  LF       L PN +   S+LS+C+ +
Sbjct: 241 DELPAIDLVSWTAMIVGYTQSGCPDEALKLFTDEKWVGLLPNSITTASVLSSCAQS 296



 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 1/178 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL- 239
           +L+ +Y KC  I  A  IF+ +   D+V W +MI G +Q+G   EAL LF   ++   L 
Sbjct: 222 SLLDMYVKCGDIRYARSIFDELPAIDLVSWTAMIVGYTQSGCPDEALKLFTDEKWVGLLP 281

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           ++IT  SV            G ++H   +K G   S   V  AL+++Y+ C   G AR +
Sbjct: 282 NSITTASVLSSCAQSCNLNLGRSIHGLGIKLGLEDST--VRNALVDMYAKCHMIGDARYI 339

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTG 593
           F  + +KN + W+++++GY  +G A E+  LF ++  E+   +     S+LSAC+  G
Sbjct: 340 FETILDKNVIAWNSIISGYSQNGSAYEALQLFHQMRSESFSHDAFTLASVLSACTTLG 397



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 1/177 (0%)
 Frame = +3

Query: 57  RNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF- 233
           R  L+ LY     +  A  +F+ +   D   W  M+     +    E +  + +MR    
Sbjct: 19  RTKLISLYGSFGYVKCARLLFDQMPSPDFYSWKVMLRWYFMHNLYAEVMGFYTSMRICVR 78

Query: 234 SLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYAR 413
             D +    V            G  +H   +K    S + FV T L+++Y+ CG    +R
Sbjct: 79  EHDNVVFSIVLKACSELRDFNEGRKVHCQIVKVA--SPDSFVLTGLVDVYAKCGWIECSR 136

Query: 414 RVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            VF+ + + N V W++M+ GY  +    +   LF ++  E ++ N+    S+L+AC+
Sbjct: 137 AVFDGIVDGNVVCWTSMIVGYVQNDCPQDGLVLFNRMREELIKGNQFTLGSVLTACT 193


>ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 597

 Score =  211 bits (537), Expect = 1e-52
 Identities = 106/190 (55%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           T+ NALV +YAKC +I +A  IF   S+KDV+ WNS+ISG SQNG A+ +L LF  MR  
Sbjct: 270 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGYSQNGPAYASLELFHQMRLD 329

Query: 228 -TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSG 404
              S DA+T+VSV            G +LHAY+ K+G LSSNV+V TALLN Y+ CGD+ 
Sbjct: 330 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 389

Query: 405 YARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            AR VF+ M EKNTVTWSAM+ GYGM GD   S  LF  +L E ++PNEV+FT+ILSACS
Sbjct: 390 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 449

Query: 585 HTGRIGEAWR 614
           HTG +GE W+
Sbjct: 450 HTGMVGEGWK 459



 Score =  112 bits (280), Expect = 9e-23
 Identities = 70/179 (39%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
           LV +YAKCR IG +  +F+   DK+VV W SMI+G  QN  A E LVLF  MR  F   +
Sbjct: 74  LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 133

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            IT+ S+            G  LH Y LK G +  N  + TALL++Y  CG+   AR VF
Sbjct: 134 QITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVF 192

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E+   + V+W+AM+ GY   G  +++  LF      +  PN V   S+LSA +  G +
Sbjct: 193 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 251



 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT-FSL 239
           AL+ +Y KC  I +A  +F+ +   D+V W +MI G +Q+GY  +AL LF   ++  F  
Sbjct: 174 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 233

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           + +T+ SV            G  +H+  ++ G    +  V  AL+++Y+ C     AR +
Sbjct: 234 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYI 291

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKL-LRENLEPNEVVFTSILSACSHTGR 596
           F    EK+ + W+++++GY  +G A  S  LF ++ L +N+ P+ V   S++SAC+  G 
Sbjct: 292 FETTSEKDVIAWNSIISGYSQNGPAYASLELFHQMRLDDNVSPDAVTLVSVISACASLGA 351

Query: 597 I 599
           +
Sbjct: 352 V 352



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 34/95 (35%), Positives = 58/95 (61%)
 Frame = +3

Query: 300 GCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVFNEMGEKNTVTWSAMMAGYG 479
           G  +H   +K G   S  FV T L+++Y+ C D G +R+VF+E  +KN V+W++M+AGY 
Sbjct: 53  GMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYV 110

Query: 480 MHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            +  A E   LF ++    +E N++   S+++AC+
Sbjct: 111 QNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 145


>ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 709

 Score =  211 bits (537), Expect = 1e-52
 Identities = 106/190 (55%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           T+ NALV +YAKC +I +A  IF   S+KDV+ WNS+ISG SQNG A+ +L LF  MR  
Sbjct: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGYSQNGPAYASLELFHQMRLD 441

Query: 228 -TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSG 404
              S DA+T+VSV            G +LHAY+ K+G LSSNV+V TALLN Y+ CGD+ 
Sbjct: 442 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 501

Query: 405 YARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            AR VF+ M EKNTVTWSAM+ GYGM GD   S  LF  +L E ++PNEV+FT+ILSACS
Sbjct: 502 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 561

Query: 585 HTGRIGEAWR 614
           HTG +GE W+
Sbjct: 562 HTGMVGEGWK 571



 Score =  112 bits (280), Expect = 9e-23
 Identities = 70/179 (39%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
           LV +YAKCR IG +  +F+   DK+VV W SMI+G  QN  A E LVLF  MR  F   +
Sbjct: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            IT+ S+            G  LH Y LK G +  N  + TALL++Y  CG+   AR VF
Sbjct: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVF 304

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E+   + V+W+AM+ GY   G  +++  LF      +  PN V   S+LSA +  G +
Sbjct: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363



 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT-FSL 239
           AL+ +Y KC  I +A  +F+ +   D+V W +MI G +Q+GY  +AL LF   ++  F  
Sbjct: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           + +T+ SV            G  +H+  ++ G    +  V  AL+++Y+ C     AR +
Sbjct: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYI 403

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKL-LRENLEPNEVVFTSILSACSHTGR 596
           F    EK+ + W+++++GY  +G A  S  LF ++ L +N+ P+ V   S++SAC+  G 
Sbjct: 404 FETTSEKDVIAWNSIISGYSQNGPAYASLELFHQMRLDDNVSPDAVTLVSVISACASLGA 463

Query: 597 I 599
           +
Sbjct: 464 V 464



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-D 242
           LV +Y     +  A  +F+ + + D   +  MI     N    + +  ++ MR      D
Sbjct: 86  LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
                 V            G  +H   +K G   S  FV T L+++Y+ C D G +R+VF
Sbjct: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVF 203

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
           +E  +KN V+W++M+AGY  +  A E   LF ++    +E N++   S+++AC+
Sbjct: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257


>ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citrus clementina]
           gi|557540977|gb|ESR52021.1| hypothetical protein
           CICLE_v10033606mg [Citrus clementina]
          Length = 716

