BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00035340
         (831 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30973.3| unnamed protein product [Vitis vinifera]              351   2e-94
ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   343   3e-92
ref|XP_007046481.1| Pentatricopeptide repeat-containing protein,...   328   2e-87
ref|XP_002307219.2| hypothetical protein POPTR_0005s10540g [Popu...   325   1e-86
ref|XP_004308566.1| PREDICTED: pentatricopeptide repeat-containi...   320   3e-85
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   307   4e-81
ref|XP_007219485.1| hypothetical protein PRUPE_ppa022097mg, part...   304   2e-80
ref|XP_004247300.1| PREDICTED: pentatricopeptide repeat-containi...   290   6e-76
ref|XP_006350309.1| PREDICTED: pentatricopeptide repeat-containi...   287   4e-75
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...   284   2e-74
ref|XP_007158017.1| hypothetical protein PHAVU_002G117300g [Phas...   283   7e-74
ref|XP_003612374.1| Pentatricopeptide repeat-containing protein ...   281   2e-73
gb|EXC65018.1| hypothetical protein L484_000081 [Morus notabilis]     280   4e-73
gb|EXC26653.1| hypothetical protein L484_000875 [Morus notabilis]     280   4e-73
ref|XP_006467094.1| PREDICTED: pentatricopeptide repeat-containi...   278   2e-72
ref|XP_006425269.1| hypothetical protein CICLE_v10026953mg [Citr...   272   1e-70
ref|XP_004512279.1| PREDICTED: pentatricopeptide repeat-containi...   271   2e-70
ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arab...   248   2e-63
ref|NP_671862.1| pentatricopeptide repeat-containing protein [Ar...   246   6e-63
gb|AAO72718.1| pentatricopeptide repeat-containing protein [Arab...   246   6e-63

>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  351 bits (900), Expect = 2e-94
 Identities = 165/260 (63%), Positives = 210/260 (80%), Gaps = 1/260 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            AIDL  +MK DGI+ NF TY+T+I G C  GR+EDG K+L+LMEESRG AG +I+PYN+I
Sbjct: 271  AIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSI 330

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYGLYK+N+  +A+ FLTKME +FPRAVDRS RI+ FC +G   +AK+VY+QMI EG +P
Sbjct: 331  IYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVP 390

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S LVYV LI+G C++G+VREAFE++NEMV H YFP A TFNA+IS FC QGKVGSA KLM
Sbjct: 391  SVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLM 450

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+MVGRGC PD+GS+SP++ ALC KGDFQ+AV   L+MVEK ++PD  TW S+LLCL+QE
Sbjct: 451  EDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 510

Query: 720  RIWLEGKNMLQVTSFLCRIC 779
             +WLEG N+  +T++  R+C
Sbjct: 511  TVWLEGDNLFHLTAYRERLC 530



 Score =  105 bits (261), Expect = 3e-20
 Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 5/237 (2%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           IDL RE     M M+G+  +  T+  ++ G CL  R+ D  K+L +M+ SRG       Y
Sbjct: 61  IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMK-SRGKTPNTVIY 119

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +I+ L K  ++ +A   + +M  V P  V  +  I ++C++    +A  + E+    G
Sbjct: 120 NTMIHALCKNGKVGRARSLMNEM--VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMG 177

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC+ G V E  EV+  + S         +N +I GFC  GK     
Sbjct: 178 FVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGH 237

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           +++++M  +GC P+V +++ L    C+ G    A+     M   G+  +  T+ +L+
Sbjct: 238 RVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLI 294



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 41/124 (33%), Positives = 61/124 (49%)
 Frame = +3

Query: 381 LINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGRG 560
           L+ GLC    + +AF+++  M S    P    +N +I   CK GKVG A  LM EMV   
Sbjct: 87  LMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE-- 144

Query: 561 CCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQERIWLEGK 740
             P   +F+ LI A C++ +  +A+  L K    G VPD  T   ++  L +     EG 
Sbjct: 145 --PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGV 202

Query: 741 NMLQ 752
            +L+
Sbjct: 203 EVLE 206


>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  343 bits (881), Expect = 3e-92
 Identities = 162/252 (64%), Positives = 204/252 (80%), Gaps = 1/252 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            AIDL  +MK DGI+ NF TY+T+I G C  GR+EDG K+L+LMEESRG AG +I+PYN+I
Sbjct: 423  AIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSI 482

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYGLYK+N+  +A+ FLTKME +FPRAVDRS RI+ FC +G   +AK+VY+QMI EG +P
Sbjct: 483  IYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVP 542

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S LVYV LI+G C++G+VREAFE++NEMV H YFP A TFNA+IS FC QGKVGSA KLM
Sbjct: 543  SVLVYVCLIHGFCQDGNVREAFELINEMVDHGYFPTAPTFNALISAFCGQGKVGSALKLM 602

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+MVGRGC PD+GS+SP++ ALC KGDFQ+AV   L+MVEK ++PD  TW S+LLCL+QE
Sbjct: 603  EDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDILPDYSTWNSMLLCLTQE 662

Query: 720  RIWLEGKNMLQV 755
             +WLEG N+  +
Sbjct: 663  TVWLEGDNLFHL 674



 Score =  105 bits (261), Expect = 3e-20
 Identities = 64/237 (27%), Positives = 115/237 (48%), Gaps = 5/237 (2%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           IDL RE     M M+G+  +  T+  ++ G CL  R+ D  K+L +M+ SRG       Y
Sbjct: 213 IDLAREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMK-SRGKTPNTVIY 271

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +I+ L K  ++ +A   + +M  V P  V  +  I ++C++    +A  + E+    G
Sbjct: 272 NTMIHALCKNGKVGRARSLMNEM--VEPSDVTFNVLISAYCQEENLVQALVLLEKSFSMG 329

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC+ G V E  EV+  + S         +N +I GFC  GK     
Sbjct: 330 FVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGH 389

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           +++++M  +GC P+V +++ L    C+ G    A+     M   G+  +  T+ +L+
Sbjct: 390 RVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLI 446



 Score = 75.9 bits (185), Expect = 2e-11
 Identities = 67/245 (27%), Positives = 111/245 (45%), Gaps = 9/245 (3%)
 Frame = +3

Query: 45  PNF----ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLN 212
           PNF    +TY  +I   C   R E   ++LD M  S G     + +  I+ GL +   + 
Sbjct: 121 PNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVR 180

Query: 213 KAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAE----AKKVY-EQMIGEGDLPSALVYV 377
           + ++ L   + +     + S +I +   D +  E    A++ Y ++M+  G       + 
Sbjct: 181 QMIKVL---DLITKFGENPSLKIFNSILDVLVKEDIDLAREFYRKKMMMNGVSGDDYTFG 237

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            L+ GLC    + +AF+++  M S    P    +N +I   CK GKVG A  LM EMV  
Sbjct: 238 ILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMVE- 296

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQERIWLEG 737
              P   +F+ LI A C++ +  +A+  L K    G VPD  T   ++  L +     EG
Sbjct: 297 ---PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEG 353

Query: 738 KNMLQ 752
             +L+
Sbjct: 354 VEVLE 358


>ref|XP_007046481.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508698742|gb|EOX90638.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 639

 Score =  328 bits (840), Expect = 2e-87
 Identities = 159/262 (60%), Positives = 201/262 (76%), Gaps = 1/262 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPA-GQITPYNNI 179
            A+D+  EMK  GI  NF TY+ +I G C  GR+EDG K+L+LMEES+G + G I PYN++
Sbjct: 378  ALDMFNEMKTVGISWNFVTYDALIKGLCSGGRMEDGFKILELMEESKGGSRGHIRPYNSV 437

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            +YGLYKENRL +A+ FL+KM+++FP+AVDRS  I+ FCE+G   +AK+VY+QM GEG +P
Sbjct: 438  LYGLYKENRLEEALEFLSKMQNLFPKAVDRSLTILGFCEEGSIEDAKRVYDQMAGEGGIP 497

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S LVY  LI G C +G VR A E+MNEMV  +YFP+ASTFNA+ISGFC QGK GSA KLM
Sbjct: 498  SVLVYDCLICGFCLKGCVRNAVELMNEMVGCDYFPVASTFNAVISGFCTQGKFGSALKLM 557

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+MVGRGC PD GS+SPLI ALC KGD Q+AV  LL+M++K ++PD  TW S+L+CLSQE
Sbjct: 558  EDMVGRGCIPDRGSYSPLINALCMKGDIQKAVMLLLQMLQKSIIPDDLTWNSVLVCLSQE 617

