BLASTX nr result
ID: Sinomenium22_contig00035646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00035646
(508 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007213929.1| hypothetical protein PRUPE_ppa004435mg [Prun... 194 1e-47
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 191 7e-47
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 191 7e-47
ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3... 186 3e-45
ref|XP_007213829.1| hypothetical protein PRUPE_ppa004506mg [Prun... 184 1e-44
ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citr... 183 2e-44
ref|XP_004288350.1| PREDICTED: 60S ribosomal export protein NMD3... 182 5e-44
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3... 181 9e-44
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3... 181 9e-44
ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3... 180 2e-43
ref|XP_004241026.1| PREDICTED: 60S ribosomal export protein NMD3... 180 2e-43
ref|XP_004296646.1| PREDICTED: 60S ribosomal export protein NMD3... 177 2e-42
ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3... 175 5e-42
ref|XP_004250232.1| PREDICTED: 60S ribosomal export protein NMD3... 174 1e-41
emb|CBI29817.3| unnamed protein product [Vitis vinifera] 174 1e-41
ref|XP_002278623.1| PREDICTED: 60S ribosomal export protein NMD3... 174 1e-41
gb|EYU19702.1| hypothetical protein MIMGU_mgv1a003785mg [Mimulus... 171 1e-40
ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3... 171 1e-40
ref|XP_002876899.1| nonsense-mediated mRNA decay NMD3 family pro... 171 1e-40
dbj|BAH57009.1| AT2G03820 [Arabidopsis thaliana] 171 1e-40
>ref|XP_007213929.1| hypothetical protein PRUPE_ppa004435mg [Prunus persica]
gi|462409794|gb|EMJ15128.1| hypothetical protein
PRUPE_ppa004435mg [Prunus persica]
Length = 510
Score = 194 bits (493), Expect = 1e-47
Identities = 88/99 (88%), Positives = 95/99 (95%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MAEE GMF VHQT+GSVLCC+CGIPMAPNAANMCVKCLRSEVDITEGLQKHV I++CPEC
Sbjct: 1 MAEEAGMFMVHQTVGSVLCCKCGIPMAPNAANMCVKCLRSEVDITEGLQKHVTIVHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
+ YLQPPRTWIKAQLESKELLTFC+KRLKNLNK+RLVHA
Sbjct: 61 DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNKVRLVHA 99
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
Length = 510
Score = 191 bits (486), Expect = 7e-47
Identities = 84/99 (84%), Positives = 95/99 (95%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MAEE GMF VHQT+GSVLCC+CGIPM PNAANMCVKCLRSE+DITEGLQKHV I++CPEC
Sbjct: 1 MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
++YLQPP+TWIKAQLESKELLTFC+KRLKNLNK+RL+HA
Sbjct: 61 DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHA 99
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 191 bits (486), Expect = 7e-47
Identities = 84/99 (84%), Positives = 95/99 (95%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MAEE GMF VHQT+GSVLCC+CGIPM PNAANMCVKCLRSE+DITEGLQKHV I++CPEC
Sbjct: 1 MAEEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
++YLQPP+TWIKAQLESKELLTFC+KRLKNLNK+RL+HA
Sbjct: 61 DTYLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHA 99
>ref|XP_006482393.1| PREDICTED: 60S ribosomal export protein NMD3-like, partial [Citrus
