BLASTX nr result
ID: Sinomenium22_contig00035705
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00035705
(541 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi... 172 6e-41
emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera] 169 3e-40
ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containi... 168 7e-40
ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein... 164 1e-38
ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containi... 163 2e-38
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,... 163 2e-38
ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutr... 162 5e-38
ref|XP_006431200.1| hypothetical protein CICLE_v10011436mg [Citr... 162 6e-38
ref|XP_006482626.1| PREDICTED: pentatricopeptide repeat-containi... 161 1e-37
ref|NP_193619.1| pentatricopeptide repeat-containing protein [Ar... 160 1e-37
ref|XP_006469734.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37
ref|XP_006447459.1| hypothetical protein CICLE_v10014715mg [Citr... 160 2e-37
emb|CBI22243.3| unnamed protein product [Vitis vinifera] 160 2e-37
ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containi... 160 2e-37
ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Caps... 159 3e-37
ref|XP_002867972.1| pentatricopeptide repeat-containing protein ... 159 3e-37
ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containi... 159 5e-37
ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutr... 158 9e-37
ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containi... 158 9e-37
gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis] 157 1e-36
>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 172 bits (435), Expect = 6e-41
Identities = 83/171 (48%), Positives = 112/171 (65%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IR YANSP + +L +F QML ++ P+ +TF F +K+C EEG+Q+H +LK+G
Sbjct: 80 IRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQIHGHVLKTGL 139
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
DLF N LIH+YA+CG ++ R L D ERD+VSWN++LS Y GL+E A LFDE
Sbjct: 140 GDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGLMELACHLFDE 199
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCG 513
M ER + S N MI+GY G +++AR +F E P +NV SWN MI GY+ G
Sbjct: 200 MTERNVESWNFMISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAG 250
Score = 100 bits (248), Expect = 3e-19
Identities = 59/190 (31%), Positives = 101/190 (53%), Gaps = 11/190 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GY+++ L LF M + P+ T V+ ACAH+ A +G+ VH +I K+G
Sbjct: 243 ITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVGALSQGEWVHAYIDKNGI 302
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D F L+ MY+ CG ++ ++F++ +D+ +WNSI+SG G ++A ++F E
Sbjct: 303 SIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSE 362
Query: 361 MPERGIVSRNV----MINGYSKWGEIDKARELFNEM-------PTRNVESWNIMIAGYAK 507
M G V +++ S+ G +D+ RE+FN M PT +E + M+ +
Sbjct: 363 MLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMVHVHGIQPT--IEHYGCMVDLLGR 420
Query: 508 CGLLESSQKV 537
GLLE ++++
Sbjct: 421 VGLLEEAEEL 430
>emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 169 bits (429), Expect = 3e-40
Identities = 84/181 (46%), Positives = 118/181 (65%), Gaps = 1/181 (0%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
++ Y S + +L + +M K + +T+PFV+KAC + EG V +K G
Sbjct: 82 VKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGF 141
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+F VNGLI MY CG+ R +FD E+DLVSWNS+L GYV CG +ENAQ +FDE
Sbjct: 142 GGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDE 201
Query: 361 MPERGIVSRNVMINGY-SKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKV 537
MPER +VS ++MI+GY K GE+++AR F+ MPTR++ SWN MI GYAK G +E ++++
Sbjct: 202 MPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREI 261
Query: 538 F 540
F
Sbjct: 262 F 262
Score = 73.9 bits (180), Expect = 2e-11
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GYA S+ +L+LF QML P+ + + AC+ L A ++G+ +H ++ ++
Sbjct: 277 IDGYAXHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRM 336
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+ L+ MY CG D R +F++ ER++VSWN ++ G G + A F +
Sbjct: 337 LLDIVVQTALVDMYLKCGSXDEARXIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFXQ 396
Query: 361 MPERGIVSRNVMINGY----SKWGEIDKARELFNEMP-----TRNVESWNIMIAGYAKCG 513
M I +++ G S + + +FN+M +E + ++ + G
Sbjct: 397 MEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAG 456
Query: 514 LLESSQKV 537
L+ Q +
Sbjct: 457 QLDQIQNI 464
>ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product
[Vitis vinifera]
Length = 585
Score = 168 bits (426), Expect = 7e-40