Query: 720  RIWLEGKNMLQVTSFLCRICET 785
            R WL+ K  L V + L RI ET
Sbjct: 618  REWLKSKKALHVNNLLQRIIET 639



 Score =  100 bits (248), Expect = 9e-19
 Identities = 57/228 (25%), Positives = 111/228 (48%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           ++M   G+  +  T+  ++ G CL  R+ D  K+L L++ S      +  YN +I+ L +
Sbjct: 177 KKMMSTGVQGDDYTFGILMKGLCLTNRIADAFKLLQLIKSSPVKPNTVM-YNTLIHALCR 235

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   + +M+   P  V  +  I ++C++    +A  + E+    G +P  +   
Sbjct: 236 YGKVGRARSLMNEMQD--PNDVTFNVLISAYCKEENLVQALVLVERSFTMGFVPDVITLT 293

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC  G V EA E++  + S          N +I+G+C+  KV    +L++EM  +
Sbjct: 294 KVLKILCNAGRVAEALEILERVESKGGVVDVLAHNTLINGYCRIAKVKLGQRLLKEMERK 353

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           GC P+  S++ LI   CE G    A+    +M   G+  +  T+ +L+
Sbjct: 354 GCLPNADSYNILISGFCESGMLDSALDMFNEMKTVGISWNFVTYDALI 401



 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
 Frame = +3

Query: 3   AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNII 182
           A  LL+ +K   + PN   YNT+I   C  G+V    +   LM E + P   +T +N +I
Sbjct: 207 AFKLLQLIKSSPVKPNTVMYNTLIHALCRYGKVG---RARSLMNEMQDP-NDVT-FNVLI 261

Query: 183 YGLYKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDL 356
               KE  L +A+  + +  ++   P  +  +  +   C  G  AEA ++ E++  +G +
Sbjct: 262 SAYCKEENLVQALVLVERSFTMGFVPDVITLTKVLKILCNAGRVAEALEILERVESKGGV 321

Query: 357 PSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKL 536
              L + +LING CR   V+    ++ EM      P A ++N +ISGFC+ G + SA  +
Sbjct: 322 VDVLAHNTLINGYCRIAKVKLGQRLLKEMERKGCLPNADSYNILISGFCESGMLDSALDM 381

Query: 537 MEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVE 659
             EM   G   +  ++  LI  LC  G  +     L  M E
Sbjct: 382 FNEMKTVGISWNFVTYDALIKGLCSGGRMEDGFKILELMEE 422



 Score = 60.5 bits (145), Expect = 8e-07
 Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 10/232 (4%)
 Frame = +3

Query: 45  PNF----ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLN 212
           PNF    +TY  +I   C         ++LD M  S G    + P  +I+  L +     
Sbjct: 76  PNFTHSQSTYRALIHKLCAFRCFNTVNELLDEMPTSLG----VPPDEDILVALVRGLGRA 131

Query: 213 KAVRFLTKMESVFPRAVDR-SFRIISFCEDGVNAE----AKKVY-EQMIGEGDLPSALVY 374
           + VR + K+  +  +  +  S +I +   D +  E    A+  Y ++M+  G       +
Sbjct: 132 RMVRNVIKVLDLASKFHNTPSLKIFNSILDVLVKEDIDLARNFYRKKMMSTGVQGDDYTF 191

Query: 375 VSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVG 554
             L+ GLC    + +AF+++  + S    P    +N +I   C+ GKVG A  LM EM  
Sbjct: 192 GILMKGLCLTNRIADAFKLLQLIKSSPVKPNTVMYNTLIHALCRYGKVGRARSLMNEMQD 251

Query: 555 RGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCL 710
               P+  +F+ LI A C++ +  +A+  + +    G VPD  T   +L  L
Sbjct: 252 ----PNDVTFNVLISAYCKEENLVQALVLVERSFTMGFVPDVITLTKVLKIL 299


>ref|XP_002307219.2| hypothetical protein POPTR_0005s10540g [Populus trichocarpa]
            gi|550338572|gb|EEE94215.2| hypothetical protein
            POPTR_0005s10540g [Populus trichocarpa]
          Length = 532

 Score =  325 bits (833), Expect = 1e-86
 Identities = 157/261 (60%), Positives = 199/261 (76%), Gaps = 1/261 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            A+D+  +MK DGI+ NF T++T+I G   RGR EDG K+L+LMEE+RG  G  I+PYN++
Sbjct: 271  ALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYNSV 330

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            +YGLY++N LN+A+ FL KME++FPRAVDRS RI+ FCE+G   EAK+VY+QM  EG +P
Sbjct: 331  LYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGGIP 390

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            SALVY  LI+G C+EG VREA E+MNEMV   YFP+ASTFNA+ISGFC+ GK GSA KL+
Sbjct: 391  SALVYDCLIHGFCQEGCVREALELMNEMVFLGYFPVASTFNALISGFCRLGKDGSALKLL 450

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+MVGRGC PD GS+SPLI ALC K  FQ+A   LL+MVE G+ PD   W SL  CLSQ+
Sbjct: 451  EDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGITPDYLIWNSLFHCLSQQ 510

Query: 720  RIWLEGKNMLQVTSFLCRICE 782
             IWLE  NM +V + + +I E
Sbjct: 511  TIWLESNNMFRVHNLVEQIVE 531



 Score =  104 bits (260), Expect = 4e-20
 Identities = 65/260 (25%), Positives = 122/260 (46%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           ++M   GI  +  TY  ++ G CL  R+ +G K+L +++ SRG    +  YN +++ L  
Sbjct: 70  KKMMGAGIQGDDYTYGILMKGLCLTNRIGEGFKLLQVIK-SRGLKPNVVIYNTLLHALCN 128

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   + +++   P  V  +  I  +C++    +A  + E+    G +P  +   
Sbjct: 129 NGKVGRARSLMNEIKE--PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVT 186

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC  G V EA E++  + S          N +I GFCK GKV     L++EM  +
Sbjct: 187 KVVEILCNVGRVTEAVEILERVESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERK 246

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQERIWLEG 737
           GC P+  +++ LI   CE G  + A+     M   G+  +  T+ +L+  L       +G
Sbjct: 247 GCLPNADTYNALISGFCESGMLESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDG 306

Query: 738 KNMLQVTSFLCRICETTCIP 797
             +L++      +C  +  P
Sbjct: 307 FKILELMEETRGVCGGSISP 326



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 62/204 (30%), Positives = 101/204 (49%), Gaps = 2/204 (0%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL+ +K  G+ PN   YNT++   C  G+V    +   LM E + P   +T +N +I G 
Sbjct: 103 LLQVIKSRGLKPNVVIYNTLLHALCNNGKVG---RARSLMNEIKEP-NDVT-FNVLICGY 157

Query: 192 YKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
            KE+   +A+  L K  S+   P  V  +  +   C  G   EA ++ E++  +G +   
Sbjct: 158 CKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDV 217

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + + +LI G C+ G V+    ++ EM      P A T+NA+ISGFC+ G + SA  +  +
Sbjct: 218 VAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGMLESALDMFND 277

Query: 546 MVGRGCCPDVGSFSPLIGALCEKG 617
           M   G   +  +F  LI  L  +G
Sbjct: 278 MKTDGINCNFVTFDTLIKGLFSRG 301



 Score = 63.9 bits (154), Expect = 7e-08
 Identities = 57/221 (25%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
 Frame = +3

Query: 27  KMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEE-SRGPAGQITPYNNIIYGLYKEN 203
           K  G+ P+ + + T+I G      + D +K+LDL+    + P+ +I  +N+I+  L KE+
Sbjct: 3   KSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLVTRYGKNPSLKI--FNSILDVLVKED 60

Query: 204 RLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYVSL 383
            ++ A +F  K                                +M+G G       Y  L
Sbjct: 61  -IDLARKFYRK--------------------------------KMMGAGIQGDDYTYGIL 87

Query: 384 INGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGRGC 563
           + GLC    + E F+++  + S    P    +N ++   C  GKVG A  LM E+     
Sbjct: 88  MKGLCLTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEIKE--- 144

Query: 564 CPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFT 686
            P+  +F+ LI   C++ +F +A+  L K    G VPD  T
Sbjct: 145 -PNDVTFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVT 184