sinensis]
Length = 523
Score = 186 bits (472), Expect = 3e-45
Identities = 85/102 (83%), Positives = 95/102 (93%)
Frame = -2
Query: 306 IIAMAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYC 127
II MA++ GMF V QT+GSVLCC+CGIPMAPNAANMCV CLRSEVDITEGLQKHVII +C
Sbjct: 11 IITMAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHC 70
Query: 126 PECESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
PEC+ YLQPPRTWIKAQLESKELLTFC+KRLKNLN++RLV+A
Sbjct: 71 PECDCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNA 112
>ref|XP_007213829.1| hypothetical protein PRUPE_ppa004506mg [Prunus persica]
gi|462409694|gb|EMJ15028.1| hypothetical protein
PRUPE_ppa004506mg [Prunus persica]
Length = 506
Score = 184 bits (467), Expect = 1e-44
Identities = 83/93 (89%), Positives = 89/93 (95%)
Frame = -2
Query: 279 MFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPECESYLQP 100
MF VHQT+GSVLCC+CGIPMAPNAANMCVKCLRSEVDITEGLQKHV I++CPEC YLQP
Sbjct: 1 MFMVHQTVGSVLCCKCGIPMAPNAANMCVKCLRSEVDITEGLQKHVTIVHCPECNCYLQP 60
Query: 99 PRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
PRTWIKAQLESKELLTFC+KRLKNLNK+RLVHA
Sbjct: 61 PRTWIKAQLESKELLTFCVKRLKNLNKVRLVHA 93
>ref|XP_006430673.1| hypothetical protein CICLE_v10011515mg [Citrus clementina]
gi|557532730|gb|ESR43913.1| hypothetical protein
CICLE_v10011515mg [Citrus clementina]
Length = 511
Score = 183 bits (464), Expect = 2e-44
Identities = 83/99 (83%), Positives = 93/99 (93%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MA++ GMF V QT+GSVLCC+CGIPMAPNAANMCV CLRSEVDITEGLQKHVII +CPEC
Sbjct: 1 MAQDAGMFTVPQTVGSVLCCKCGIPMAPNAANMCVACLRSEVDITEGLQKHVIISHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
+ YLQPPRTWIKAQLESKELLTFC+KRLKNLN++RLV+A
Sbjct: 61 DCYLQPPRTWIKAQLESKELLTFCVKRLKNLNRVRLVNA 99
>ref|XP_004288350.1| PREDICTED: 60S ribosomal export protein NMD3-like [Fragaria vesca
subsp. vesca]
Length = 515
Score = 182 bits (461), Expect = 5e-44
Identities = 82/96 (85%), Positives = 92/96 (95%)
Frame = -2
Query: 288 EMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPECESY 109
+ GMF V QT+GSVLCC+CGIPMAPNAANMCVKCLRSEVDITEGLQKHV I++CPEC+++
Sbjct: 4 DTGMFTVPQTVGSVLCCKCGIPMAPNAANMCVKCLRSEVDITEGLQKHVTIVHCPECDTW 63
Query: 108 LQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
LQPPRTWIKAQ+ESKELLTFC+KRLKNLNKIRLVHA
Sbjct: 64 LQPPRTWIKAQVESKELLTFCVKRLKNLNKIRLVHA 99
>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 181 bits (459), Expect = 9e-44
Identities = 83/99 (83%), Positives = 92/99 (92%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MA E G+F V QTIG+VLCC+CGIPMAPNAANMCVKCL SEVDITEGLQK + IM+CP+C
Sbjct: 1 MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNK++LVHA
Sbjct: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHA 99
>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
Length = 505
Score = 181 bits (459), Expect = 9e-44
Identities = 83/99 (83%), Positives = 92/99 (92%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MA E G+F V QTIG+VLCC+CGIPMAPNAANMCVKCL SEVDITEGLQK + IM+CP+C
Sbjct: 1 MAAETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
ESYLQPPRTWIKAQLESKELLTFCIKRL+NLNK++LVHA