 Score =  211 bits (537), Expect = 1e-52
 Identities = 106/190 (55%), Positives = 132/190 (69%), Gaps = 2/190 (1%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           T+ NALV +YAKC +I +A  IF   S+KDV+ WNS+ISG SQNG A+ +L LF  MR  
Sbjct: 382 TVINALVDMYAKCHVIADARYIFETTSEKDVIAWNSIISGYSQNGPAYASLELFHQMRLD 441

Query: 228 -TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSG 404
              S DA+T+VSV            G +LHAY+ K+G LSSNV+V TALLN Y+ CGD+ 
Sbjct: 442 DNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTKQGLLSSNVYVGTALLNFYAKCGDAQ 501

Query: 405 YARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            AR VF+ M EKNTVTWSAM+ GYGM GD   S  LF  +L E ++PNEV+FT+ILSACS
Sbjct: 502 SARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSLALFSDMLNEEVQPNEVIFTTILSACS 561

Query: 585 HTGRIGEAWR 614
           HTG +GE W+
Sbjct: 562 HTGMVGEGWK 571



 Score =  112 bits (280), Expect = 9e-23
 Identities = 70/179 (39%), Positives = 97/179 (54%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
           LV +YAKCR IG +  +F+   DK+VV W SMI+G  QN  A E LVLF  MR  F   +
Sbjct: 186 LVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGN 245

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            IT+ S+            G  LH Y LK G +  N  + TALL++Y  CG+   AR VF
Sbjct: 246 QITLGSLVTACAKLRALHQGKWLHGYILKIG-IEINSHLVTALLDMYVKCGNIRDARSVF 304

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E+   + V+W+AM+ GY   G  +++  LF      +  PN V   S+LSA +  G +
Sbjct: 305 DELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVLSASAQLGNL 363



 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 55/181 (30%), Positives = 98/181 (54%), Gaps = 2/181 (1%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT-FSL 239
           AL+ +Y KC  I +A  +F+ +   D+V W +MI G +Q+GY  +AL LF   ++  F  
Sbjct: 286 ALLDMYVKCGNIRDARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFP 345

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           + +T+ SV            G  +H+  ++ G    +  V  AL+++Y+ C     AR +
Sbjct: 346 NHVTIASVLSASAQLGNLNMGRMVHSLGIRLGL--EDYTVINALVDMYAKCHVIADARYI 403

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKL-LRENLEPNEVVFTSILSACSHTGR 596
           F    EK+ + W+++++GY  +G A  S  LF ++ L +N+ P+ V   S++SAC+  G 
Sbjct: 404 FETTSEKDVIAWNSIISGYSQNGPAYASLELFHQMRLDDNVSPDAVTLVSVISACASLGA 463

Query: 597 I 599
           +
Sbjct: 464 V 464



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 1/174 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-D 242
           LV +Y     +  A  +F+ + + D   +  MI     N    + +  ++ MR      D
Sbjct: 86  LVSMYGSFGHVKYARSVFDSMPNPDFYSFQVMIRWYFLNDLYKDIVEFYKCMRKRLKEHD 145

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
                 V            G  +H   +K G   S  FV T L+++Y+ C D G +R+VF
Sbjct: 146 NFVFSKVLKACCELRDIDEGMKVHCEIVKVGGPDS--FVLTGLVDMYAKCRDIGSSRQVF 203

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
           +E  +KN V+W++M+AGY  +  A E   LF ++    +E N++   S+++AC+
Sbjct: 204 DETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITLGSLVTACA 257


>ref|XP_007158618.1| hypothetical protein PHAVU_002G167800g [Phaseolus vulgaris]
           gi|561032033|gb|ESW30612.1| hypothetical protein
           PHAVU_002G167800g [Phaseolus vulgaris]
          Length = 702

 Score =  207 bits (526), Expect = 3e-51
 Identities = 104/188 (55%), Positives = 135/188 (71%), Gaps = 1/188 (0%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT- 230
           +RNALV +YAKC ++ +A  +F  I DKDVV WNS+ISGC+Q+G   EAL LF+ MR   
Sbjct: 379 VRNALVDMYAKCGLVLDARNVFESI-DKDVVSWNSIISGCAQSGEECEALELFKRMRLEL 437

Query: 231 FSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYA 410
           FS DA+T+V V           FGC++HA +LK+G + S+++V TALLN Y+ CGD+  A
Sbjct: 438 FSPDAVTVVGVLSACASLGALQFGCSVHALSLKDGLVLSSIYVGTALLNFYAKCGDAKAA 497

Query: 411 RRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHT 590
           R VF+ MGEKN VTW AM++GYGMHGD N S  LF  +L+E LEPNE VFT+IL+ACSH+
Sbjct: 498 RMVFDSMGEKNVVTWGAMISGYGMHGDGNGSLVLFRDMLKEELEPNEAVFTTILAACSHS 557

Query: 591 GRIGEAWR 614
           G +GE  R
Sbjct: 558 GMVGEGSR 565



 Score =  100 bits (248), Expect = 4e-19
 Identities = 67/179 (37%), Positives = 87/179 (48%), Gaps = 6/179 (3%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SL 239
           +LV  YAKC  +  A   F  I  +DVV W SMI    QN  A E L LF  M+  F   
Sbjct: 176 SLVDAYAKCGQLPHARRAFEEIPHRDVVSWTSMIVAYVQNECAREGLTLFNRMQEAFVHG 235

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           +  TM SV            G  +H + +K G +S N F+ T+LLN Y  CG  G AR V
Sbjct: 236 NEFTMGSVVSACTSLGWLHQGKWVHGFVIKNG-ISVNSFLTTSLLNFYVKCGSVGDARAV 294

Query: 420 FNE-----MGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSAC 581
           F+E        ++ V+W+AM+ GY   G    +  LF       L PN V  +S+LSAC
Sbjct: 295 FDESISSSYHHQDLVSWTAMIVGYTQRGYPGLAIELFKNEKWAGLLPNSVTISSLLSAC 353



 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 53/188 (28%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIF-----NMISDKDVVVWNSMISGCSQNGYAHEALVLFRT 218
           +  +L++ Y KC  +G+A  +F     +    +D+V W +MI G +Q GY   A+ LF+ 
Sbjct: 274 LTTSLLNFYVKCGSVGDARAVFDESISSSYHHQDLVSWTAMIVGYTQRGYPGLAIELFKN 333

Query: 219 MRYTFSL-DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCG 395
            ++   L +++T+ S+            G  LH + +K G    +  V  AL+++Y+ CG
Sbjct: 334 EKWAGLLPNSVTISSLLSACGQLCNSVMGKLLHCFVVKCGL--EDPPVRNALVDMYAKCG 391

Query: 396 DSGYARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILS 575
               AR VF  + +K+ V+W+++++G    G+  E+  LF ++  E   P+ V    +LS
Sbjct: 392 LVLDARNVFESI-DKDVVSWNSIISGCAQSGEECEALELFKRMRLELFSPDAVTVVGVLS 450

Query: 576 ACSHTGRI 599
           AC+  G +
Sbjct: 451 ACASLGAL 458



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 3/179 (1%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-- 239
           L+ LY    ++  A  +F+++  +D+  +  MI     N +    + ++R MR +     
Sbjct: 75  LLSLYGSFGVLHRARTLFDLLPSRDLYSFKVMIRTYFLNDHHSSVVSVYRLMRLSLHPTP 134