>ref|XP_004308566.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 612

 Score =  320 bits (821), Expect = 3e-85
 Identities = 151/256 (58%), Positives = 197/256 (76%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESR-GPAGQITPYNNI 179
            A+DL  +MK DGI+ NFATY+ +I G C  GR EDGLK+LDLM ES+ G  G+I+P+N++
Sbjct: 351  ALDLFNDMKTDGINWNFATYDVLIRGLCSGGRTEDGLKILDLMNESKDGCRGRISPFNSV 410

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            +YGLYKENRL++A+ FL  +  +FPRAVDRS RI+ FCE+G    AKK+Y+QMI E  +P
Sbjct: 411  LYGLYKENRLDEALEFLASLGKLFPRAVDRSLRILGFCEEGATENAKKLYDQMILERAVP 470

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
              L+Y  LI+  C++G VR+AFE+MNEM+ H YFP+ASTFN +I+GFCKQGKV SA KL+
Sbjct: 471  CVLIYDYLIHRFCQQGCVRQAFELMNEMIVHCYFPVASTFNVLINGFCKQGKVDSALKLL 530

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            EEMVGRGC PD+ S+S L+G LC+KGDFQ+A+  L +MVEKG+ PD FTW SLL+C S E
Sbjct: 531  EEMVGRGCLPDIDSYSHLVGVLCQKGDFQKALTLLFQMVEKGITPDHFTWNSLLVCTSLE 590

Query: 720  RIWLEGKNMLQVTSFL 767
             +WL  K+ML   + L
Sbjct: 591  TVWLNSKSMLYANNQL 606



 Score =  111 bits (277), Expect = 4e-22
 Identities = 63/226 (27%), Positives = 112/226 (49%), Gaps = 5/226 (2%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           ID+ RE     M   G+  +  T+  ++ G CL  R+ DG K+L  ++ SRG A     Y
Sbjct: 141 IDIAREFYRKKMMASGVKGDDYTFGILMKGLCLTSRIGDGFKLLQAIK-SRGVAPNTVVY 199

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +++ L +  ++ +A   + +ME   P  V  +  I  +C +    +A  + ++  G G
Sbjct: 200 NTLLHALCRNGKVGRARSLMNEMED--PNDVTFNILISGYCGEENLVQAVVMLDKCFGLG 257

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC +G V EA +V+  + S+        +N +I GFC+ GK     
Sbjct: 258 YVPDVVTITKVLELLCNDGRVMEAVKVLERVESNGGLVDVVAYNTLIKGFCQLGKAKLGL 317

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGV 668
           ++++EM  +GC PDV +++ LI   CE G   +A+     M   G+
Sbjct: 318 RILKEMERKGCLPDVDTYNVLISGFCESGMLDKALDLFNDMKTDGI 363



 Score = 94.0 bits (232), Expect = 6e-17
 Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 2/204 (0%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL+ +K  G+ PN   YNT++   C  G+V     +++ ME+          +N +I G 
Sbjct: 183 LLQAIKSRGVAPNTVVYNTLLHALCRNGKVGRARSLMNEMEDPND-----VTFNILISGY 237

Query: 192 YKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
             E  L +AV  L K   +   P  V  +  +   C DG   EA KV E++   G L   
Sbjct: 238 CGEENLVQAVVMLDKCFGLGYVPDVVTITKVLELLCNDGRVMEAVKVLERVESNGGLVDV 297

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +LI G C+ G  +    ++ EM      P   T+N +ISGFC+ G +  A  L  +
Sbjct: 298 VAYNTLIKGFCQLGKAKLGLRILKEMERKGCLPDVDTYNVLISGFCESGMLDKALDLFND 357

Query: 546 MVGRGCCPDVGSFSPLIGALCEKG 617
           M   G   +  ++  LI  LC  G
Sbjct: 358 MKTDGINWNFATYDVLIRGLCSGG 381



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
 Frame = +3

Query: 3   AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNII 182
           A  L+ EM+    DPN  T+N +I+G+C    +   + MLD      G    +     ++
Sbjct: 215 ARSLMNEME----DPNDVTFNILISGYCGEENLVQAVVMLDKCF-GLGYVPDVVTITKVL 269

Query: 183 YGLYKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDL 356
             L  + R+ +AV+ L ++ES       V  +  I  FC+ G      ++ ++M  +G L
Sbjct: 270 ELLCNDGRVMEAVKVLERVESNGGLVDVVAYNTLIKGFCQLGKAKLGLRILKEMERKGCL 329

Query: 357 PSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKL 536
           P    Y  LI+G C  G + +A ++ N+M +       +T++ +I G C  G+     K+
Sbjct: 330 PDVDTYNVLISGFCESGMLDKALDLFNDMKTDGINWNFATYDVLIRGLCSGGRTEDGLKI 389

Query: 537 MEEM--VGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKM 653
           ++ M     GC   +  F+ ++  L ++     A+  L  +
Sbjct: 390 LDLMNESKDGCRGRISPFNSVLYGLYKENRLDEALEFLASL 430


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  307 bits (786), Expect = 4e-81
 Identities = 147/256 (57%), Positives = 194/256 (75%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            A+D+  +MK DGI  NF TY+T+I G    GR+E+GLK+L+LMEES+G +G +I+PYN++
Sbjct: 368  ALDMFNDMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSV 427

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            +YGLYK+N  ++A+ FL KME +FPRAVDRS RI+ FCE G    AK V++QMI EG  P
Sbjct: 428  LYGLYKKNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTP 487

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            + LVY  L++G C+EG++REAFE+MNEMV H YF +AS FNA+I GFC QGK  SA KL+
Sbjct: 488  NILVYDCLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLL 547

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            ++MVGRGC PD G++SPLI ALC KG+FQ+A+    +M+EKG+ PD  TW SLL+ LS+E
Sbjct: 548  DDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKE 607

Query: 720  RIWLEGKNMLQVTSFL 767
             IWLE KN+  V   L
Sbjct: 608  IIWLENKNVFHVNKQL 623



 Score =  105 bits (261), Expect = 3e-20
 Identities = 58/228 (25%), Positives = 114/228 (50%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           ++M   G+  +  T+  ++ G CL  R+ DG ++L +M+ SRG       YN +++ L K
Sbjct: 167 KQMMGSGVQGDDYTFAILMKGLCLTNRIGDGFRLLQVMK-SRGVKPNAVVYNTLLHALCK 225

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   + ++E   P  V  +  I ++C++    +A  + E+    G +P  +   
Sbjct: 226 NGKVGRARSLMDEIEE--PNDVTFNVLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMT 283

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC  G V EA E++  +           +N ++ GFC+ GK+  A + ++EM  +
Sbjct: 284 KVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYNTLLRGFCRLGKIKVAHRFLKEMERK 343

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           GC P+V +++ LI   C+ G F  A+     M   G+  +  T+ +L+
Sbjct: 344 GCLPNVETYNILISGFCDSGMFDMALDMFNDMKTDGISWNFDTYDTLI 391



 Score = 91.3 bits (225), Expect = 4e-16
 Identities = 69/250 (27%), Positives = 109/250 (43%), Gaps = 4/250 (1%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL+ MK  G+ PN   YNT++   C  G+V     ++D +EE          +N +I   
Sbjct: 200 LLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEEPND-----VTFNVLIAAY 254

Query: 192 YKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
            KE  L +A+  L K  S+   P  V  +  +   C  G   EA ++ E++  +G L   
Sbjct: 255 CKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDV 314

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +L+ G CR G ++ A   + EM      P   T+N +ISGFC  G    A  +  +
Sbjct: 315 VAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFND 374

Query: 546 MVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEK--GVVPDCFTWKSLLLCLSQE 719
           M   G   +  ++  LI  L   G  +  +  L  M E   G       + S+L  L ++
Sbjct: 375 MKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYKK 434

Query: 720 RIWLEGKNML 749
            +W E    L
Sbjct: 435 NMWDEALEFL 444



 Score = 73.9 bits (180), Expect = 7e-11
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 2/235 (0%)
 Frame = +3

Query: 54  ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLNKAVRFLT 233
           +TY  +I   C   R +   ++LD M  + G       +  +I GL +   +   ++ L 
Sbjct: 73  STYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLD 132

Query: 234 KMESVFPRAVDRSFRIISFCEDGVNAEAKKVY--EQMIGEGDLPSALVYVSLINGLCREG 407
            +         + F  I      V+ +  + +  +QM+G G       +  L+ GLC   
Sbjct: 133 LISKFGKNPSLKIFNSILDVLVKVDIDVAREFYRKQMMGSGVQGDDYTFAILMKGLCLTN 192