Sbjct: 61 ESYLQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHA 99
>ref|XP_006350665.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
tuberosum]
Length = 511
Score = 180 bits (457), Expect = 2e-43
Identities = 81/99 (81%), Positives = 90/99 (90%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MA++ GMF VH TIG+VLCC+CGI M PNAANMC CLRSE+DITEGLQKHVII +CPEC
Sbjct: 1 MAQDTGMFTVHHTIGNVLCCKCGISMQPNAANMCANCLRSEIDITEGLQKHVIICHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
+SYLQPPRTWIKAQLESKELLTFC+KRLKNLNK+RLV A
Sbjct: 61 DSYLQPPRTWIKAQLESKELLTFCVKRLKNLNKVRLVQA 99
>ref|XP_004241026.1| PREDICTED: 60S ribosomal export protein NMD3-like isoform 1
[Solanum lycopersicum] gi|460390829|ref|XP_004241027.1|
PREDICTED: 60S ribosomal export protein NMD3-like
isoform 2 [Solanum lycopersicum]
Length = 511
Score = 180 bits (457), Expect = 2e-43
Identities = 81/99 (81%), Positives = 90/99 (90%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MA++ GMF VH TIG+VLCC+CGI M PNAANMC CLRSE+DITEGLQKHVII +CPEC
Sbjct: 1 MAQDTGMFTVHHTIGNVLCCKCGISMQPNAANMCANCLRSEIDITEGLQKHVIICHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
+SYLQPPRTWIKAQLESKELLTFC+KRLKNLNK+RLV A
Sbjct: 61 DSYLQPPRTWIKAQLESKELLTFCVKRLKNLNKVRLVQA 99
>ref|XP_004296646.1| PREDICTED: 60S ribosomal export protein NMD3-like [Fragaria vesca
subsp. vesca]
Length = 511
Score = 177 bits (448), Expect = 2e-42
Identities = 80/97 (82%), Positives = 90/97 (92%)
Frame = -2
Query: 291 EEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPECES 112
EE GMF V QT+GSVLCC+CGI M PNAANMCVKCLRSEVDITEGLQK V I++CPECE+
Sbjct: 4 EEAGMFVVQQTVGSVLCCKCGISMTPNAANMCVKCLRSEVDITEGLQKQVTILHCPECET 63
Query: 111 YLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
YLQPPRTWIKAQLESKELL+FCI+R+KNLNK++LVHA
Sbjct: 64 YLQPPRTWIKAQLESKELLSFCIRRVKNLNKVKLVHA 100
>ref|XP_006352400.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
tuberosum]
Length = 511
Score = 175 bits (444), Expect = 5e-42
Identities = 79/99 (79%), Positives = 91/99 (91%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MAE +GMF V QTIG+VLCC+CGI M PNAANMC KCLRSEVDITE LQKHV+I++CPEC
Sbjct: 1 MAEVLGMFTVQQTIGNVLCCKCGISMQPNAANMCAKCLRSEVDITEDLQKHVVIVHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
+ YLQPPR+WIKAQLESKELLTFCIK+LKNLNK++LV+A
Sbjct: 61 DGYLQPPRSWIKAQLESKELLTFCIKKLKNLNKVKLVNA 99
>ref|XP_004250232.1| PREDICTED: 60S ribosomal export protein NMD3-like [Solanum
lycopersicum]
Length = 508
Score = 174 bits (440), Expect = 1e-41
Identities = 78/98 (79%), Positives = 90/98 (91%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MAE +GMF V QTIG+VLCC+CGI M PNAANMC KCLRSEVDITE LQKHV+I++CPEC
Sbjct: 1 MAEVLGMFTVQQTIGNVLCCKCGISMQPNAANMCAKCLRSEVDITEDLQKHVVIIHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVH 4
+ YLQPPR+WIKAQLESKELLTFCIK+LKNLNK++LV+
Sbjct: 61 DGYLQPPRSWIKAQLESKELLTFCIKKLKNLNKVKLVN 98
>emb|CBI29817.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 174 bits (440), Expect = 1e-41
Identities = 75/99 (75%), Positives = 88/99 (88%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
M EE GMFRVH TIGSVLCC+CGIPM PNAANMCVKCLR+EVDITEGLQKH +++CPEC