Identities = 83/181 (45%), Positives = 118/181 (65%), Gaps = 1/181 (0%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
++ Y S + +L + +M + + +T+PFV+KAC + EG V +K G
Sbjct: 82 VKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQGEAVKRGF 141
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+F VNGLI MY CG+ R +FD E+DLVSWNS+L GYV CG +ENAQ +FDE
Sbjct: 142 GGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEMENAQNMFDE 201
Query: 361 MPERGIVSRNVMINGY-SKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKV 537
MPER +VS ++MI+GY K GE+++AR F+ MPTR++ SWN MI GYAK G +E ++++
Sbjct: 202 MPERDVVSWSIMIDGYGKKMGEVNRARVFFDSMPTRDLVSWNSMIDGYAKVGEMEVAREI 261
Query: 538 F 540
F
Sbjct: 262 F 262
Score = 74.7 bits (182), Expect = 1e-11
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 9/188 (4%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GYA S+ +L+LF QML P+ + + AC+ L A ++G+ +H ++ ++
Sbjct: 277 IDGYAQHRDSKEALNLFRQMLCQGIKPDRVSVVGAVSACSQLGALDQGRWIHLYMKRNRM 336
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+ L+ MY CG D R++F++ ER++VSWN ++ G G + A F +
Sbjct: 337 LLDIVVQTALVDMYLKCGSRDEARRIFNSMPERNVVSWNVMIVGLGMNGFGKEALECFTQ 396
Query: 361 MPERGIVSRNVMINGY----SKWGEIDKARELFNEMP-----TRNVESWNIMIAGYAKCG 513
M I +++ G S + + +FN+M +E + ++ + G
Sbjct: 397 MEMERIPMDDLLFLGVLMACSHANLVTEGLHIFNQMKGVYRLEPKLEHYGCLVDLLGRAG 456
Query: 514 LLESSQKV 537
L+ Q +
Sbjct: 457 QLDQIQNI 464
>ref|XP_007049307.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
cacao] gi|508701568|gb|EOX93464.1| Pentatricopeptide
repeat superfamily protein, putative [Theobroma cacao]
Length = 682
Score = 164 bits (415), Expect = 1e-38
Identities = 81/180 (45%), Positives = 117/180 (65%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I+ Y + S ++ LF Q+L + P+ FTFP VIK CA L A EG+Q+H +LK G
Sbjct: 88 IKCYVENQQSHEAIFLFAQLLH-HFPPDEFTFPCVIKGCAKLNAVNEGKQIHGLVLKLGF 146
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D F+ L+++Y+ CG++ + K+FD E+DLV WNS+L GY CG ++ A + F+E
Sbjct: 147 GLDKFTQGSLVNLYSKCGEIASAHKVFDVMGEKDLVLWNSLLDGYARCGEVKVAMKAFEE 206
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MPER S V+I+G +K GE++ ARE+F +MP RN+ SWN MI GY K G + S+ K+F
Sbjct: 207 MPERDCFSWTVLIDGLAKCGEVETAREIFEKMPNRNLVSWNTMINGYMKAGDINSACKLF 266
Score = 73.2 bits (178), Expect = 4e-11
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Frame = +1
Query: 37 SLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGADTDLFSVNGLIH 216
+L +F +MLK P+ T VI A + L + +G+ +H +I+K+G + D LI
Sbjct: 293 ALEMFKRMLKEEFRPSHATLVSVISAVSGLASLGKGRSMHSYIVKNGIELDGVVGTVLIE 352
Query: 217 MYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMPERGIVSRNV- 393
MY+ CG +D+ +F + L W +I+ G G+ E+A F EM G+ +
Sbjct: 353 MYSKCGSIDSALTIFRTISNKKLGHWTAIIVGLSIHGMAEHALEFFLEMCRIGVKPNAIT 412
Query: 394 ---MINGYSKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAKCGLLESSQKV 537
++N S G I+ R FN M +E + ++ + G LE ++ +
Sbjct: 413 FVGVLNACSHAGLINDGRGYFNTMINEYGIKPTIEHYGCLVDMLCRAGDLEEAKNI 468
Score = 68.6 bits (166), Expect = 1e-09
Identities = 33/92 (35%), Positives = 56/92 (60%)
Frame = +1
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ D FS LI A CG+V+ R++F+ R+LVSWN++++GY+ G + +A +LF+
Sbjct: 209 ERDCFSWTVLIDGLAKCGEVETAREIFEKMPNRNLVSWNTMINGYMKAGDINSACKLFNR 268
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEM 456
MP+R +++ N +I G +A E+F M
Sbjct: 269 MPKRNLITWNSIIGGLELNLHFVEALEMFKRM 300
>ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 163 bits (413), Expect = 2e-38
Identities = 77/180 (42%), Positives = 118/180 (65%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I+ Y + FS + LF +++ P+ FT P VIK CA L +EG+Q+H LK G
Sbjct: 85 IKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGF 143
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+D+F L++MY+ CG++D RK+FD ++D+V WNS++ GY CG ++ A +LF+E
Sbjct: 144 GSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEE 203
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MPER S V+++G SK G+++ AR+LF++MP RN+ SWN MI GY K G +S+ ++F
Sbjct: 204 MPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELF 263
Score = 65.5 bits (158), Expect = 8e-09
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GY + ++ +F MLK + P+ T V+ A + L +G+ +H ++ K+G
Sbjct: 278 IAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGF 337
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ D LI MYA CG +++ +F ++ + W +I+ G G+ +A LF E
Sbjct: 338 ELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLE 397
Query: 361 MPERGIVSRNV----MINGYSKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAKCG 513
M + G+ + ++N + G +D R+ F+ M +E + ++ + G
Sbjct: 398 MCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAG 457