Query: 408 DVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGRGCCPDVGSFS 587
            + + F ++  M S    P A  +N ++   CK GKVG A  LM+E+      P+  +F+
Sbjct: 193 RIGDGFRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEIEE----PNDVTFN 248

Query: 588 PLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQERIWLEGKNMLQ 752
            LI A C++ +  +A+  L K    G VPD  T   ++  L       E   ML+
Sbjct: 249 VLIAAYCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLE 303


>ref|XP_007219485.1| hypothetical protein PRUPE_ppa022097mg, partial [Prunus persica]
           gi|462415947|gb|EMJ20684.1| hypothetical protein
           PRUPE_ppa022097mg, partial [Prunus persica]
          Length = 511

 Score =  304 bits (779), Expect = 2e-80
 Identities = 141/240 (58%), Positives = 189/240 (78%), Gaps = 1/240 (0%)
 Frame = +3

Query: 3   AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPA-GQITPYNNI 179
           A+D+  +MK DGI+ NF TY+T+I   C  GR + G ++L+LM E +G + GQI+PYN++
Sbjct: 271 ALDMFNDMKTDGINWNFVTYDTLIRYLCSGGRTKKGFEILELMNERKGGSLGQISPYNSV 330

Query: 180 IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
           +YGLYKE+RL++A+ FLT M  +FPRAVDRS RI+ FCE+G    AK+VY QM+ E  +P
Sbjct: 331 LYGLYKEHRLDEALEFLTNMGKLFPRAVDRSLRILGFCEEGDTENAKRVYNQMLMERGVP 390

Query: 360 SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
           S  +Y  LI+  C+EG +REAFE++NEM++H YFP+A TFN++ISGFC+QGKVGSA KL+
Sbjct: 391 SVFIYDCLIHRYCQEGCIREAFELLNEMIAHGYFPLALTFNSLISGFCEQGKVGSALKLL 450

Query: 540 EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
           E+MVGRGC PD  S+SPL+ ALC  GDFQ+A+  +L+MVEKGV+PD FTW SLL+CLSQE
Sbjct: 451 EDMVGRGCSPDARSYSPLVAALCHMGDFQKALRLVLQMVEKGVIPDYFTWNSLLICLSQE 510



 Score =  108 bits (270), Expect = 2e-21
 Identities = 65/237 (27%), Positives = 116/237 (48%), Gaps = 5/237 (2%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           ID+ RE     M   G+  +  T+  ++ G CL  R+ DG K+L  M+ SRG       Y
Sbjct: 61  IDIAREFYRKKMMESGVQGDDYTFGILMKGLCLTNRIGDGFKLLQAMK-SRGITPNTVVY 119

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +++ L K  ++ +A   + +ME+  P  V  +  I  +C +    +A  + E+  G G
Sbjct: 120 NTLLHALCKNKKVGRARSLMNEMEA--PNDVTFNVLISGYCGEENLVQALVLLEKCFGLG 177

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC +G V EA +V+  + +         +N +I GFC+ GK     
Sbjct: 178 FVPDIVTVTKVLEILCSDGRVMEAVKVIGRVENKGGLVDVVAYNTLIKGFCRLGKAKLGL 237

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           ++++EM  +GC P+V +++ LI   CE G    A+     M   G+  +  T+ +L+
Sbjct: 238 RIVKEMERKGCLPNVDTYNVLISGFCESGMLDMALDMFNDMKTDGINWNFVTYDTLI 294



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 4/240 (1%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL+ MK  GI PN   YNT++   C   +V     +++ ME     A     +N +I G 
Sbjct: 103 LLQAMKSRGITPNTVVYNTLLHALCKNKKVGRARSLMNEME-----APNDVTFNVLISGY 157

Query: 192 YKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
             E  L +A+  L K   +   P  V  +  +   C DG   EA KV  ++  +G L   
Sbjct: 158 CGEENLVQALVLLEKCFGLGFVPDIVTVTKVLEILCSDGRVMEAVKVIGRVENKGGLVDV 217

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +LI G CR G  +    ++ EM      P   T+N +ISGFC+ G +  A  +  +
Sbjct: 218 VAYNTLIKGFCRLGKAKLGLRIVKEMERKGCLPNVDTYNVLISGFCESGMLDMALDMFND 277

Query: 546 MVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEK--GVVPDCFTWKSLLLCLSQE 719
           M   G   +  ++  LI  LC  G  ++    L  M E+  G +     + S+L  L +E
Sbjct: 278 MKTDGINWNFVTYDTLIRYLCSGGRTKKGFEILELMNERKGGSLGQISPYNSVLYGLYKE 337


>ref|XP_004247300.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Solanum lycopersicum]
          Length = 628

 Score =  290 bits (741), Expect = 6e-76
 Identities = 141/263 (53%), Positives = 189/263 (71%), Gaps = 2/263 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            A+++L EMK  GI+ NF TY T+I G C  GRVE+GLK+L++M++ +G +   I+PYNN+
Sbjct: 366  ALEMLNEMKRVGINWNFVTYGTLIHGLCSGGRVENGLKILEVMKDDKGVSTVHISPYNNV 425

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYG YKENRL +A+ FL KME++FPRAVDRS RI+ FCE+G   EA+KVY+QM+ EG +P
Sbjct: 426  IYGFYKENRLEEALVFLWKMENLFPRAVDRSVRILGFCENGNIDEARKVYDQMVKEGVMP 485

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            SALVY +L++G C +  ++ AF++MNEM+   Y P+A TFN +I   CKQGKVG ASKLM
Sbjct: 486  SALVYANLVSGYCSKECIKGAFDLMNEMIERGYLPVAYTFNDVIILLCKQGKVGKASKLM 545

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E + GRGC  D GS+ P I   C +GDF +A    L+MVEK +VPDC +W  LL+CL Q+
Sbjct: 546  ENIKGRGCLLDSGSYGPFIDVFCSRGDFHKAYMFFLQMVEKSIVPDCHSWNMLLVCLCQQ 605

Query: 720  RIWLEGKN-MLQVTSFLCRICET 785
              W+EG N    +TS L  I +T
Sbjct: 606  TTWIEGNNKTCHLTSQLQAIIQT 628



 Score =  108 bits (269), Expect = 3e-21
 Identities = 63/227 (27%), Positives = 113/227 (49%)
 Frame = +3

Query: 21  EMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKE 200
           +M  +GI  +  TY  ++ G CL  R+ DG K+L +M+   G       YN +I+ L K 
Sbjct: 166 KMMGNGIQGDHYTYGILMKGLCLTNRIGDGFKLLQVMKTC-GITPNTVIYNTLIHALCKN 224

Query: 201 NRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYVS 380
            ++ +A   +  +  V P  V  +  I ++C +G   +A  + E+   +G +P  +    
Sbjct: 225 GKVGRARSLMRDL--VEPSDVTFNILISAYCGEGSLVQALVMLEKSFSKGYIPDVITVTK 282

Query: 381 LINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGRG 560
           ++  LC  G V EA E++  +           +N +I+GFC+ GKV    +L++EM  +G
Sbjct: 283 VVGLLCNNGRVSEAVELLERVEERGGIVDVVAYNTLINGFCRLGKVKVGCRLLKEMELKG 342

Query: 561 CCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           C P+  +++ LI  LCE      A+  L +M   G+  +  T+ +L+
Sbjct: 343 CMPNADTYNGLISGLCESKMLDLALEMLNEMKRVGINWNFVTYGTLI 389



 Score = 87.4 bits (215), Expect = 6e-15
 Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKML-DLMEESRGPAGQITPYNNIIYG 188
           LL+ MK  GI PN   YNT+I   C  G+V     ++ DL+E S         +N +I  
Sbjct: 198 LLQVMKTCGITPNTVIYNTLIHALCKNGKVGRARSLMRDLVEPSD------VTFNILISA 251

Query: 189 LYKENRLNKAVRFLTKMES--VFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPS 362
              E  L +A+  L K  S    P  +  +  +   C +G  +EA ++ E++   G +  
Sbjct: 252 YCGEGSLVQALVMLEKSFSKGYIPDVITVTKVVGLLCNNGRVSEAVELLERVEERGGIVD 311

Query: 363 ALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLME 542
            + Y +LING CR G V+    ++ EM      P A T+N +ISG C+   +  A +++ 
Sbjct: 312 VVAYNTLINGFCRLGKVKVGCRLLKEMELKGCMPNADTYNGLISGLCESKMLDLALEMLN 371