Query: 240 -DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
            D +    V                H +  K   L  + F+ T+L++ Y+ CG   +ARR
Sbjct: 135 HDHVLFSVVLKSCAETRDLLQAALTHCHLTKS--LPPDSFLLTSLVDAYAKCGQLPHARR 192

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTG 593
            F E+  ++ V+W++M+  Y  +  A E   LF ++    +  NE    S++SAC+  G
Sbjct: 193 AFEEIPHRDVVSWTSMIVAYVQNECAREGLTLFNRMQEAFVHGNEFTMGSVVSACTSLG 251


>ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Glycine max]
          Length = 699

 Score =  203 bits (517), Expect = 3e-50
 Identities = 100/188 (53%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT- 230
           +RNALV +YAKC ++ +A C+F  + +KDVV WNS+ISG  Q+G A+EAL LFR M    
Sbjct: 375 VRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLEL 434

Query: 231 FSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYA 410
           FS DA+T+V +            GC++H  ALK+G + S+++V TALLN Y+ CGD+  A
Sbjct: 435 FSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKCGDARAA 494

Query: 411 RRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHT 590
           R VF+ MGEKN VTW AM+ GYGM GD N S  LF  +L E +EPNEVVFT+IL+ACSH+
Sbjct: 495 RMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTILAACSHS 554

Query: 591 GRIGEAWR 614
           G +GE  R
Sbjct: 555 GMVGEGSR 562



 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 6/182 (3%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKD-VVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SL 239
           LV  YAK   + EA+  F+ I + D VV W SMI    QN  A E L LF  MR  F   
Sbjct: 173 LVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDG 232

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           +  T+ S+            G  +H + +K G +  N ++ T+LLN+Y  CG+   A +V
Sbjct: 233 NEFTVGSLVSACTKLNWLHQGKWVHGFVIKNG-ICVNSYLTTSLLNMYVKCGNIQDACKV 291

Query: 420 FNEMG----EKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           F+E      +++ V+W+AM+ GY   G  + +  LF       + PN V  +S+LS+C+ 
Sbjct: 292 FDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQ 351

Query: 588 TG 593
            G
Sbjct: 352 LG 353



 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF---S 236
           L+ LYA    +  A  IFN +  +D+  +  MI     N      + L+R MR +     
Sbjct: 71  LLSLYASFGQLRHARKIFNHLPTRDLYCFKVMIRAYFLNDTPSGVVSLYRLMRLSLHPTP 130

Query: 237 LDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
            D +    V                H + +K   L S+ FV T L++ Y+       A R
Sbjct: 131 HDYVLFSIVFKSCAESRDFQTLTITHCHFVKS--LPSDSFVLTCLVDAYAKFARVDEATR 188

Query: 417 VFNEMGEK-NTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            F+E+ E  + V+W++M+  Y  +  A E   LF ++    ++ NE    S++SAC+
Sbjct: 189 AFDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACT 245


>ref|XP_002316102.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550329982|gb|EEF02273.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 665

 Score =  202 bits (514), Expect = 6e-50
 Identities = 102/186 (54%), Positives = 130/186 (69%), Gaps = 1/186 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL 239
           N+LV  YAKC+M  +A  +F  ISD+DVV WNS+IS  SQNG A+EAL LF  MR    L
Sbjct: 342 NSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVL 401

Query: 240 -DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
            DA+T+VSV            G + HAYA+K G LSSNV+V TALL  Y+ CGD+  AR 
Sbjct: 402 PDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARV 461

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGR 596
           +F+ M +K+TVTWSAM++GYG+ G+   S ++FG +L+  L+PNE +FTSILSACSHTG 
Sbjct: 462 IFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGM 521

Query: 597 IGEAWR 614
           IGE WR
Sbjct: 522 IGEGWR 527



 Score = 99.8 bits (247), Expect = 6e-19
 Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
           LV +YAKC  I  +  +F+   D++V  W+SMI+G  QN  A + LVLF  MR      +
Sbjct: 143 LVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEAN 202

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            IT+  +            G  LH Y +K G +    ++ TALL+LY+ CG    AR VF
Sbjct: 203 QITLGILVHACKKLGALHQGKWLHGYLIKCG-IELGSYLVTALLDLYAKCGVVRDARSVF 261

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
           +E+   + V+W+AM+ GY  +G   E+  LF +  +  + PN+V   S+ S+CS
Sbjct: 262 DELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCS 315



 Score = 97.1 bits (240), Expect = 4e-18
 Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 1/175 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL- 239
           AL+ LYAKC ++ +A  +F+ +   D+V W +MI G +QNG   EAL LF        L 
Sbjct: 243 ALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLP 302

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           + +T+ SV            G ++H  ++K G  S +  V  +L++ Y+ C  +  AR V
Sbjct: 303 NDVTIASVFSSCSQLLNLNLGRSIHGLSIKLG--SRDPIVTNSLVDFYAKCQMNRDARYV 360

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
           F  + +++ V W+++++ +  +G A E+  LF ++   ++ P+ V   S+LSAC+
Sbjct: 361 FETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSACA 415



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFS-LD 242
           LV LY     +  A  +F+ I   D + W  +I     N    + +  +  MR      D
Sbjct: 43  LVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNSEFRDIVGFYNRMRVCLKECD 102

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            +    V            G  +H   +K G  + + FV T L+++Y+ CG+   +R VF
Sbjct: 103 NVVFSHVLKACSESRNFDEGRKVHCQIVKFG--NPDSFVFTGLVDMYAKCGEIECSRSVF 160

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E  ++N  +WS+M+AGY  +  A +   LF ++  E +E N++    ++ AC   G +
Sbjct: 161 DENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGAL 219


>ref|XP_004298396.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 706

 Score =  200 bits (509), Expect = 2e-49
 Identities = 100/189 (52%), Positives = 134/189 (70%), Gaps = 1/189 (0%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           ++RNALV +YAKC MI +A  IF+   DK+V+ W+S+I G SQNG A+EAL LF  MR  
Sbjct: 383 SVRNALVDMYAKCHMISDARYIFDTTLDKNVITWSSIICGYSQNGLAYEALQLFHQMRSE 442

Query: 228 TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
           +FS DA T+VSV            G ++HAY++K+G  +SN++  TALLN Y+ CGD+  
Sbjct: 443 SFSPDAFTLVSVLSACASLGFLQVGSSVHAYSIKDGISTSNLYAGTALLNFYAKCGDAES 502

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR VF+ M EK+++TWSAM+ GYG+ GD++ S  LF  +L+E LEPNEVVFT+ILSACSH
Sbjct: 503 ARLVFDGMKEKSSITWSAMIGGYGIQGDSSGSVELFNYMLKERLEPNEVVFTTILSACSH 562

Query: 588 TGRIGEAWR 614
           TG + E  R
Sbjct: 563 TGMVAEGMR 571



 Score =  103 bits (256), Expect = 5e-20
 Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
           L+ +YAKC  I  +  +F+ I D++VV W SMI G  QN    + LVLF  MR      +
Sbjct: 187 LLDVYAKCGWIEWSRRVFDGIVDRNVVCWTSMIFGYVQNECPEDGLVLFNRMREGMVEAN 246