Query: 514 LLESSQ 531
LE ++
Sbjct: 458 HLEEAK 463
>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 434
Score = 163 bits (413), Expect = 2e-38
Identities = 80/180 (44%), Positives = 121/180 (67%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I+ Y + S ++ LF Q+L +P+ FT P VIK CA L A +EG+Q+H +LK G
Sbjct: 80 IKCYIQNQLSHDAITLFSQLLHE-FNPDGFTLPCVIKGCARLHATKEGKQIHGLVLKLGF 138
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ F + L++MY+ C +D+ +K+F + ++DLVSWNS++ GYV CG +E +LF+E
Sbjct: 139 GLNKFVSSSLVNMYSKCKDIDSAKKVFLSMDDKDLVSWNSLIDGYVKCGQVELGMKLFEE 198
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MPER + S V+I+G+SK G++D ARELF++MP+RN+ SWN MI GY K G + ++F
Sbjct: 199 MPERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGDFVLASELF 258
Score = 81.3 bits (199), Expect = 1e-13
Identities = 41/96 (42%), Positives = 59/96 (61%)
Frame = +1
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ DLFS LI ++ CGKVD R+LFD R+LVSWN++++GY+ G A LFD+
Sbjct: 201 ERDLFSWTVLIDGFSKCGKVDVARELFDKMPSRNLVSWNAMINGYMKAGDFVLASELFDK 260
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRN 468
MPE+ ++S N M+ GY +A +LF M R+
Sbjct: 261 MPEKNLISWNSMVAGYDLNERFKEALDLFLTMLERD 296
Score = 72.0 bits (175), Expect = 9e-11
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
+ GY + + +L LF+ ML+ + +PN T A + L + G+ +H +++K+G
Sbjct: 273 VAGYDLNERFKEALDLFLTMLERDFTPNHATLVSTFSAVSGLASLSTGKWMHSYMVKNGF 332
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D LI+MY+ CG +++ +F ++ L W +I+ G G+ +NA F E
Sbjct: 333 QLDGVLATSLINMYSKCGNIESALSVFQLITKKKLGHWTAIIVGLGMHGMADNALEFFHE 392
Query: 361 MPERGIVSRNV----MINGYSKWGEIDKARELFNEMPTR 465
M G+ + ++N S G ++ R+ F+ M R
Sbjct: 393 MCRTGMRPHAITFIGVLNACSHAGLVEDGRKYFDMMAIR 431
>ref|XP_006414048.1| hypothetical protein EUTSA_v10024877mg [Eutrema salsugineum]
gi|557115218|gb|ESQ55501.1| hypothetical protein
EUTSA_v10024877mg [Eutrema salsugineum]
Length = 535
Score = 162 bits (410), Expect = 5e-38
Identities = 81/180 (45%), Positives = 115/180 (63%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IR YANS + +L F +ML P+ ++F FV+KACA FEEG+Q+H LKS
Sbjct: 82 IRAYANSSAPESALTAFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFLKSDL 141
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+D+F N L+++Y G + RK+ D ERD+VSWNS+LS YV GL+E A+ +FDE
Sbjct: 142 ISDVFVENTLVNVYGRSGYFEIARKVLDTMPERDVVSWNSLLSAYVEKGLVEEARGVFDE 201
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
M ER + S N MI+GY+ G +++A+ELF+ MP ++V SWN M++ YA G +VF
Sbjct: 202 MDERNVESWNFMISGYAAAGLVNEAKELFDSMPVKDVVSWNAMVSAYAHVGCYSEVLEVF 261
Score = 92.0 bits (227), Expect = 8e-17
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTS-PNLFTFPFVIKACAHLVAFEEGQQVHCFILKSG 177
+ YA+ L +F +ML S+T P+ FT V+ ACA+L + +G+ VH + K G
Sbjct: 245 VSAYAHVGCYSEVLEVFNEMLNSSTEKPDGFTLVNVLSACANLGSLSQGEWVHVYTDKHG 304
Query: 178 ADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFD 357
+ D F L+ MY+ CGKVD ++F + ++D+ +WNS++SG GL +A +F
Sbjct: 305 IEIDGFLATALVDMYSKCGKVDKALEVFRATSKKDVSTWNSMISGLSVHGLGNDALEIFS 364
Query: 358 EMPERGIVSRNV----MINGYSKWGEIDKARELFNEMPT-----RNVESWNIMIAGYAKC 510
EM G ++ ++ + G +D+AR LF M + +E + M+ +
Sbjct: 365 EMVHEGFKPNSITFIATLSACNHVGMLDQARRLFETMNSVYGVEPTIEHYGCMVDLLGRM 424
Query: 511 GLLESSQKV 537
G E ++++
Sbjct: 425 GKFEEAEEL 433
>ref|XP_006431200.1| hypothetical protein CICLE_v10011436mg [Citrus clementina]
gi|557533257|gb|ESR44440.1| hypothetical protein
CICLE_v10011436mg [Citrus clementina]
Length = 540
Score = 162 bits (409), Expect = 6e-38
Identities = 83/180 (46%), Positives = 115/180 (63%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IRG A S ++ L+ QM K + PN FTF FV+KAC L+ G VH I+K G
Sbjct: 80 IRGSAQSQNPLDAVFLYTQMEKCSIKPNKFTFSFVLKACTRLLYRNMGFCVHGKIVKYGF 139
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ + F N LI+ +A CG ++ LFD + D+V+W+S+ +GY G L A+ LFDE
Sbjct: 140 EFNRFVRNSLIYFHANCGDLNTASVLFDGDAKMDVVAWSSLTAGYARRGELSMARSLFDE 199
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MP R +VS NVMI GY+K GE++KA ELFNE+P R+V SWN MI+GY CG+ + + ++F
Sbjct: 200 MPVRDLVSWNVMITGYAKQGEMEKANELFNEVPKRDVVSWNAMISGYVLCGMNKQALEMF 259
Score = 73.2 bits (178), Expect = 4e-11
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 40/158 (25%)
Frame = +1
Query: 187 DLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMP 366
DL S N +I YA G+++ +LF+ +RD+VSWN+++SGYV CG+ + A +F+EM
Sbjct: 204 DLVSWNVMITGYAKQGEMEKANELFNEVPKRDVVSWNAMISGYVLCGMNKQALEMFEEMR 263
Query: 367 ERG----------------------------------------IVSRNVMINGYSKWGEI 426
G ++ N +I+ Y+K G I
Sbjct: 264 SVGERPDDVTMLSLLTACADLGDLEVGKKVHCTLLDMTSGVTKVLHGNALIDMYAKCGSI 323