Sbjct: 33 MTEEAGMFRVHHTIGSVLCCKCGIPMTPNAANMCVKCLRTEVDITEGLQKHATLVHCPEC 92
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
+ Y +PP+TWI+ QLESKELLT C+K LKNLN++RL+HA
Sbjct: 93 DRYFRPPKTWIEPQLESKELLTLCLKTLKNLNQVRLIHA 131
>ref|XP_002278623.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
Length = 489
Score = 174 bits (440), Expect = 1e-41
Identities = 75/99 (75%), Positives = 88/99 (88%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
M EE GMFRVH TIGSVLCC+CGIPM PNAANMCVKCLR+EVDITEGLQKH +++CPEC
Sbjct: 1 MTEEAGMFRVHHTIGSVLCCKCGIPMTPNAANMCVKCLRTEVDITEGLQKHATLVHCPEC 60
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
+ Y +PP+TWI+ QLESKELLT C+K LKNLN++RL+HA
Sbjct: 61 DRYFRPPKTWIEPQLESKELLTLCLKTLKNLNQVRLIHA 99
>gb|EYU19702.1| hypothetical protein MIMGU_mgv1a003785mg [Mimulus guttatus]
Length = 516
Score = 171 bits (433), Expect = 1e-40
Identities = 77/100 (77%), Positives = 88/100 (88%)
Frame = -2
Query: 300 AMAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPE 121
AM ++ GMF V TIGSVLCC+CGI M PNAANMC KCLRSE+DITEGLQK V I++CPE
Sbjct: 4 AMEQDSGMFTVQSTIGSVLCCKCGILMQPNAANMCAKCLRSEIDITEGLQKSVTIIHCPE 63
Query: 120 CESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
C++YLQPPRTWIKA LESKELLTFC+K+LKNLN +RLVHA
Sbjct: 64 CDTYLQPPRTWIKANLESKELLTFCVKKLKNLNTVRLVHA 103
>ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3-like [Glycine max]
Length = 510
Score = 171 bits (433), Expect = 1e-40
Identities = 78/102 (76%), Positives = 92/102 (90%), Gaps = 3/102 (2%)
Frame = -2
Query: 297 MAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCPEC 118
MA+E GMF V+QTIGSVLCC+CGIPM PNAANMCVKCLRSEVDITEGL K +++++CPEC
Sbjct: 7 MAQESGMFMVNQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPEC 66
Query: 117 ESYLQPPRTWIKAQLESKELLTFCIKRLK---NLNKIRLVHA 1
ESYLQPPR+W+K QLESKELLTFC+K+L+ N NK+RLVHA
Sbjct: 67 ESYLQPPRSWVKLQLESKELLTFCLKKLQKNLNSNKVRLVHA 108
>ref|XP_002876899.1| nonsense-mediated mRNA decay NMD3 family protein [Arabidopsis
lyrata subsp. lyrata] gi|297322737|gb|EFH53158.1|
nonsense-mediated mRNA decay NMD3 family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 516
Score = 171 bits (432), Expect = 1e-40
Identities = 77/101 (76%), Positives = 88/101 (87%)
Frame = -2
Query: 303 IAMAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCP 124
+++ +E GMF V QTIGSVLCC+CG+PMAPNAANMCV CLRSEVDITEGLQK + I YCP
Sbjct: 1 MSVMDESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCP 60
Query: 123 ECESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
EC YLQPP+TWIK Q ESKELLTFCIKRLKNLNK++L +A
Sbjct: 61 ECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNA 101
>dbj|BAH57009.1| AT2G03820 [Arabidopsis thaliana]
Length = 392
Score = 171 bits (432), Expect = 1e-40
Identities = 77/101 (76%), Positives = 88/101 (87%)
Frame = -2
Query: 303 IAMAEEMGMFRVHQTIGSVLCCRCGIPMAPNAANMCVKCLRSEVDITEGLQKHVIIMYCP 124
+++ +E GMF V QTIGSVLCC+CG+PMAPNAANMCV CLRSEVDITEGLQK + I YCP
Sbjct: 1 MSVMDESGMFNVQQTIGSVLCCKCGVPMAPNAANMCVNCLRSEVDITEGLQKSIQIFYCP 60
Query: 123 ECESYLQPPRTWIKAQLESKELLTFCIKRLKNLNKIRLVHA 1
EC YLQPP+TWIK Q ESKELLTFCIKRLKNLNK++L +A
Sbjct: 61 ECTCYLQPPKTWIKCQWESKELLTFCIKRLKNLNKVKLKNA 101