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
             T+ SV            G  +H Y +K G   +NV V T+LL++Y  CGD   AR +F
Sbjct: 247 QFTLGSVLTACTKLRALHQGKWIHGYLIKNGIEVNNVLV-TSLLDMYVKCGDIRDARSIF 305

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTG 593
           +E    + V W+AM+ GY   G   E+  LF     + L PN +   S+LS+C+ +G
Sbjct: 306 DEHSMIDLVWWTAMIVGYTQSGCPLEALKLFTDKRWDGLLPNSITTASVLSSCAQSG 362



 Score =  100 bits (248), Expect = 4e-19
 Identities = 61/178 (34%), Positives = 96/178 (53%), Gaps = 1/178 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL- 239
           +L+ +Y KC  I +A  IF+  S  D+V W +MI G +Q+G   EAL LF   R+   L 
Sbjct: 287 SLLDMYVKCGDIRDARSIFDEHSMIDLVWWTAMIVGYTQSGCPLEALKLFTDKRWDGLLP 346

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           ++IT  SV            G ++H   +K G   S+  V  AL+++Y+ C     AR +
Sbjct: 347 NSITTASVLSSCAQSGDLNMGRSVHGLGIKLGLEESS--VRNALVDMYAKCHMISDARYI 404

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTG 593
           F+   +KN +TWS+++ GY  +G A E+  LF ++  E+  P+     S+LSAC+  G
Sbjct: 405 FDTTLDKNVITWSSIICGYSQNGLAYEALQLFHQMRSESFSPDAFTLVSVLSACASLG 462



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 1/174 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMR-YTFSLD 242
           L+ LYA    +  A  +F+ I   D     +M+     +    E L LFR MR +    D
Sbjct: 87  LISLYASFGRVDCARLVFDEIPSPDFYSSKAMVRWYFLHNLYGEVLGLFRRMRMWVRERD 146

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            +    V            G  +H   +K      + FV T LL++Y+ CG   ++RRVF
Sbjct: 147 NVVYSIVLKACSEARDVNEGRKVHCEIVKAA--CPDGFVLTGLLDVYAKCGWIEWSRRVF 204

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
           + + ++N V W++M+ GY  +    +   LF ++    +E N+    S+L+AC+
Sbjct: 205 DGIVDRNVVCWTSMIFGYVQNECPEDGLVLFNRMREGMVEANQFTLGSVLTACT 258


>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101216349
            [Cucumis sativus]
          Length = 1830

 Score =  198 bits (504), Expect = 9e-49
 Identities = 97/203 (47%), Positives = 139/203 (68%), Gaps = 1/203 (0%)
 Frame = +3

Query: 9    IPHS*IV*S*FHAKTMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGY 188
            +P+S ++   F      NAL+ +YAKC  I +A  IF+ + +KDV+ WNSMISG +QNG 
Sbjct: 1416 LPNSALLQVFFQRVRFLNALIDMYAKCHTISDAYAIFHGVLEKDVITWNSMISGYAQNGS 1475

Query: 189  AHEALVLFRTMR-YTFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVAT 365
            A++AL LF  MR Y+ + DAIT+VS             G +LHAY++K G  SSN+++ T
Sbjct: 1476 AYDALRLFNQMRSYSLAPDAITLVSTLSASATLGAIQVGSSLHAYSVKGGLFSSNLYIGT 1535

Query: 366  ALLNLYSMCGDSGYARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEP 545
            ALLN Y+ CGD+  AR VF+ MG KN +TWSAM+ GYG+ GD + S ++F  +L+E+L+P
Sbjct: 1536 ALLNFYAKCGDARSARMVFDSMGVKNIITWSAMIGGYGVQGDGSGSLSIFSNMLKEDLKP 1595

Query: 546  NEVVFTSILSACSHTGRIGEAWR 614
            NEV+FT++LSACS++G + E  R
Sbjct: 1596 NEVIFTTVLSACSYSGMVEEGGR 1618



 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 1/165 (0%)
 Frame = +3

Query: 66   LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
            L+ +Y KC  +  +S +F  I DK+VV W SMI+G  QN  A E LVLF  MR      +
Sbjct: 1258 LIDMYGKCGQVECSSAVFEEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESN 1317

Query: 243  AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
              T+ S+            G  +H YA+K      + F+AT  L++Y  CG +  AR ++
Sbjct: 1318 PFTLGSIINAFTKLRALHQGKWVHGYAIKN-IAELSSFLATTFLDMYVKCGQTRDARMIY 1376

Query: 423  NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVV 557
            +E+   + V+W+ M+ GY      N+   LF   +R +L PN  +
Sbjct: 1377 DELPTIDLVSWTVMIVGYTQARQPNDGLRLFADEIRSDLLPNSAL 1421



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
 Frame = +3

Query: 66   LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SLD 242
            LV +Y     +  A  +F+ + + D   W  MI     N    + +  +  MR +F   D
Sbjct: 1158 LVGVYGALGDVRSARMVFDQMPNPDFYAWKVMIRWYFLNDLFVDVIPFYNRMRMSFRECD 1217

Query: 243  AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
             I    +            G  +H   +K G   S  FV T L+++Y  CG    +  VF
Sbjct: 1218 NIIFSIILKACSELREIVEGRKVHCQIVKVGGPDS--FVMTGLIDMYGKCGQVECSSAVF 1275

Query: 423  NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
             E+ +KN V+W++M+AGY  +  A E   LF ++    +E N     SI++A
Sbjct: 1276 EEIMDKNVVSWTSMIAGYVQNNCAEEGLVLFNRMRDALVESNPFTLGSIINA 1327


>ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
           gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR)
           repeat-containing protein-like [Oryza sativa Japonica
           Group] gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza
           sativa Japonica Group] gi|125596287|gb|EAZ36067.1|
           hypothetical protein OsJ_20377 [Oryza sativa Japonica
           Group]
          Length = 673

 Score =  194 bits (492), Expect = 2e-47
 Identities = 100/183 (54%), Positives = 130/183 (71%), Gaps = 1/183 (0%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT- 230
           +RNALV +YAKC+ + EA+ IF  I  KDVV WNSM++G S+NG A+E+LVLF  MR   
Sbjct: 361 VRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQG 420

Query: 231 FSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYA 410
            S DAI++V+             G   H YA+K  F+S N++V TALLNLYS C D   A
Sbjct: 421 ISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMS-NIYVNTALLNLYSKCADLPSA 479

Query: 411 RRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHT 590
           +RVFN+M ++N+VTWSAM+ GYGM GD+  S +LF ++L+EN+ PNEVVFTSILSACSHT
Sbjct: 480 QRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHT 539

Query: 591 GRI 599
           G +
Sbjct: 540 GMV 542



 Score =  101 bits (252), Expect = 2e-19
 Identities = 62/174 (35%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY-TFS 236
           N+LV +YAK   +  A  +F+ + +++VV W SM+SG  QNG A E LVLF  MR     
Sbjct: 161 NSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVH 220