Query: 427 DKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
++A E+F M R+V +W+ +I G A G E S +F
Sbjct: 324 ERAIEVFIGMRDRDVSTWSTLIGGLAFHGFAEESIAMF 361
Score = 72.8 bits (177), Expect = 5e-11
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 10/186 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILK-SG 177
I GY ++ +L +F +M P+ T ++ ACA L E G++VHC +L +
Sbjct: 243 ISGYVLCGMNKQALEMFEEMRSVGERPDDVTMLSLLTACADLGDLEVGKKVHCTLLDMTS 302
Query: 178 ADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFD 357
T + N LI MYA CG ++ ++F +RD+ +W++++ G G E + +F
Sbjct: 303 GVTKVLHGNALIDMYAKCGSIERAIEVFIGMRDRDVSTWSTLIGGLAFHGFAEESIAMFR 362
Query: 358 EMPERGIVSRNVMINGY----SKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAKC 510
EM + + G S G++++ ++ F M N+ + M+ +
Sbjct: 363 EMQRLKVRPTEITFVGVLVACSHAGKVEEGKKYFKLMKDEYNIEPNIRHYGCMVDLLGRA 422
Query: 511 GLLESS 528
GLL+ +
Sbjct: 423 GLLDEA 428
>ref|XP_006482626.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Citrus sinensis]
Length = 540
Score = 161 bits (407), Expect = 1e-37
Identities = 82/180 (45%), Positives = 115/180 (63%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IRG A S ++ L+ QM K + PN FTF FV+KAC L+ G VH ++K G
Sbjct: 80 IRGSAQSQNPLDAVFLYTQMEKCSIKPNKFTFSFVLKACTRLLYRNMGFCVHGKVVKYGF 139
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ + F N LI+ +A CG ++ LFD + D+V+W+S+ +GY G L A+ LFDE
Sbjct: 140 EFNRFVRNSLIYFHANCGDLNTASVLFDGDAKMDVVAWSSLTAGYARRGELSIARSLFDE 199
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MP R +VS NVMI GY+K GE++KA ELFNE+P R+V SWN MI+GY CG+ + + ++F
Sbjct: 200 MPVRDLVSWNVMITGYAKQGEMEKANELFNEVPKRDVVSWNAMISGYVLCGMNKQALEMF 259
Score = 73.2 bits (178), Expect = 4e-11
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 40/158 (25%)
Frame = +1
Query: 187 DLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMP 366
DL S N +I YA G+++ +LF+ +RD+VSWN+++SGYV CG+ + A +F+EM
Sbjct: 204 DLVSWNVMITGYAKQGEMEKANELFNEVPKRDVVSWNAMISGYVLCGMNKQALEMFEEMR 263
Query: 367 ERG----------------------------------------IVSRNVMINGYSKWGEI 426
G ++ N +I+ Y+K G I
Sbjct: 264 SVGERPDDVTMLSLLTACADLGDLEVGKKVHCTLLDMTSGVAKVLHGNALIDMYAKCGSI 323
Query: 427 DKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
++A E+F M R+V +W+ +I G A G E S +F
Sbjct: 324 ERAIEVFLGMRDRDVSTWSTLIGGLAFHGFAEESIAMF 361
Score = 70.9 bits (172), Expect = 2e-10
Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 11/189 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILK--S 174
I GY ++ +L +F +M P+ T ++ ACA L E G++VHC +L S
Sbjct: 243 ISGYVLCGMNKQALEMFEEMRSVGERPDDVTMLSLLTACADLGDLEVGKKVHCTLLDMTS 302
Query: 175 GADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLF 354
G L N LI MYA CG ++ ++F +RD+ +W++++ G G E + +F
Sbjct: 303 GVAKVLHG-NALIDMYAKCGSIERAIEVFLGMRDRDVSTWSTLIGGLAFHGFAEESIAMF 361
Query: 355 DEMPERGIVSRNVMINGY----SKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAK 507
EM + + G S G++++ ++ F M N+ + M+ +
Sbjct: 362 REMQRLKVRPTEITFVGVLVACSHAGKVEEGKKYFKLMRDEYNIEPNIRHYGCMVDLLGR 421
Query: 508 CGLLESSQK 534
GLL+ + K
Sbjct: 422 AGLLDEAFK 430
>ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g18840 gi|5738365|emb|CAA16741.2| putative protein
[Arabidopsis thaliana] gi|7268678|emb|CAB78886.1|
putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 160 bits (406), Expect = 1e-37
Identities = 80/180 (44%), Positives = 113/180 (62%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IR YANS + +L +F +ML P+ ++F FV+KACA FEEG+Q+H +KSG
Sbjct: 112 IRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGL 171
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
TD+F N L+++Y G + RK+ D RD VSWNS+LS Y+ GL++ A+ LFDE
Sbjct: 172 VTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDE 231
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
M ER + S N MI+GY+ G + +A+E+F+ MP R+V SWN M+ YA G +VF
Sbjct: 232 MEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Score = 90.1 bits (222), Expect = 3e-16
Identities = 55/189 (29%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTS-PNLFTFPFVIKACAHLVAFEEGQQVHCFILKSG 177
+ YA+ L +F +ML +T P+ FT V+ ACA L + +G+ VH +I K G
Sbjct: 275 VTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHG 334
Query: 178 ADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFD 357
+ + F L+ MY+ CGK+D ++F + +RD+ +WNSI+S GL ++A +F
Sbjct: 335 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFS 394
Query: 358 EMPERGIVSRNV----MINGYSKWGEIDKARELFNEMPT-----RNVESWNIMIAGYAKC 510
EM G + +++ + G +D+AR+LF M + +E + M+ +
Sbjct: 395 EMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRM 454
Query: 511 GLLESSQKV 537
G +E ++++
Sbjct: 455 GKIEEAEEL 463