Query: 543 EMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMV-EKGV 668
           EM   G   +  ++  LI  LC  G  +  +  L  M  +KGV
Sbjct: 372 EMKRVGINWNFVTYGTLIHGLCSGGRVENGLKILEVMKDDKGV 414


>ref|XP_006350309.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Solanum tuberosum]
          Length = 622

 Score =  287 bits (734), Expect = 4e-75
 Identities = 140/263 (53%), Positives = 189/263 (71%), Gaps = 2/263 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRG-PAGQITPYNNI 179
            A+++  EMK  GI+ NF TY+T+I G C  GRVE+GLK+L++M++ +G  A  I+PYN +
Sbjct: 360  ALEMFNEMKRVGINWNFVTYDTLIHGLCSGGRVENGLKILEVMKDDKGVSAFHISPYNGV 419

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYG Y EN L +A+ FL KME++FPRAVDRS RII FCE+G   EA++VY+QM+ EG +P
Sbjct: 420  IYGFYNENCLEEALAFLRKMENLFPRAVDRSVRIIGFCENGNIGEARRVYDQMVEEGVMP 479

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            SALVY +L++G C +G ++ AFE+MNEM+   Y P+AST N +I   CKQGKVG ASKLM
Sbjct: 480  SALVYANLVSGYCSKGCIKGAFELMNEMIGRGYLPVASTLNDVIILLCKQGKVGKASKLM 539

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E++ GRGC  D GS+ P I   C +GDF +A    L+MVEKG+VPD   W +LL+CL Q+
Sbjct: 540  EDIKGRGCLLDSGSYGPFIDVFCSRGDFHKAYMFFLQMVEKGIVPDYHLWNTLLVCLCQQ 599

Query: 720  RIWLEGKN-MLQVTSFLCRICET 785
              W+EG N   ++TS L  I +T
Sbjct: 600  TSWIEGNNKTCRLTSQLQAIIQT 622



 Score =  109 bits (272), Expect = 1e-21
 Identities = 66/237 (27%), Positives = 118/237 (49%), Gaps = 5/237 (2%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           ID+ RE     M  +GI  +  TY  ++ G CL  R+ DG K+L +M+ +RG       Y
Sbjct: 150 IDIAREFYRIKMMGNGIHGDDYTYGILMKGLCLTNRIGDGFKLLQVMK-TRGITPNTVIY 208

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +I+ L K  ++ +A   +  +  V P  V  +  I ++C +G   +A  + E+   +G
Sbjct: 209 NTLIHALCKNGKVGRARSLMRDL--VEPSDVTFNILISAYCGEGSLVQALVMLEKSFNKG 266

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC  G V EA E++  +           +N +I+GFC+ GKV    
Sbjct: 267 YIPDVITVTKVVGLLCNNGRVSEAVELLERVEERGGIVDVVAYNTLINGFCRLGKVKVGC 326

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           +L++EM  +GC P+  +++ LI  LC+      A+    +M   G+  +  T+ +L+
Sbjct: 327 RLLKEMELKGCMPNADTYNGLISGLCDSKMLDLALEMFNEMKRVGINWNFVTYDTLI 383



 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 38/256 (14%)
 Frame = +3

Query: 48  NFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLNKAVRF 227
           N +TY  +I   C   R +    +LD M  S G       +  I+ GL +   + + ++ 
Sbjct: 63  NQSTYRALIRMLCNFRRFDCVHHLLDEMPSSIGSTPDEDIFVTIVRGLGRTGMIKQVIK- 121

Query: 228 LTKMESVFPRA-------------------VDRSFRIISFCEDGVN-------------- 308
           + ++ S F +                    + R F  I    +G++              
Sbjct: 122 IPELVSKFEKKPTLKLYNSILDVLVKEDIDIAREFYRIKMMGNGIHGDDYTYGILMKGLC 181

Query: 309 -----AEAKKVYEQMIGEGDLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIAS 473
                 +  K+ + M   G  P+ ++Y +LI+ LC+ G V  A  +M ++V     P   
Sbjct: 182 LTNRIGDGFKLLQVMKTRGITPNTVIYNTLIHALCKNGKVGRARSLMRDLVE----PSDV 237

Query: 474 TFNAIISGFCKQGKVGSASKLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKM 653
           TFN +IS +C +G +  A  ++E+   +G  PDV + + ++G LC  G    AV  L ++
Sbjct: 238 TFNILISAYCGEGSLVQALVMLEKSFNKGYIPDVITVTKVVGLLCNNGRVSEAVELLERV 297

Query: 654 VEKGVVPDCFTWKSLL 701
            E+G + D   + +L+
Sbjct: 298 EERGGIVDVVAYNTLI 313


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like isoform X1 [Glycine max]
          Length = 618

 Score =  284 bits (727), Expect = 2e-74
 Identities = 137/252 (54%), Positives = 187/252 (74%), Gaps = 1/252 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESR-GPAGQITPYNNI 179
            A+DL  +MK DGI  NF T++T+I G C   R+EDG  +L+LMEES+ G  G I+PYN+I
Sbjct: 365  ALDLFNDMKTDGIKWNFVTFDTLIRGLCSEERIEDGFSILELMEESKEGSRGHISPYNSI 424

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYGL K+N  +++  FLTKM ++FPRAVDRS  I+  C+ G   +AK+VY+QMI EG +P
Sbjct: 425  IYGLLKKNGFDESAEFLTKMGNLFPRAVDRSLMILEHCKKGAIEDAKRVYDQMIDEGGIP 484

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S LVY  L++G  ++G+VREA E+MNEM+++N FPI STFNA+I+GFC+QGKV SA KL+
Sbjct: 485  SILVYNCLVHGFSKQGNVREAVELMNEMIANNCFPIPSTFNAVITGFCRQGKVESALKLV 544

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E++  RGC P+  ++SPLI  LC  GD Q+A+   ++MV+KG++PD F W SLLL LSQE
Sbjct: 545  EDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGILPDLFIWNSLLLSLSQE 604

Query: 720  RIWLEGKNMLQV 755
            R +   KNML +
Sbjct: 605  RHF--SKNMLNI 614



 Score =  110 bits (274), Expect = 8e-22
 Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 7/247 (2%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           ID+ RE     M   G++ +  T+  ++ G CL  R+ +G K+L L++ SRG A     Y
Sbjct: 155 IDMAREFYRKSMMASGVEGDDYTFGILMKGLCLTNRIGEGFKLLQLIK-SRGVAPNTVVY 213

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +++ L +  ++ +A   + +ME   P  V  +  I  +C++G + +A  + E+    G
Sbjct: 214 NTLLHALCRNGKVGRARNLMNEMED--PNDVTFNILISGYCKEGNSVQALVLLEKSFSMG 271

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC  G   EA EV+  + S         +N +I GFC  GKV    
Sbjct: 272 FVPDVVSVTKVLEILCNAGRTMEAAEVLERVESMGGLLDVVAYNTLIKGFCGAGKVKVGL 331

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL--L 704
             +++M  +GC P+V +++ LI    E G    A+     M   G+  +  T+ +L+  L
Sbjct: 332 HFLKQMENKGCLPNVDTYNVLISGFSESGMLDLALDLFNDMKTDGIKWNFVTFDTLIRGL 391

Query: 705 CLSQERI 725
           C S+ERI
Sbjct: 392 C-SEERI 397



 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 71/261 (27%), Positives = 109/261 (41%), Gaps = 42/261 (16%)
 Frame = +3

Query: 45  PNF----ATYNTMIAGFCLRGRVEDGLKMLDLMEESRG-PAG------------------ 155
           PNF    +TY  +I   C   R +   ++LD M  S G P G                  
Sbjct: 63  PNFVHSQSTYRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTR 122

Query: 156 ----------------QITPYNNIIYGLYKENRLNKAVRFLTK-MESVFPRAVDRSFRII 284
                            +  +N+I+  L KE+ ++ A  F  K M +      D +F I+
Sbjct: 123 TVIKVLDLVYKFHGSPSLKIFNSILDVLVKED-IDMAREFYRKSMMASGVEGDDYTFGIL 181

Query: 285 --SFCEDGVNAEAKKVYEQMIGEGDLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNY 458
               C      E  K+ + +   G  P+ +VY +L++ LCR G V  A  +MNEM     
Sbjct: 182 MKGLCLTNRIGEGFKLLQLIKSRGVAPNTVVYNTLLHALCRNGKVGRARNLMNEMED--- 238