Query: 237 LDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
               TMVSV            G  +H   +K G LS+N F++ +LL++Y+ C     ARR
Sbjct: 221 PSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYG-LSTNSFISASLLDMYAKCEKVEDARR 279

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
           VF+E+   + V W+AM+ GY  +    ++  LF      ++ PN V   +++SA
Sbjct: 280 VFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISA 333



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 3/182 (1%)
 Frame = +3

Query: 57  RNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFS 236
           R  L+  YA    +  A  + +     D   +  M+      G   +A+ L R MR    
Sbjct: 58  RTKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCP 117

Query: 237 LDA---ITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
             A   + +              +G  LH   +K G   ++ FV  +L+++Y+  GD   
Sbjct: 118 AAAQADVVLSLALKACVRSADFRYGRRLHCDVVKAG--GADGFVMNSLVDMYAKAGDLEN 175

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR+VF+ + E+N V+W++M++G   +G A E   LF ++ ++N+ P+E    S+L+AC+ 
Sbjct: 176 ARKVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAM 235

Query: 588 TG 593
            G
Sbjct: 236 LG 237


>ref|XP_004514248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cicer arietinum]
          Length = 1334

 Score =  192 bits (489), Expect = 5e-47
 Identities = 99/189 (52%), Positives = 129/189 (68%), Gaps = 1/189 (0%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           ++RNALV +YAKC +  +A  +F    DKDVV WNS+ISG +Q+G A+EAL LF  MR  
Sbjct: 372 SLRNALVDMYAKCGLSFDARYVFETTVDKDVVSWNSVISGYAQSGSAYEALDLFHRMRLE 431

Query: 228 TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
           +FS DA+T+V V            G +LHA+A K G +S +++V TALLN Y+ CG++  
Sbjct: 432 SFSPDAVTVVGVLSACASVGALQIGSSLHAFAFKYGLVSCSIYVGTALLNFYAKCGEANL 491

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR VF+ MGEKN VTWSAM+ G GM GD   S  LF  +L+E L PNEVVFT+IL+ACSH
Sbjct: 492 ARMVFDTMGEKNAVTWSAMIGGCGMQGDGVGSLALFRDMLKEKLVPNEVVFTTILAACSH 551

Query: 588 TGRIGEAWR 614
           +G +GE  R
Sbjct: 552 SGMVGEGLR 560



 Score =  107 bits (268), Expect = 2e-21
 Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 8/189 (4%)
 Frame = +3

Query: 51   TMRNALVHLYAKCRMIGEASCIFNMIS---DKDVVVWNSMISGCSQNGYAHEALVLFRTM 221
            ++   LV L+ K   + ++   F  IS    + VV WN+MIS   QNG   E L LFR M
Sbjct: 975  SVNTVLVFLFGKWGNVEKSREKFEQISAAGKRGVVPWNAMISAYVQNGCPLEGLNLFRAM 1034

Query: 222  --RYTFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALK---EGFLSSNVFVATALLNLYS 386
                T   + ITMVSV            GC +H Y +    +G + SN  +AT+L+++YS
Sbjct: 1035 VEEQTSRPNHITMVSVLSACAQIGDLSLGCWVHEYLISIGHKGTIGSNQILATSLIDMYS 1094

Query: 387  MCGDSGYARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTS 566
             CG    A+ VF     K+ V ++AM+ G  ++G+  ++  LF K+    L+PN   F  
Sbjct: 1095 KCGSLDRAKEVFEHAISKDVVLFNAMIMGLAVNGEGEDALRLFYKMTEYGLQPNAGTFLG 1154

Query: 567  ILSACSHTG 593
             LSACSH+G
Sbjct: 1155 ALSACSHSG 1163



 Score =  105 bits (261), Expect = 1e-20
 Identities = 59/188 (31%), Positives = 100/188 (53%), Gaps = 6/188 (3%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMIS-----DKDVVVWNSMISGCSQNGYAHEALVLFRT 218
           +  +L+++Y KC  IG+A  +F+  S     D D+V W +MI G +Q GY   AL LF  
Sbjct: 268 LATSLLNMYVKCGDIGDARYVFDEFSISNFDDDDLVFWTAMIVGYTQRGYPQAALELFTD 327

Query: 219 MR-YTFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCG 395
            + Y    +++T+ S+            G +LH   +K G       +  AL+++Y+ CG
Sbjct: 328 KKWYRILPNSVTLASLLSACAQLENIVMGKSLHVLVVKYGL--DGTSLRNALVDMYAKCG 385

Query: 396 DSGYARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILS 575
            S  AR VF    +K+ V+W+++++GY   G A E+ +LF ++  E+  P+ V    +LS
Sbjct: 386 LSFDARYVFETTVDKDVVSWNSVISGYAQSGSAYEALDLFHRMRLESFSPDAVTVVGVLS 445

Query: 576 ACSHTGRI 599
           AC+  G +
Sbjct: 446 ACASVGAL 453



 Score =  102 bits (255), Expect = 7e-20
 Identities = 67/185 (36%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SL 239
           +LV  Y+KC  +  A  +F+ I D+ +V W SMI    QN  A E L+LF  MR  F   
Sbjct: 170 SLVDAYSKCGELHYARKVFDEIPDRTIVSWTSMIVAYVQNDCAEEGLMLFNRMREGFVDG 229

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           +  T+ S+            G  +H Y +K G +  N F+AT+LLN+Y  CGD G AR V
Sbjct: 230 NLFTVGSLVTACTKLGCLHQGKWVHGYVIKNG-IQINSFLATSLLNMYVKCGDIGDARYV 288

Query: 420 FNEMGEKN-----TVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
           F+E    N      V W+AM+ GY   G    +  LF       + PN V   S+LSAC+
Sbjct: 289 FDEFSISNFDDDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACA 348

Query: 585 HTGRI 599
               I
Sbjct: 349 QLENI 353



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT--FSL 239
           L+ LYA    +  A  +F+ +   ++  +  +I     N      +  +   R T  F  
Sbjct: 70  LLSLYASFGFLRYARTLFHRLPSHNLYSFKLIIRWHFLNDIHSYVVSFYHLARLTLGFFN 129

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           D +    +               LH + LK    S + FV T+L++ YS CG+  YAR+V
Sbjct: 130 DLVVFSILLKASSHLRDLVLTTRLHCHILKAN--SPDSFVLTSLVDAYSKCGELHYARKV 187

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTG 593
           F+E+ ++  V+W++M+  Y  +  A E   LF ++    ++ N     S+++AC+  G
Sbjct: 188 FDEIPDRTIVSWTSMIVAYVQNDCAEEGLMLFNRMREGFVDGNLFTVGSLVTACTKLG 245



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 41/160 (25%), Positives = 84/160 (52%), Gaps = 3/160 (1%)
 Frame = +3

Query: 114  IFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTM-RYTFSLDAITMVSVXXXXXXXXX 290
            +F+ + + ++  +N++I   ++ G+      LF  + R +   + +T+  +         
Sbjct: 786  VFHQLQNPNIFPFNAIIRILAEQGHFFHVFSLFNCLKRRSLFPNDLTLSFLLKACFKSKD 845

