BLASTX nr result

ID: Sinomenium22_contig00035443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00035443
         (401 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB00038.1| reverse transcriptase family member [Glycine max]       62   1e-07
emb|CCH50976.1| T4.15 [Malus x robusta]                                60   4e-07
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    60   4e-07
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    59   5e-07
ref|XP_003607688.1| Pentatricopeptide repeat-containing protein ...    59   9e-07
gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]             58   2e-06
gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);...    58   2e-06
ref|XP_003609037.1| ABC transporter A family member [Medicago tr...    57   2e-06
gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]      57   3e-06
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]      56   4e-06
ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago ...    56   6e-06
gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medi...    56   6e-06
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]      55   8e-06

>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QH NK+ V EMRMLRW+CGKT
Sbjct: 248 YGTECWAVKSQHENKVGVAEMRMLRWMCGKT 278


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QHV+K+ V EMRMLRW+CG T
Sbjct: 856 YGTECWAVKHQHVHKMGVAEMRMLRWMCGHT 886


>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 195

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QH N++SVTEMRMLRW+ GKT
Sbjct: 140 YGTECWAVKSQHENQVSVTEMRMLRWMSGKT 170


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QHV+K+ V EMRMLRW+CG T
Sbjct: 82  YGTECWAVKYQHVHKMGVAEMRMLRWMCGHT 112


>ref|XP_003607688.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508743|gb|AES89885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1353

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QH NK+SV +MRMLRW+ GKT
Sbjct: 358 YGTECWAVKNQHENKVSVAQMRMLRWLSGKT 388


>gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]
          Length = 137

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QH N++SV EMRMLRW+ GKT
Sbjct: 68  YGTECWAVKSQHENQVSVVEMRMLRWMSGKT 98


>gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding
           EF-hand [Medicago truncatula]
          Length = 559

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 23/31 (74%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QH N++SV EMRMLRW+ GKT
Sbjct: 290 YGTECWAVKSQHENQVSVAEMRMLRWMSGKT 320


>ref|XP_003609037.1| ABC transporter A family member [Medicago truncatula]
           gi|355510092|gb|AES91234.1| ABC transporter A family
           member [Medicago truncatula]
          Length = 1083

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K Q  NKLSV EMRML W+CGKT
Sbjct: 353 YGTECWAVKNQGENKLSVAEMRMLCWMCGKT 383


>gb|EXB60461.1| hypothetical protein L484_014914 [Morus notabilis]
          Length = 714

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 28/31 (90%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YG+ECWAIK+QH++K+SV EMRMLRW+ G T
Sbjct: 480 YGSECWAIKRQHISKMSVAEMRMLRWMSGHT 510


>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
          Length = 1413

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 21/31 (67%), Positives = 29/31 (93%)
 Frame = -3

Query: 93   YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
            YG++CWAIK+QH++K+SV EMRMLRW+ G+T
Sbjct: 969  YGSKCWAIKRQHISKMSVAEMRMLRWMSGQT 999


>ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago truncatula]
            gi|355477563|gb|AES58766.1| hypothetical protein
            MTR_1g008050 [Medicago truncatula]
          Length = 1675

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 93   YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
            YGTECW +K QH +K+SV EMRMLRW+ GKT
Sbjct: 1267 YGTECWVVKSQHESKVSVAEMRMLRWMSGKT 1297


>gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medicago truncatula]
          Length = 104

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 22/31 (70%), Positives = 26/31 (83%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YGTECWA+K QH N++SV EM MLRW+ GKT
Sbjct: 49  YGTECWAVKSQHENQISVAEMMMLRWMSGKT 79


>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
          Length = 670

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = -3

Query: 93  YGTECWAIKKQHVNKLSVTEMRMLRWICGKT 1
           YG+ECWAIK+QH+ K+SV EMRMLRW+ G T
Sbjct: 532 YGSECWAIKRQHIAKMSVIEMRMLRWMSGHT 562


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