>ref|XP_006469734.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Citrus sinensis]
Length = 586
Score = 160 bits (405), Expect = 2e-37
Identities = 79/181 (43%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IRGY S Q +L ++ M + + +T+PFV+KAC L+ EG ++H ++K G
Sbjct: 84 IRGYTQSSNPQKALSFYVNMKRKGLLVDNYTYPFVLKACGVLMGLVEGTEIHGEVVKMGF 143
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+F VNGLI MY+ CG + R +F+ S +DLVSWN +L G+V CG + A+ +FDE
Sbjct: 144 LCDVFVVNGLIGMYSKCGHMGCARSVFEGSEIKDLVSWNLVLRGFVECGEMGKAREVFDE 203
Query: 361 MPERGIVSRNVMINGY-SKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKV 537
MP++ +S ++MI+GY K G+I AR LF MP +++ SWN MI GYAK G L ++Q++
Sbjct: 204 MPQKDAISWSIMIDGYRKKKGDISSARILFEHMPIKDLISWNSMIDGYAKIGDLVAAQQL 263
Query: 538 F 540
F
Sbjct: 264 F 264
Score = 75.5 bits (184), Expect = 8e-12
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GYA + +L+LF +ML P++ + I ACA + A + G+ +H F+ +S
Sbjct: 279 IDGYAQHGNPKEALYLFREMLCQGVRPDVISVMGAISACAQVGALDLGKWIHVFMKRSRI 338
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+ LI MY CG +D R++F + +++++S+N +++G G E A + F +
Sbjct: 339 TMDMIVQTALIDMYMKCGSLDEARRIFYSMTKKNVISYNVMIAGLGMNGFGEEALKCFAQ 398
Query: 361 MPERGIVSRNVMINGY----SKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAKCG 513
M GI +++ G S G + +F M +E ++ ++ ++ G
Sbjct: 399 METEGIPKDDLIFLGVLIACSHSGLATEGYRIFQSMKRHCGIEPKLEHYSCLVDLLSRAG 458
Query: 514 LLESSQKV 537
LE + +
Sbjct: 459 ELEQALNI 466
>ref|XP_006447459.1| hypothetical protein CICLE_v10014715mg [Citrus clementina]
gi|557550070|gb|ESR60699.1| hypothetical protein
CICLE_v10014715mg [Citrus clementina]
Length = 586
Score = 160 bits (405), Expect = 2e-37
Identities = 79/181 (43%), Positives = 117/181 (64%), Gaps = 1/181 (0%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IRGY S Q +L ++ M + + +T+PFV+KAC L+ EG ++H ++K G
Sbjct: 84 IRGYTQSSNPQKALSFYVNMKRKGLLVDNYTYPFVLKACGVLMGLVEGTEIHGEVVKMGF 143
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+F VNGLI MY+ CG + R +F+ S +DLVSWN +L G+V CG + A+ +FDE
Sbjct: 144 LCDVFVVNGLIGMYSKCGHMGCARSVFEGSEIKDLVSWNLVLRGFVECGEMGKAREVFDE 203
Query: 361 MPERGIVSRNVMINGY-SKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKV 537
MP++ +S ++MI+GY K G+I AR LF MP +++ SWN MI GYAK G L ++Q++
Sbjct: 204 MPQKDAISWSIMIDGYRKKKGDISSARILFEHMPIKDLISWNSMIDGYAKIGDLVAAQQL 263
Query: 538 F 540
F
Sbjct: 264 F 264
Score = 75.5 bits (184), Expect = 8e-12
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 9/188 (4%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GYA + +L+LF +ML P++ + I ACA + A + G+ +H F+ +S
Sbjct: 279 IDGYAQHGNPKEALYLFREMLCQGVRPDVISVMGAISACAQVGALDLGKWIHVFMKRSRI 338
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D+ LI MY CG +D R++F + +++++S+N +++G G E A + F +
Sbjct: 339 TMDMIVQTALIDMYMKCGSLDEARRIFYSMTKKNVISYNVMIAGLGMNGFGEEALKCFAQ 398
Query: 361 MPERGIVSRNVMINGY----SKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAKCG 513
M GI +++ G S G + +F M +E ++ ++ ++ G
Sbjct: 399 METEGIPKDDLIFLGVLIACSHSGLATEGYRIFQSMKRHCGIEPKLEHYSCLVDLLSRAG 458
Query: 514 LLESSQKV 537
LE + +
Sbjct: 459 ELEQALNI 466
>emb|CBI22243.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 160 bits (404), Expect = 2e-37
Identities = 80/180 (44%), Positives = 117/180 (65%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IRG A SP ++ L+ QM P+ FTFPFV+KAC L + G VH + + G
Sbjct: 50 IRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGF 109
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+++ F N LI+ +A CG + R LFD S +RD+V+W+++ +GY G L A++LFDE
Sbjct: 110 ESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDE 169
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MP + +VS NVMI GY+K GE++ AR+LF+E+P R+V +WN MIAGY CG + + ++F
Sbjct: 170 MPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMF 229
Score = 79.0 bits (193), Expect = 7e-13
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSG- 177
I GY +Q +L +F +M P+ T ++ AC L + GQ++HC I + G
Sbjct: 213 IAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGF 272
Query: 178 ADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFD 357
D + N LI MYA CG + ++F E+D+ +WNS+L G G E + LF
Sbjct: 273 RDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFT 332
Query: 358 EMPERGIVSRNVMINGY----SKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAKC 510
EM + I + G S G +++ R+ F+ M N+ + M+ +
Sbjct: 333 EMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRA 392
Query: 511 GLLESS 528
GLL +
Sbjct: 393 GLLNEA 398
Score = 73.2 bits (178), Expect = 4e-11
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 40/158 (25%)
Frame = +1
Query: 187 DLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMP 366