Query: 291  XXFGCTLHAYALKEGFLSSNVFVATALLNLYSM-CGDSGYARRVFNEMGEKNTVT-WSAM 464
                  +HA+ LK G+LS + FV   L+ +Y+    +   AR+VF+E+ +K+ V+ W+++
Sbjct: 846  THCVEQVHAHILKMGYLS-DTFVTNGLVAVYAKGFNNLVSARKVFDEIPDKSAVSCWTSL 904

Query: 465  MAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            + GY   G + E   +F  ++R+N+ P      S+LSACS
Sbjct: 905  ITGYAQSGQSEEVLQVFHAMIRQNMCPQNDTMVSVLSACS 944


>ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
           gi|241914836|gb|EER87980.1| hypothetical protein
           SORBIDRAFT_10g005800 [Sorghum bicolor]
          Length = 683

 Score =  187 bits (475), Expect = 2e-45
 Identities = 95/186 (51%), Positives = 129/186 (69%), Gaps = 1/186 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-S 236
           NALV +YAKC+ + EA+ IF  IS+KDVV WNSM+SG ++N   ++AL+LF+ M     S
Sbjct: 373 NALVDMYAKCQAVSEANRIFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPS 432

Query: 237 LDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
            DAI++V              G + H YA+K  FLS N++V+TALLNLY+ CGD   ARR
Sbjct: 433 PDAISVVHALSASVCLGDLLIGKSFHGYAVKHAFLS-NIYVSTALLNLYNKCGDLPSARR 491

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGR 596
           VF+EM ++N+VTW AM+ GYGM GD+  S +LFG++L++ + PN+V FTSILS CSHTG 
Sbjct: 492 VFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGM 551

Query: 597 IGEAWR 614
           +  A R
Sbjct: 552 VTAAKR 557



 Score =  103 bits (258), Expect = 3e-20
 Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY-TFS 236
           N+LV +YAK   +  A  +F  I  ++VV W SM+SGC QNG+A + L+LF  MR     
Sbjct: 171 NSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVP 230

Query: 237 LDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
               T+ +V            G  +H   +K+G L SN F++ ALL++Y  CG+   A+ 
Sbjct: 231 PSEYTIATVITACSALIGLHQGRWMHGSVIKQG-LMSNSFISAALLDMYVKCGELEDAQC 289

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
           VF+E+   + V W+ M+ GY  +G+  ++  LF      N+ PN V   ++LSA
Sbjct: 290 VFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSA 343



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 51/173 (29%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL- 239
           AL+ +Y KC  + +A C+F+ +S  D+V+W +MI G +QNG   +AL LF   ++   + 
Sbjct: 273 ALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVP 332

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           +++T+ +V            G ++H  A+K G +   V V  AL+++Y+ C     A R+
Sbjct: 333 NSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTV-VVNALVDMYAKCQAVSEANRI 391

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
           F  +  K+ V W++M++GY  +   N++  LF ++  +   P+ +     LSA
Sbjct: 392 FGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSA 444



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
 Frame = +3

Query: 57  RNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF- 233
           R  L+  YA    +  A  +F+     D   +  M+    Q     EA+ L + MR    
Sbjct: 67  RTKLLSCYAALGDLASARMVFDGTPRPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRP 126

Query: 234 ---SLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSG 404
              + D   +              +G  LH  A+K G   ++ FV  +L+++Y+  GD  
Sbjct: 127 CPEAQDDFVLSLALKACIRSADYGYGTRLHCDAVKVG--GADGFVMNSLVDMYAKAGDLE 184

Query: 405 YARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            AR+VF  +  +N V+W++M++G   +G A +   LF K+ ++N+ P+E    ++++ACS
Sbjct: 185 CARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMRQDNVPPSEYTIATVITACS 244

Query: 585 -----HTGR 596
                H GR
Sbjct: 245 ALIGLHQGR 253


>ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508818|gb|AES89960.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 871

 Score =  187 bits (474), Expect = 3e-45
 Identities = 96/186 (51%), Positives = 128/186 (68%), Gaps = 1/186 (0%)
 Frame = +3

Query: 51  TMRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY- 227
           ++RN+LV +YAKC +I +A  +F    DKDVV WNS+ISG +Q+G A+EAL LF  MR  
Sbjct: 377 SLRNSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRME 436

Query: 228 TFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
           +F  DA+T+V V            G +LH +ALK G +SS+++V TALLN Y+ CGD+  
Sbjct: 437 SFLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATS 496

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR VF+ MGEKN VTW+AM+ G GM GD   S  LF  +L+E L PNEVVFT++L+ACSH
Sbjct: 497 ARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSH 556

Query: 588 TGRIGE 605
           +G + E
Sbjct: 557 SGMVEE 562



 Score =  104 bits (260), Expect = 2e-20
 Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF-SL 239
           +LV  Y+KC  + +A  +F+ I D+ VV W SMI    QN  A E L+LF  MR  F   
Sbjct: 174 SLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDG 233

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           +  T+ S+            G  +H Y +K G +  N ++AT+LLN+Y  CGD G AR V
Sbjct: 234 NVFTVGSLVTACTKLGCLHQGKWVHGYVIKNG-IEINSYLATSLLNMYVKCGDIGDARSV 292

Query: 420 FNEM------GEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSAC 581
           F+E       G  + V W+AM+ GY   G    +  LF       + PN V   S+LSAC
Sbjct: 293 FDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSAC 352

Query: 582 SHTGRI 599
           +    I
Sbjct: 353 AQLENI 358



 Score = 95.9 bits (237), Expect = 8e-18
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 7/187 (3%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMIS------DKDVVVWNSMISGCSQNGYAHEALVLFR 215
           +  +L+++Y KC  IG+A  +F+  S        D+V W +MI G +Q GY   AL LF 
Sbjct: 272 LATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFT 331

Query: 216 TMR-YTFSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMC 392
             + Y    +++T+ S+            G  LH   +K G    +  +  +L+++Y+ C
Sbjct: 332 DKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGL--DDTSLRNSLVDMYAKC 389

Query: 393 GDSGYARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSIL 572
           G    A  VF    +K+ V+W+++++GY   G A E+ +LF ++  E+  P+ V    +L
Sbjct: 390 GLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVL 449

Query: 573 SACSHTG 593
           SAC+  G
Sbjct: 450 SACASVG 456



 Score = 59.3 bits (142), Expect = 9e-07
 Identities = 32/95 (33%), Positives = 53/95 (55%)
 Frame = +3

Query: 309 LHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVFNEMGEKNTVTWSAMMAGYGMHG 488
           LH   LK     S  FV T+L++ YS CG    AR+VF+E+ +++ V+W++M+  Y  + 
Sbjct: 157 LHCNILKSNAADS--FVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNE 214

Query: 489 DANESFNLFGKLLRENLEPNEVVFTSILSACSHTG 593
            A E   LF ++    L+ N     S+++AC+  G
Sbjct: 215 CAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLG 249


>dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 673

 Score =  186 bits (471), Expect = 6e-45
 Identities = 96/181 (53%), Positives = 125/181 (69%), Gaps = 1/181 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL 239
           NALV +YAKC+ + EA+ IF  IS+KDVV WNS+I+G  +N   +EAL+LF  MR   S 
Sbjct: 363 NALVDMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSS 422