Query: 459 FPIASTFNAIISGFCKQGKVGSASKLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVG 638
            P   TFN +ISG+CK+G    A  L+E+    G  PDV S + ++  LC  G    A  
Sbjct: 239 -PNDVTFNILISGYCKEGNSVQALVLLEKSFSMGFVPDVVSVTKVLEILCNAGRTMEAAE 297

Query: 639 TLLKMVEKGVVPDCFTWKSLL 701
            L ++   G + D   + +L+
Sbjct: 298 VLERVESMGGLLDVVAYNTLI 318


>ref|XP_007158017.1| hypothetical protein PHAVU_002G117300g [Phaseolus vulgaris]
            gi|561031432|gb|ESW30011.1| hypothetical protein
            PHAVU_002G117300g [Phaseolus vulgaris]
          Length = 626

 Score =  283 bits (723), Expect = 7e-74
 Identities = 136/256 (53%), Positives = 187/256 (73%), Gaps = 1/256 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESR-GPAGQITPYNNI 179
            A+DL  +MK+DGI  NF T++++I G CL GR+EDG  +L+LMEES+ G  G I+PYN+I
Sbjct: 373  ALDLFNDMKIDGIQWNFVTFDSLIRGLCLEGRIEDGFSILELMEESKEGSRGHISPYNSI 432

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYGL+K+NR ++A  FLTKM ++FPRAVDRS +I+  C+ G   +AK+VY QM  EG +P
Sbjct: 433  IYGLFKQNRFDEAAEFLTKMGNLFPRAVDRSLKILEHCKKGSIEDAKRVYNQMTDEGGIP 492

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S LVY  L++G  ++G VREA E+MNEM+++N FPI ST NA+I+GFC+QG+V +A KL+
Sbjct: 493  SILVYDCLVHGFSQQGSVREAVELMNEMIANNCFPIPSTLNAVITGFCRQGRVENALKLV 552

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+M+ RGC P+  ++ PLI  LC KGD Q+A+    +MV+KG++P+ F W SLLL L QE
Sbjct: 553  EDMIARGCAPNTETYCPLIDVLCRKGDLQKAMQVFREMVDKGILPNLFIWNSLLLSLRQE 612

Query: 720  RIWLEGKNMLQVTSFL 767
            R     KN L V   L
Sbjct: 613  R--RINKNTLDVYDIL 626



 Score =  109 bits (272), Expect = 1e-21
 Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 7/242 (2%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           ID+ RE     M   G++ +  T+  ++ G CL  R+ +G K+L L++ SRG       Y
Sbjct: 163 IDMAREFYRKSMMASGVEGDDYTFGILMKGMCLTNRIGEGFKLLQLIK-SRGVTPNTVVY 221

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +++ L +  ++ +A   +++ME   P  V  +  I  +C++G + +   + E+    G
Sbjct: 222 NTLLHALCRNGKVGRARSLMSEMEE--PNDVTFNILISGYCKEGNSVQPLVLLEKSFSLG 279

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC  G   EA EV+  + S         +N +I GFC  GKV    
Sbjct: 280 FVPDTVSVTKVLEILCNAGRATEAAEVLERVESMGGSLDVVAYNTLIKGFCGVGKVKVGL 339

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL--L 704
             +++M  +GC P+V +F+ LI   CE G    A+     M   G+  +  T+ SL+  L
Sbjct: 340 HFLKQMESKGCLPNVDTFNALISGFCESGMLDLALDLFNDMKIDGIQWNFVTFDSLIRGL 399

Query: 705 CL 710
           CL
Sbjct: 400 CL 401



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 65/218 (29%), Positives = 96/218 (44%), Gaps = 2/218 (0%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL+ +K  G+ PN   YNT++   C  G+V     ++  MEE          +N +I G 
Sbjct: 205 LLQLIKSRGVTPNTVVYNTLLHALCRNGKVGRARSLMSEMEEPND-----VTFNILISGY 259

Query: 192 YKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
            KE    + +  L K  S+   P  V  +  +   C  G   EA +V E++   G     
Sbjct: 260 CKEGNSVQPLVLLEKSFSLGFVPDTVSVTKVLEILCNAGRATEAAEVLERVESMGGSLDV 319

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +LI G C  G V+     + +M S    P   TFNA+ISGFC+ G +  A  L  +
Sbjct: 320 VAYNTLIKGFCGVGKVKVGLHFLKQMESKGCLPNVDTFNALISGFCESGMLDLALDLFND 379

Query: 546 MVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVE 659
           M   G   +  +F  LI  LC +G  +     L  M E
Sbjct: 380 MKIDGIQWNFVTFDSLIRGLCLEGRIEDGFSILELMEE 417



 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 69/234 (29%), Positives = 109/234 (46%), Gaps = 4/234 (1%)
 Frame = +3

Query: 12  LLREMKMD-GIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYG 188
           LL EM    G  PN A + T+I G      +   +K+LDL  +  G +  +  +N+I+  
Sbjct: 99  LLDEMPQSLGAPPNDAIFVTIIRGLGRARMIRTVIKVLDLAYKFHG-SPSLKIFNSILDV 157

Query: 189 LYKENRLNKAVRFLTK-MESVFPRAVDRSFRII--SFCEDGVNAEAKKVYEQMIGEGDLP 359
           L KE+ ++ A  F  K M +      D +F I+    C      E  K+ + +   G  P
Sbjct: 158 LVKED-IDMAREFYRKSMMASGVEGDDYTFGILMKGMCLTNRIGEGFKLLQLIKSRGVTP 216

Query: 360 SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
           + +VY +L++ LCR G V  A  +M+EM      P   TFN +ISG+CK+G       L+
Sbjct: 217 NTVVYNTLLHALCRNGKVGRARSLMSEMEE----PNDVTFNILISGYCKEGNSVQPLVLL 272

Query: 540 EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           E+    G  PD  S + ++  LC  G    A   L ++   G   D   + +L+
Sbjct: 273 EKSFSLGFVPDTVSVTKVLEILCNAGRATEAAEVLERVESMGGSLDVVAYNTLI 326


>ref|XP_003612374.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355513709|gb|AES95332.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  281 bits (719), Expect = 2e-73
 Identities = 134/238 (56%), Positives = 179/238 (75%), Gaps = 1/238 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESR-GPAGQITPYNNI 179
            A+DL  +MK DGI+ NF T++TMI G C  GR+EDG  +L+LMEE++ G  G I+PYN+I
Sbjct: 367  ALDLFNDMKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEETKEGSKGHISPYNSI 426

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYGL+K+NR ++A  FL KM  +FPRAVDRS  II  C++G   +AK +Y++MI EG +P
Sbjct: 427  IYGLFKQNRFDEASEFLAKMGKLFPRAVDRSMTIIQKCKEGAIEDAKNIYDKMIDEGGIP 486

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S LVY SL++G  + G +REA E++NEM+S+N FPIASTFNAII+ FC+QGK+ SA K M
Sbjct: 487  SILVYNSLVHGFSQHGSIREAVELINEMISNNCFPIASTFNAIITEFCEQGKIESALKFM 546

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLS 713
            E++  RGC P+  ++SPLI  LC KGD Q+A+   L+MVEKG++PD   WKSLLL LS
Sbjct: 547  EDITARGCVPNTETYSPLIDVLCRKGDIQKALQVFLEMVEKGILPDQCIWKSLLLSLS 604



 Score = 89.7 bits (221), Expect = 1e-15
 Identities = 65/218 (29%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL+ +K +G+ PN   YNT++   C  G+V    +   LM E   P  ++T +N +I   
Sbjct: 199 LLQLIKNNGVTPNTVIYNTLLHALCRNGKVG---RARSLMNEMVDP-NEVT-FNILISSY 253

Query: 192 YKENRLNKAVRFLTKME--SVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
           YKE  L +A+  L K    S+ P  V  +  +   C  G   EA +V E++   G    A
Sbjct: 254 YKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDA 313

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +LI G C  G V+     + +M +  Y P   T+N +I GFC+   +  A  L  +
Sbjct: 314 VAYNTLIKGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFND 373

Query: 546 MVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVE 659
           M   G   +  +F  +I  LC +G  +     L  M E
Sbjct: 374 MKTDGINRNFVTFDTMIRGLCSEGRIEDGFSILELMEE 411



 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 63/255 (24%), Positives = 119/255 (46%), Gaps = 5/255 (1%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           ID+ RE     M   G+  +  T+  ++ G CL  R+ +G K+L L++ + G       Y
Sbjct: 157 IDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTNRIGEGFKLLQLIKNN-GVTPNTVIY 215