DL S N +I YA G++++ RKLFD +RD+V+WN++++GYV CG + A +F+EM
Sbjct: 174 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 233
Query: 367 ERG----------------------------------------IVSRNVMINGYSKWGEI 426
G ++ N +I+ Y+K G I
Sbjct: 234 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSI 293
Query: 427 DKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
+A E+F M ++V +WN ++ G A G E S +F
Sbjct: 294 VRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLF 331
>ref|XP_002283796.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Vitis vinifera]
Length = 550
Score = 160 bits (404), Expect = 2e-37
Identities = 80/180 (44%), Positives = 117/180 (65%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IRG A SP ++ L+ QM P+ FTFPFV+KAC L + G VH + + G
Sbjct: 85 IRGSAQSPSPLNAISLYSQMENGCVRPDKFTFPFVLKACTRLCWVKMGFGVHGRVFRLGF 144
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+++ F N LI+ +A CG + R LFD S +RD+V+W+++ +GY G L A++LFDE
Sbjct: 145 ESNTFVRNTLIYFHANCGDLAVARALFDGSAKRDVVAWSALTAGYARRGELGVARQLFDE 204
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MP + +VS NVMI GY+K GE++ AR+LF+E+P R+V +WN MIAGY CG + + ++F
Sbjct: 205 MPVKDLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMF 264
Score = 79.0 bits (193), Expect = 7e-13
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 10/186 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSG- 177
I GY +Q +L +F +M P+ T ++ AC L + GQ++HC I + G
Sbjct: 248 IAGYVLCGSNQQALEMFEEMRSVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGF 307
Query: 178 ADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFD 357
D + N LI MYA CG + ++F E+D+ +WNS+L G G E + LF
Sbjct: 308 RDLSVLLGNALIDMYAKCGSIVRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLFT 367
Query: 358 EMPERGIVSRNVMINGY----SKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAKC 510
EM + I + G S G +++ R+ F+ M N+ + M+ +
Sbjct: 368 EMRKLKIRPDEITFVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRA 427
Query: 511 GLLESS 528
GLL +
Sbjct: 428 GLLNEA 433
Score = 73.2 bits (178), Expect = 4e-11
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 40/158 (25%)
Frame = +1
Query: 187 DLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMP 366
DL S N +I YA G++++ RKLFD +RD+V+WN++++GYV CG + A +F+EM
Sbjct: 209 DLVSWNVMITGYAKRGEMESARKLFDEVPKRDVVTWNAMIAGYVLCGSNQQALEMFEEMR 268
Query: 367 ERG----------------------------------------IVSRNVMINGYSKWGEI 426
G ++ N +I+ Y+K G I
Sbjct: 269 SVGELPDEVTMLSLLSACTDLGDLDAGQRIHCCISEMGFRDLSVLLGNALIDMYAKCGSI 328
Query: 427 DKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
+A E+F M ++V +WN ++ G A G E S +F
Sbjct: 329 VRALEVFQGMREKDVSTWNSVLGGLAFHGHAEKSIHLF 366
>ref|XP_006283500.1| hypothetical protein CARUB_v10004552mg [Capsella rubella]
gi|482552205|gb|EOA16398.1| hypothetical protein
CARUB_v10004552mg [Capsella rubella]
Length = 537
Score = 159 bits (403), Expect = 3e-37
Identities = 80/180 (44%), Positives = 112/180 (62%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IR YANS + +L +F ML P+ ++F FV+KACA FEEG+Q+H +KSG
Sbjct: 84 IRAYANSSTPEMALVVFRDMLLGPVFPDKYSFTFVLKACAAFSGFEEGRQIHGLFMKSGL 143
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
TD+F N L+++Y G + RK+ D RD VSWNS+LS Y+ GL+E A+ LFDE
Sbjct: 144 MTDVFVENTLVNVYGRSGYFEIARKVLDKMPVRDAVSWNSLLSAYLEKGLVEEARALFDE 203
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
M ER + S N MI+GY+ G + +A+E+F+ MP ++V SWN M+ YA G +VF
Sbjct: 204 MEERNVESWNFMISGYAAAGLVKEAKEIFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVF 263
Score = 92.0 bits (227), Expect = 8e-17
Identities = 57/189 (30%), Positives = 99/189 (52%), Gaps = 10/189 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTS-PNLFTFPFVIKACAHLVAFEEGQQVHCFILKSG 177
+ YA+ L +F +ML +T P+ FT V+ ACA L + +G+ VH +I K G
Sbjct: 247 VTAYAHVGCYNEVLEVFNEMLDDSTEKPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHG 306
Query: 178 ADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFD 357
+ + F L+ MY+ CGK+D ++F + +RD+ +WNSI+SG GL ++A +F
Sbjct: 307 IEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISGLSVHGLGKDALEIFS 366
Query: 358 EMPERGIVSRNV----MINGYSKWGEIDKARELFNEMPT-----RNVESWNIMIAGYAKC 510
EM G + +++ + G +D+AR LF M + VE + M+ +
Sbjct: 367 EMVYEGFKPNGITFIGVLSACNHVGLLDQARRLFEMMNSVYGIEPTVEHYGCMVDLLGRM 426
Query: 511 GLLESSQKV 537
G +E ++++
Sbjct: 427 GKIEEAEEL 435
>ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297313808|gb|EFH44231.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 535
Score = 159 bits (403), Expect = 3e-37
Identities = 81/180 (45%), Positives = 113/180 (62%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IR YANS + +L +F +ML P+ ++F FV+KACA FEEG+Q+H +KS