Query: 240 -DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
            DAI++V+             G   H YA+K  FLS NV+V TALLNLY+ C D   A+R
Sbjct: 423 PDAISIVNALSACVCLGDLLIGKCFHTYAVKRAFLS-NVYVNTALLNLYNKCADLPSAQR 481

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGR 596
           VF+EM E+N+VTW AM+ GYGM GD+  S +L  K+L++N++PNEVVFTSILS CSHTG 
Sbjct: 482 VFSEMSERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGM 541

Query: 597 I 599
           +
Sbjct: 542 V 542



 Score =  108 bits (269), Expect = 2e-21
 Identities = 63/174 (36%), Positives = 93/174 (53%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL 239
           N LV +YAK   +  A  +F+ I  ++VV W SM+SGC QNG+A E L LF  MR    L
Sbjct: 161 NCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVL 220

Query: 240 DA-ITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
            +  TM SV            G  +H   +K G +  N F+  A+L++Y  CG+   ARR
Sbjct: 221 PSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVF-NPFITAAVLDMYVKCGEVEDARR 279

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
           +F+E+G  + V W+ M+ GY  +G   ++  LF      ++ PN V   ++LSA
Sbjct: 280 LFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSA 333



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 49/174 (28%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL- 239
           A++ +Y KC  + +A  +F+ +   D+V+W +MI G +QNG   +AL+LF   ++   + 
Sbjct: 263 AVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVP 322

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           +++T+ +V            G  +HA ++K   + ++V V  AL+++Y+ C     A  +
Sbjct: 323 NSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDV-VMNALVDMYAKCKALSEANGI 381

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSAC 581
           F  +  K+ VTW++++AGY  +   NE+  LF ++  +   P+ +   + LSAC
Sbjct: 382 FGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSAC 435



 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
 Frame = +3

Query: 57  RNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFS 236
           R  L+  YA    +  A  + +     D   +   +   +  G   +AL L R MR    
Sbjct: 58  RTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALGWHAAAGRHADALALHRGMRRRCP 117

Query: 237 L---DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGY 407
               D + +              +G  LH  A+K G   ++ FV   L+++Y+  GD   
Sbjct: 118 EAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAG--GADGFVMNCLVDMYAKAGDLEN 175

Query: 408 ARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSH 587
           AR+VF+ +  +N V+W++M++G   +G A E   LF ++  E + P+E    S+L AC+ 
Sbjct: 176 ARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTM 235

Query: 588 TGRI 599
            G +
Sbjct: 236 LGSL 239


>ref|XP_006656717.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like [Oryza brachyantha]
          Length = 612

 Score =  184 bits (466), Expect = 2e-44
 Identities = 93/183 (50%), Positives = 128/183 (69%), Gaps = 1/183 (0%)
 Frame = +3

Query: 54  MRNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT- 230
           +RNALV +YAKC+ + +A+ IF  I  KDVV WNSM++G S+NG A+E+LVLF  MR   
Sbjct: 300 VRNALVDMYAKCQALPDANSIFERILIKDVVAWNSMMAGYSENGMANESLVLFNQMRMQG 359

Query: 231 FSLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYA 410
            S DAI++V+             G + H Y +K  F+S +++V TALLNLY+ C D   A
Sbjct: 360 LSPDAISVVNAISACVCLADLHVGKSFHTYTVKYAFMS-DIYVNTALLNLYNKCADLLSA 418

Query: 411 RRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHT 590
           +R+FN+M ++N+VTWSAM+ GYGM GD   S  +F ++L++N+ PNEVVFTSILSACSHT
Sbjct: 419 QRIFNDMTDRNSVTWSAMIGGYGMQGDLAGSIGIFNEMLKDNVHPNEVVFTSILSACSHT 478

Query: 591 GRI 599
           G +
Sbjct: 479 GMV 481



 Score = 98.2 bits (243), Expect = 2e-18
 Identities = 60/174 (34%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY-TFS 236
           N LV +YAK   +  A  +F+ + D++VV W SM+SG  QNG+A E LVLF  MR  +  
Sbjct: 100 NCLVDMYAKAGDLETARKVFDRVPDRNVVSWTSMLSGSIQNGFAEEGLVLFNEMRKDSVD 159

Query: 237 LDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
               TM SV            G  +H   +K GF S+N FV+ +LL++Y+ C     ARR
Sbjct: 160 PSEYTMASVLSACAMLAGLHQGRWIHGSVIKHGF-SANSFVSASLLDMYAKCEKVEDARR 218

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
           VF+E+   + V W+AM+  Y  +    ++  LF      ++ P      +++SA
Sbjct: 219 VFDELESVDLVLWTAMIVRYTQNKCPLDALQLFLHKKFASIVPGSFTIPAVISA 272



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 1/174 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSLD 242
           +L+ +YAKC  + +A  +F+ +   D+V+W +MI   +QN    +AL LF   ++   + 
Sbjct: 202 SLLDMYAKCEKVEDARRVFDELESVDLVLWTAMIVRYTQNKCPLDALQLFLHKKFASIVP 261

Query: 243 -AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
            + T+ +V            G ++H   +K G + S   V  AL+++Y+ C     A  +
Sbjct: 262 GSFTIPAVISASAQLRNLSLGRSIHGIGVKLGTMES-AMVRNALVDMYAKCQALPDANSI 320

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSAC 581
           F  +  K+ V W++MMAGY  +G ANES  LF ++  + L P+ +   + +SAC
Sbjct: 321 FERILIKDVVAWNSMMAGYSENGMANESLVLFNQMRMQGLSPDAISVVNAISAC 374



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 35/105 (33%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
 Frame = +3

Query: 297 FGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVFNEMGEKNTVTWSAMMAGY 476
           +G  LH   +  G   S  FV   L+++Y+  GD   AR+VF+ + ++N V+W++M++G 
Sbjct: 80  YGRRLHCTVVTAGGADS--FVMNCLVDMYAKAGDLETARKVFDRVPDRNVVSWTSMLSGS 137

Query: 477 GMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS-----HTGR 596
             +G A E   LF ++ +++++P+E    S+LSAC+     H GR
Sbjct: 138 IQNGFAEEGLVLFNEMRKDSVDPSEYTMASVLSACAMLAGLHQGR 182


>ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Capsella rubella]
           gi|482561043|gb|EOA25234.1| hypothetical protein
           CARUB_v10018547mg [Capsella rubella]
          Length = 701

 Score =  183 bits (464), Expect = 4e-44
 Identities = 94/184 (51%), Positives = 125/184 (67%), Gaps = 2/184 (1%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY-TFS 236
           NALVH+YAKC    +A  +F M S+KD+V WNS+ISG SQNG  +EAL LFR M   + +
Sbjct: 386 NALVHMYAKCYQNRDARYVFEMESEKDIVAWNSIISGFSQNGSIYEALFLFRRMNSESVT 445

Query: 237 LDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFL-SSNVFVATALLNLYSMCGDSGYAR 413
            +A+T+ S+            G +LHAY++K GFL SS+V + TALL+ Y+ CGD+  AR
Sbjct: 446 PNAVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHIGTALLDFYAKCGDAESAR 505