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +++ L +  ++ +A   + +M  V P  V  +  I S+ ++    +A  + E+     
Sbjct: 216 NTLLHALCRNGKVGRARSLMNEM--VDPNEVTFNILISSYYKEENLVQALVLLEKCFALS 273

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC  G V EA EV+  + S      A  +N +I GFC  GKV    
Sbjct: 274 LVPDVVTVTKVVEILCNAGRVTEAAEVLERVESLGGSLDAVAYNTLIKGFCGVGKVKVGL 333

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCL 710
             +++M  +G  P+V +++ LI   CE      A+     M   G+  +  T+ +++  L
Sbjct: 334 HFLKQMENKGYLPNVDTYNILIYGFCESRMLDLALDLFNDMKTDGINRNFVTFDTMIRGL 393

Query: 711 SQERIWLEGKNMLQV 755
             E    +G ++L++
Sbjct: 394 CSEGRIEDGFSILEL 408



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 37/253 (14%)
 Frame = +3

Query: 54  ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLNKAVRFL- 230
           +TY T+I   C+  R +   ++LD M  S G       +  I+ GL +     + +  L 
Sbjct: 72  STYRTLIHKLCIFRRFDTVKQLLDEMPTSIGANPGEDIFITIVRGLSRAGMTRRVITVLD 131

Query: 231 -------TKMESVFPRAVD----------RSFRIISFCEDGVN----------------- 308
                  T    +F   +D          R F   S  E GV                  
Sbjct: 132 LAYKFHGTPSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVRGDDYTFGILMKGLCLTN 191

Query: 309 --AEAKKVYEQMIGEGDLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFN 482
              E  K+ + +   G  P+ ++Y +L++ LCR G V  A  +MNEMV     P   TFN
Sbjct: 192 RIGEGFKLLQLIKNNGVTPNTVIYNTLLHALCRNGKVGRARSLMNEMVD----PNEVTFN 247

Query: 483 AIISGFCKQGKVGSASKLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEK 662
            +IS + K+  +  A  L+E+       PDV + + ++  LC  G    A   L ++   
Sbjct: 248 ILISSYYKEENLVQALVLLEKCFALSLVPDVVTVTKVVEILCNAGRVTEAAEVLERVESL 307

Query: 663 GVVPDCFTWKSLL 701
           G   D   + +L+
Sbjct: 308 GGSLDAVAYNTLI 320


>gb|EXC65018.1| hypothetical protein L484_000081 [Morus notabilis]
          Length = 363

 Score =  280 bits (717), Expect = 4e-73
 Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 1/262 (0%)
 Frame = +3

Query: 3   AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
           A+ L  +MK DG+  N  TY+T+I G C  GR +DG  +L LMEES+G  G +I+PYN+I
Sbjct: 103 AMGLFNDMKTDGVQSNLVTYDTLIRGLCYGGRTKDGFLILQLMEESKGGCGGRISPYNSI 162

Query: 180 IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
           +YGLYKENR+++ + FLT M  +FPRAVDRS +I++ C +G   +AK +Y+Q+I EG  P
Sbjct: 163 LYGLYKENRVDEGLEFLTNMGRLFPRAVDRSLKILNLCSEGKVEDAKSIYDQLISEGGAP 222

Query: 360 SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
             +VY  LI G C EG++REA  +MNEM++  Y PIASTFN++ISGFC +G+   A +L+
Sbjct: 223 CVIVYSHLICGFCEEGNLREALALMNEMIARGYSPIASTFNSLISGFCSRGR-SDAIRLV 281

Query: 540 EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
           E+MVGRGC PD GS+SPL+ ALC +GDFQ+A   + +MVEKG++PD   W SL+LCL + 
Sbjct: 282 EDMVGRGCTPDAGSYSPLVHALCREGDFQKASMMVSQMVEKGIIPDYCAWSSLILCLCKG 341

Query: 720 RIWLEGKNMLQVTSFLCRICET 785
           +  LE  +M +    L  I ET
Sbjct: 342 KECLENNHMFRRNELLKLIIET 363



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 33/118 (27%), Positives = 60/118 (50%)
 Frame = +3

Query: 348 GDLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSA 527
           G +P  +    ++  LC  G V EA E++  + S         +N ++ GFC+ GKV   
Sbjct: 9   GFVPDIVTVTKVLQILCSSGRVSEAVEILERVESKGCLVDVVAYNTLLKGFCESGKVKVG 68

Query: 528 SKLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
            ++++EM  +GC P++ +++ LI   C+ G    A+G    M   GV  +  T+ +L+
Sbjct: 69  RRILKEMERKGCLPNLDTYNVLIHGFCKSGLLDSAMGLFNDMKTDGVQSNLVTYDTLI 126



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 34/109 (31%), Positives = 54/109 (49%)
 Frame = +3

Query: 291 CEDGVNAEAKKVYEQMIGEGDLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIA 470
           C  G  +EA ++ E++  +G L   + Y +L+ G C  G V+    ++ EM      P  
Sbjct: 25  CSSGRVSEAVEILERVESKGCLVDVVAYNTLLKGFCESGKVKVGRRILKEMERKGCLPNL 84

Query: 471 STFNAIISGFCKQGKVGSASKLMEEMVGRGCCPDVGSFSPLIGALCEKG 617
            T+N +I GFCK G + SA  L  +M   G   ++ ++  LI  LC  G
Sbjct: 85  DTYNVLIHGFCKSGLLDSAMGLFNDMKTDGVQSNLVTYDTLIRGLCYGG 133


>gb|EXC26653.1| hypothetical protein L484_000875 [Morus notabilis]
          Length = 626

 Score =  280 bits (717), Expect = 4e-73
 Identities = 134/262 (51%), Positives = 185/262 (70%), Gaps = 1/262 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            A+ L  +MK DG+  N  TY+T+I G C  GR +DG  +L LMEES+G  G +I+PYN+I
Sbjct: 366  AMGLFNDMKTDGVQSNLVTYDTLIRGLCYGGRTKDGFLILQLMEESKGGCGGRISPYNSI 425

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            +YGLYKENR+++ + FLT M  +FPRAVDRS +I++ C +G   +AK +Y+Q+I EG  P
Sbjct: 426  LYGLYKENRVDEGLEFLTNMGRLFPRAVDRSLKILNLCSEGKVEDAKSIYDQLISEGGAP 485

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
              +VY  LI G C EG++REA  +MNEM++  Y PIASTFN++ISGFC +G+   A +L+
Sbjct: 486  CVIVYSHLICGFCEEGNLREALALMNEMIARGYSPIASTFNSLISGFCSRGR-SDAIRLV 544

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+MVGRGC PD GS+SPL+ ALC +GDFQ+A   + +MVEKG++PD   W SL+LCL + 
Sbjct: 545  EDMVGRGCTPDAGSYSPLVHALCREGDFQKASMMVSQMVEKGIIPDYCAWSSLILCLCKG 604

Query: 720  RIWLEGKNMLQVTSFLCRICET 785
            +  LE  +M +    L  I ET
Sbjct: 605  KECLENNHMFRRNELLKLIIET 626



 Score =  103 bits (257), Expect = 8e-20
 Identities = 55/228 (24%), Positives = 113/228 (49%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           R+M   G++ +  T+  ++ G C   R+ D  K+L +++ SRG       YN +++ L +
Sbjct: 165 RKMMASGVEGDDYTFGILMKGLCSANRIADAFKLLQVIK-SRGVPPNAVVYNTLLHALCR 223

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   + +M+ +    V  +  I ++C +    +A  + ++    G +P  +   
Sbjct: 224 NGKVGRARSLMNEMDDLSD--VTFNVMIAAYCAEDNIVQALVMLDKCFSLGFVPDIVTVT 281

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC  G V EA E++  + S         +N ++ GFC+ GKV    ++++EM  +
Sbjct: 282 KVLQILCSSGRVSEAVEILERVESKGCLVDVVAYNTLLKGFCESGKVKVGRRILKEMERK 341

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
           GC P++ +++ LI   C+ G    A+G    M   GV  +  T+ +L+
Sbjct: 342 GCLPNLDTYNVLIHGFCKSGLLDSAMGLFNDMKTDGVQSNLVTYDTLI 389



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 58/207 (28%), Positives = 99/207 (47%), Gaps = 2/207 (0%)
 Frame = +3