Sbjct: 82 IRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFMKSDL 141
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
TD+F N LI++Y G + RK+ D RD VSWNS+LS Y++ GL+E A+ LFDE
Sbjct: 142 VTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGLVEEARALFDE 201
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
M ER + S N MI+GY+ G + +ARE+F+ MP ++V SWN M+ YA G +VF
Sbjct: 202 MEERNVESWNFMISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVF 261
Score = 88.6 bits (218), Expect = 9e-16
Identities = 54/189 (28%), Positives = 98/189 (51%), Gaps = 10/189 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTS-PNLFTFPFVIKACAHLVAFEEGQQVHCFILKSG 177
+ YA+ L +F ML + P+ FT V+ ACA L + +G+ VH +I K G
Sbjct: 245 VTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASLGSLSQGEWVHVYIDKHG 304
Query: 178 ADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFD 357
+ + F L+ MY+ CGK+D ++F ++ +RD+ +WNSI++G GL ++A +F
Sbjct: 305 IEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSIITGLSVHGLGKDALEIFS 364
Query: 358 EMPERGIVSRNV----MINGYSKWGEIDKARELFNEMPT-----RNVESWNIMIAGYAKC 510
EM G + +++ + G +D+AR+LF M + +E + M+ +
Sbjct: 365 EMVYEGFKPNGITFIGVLSACNHVGLLDQARKLFEMMNSVYGIEPTIEHYGCMVDLLGRM 424
Query: 511 GLLESSQKV 537
G E ++++
Sbjct: 425 GKFEEAEEL 433
>ref|XP_004295354.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 821
Score = 159 bits (401), Expect = 5e-37
Identities = 77/171 (45%), Positives = 112/171 (65%)
Frame = +1
Query: 28 SQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGADTDLFSVNG 207
S +L LF ++L + +P+ FT P V+KACA L A EG+QVH LK G +++ +
Sbjct: 236 SHDALLLFFRLLHHH-APDNFTLPSVVKACARLGAVAEGKQVHALALKIGLGLEMYVQSS 294
Query: 208 LIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMPERGIVSR 387
L+ +Y+ CG ++ RK+FD ERDLV+WNS++ GY CG ++ A LF+EM ER S
Sbjct: 295 LVSLYSKCGAIECARKVFDEMRERDLVAWNSLIDGYARCGRVDVAVELFEEMEERDEFSW 354
Query: 388 NVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
V+++G SK G + KARE+F MP++NV SWN MI GY K G E ++++F
Sbjct: 355 TVLVDGLSKCGHVKKAREVFERMPSKNVVSWNAMINGYMKGGEFEKARELF 405
Score = 69.3 bits (168), Expect = 6e-10
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GY + +L LF ++L+ + P T V+ A + L A +G+ VH ++K G
Sbjct: 420 ISGYEFNGRFGEALELFREVLEEDVRPTPATLVSVLSAVSGLAALSKGRIVHSVMVKHGF 479
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ + LI MY+ CG +D+ +F+ + + W +I+ G G+ + +LF E
Sbjct: 480 ELEGVLGTSLIDMYSKCGSIDSAMAVFEGIQRKKVGHWTAIIVGLGMHGMADQVLQLFLE 539
Query: 361 MPERGIVSRNV----MINGYSKWGEIDKARELFNEM-------PTRNVESWNIMIAGYAK 507
M G+ + ++N S G +D R FN M PT +E + ++ +
Sbjct: 540 MRTNGMEPHGITFIGILNACSHAGLVDLGRYYFNMMRKDYGIEPT--IEHYGCLVDILCR 597
Query: 508 CGLLESSQKV 537
G L+ ++ +
Sbjct: 598 AGCLDEAKDI 607
>ref|XP_006418526.1| hypothetical protein EUTSA_v10002407mg [Eutrema salsugineum]
gi|557096454|gb|ESQ36962.1| hypothetical protein
EUTSA_v10002407mg [Eutrema salsugineum]
Length = 784
Score = 158 bits (399), Expect = 9e-37
Identities = 77/180 (42%), Positives = 116/180 (64%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I+ Y + S ++ LF ML + P+ FT P V+K C+ L A EEG+Q+H F K G
Sbjct: 188 IKCYVENHRSHDAIRLFCDML-TEFPPDNFTLPCVVKGCSRLCAVEEGKQIHGFSTKLGF 246
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D F + L+ Y+ CG +D RK+FD E+DLV+WNS++ GY G +E A++LFDE
Sbjct: 247 GFDKFVQSSLVSFYSKCGLLDCARKVFDKMGEKDLVTWNSLIDGYARSGDVETARKLFDE 306
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
+P R S +++G+SK G+I+ AR++F++MPT+N+ SWN MI GY + G ES+ ++F
Sbjct: 307 IPRRDSYSWTALLHGFSKSGKIEAARDVFDKMPTKNLVSWNAMINGYMRSGDFESACELF 366
Score = 77.0 bits (188), Expect = 3e-12
Identities = 34/90 (37%), Positives = 58/90 (64%)
Frame = +1
Query: 187 DLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMP 366
D +S L+H ++ GK++A R +FD ++LVSWN++++GY+ G E+A LF+ MP
Sbjct: 311 DSYSWTALLHGFSKSGKIEAARDVFDKMPTKNLVSWNAMINGYMRSGDFESACELFNTMP 370
Query: 367 ERGIVSRNVMINGYSKWGEIDKARELFNEM 456
ER +++ N +I GY +G ++A +F M
Sbjct: 371 ERNLITWNSIIAGYEVYGRFEEALSMFLRM 400
Score = 74.3 bits (181), Expect = 2e-11
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTS----PNLFTFPFVIKACAHLVAFEEGQQVHCFIL 168
I GY + +L +F++ML+ PN TF +I A A G+ VH +++
Sbjct: 381 IAGYEVYGRFEEALSMFLRMLQEEEDDFIKPNNATFTSLISAVAASAILSTGKWVHSYMV 440
Query: 169 KSGADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQR 348
K+G D LI MY+ CG +++ +F + + L WNS++ G G+ + A
Sbjct: 441 KNGMAIDGVIGTLLIEMYSKCGSIESALTVFTSIHRKKLGHWNSVIVGLGMHGMADEALE 500
Query: 349 LFDEMPERGIVSRNV----MINGYSKWGEIDKARELFNEMP-----TRNVESWNIMIAGY 501
LF +M E GI V ++N +S G + +A F+ M R +E + ++
Sbjct: 501 LFKKMQESGIKPNTVTFVGLLNAFSHVGYVKEAHLYFDFMVKKYGIEREIEHYGCLVDVL 560