Query: 414 RVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTG 593
            +FN + EKNT+TWSAM+ GYG  GD   S  LF ++L++  +PNE  FTSILSACSHTG
Sbjct: 506 LIFNTIEEKNTITWSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSILSACSHTG 565

Query: 594 RIGE 605
            + E
Sbjct: 566 MVNE 569



 Score =  105 bits (263), Expect = 8e-21
 Identities = 65/179 (36%), Positives = 95/179 (53%), Gaps = 1/179 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL-D 242
           L+ +YAKC  I  A  +F  I+ ++VV W SMI+G  +N    EALV+F  MR    L +
Sbjct: 187 LLDMYAKCGEIKSAYKVFEDITLRNVVCWTSMIAGYVKNDLHEEALVMFNRMRENTVLGN 246

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
             T  ++            G   H   +K G   S+  V T+LL++Y  CGD   ARRVF
Sbjct: 247 EYTYGTLVMACTKLSALHQGKWFHGCLIKSGIELSSCLV-TSLLDMYVKCGDISNARRVF 305

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           +E    + V W+AM+ GY  + +ANE+ +LF K+    ++PN V   S+LS C   G +
Sbjct: 306 DEPSHVDLVMWTAMIVGYTHNNNANEALSLFQKMKGVGMKPNCVTIASVLSGCGLIGNL 364



 Score =  103 bits (256), Expect = 5e-20
 Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 1/180 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT-FSL 239
           +L+ +Y KC  I  A  +F+  S  D+V+W +MI G + N  A+EAL LF+ M+      
Sbjct: 287 SLLDMYVKCGDISNARRVFDEPSHVDLVMWTAMIVGYTHNNNANEALSLFQKMKGVGMKP 346

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           + +T+ SV            G  +H  ++K G   +NV  A AL+++Y+ C  +  AR V
Sbjct: 347 NCVTIASVLSGCGLIGNLELGRAVHGLSIKVGLWDTNV--ANALVHMYAKCYQNRDARYV 404

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGRI 599
           F    EK+ V W+++++G+  +G   E+  LF ++  E++ PN V   S+ SAC+  G +
Sbjct: 405 FEMESEKDIVAWNSIISGFSQNGSIYEALFLFRRMNSESVTPNAVTVASLFSACASLGSL 464



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 41/174 (23%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
 Frame = +3

Query: 66  LVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTM-RYTFSLD 242
           +V +Y       +A  +F+ I + D   W  M+     N  + E +  + +M  + F  D
Sbjct: 87  IVSMYGSFGYTKDARLMFDQIPEPDFYSWKVMLRCYCLNNESLEIINFYDSMIEHGFRYD 146

Query: 243 AITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRVF 422
            I                 G  +H   +K    S +  V T LL++Y+ CG+   A +VF
Sbjct: 147 DIVFSKALKACTELQDLESGKKIHCQIVKVP--SFDNVVLTGLLDMYAKCGEIKSAYKVF 204

Query: 423 NEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            ++  +N V W++M+AGY  +    E+  +F ++    +  NE  + +++ AC+
Sbjct: 205 EDITLRNVVCWTSMIAGYVKNDLHEEALVMFNRMRENTVLGNEYTYGTLVMACT 258


>gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
          Length = 716

 Score =  182 bits (461), Expect = 9e-44
 Identities = 91/181 (50%), Positives = 126/181 (69%), Gaps = 1/181 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTFSL 239
           NALV +YAKC+ + EA  IF  IS+KDVV WNSMISG ++N    +AL+LF+ M    S 
Sbjct: 406 NALVDMYAKCQAVSEADRIFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSS 465

Query: 240 -DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
            DAI++V+             G ++H YA+K  F+S N++V TALLNLY+ CGD   ARR
Sbjct: 466 PDAISVVNALSASVCLGDLLIGKSIHGYAVKHAFVS-NIYVDTALLNLYNKCGDLLSARR 524

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACSHTGR 596
           VF+EM ++N+VTW AM+ GYGM GD+  S +LFG++L++ + PN++ FTSILS CSH+G 
Sbjct: 525 VFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFGEMLKDGVYPNDIAFTSILSTCSHSGM 584

Query: 597 I 599
           +
Sbjct: 585 V 585



 Score =  112 bits (279), Expect = 1e-22
 Identities = 64/174 (36%), Positives = 96/174 (55%), Gaps = 1/174 (0%)
 Frame = +3

Query: 60  NALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRY-TFS 236
           N+LV +YAK   +  A  +F  I D++VV W SMISGC QNG+A + L+LF  MR     
Sbjct: 204 NSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVP 263

Query: 237 LDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARR 416
               T+ +V            G  +H   +K+G L SN F++ ALL++Y  CG+  +AR 
Sbjct: 264 PSEYTIATVITACSALFGLHQGRWMHGSVIKQG-LMSNSFISAALLDMYVKCGELDHARC 322

Query: 417 VFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
           VF+E+   + V W+ M+ GY  +G+  ++  LF      N+ PN V   ++LSA
Sbjct: 323 VFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSA 376



 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 52/173 (30%), Positives = 94/173 (54%), Gaps = 1/173 (0%)
 Frame = +3

Query: 63  ALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYT-FSL 239
           AL+ +Y KC  +  A C+F+ +S  D+V+W +MI G +QNG   +AL LF   R+   + 
Sbjct: 306 ALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAP 365

Query: 240 DAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSGYARRV 419
           +++T  +V            G ++H  A+K G +  NV V  AL+++Y+ C     A R+
Sbjct: 366 NSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNV-VGNALVDMYAKCQAVSEADRI 424

Query: 420 FNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSA 578
           F  +  K+ V W++M++GY  +   +++  LF ++  +   P+ +   + LSA
Sbjct: 425 FGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSA 477



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 9/189 (4%)
 Frame = +3

Query: 57  RNALVHLYAKCRMIGEASCIFNMISDKDVVVWNSMISGCSQNGYAHEALVLFRTMRYTF- 233
           R  L+  YA    +  A  +F+     D   + +M+    Q     +A+ L   MR    
Sbjct: 100 RTKLLSCYAALGDLASARMVFDGTPRPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRP 159

Query: 234 ---SLDAITMVSVXXXXXXXXXXXFGCTLHAYALKEGFLSSNVFVATALLNLYSMCGDSG 404
              + D   +              +G +LH  A+K G   ++ FV  +L+++Y+   D  
Sbjct: 160 CPEAQDDFVLSLALKACIRSAEYSYGRSLHCDAIKVG--GADGFVMNSLVDMYAKAEDLE 217

Query: 405 YARRVFNEMGEKNTVTWSAMMAGYGMHGDANESFNLFGKLLRENLEPNEVVFTSILSACS 584
            AR+VF  + ++N V+W++M++G   +G A++   LF K+ ++N+ P+E    ++++ACS
Sbjct: 218 CARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMRQDNVPPSEYTIATVITACS 277

Query: 585 -----HTGR 596
                H GR
Sbjct: 278 ALFGLHQGR 286