Query: 502 AKCGLLESSQKV 537
+ G L+ ++ V
Sbjct: 561 CRTGRLQEAKTV 572
>ref|XP_004491829.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cicer arietinum]
Length = 521
Score = 158 bits (399), Expect = 9e-37
Identities = 77/180 (42%), Positives = 116/180 (64%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
IRG + SP ++ L+ QM + P+ +TFPFV+KAC L+ G VH ++ G
Sbjct: 81 IRGSSQSPDPLRAVSLYAQMHYRSLKPDSYTFPFVLKACTKLIWVNTGSAVHGLAVRFGF 140
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
++ F N L+ +A CG + +FD+SC+ D+V+W+S+++GY G L+ A++LFDE
Sbjct: 141 CSNTFVRNALLVFHAKCGDLKVATSIFDDSCKGDVVAWSSLIAGYAKRGDLKVARKLFDE 200
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MPER +VS NVMI GY+K GE++ AR LF+E P ++V SWN +IAGY C L + ++F
Sbjct: 201 MPERDLVSWNVMITGYAKQGEMESARMLFDEAPVKDVVSWNAVIAGYVVCRLNRQALELF 260
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/130 (33%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Frame = +1
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ DL S N +I YA G++++ R LFD + +D+VSWN++++GYV C L A LFDE
Sbjct: 203 ERDLVSWNVMITGYAKQGEMESARMLFDEAPVKDVVSWNAVIAGYVVCRLNRQALELFDE 262
Query: 361 MPERG-----IVSRNVMINGYSKWGEIDKARELFNE-----MPTRNVESWNIMIAGYAKC 510
M G V+ +++ ++ G+++ R++ E M N N ++ YAKC
Sbjct: 263 MSRVGGVYPDEVTLLSLLSACAELGDLENGRKVHAEIMEISMGKVNTLLGNALVDMYAKC 322
Query: 511 GLLESSQKVF 540
G +E + VF
Sbjct: 323 GNIEEAIHVF 332
Score = 68.6 bits (166), Expect = 1e-09
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLK-SNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILK-S 174
I GY ++ +L LF +M + P+ T ++ ACA L E G++VH I++ S
Sbjct: 244 IAGYVVCRLNRQALELFDEMSRVGGVYPDEVTLLSLLSACAELGDLENGRKVHAEIMEIS 303
Query: 175 GADTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLF 354
+ N L+ MYA CG ++ +F + ++D++SWN+++ G G E + LF
Sbjct: 304 MGKVNTLLGNALVDMYAKCGNIEEAIHVFWSIRDKDVISWNTVIVGLAFHGHGEESLGLF 363
Query: 355 DEMPERGIVSRNVMINGY----SKWGEIDKARELFNEMPTR-----NVESWNIMIAGYAK 507
EM I ++ G S G++D+ F+ M + N+ M+ +
Sbjct: 364 KEMLRTKICPNDITFVGVLAACSHAGKVDEGYRYFDLMRSEYKIEPNIRHCGCMVDMLGR 423
Query: 508 CGLLESS 528
GLL +
Sbjct: 424 AGLLNKA 430
>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
Length = 686
Score = 157 bits (398), Expect = 1e-36
Identities = 77/180 (42%), Positives = 115/180 (63%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I+ Y + S ++ LF ++ T P+ FT P VIK CA L A EG+Q+H ++K G
Sbjct: 92 IKCYVENQRSHDAICLFHDLVHEFT-PDCFTLPSVIKGCARLNAVPEGKQIHGLVVKIGF 150
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
D F + L+ MY+ CG++ RK+FD E+DLV WN ++ GY CG +E A +LFDE
Sbjct: 151 GLDKFVQSSLVSMYSRCGEMGYARKVFDQMGEKDLVLWNCLIDGYARCGEVEIALQLFDE 210
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEMPTRNVESWNIMIAGYAKCGLLESSQKVF 540
MPER S +++G+SK G ++ AR++F+ MP+RN+ SWN MI GY K G +E ++++F
Sbjct: 211 MPERDYFSWTCLVDGFSKCGRVEMARDVFDRMPSRNLVSWNAMINGYMKSGDVEMARRLF 270
Score = 79.0 bits (193), Expect = 7e-13
Identities = 39/92 (42%), Positives = 59/92 (64%)
Frame = +1
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+ D FS L+ ++ CG+V+ R +FD R+LVSWN++++GY+ G +E A+RLFDE
Sbjct: 213 ERDYFSWTCLVDGFSKCGRVEMARDVFDRMPSRNLVSWNAMINGYMKSGDVEMARRLFDE 272
Query: 361 MPERGIVSRNVMINGYSKWGEIDKARELFNEM 456
MP R +++ N MI GY G+ +A LF M
Sbjct: 273 MPTRDVITWNSMIAGYEFNGKFMEALYLFIAM 304
Score = 78.2 bits (191), Expect = 1e-12
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 9/188 (4%)
Frame = +1
Query: 1 IRGYANSPFSQPSLHLFIQMLKSNTSPNLFTFPFVIKACAHLVAFEEGQQVHCFILKSGA 180
I GY + +L+LFI MLK PN TF + A + L +G+ +H ++K G
Sbjct: 285 IAGYEFNGKFMEALYLFIAMLKEGLVPNHTTFVGALSAVSGLAVLSKGKWIHSLMVKCGI 344
Query: 181 DTDLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDE 360
+++ LI MY+ CG V++ +F ++ L W +I+ G G+ E A +F E
Sbjct: 345 ESEGVLGTSLIEMYSKCGSVESALSVFRAISKKKLGHWTAIIVGLGMHGMAERALEMFSE 404
Query: 361 MPERGIVSRNV----MINGYSKWGEIDKARELFNEMPT-----RNVESWNIMIAGYAKCG 513
M G+ + ++N S G ++ R FN M +E + ++ + G
Sbjct: 405 MRRTGLQPHAITFLGVLNACSHAGLVELVRHYFNMMTNDYGIEPTIEHYGCLVFILCRVG 464
Query: 514 LLESSQKV 537
LE ++ +
Sbjct: 465 NLEEAKDI 472
Score = 61.6 bits (148), Expect = 1e-07
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 8/126 (6%)
Frame = +1
Query: 187 DLFSVNGLIHMYATCGKVDAGRKLFDNSCERDLVSWNSILSGYVNCGLLENAQRLFDEMP 366
+L S N +I+ Y G V+ R+LFD RD+++WNS+++GY G A LF M
Sbjct: 246 NLVSWNAMINGYMKSGDVEMARRLFDEMPTRDVITWNSMIAGYEFNGKFMEALYLFIAML 305
Query: 367 ERGIVSRNV----MINGYSKWGEIDKARELFNEMPTRNVESWNI----MIAGYAKCGLLE 522
+ G+V + ++ S + K + + + M +ES + +I Y+KCG +E
Sbjct: 306 KEGLVPNHTTFVGALSAVSGLAVLSKGKWIHSLMVKCGIESEGVLGTSLIEMYSKCGSVE 365
Query: 523 SSQKVF 540
S+ VF
Sbjct: 366 SALSVF 371