Query: 3   AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNII 182
           A  LL+ +K  G+ PN   YNT++   C  G+V     +++ M++       +T +N +I
Sbjct: 195 AFKLLQVIKSRGVPPNAVVYNTLLHALCRNGKVGRARSLMNEMDD----LSDVT-FNVMI 249

Query: 183 YGLYKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDL 356
                E+ + +A+  L K  S+   P  V  +  +   C  G  +EA ++ E++  +G L
Sbjct: 250 AAYCAEDNIVQALVMLDKCFSLGFVPDIVTVTKVLQILCSSGRVSEAVEILERVESKGCL 309

Query: 357 PSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKL 536
              + Y +L+ G C  G V+    ++ EM      P   T+N +I GFCK G + SA  L
Sbjct: 310 VDVVAYNTLLKGFCESGKVKVGRRILKEMERKGCLPNLDTYNVLIHGFCKSGLLDSAMGL 369

Query: 537 MEEMVGRGCCPDVGSFSPLIGALCEKG 617
             +M   G   ++ ++  LI  LC  G
Sbjct: 370 FNDMKTDGVQSNLVTYDTLIRGLCYGG 396



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 60/231 (25%), Positives = 100/231 (43%), Gaps = 8/231 (3%)
 Frame = +3

Query: 45  PNF----ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLN 212
           PNF    +TY ++I   C+  R +   ++LD M  S G       +  +I GL +     
Sbjct: 64  PNFRHSHSTYCSLIHKLCIFRRFDAAHQLLDEMPTSLGSPPDDDTFVTLIRGLARARMTR 123

Query: 213 KAVRFLTKMESVFPRAVDRSFRIIS--FCEDGVNAEAKKVYEQMIGEGDLPSALVYVSLI 386
           + +  L        R   + F  I     ++ ++   +    +M+  G       +  L+
Sbjct: 124 RVLNVLDLAYKFHARPSLKIFNSILNVLVKENIDVAREFYRRKMMASGVEGDDYTFGILM 183

Query: 387 NGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGRGCC 566
            GLC    + +AF+++  + S    P A  +N ++   C+ GKVG A  LM EM      
Sbjct: 184 KGLCSANRIADAFKLLQVIKSRGVPPNAVVYNTLLHALCRNGKVGRARSLMNEMDDLS-- 241

Query: 567 PDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL--LCLS 713
            DV +F+ +I A C + +  +A+  L K    G VPD  T   +L  LC S
Sbjct: 242 -DV-TFNVMIAAYCAEDNIVQALVMLDKCFSLGFVPDIVTVTKVLQILCSS 290



 Score = 70.1 bits (170), Expect = 1e-09
 Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 5/222 (2%)
 Frame = +3

Query: 3   AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNII 182
           A  L+ EM     D +  T+N MIA +C    +   L MLD    S G    I     ++
Sbjct: 230 ARSLMNEMD----DLSDVTFNVMIAAYCAEDNIVQALVMLDKCF-SLGFVPDIVTVTKVL 284

Query: 183 YGLYKENRLNKAVRFLTKMES--VFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDL 356
             L    R+++AV  L ++ES       V  +  +  FCE G     +++ ++M  +G L
Sbjct: 285 QILCSSGRVSEAVEILERVESKGCLVDVVAYNTLLKGFCESGKVKVGRRILKEMERKGCL 344

Query: 357 PSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSA--- 527
           P+   Y  LI+G C+ G +  A  + N+M +        T++ +I G C  G+       
Sbjct: 345 PNLDTYNVLIHGFCKSGLLDSAMGLFNDMKTDGVQSNLVTYDTLIRGLCYGGRTKDGFLI 404

Query: 528 SKLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKM 653
            +LMEE  G GC   +  ++ ++  L ++      +  L  M
Sbjct: 405 LQLMEESKG-GCGGRISPYNSILYGLYKENRVDEGLEFLTNM 445


>ref|XP_006467094.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Citrus sinensis]
          Length = 618

 Score =  278 bits (710), Expect = 2e-72
 Identities = 132/246 (53%), Positives = 182/246 (73%), Gaps = 4/246 (1%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESR-GPAGQITPYNNI 179
            A+D+  +MK+DGI  NF TY+T+I G C  GR++DGLK+L LME+S+ G  G+I+PYN++
Sbjct: 364  ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 423

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            +YGLY+EN+ ++A+ +L +ME +FPRAVDRS +I+ FC DG   +AK+ ++QMI EG +P
Sbjct: 424  LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 483

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            + ++Y  LI+  C+E  VREA E+M EM  H Y PIASTFN ++SG C+QG VG+A KL+
Sbjct: 484  NVVIYDCLIHAYCQEERVREASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 543

Query: 540  EE---MVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCL 710
            EE    +GRG  P  G +SPLI ALCEKG FQ A   L++MV KG++PD  TW SLL+CL
Sbjct: 544  EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 603

Query: 711  SQERIW 728
            SQ+  W
Sbjct: 604  SQQTTW 609



 Score =  107 bits (267), Expect = 5e-21
 Identities = 68/246 (27%), Positives = 119/246 (48%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           ++M   G+  +  TY  ++ G CL  RV DG K+L +M+ SRG       YN +I+ L K
Sbjct: 163 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK-SRGVKPSSVIYNTLIHLLCK 221

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   ++ ME   P  V  S  I ++C++     A  + E+    G +P  +   
Sbjct: 222 NGKVGRARSLMSDMEE--PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 279

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC  G V +A E++  + S         +N +I GFC+ GKV    + ++EM  +
Sbjct: 280 KVLELLCSVGRVMDAVEILERVESKGGVIDIVAYNTLIKGFCRLGKVKGGCRFLKEMERK 339

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQERIWLEG 737
           GC P+  +++ LI + CE G    A+     M   G+  +  T+ +L+  L       +G
Sbjct: 340 GCLPNADTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 399

Query: 738 KNMLQV 755
             +LQ+
Sbjct: 400 LKILQL 405



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL  MK  G+ P+   YNT+I   C  G+V     ++  MEE          ++ +I   
Sbjct: 196 LLHVMKSRGVKPSSVIYNTLIHLLCKNGKVGRARSLMSDMEEPND-----VTFSILICAY 250

Query: 192 YKENRLNKAVRFLTKMES--VFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
            KE  L  A+  L K  S    P  V  +  +   C  G   +A ++ E++  +G +   
Sbjct: 251 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILERVESKGGVIDI 310

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +LI G CR G V+     + EM      P A T+N +IS +C+ G + SA  +  +
Sbjct: 311 VAYNTLIKGFCRLGKVKGGCRFLKEMERKGCLPNADTYNILISSYCETGVLDSALDVFND 370

Query: 546 MVGRGCCPDVGSFSPLIGALCEKG 617
           M   G   +  ++  LI  LC  G
Sbjct: 371 MKIDGISWNFVTYDTLIRGLCSGG 394



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 4/254 (1%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNII 182
            A+ LL +    G  P+  T   ++   C  GRV D +++L+ +E S+G    I  YN +I
Sbjct: 259  ALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILERVE-SKGGVIDIVAYNTLI 317

Query: 183  YGLYKENRLNKAVRFLTKME--SVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDL 356
             G  +  ++    RFL +ME     P A   +  I S+CE GV   A  V+  M  +G  
Sbjct: 318  KGFCRLGKVKGGCRFLKEMERKGCLPNADTYNILISSYCETGVLDSALDVFNDMKIDGIS 377

Query: 357  PSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIA--STFNAIISGFCKQGKVGSAS 530
             + + Y +LI GLC  G + +  +++  M           S +N+++ G  ++ +   A 
Sbjct: 378  WNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSVLYGLYRENQQDEAL 437

Query: 531  KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCL 710
            + +++M      P     S  I   C  G+ + A     +M+E+G VP+   +  L+   
Sbjct: 438  EYLKQM--EKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVPNVVIYDCLIHAY 495

Query: 711  SQERIWLEGKNMLQ 752
             QE    E   +++
Sbjct: 496  CQEERVREASELMK 509



 Score = 70.5 bits (171), Expect = 7e-10
 Identities = 66/228 (28%), Positives = 103/228 (45%), Gaps = 9/228 (3%)
 Frame = +3

Query: 45  PNF----ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLN 212
           PNF    +TY  +I   C   R +   ++LD M  S       + +  +I GL +   +N
Sbjct: 62  PNFTHSRSTYRALIHKLCTFRRFDTVKELLDEMPHSIQSPPDESIFITVIRGLGRARMIN 121

Query: 213 KAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAE----AKKVY-EQMIGEGDLPSALVYV 377
             V+  T + S F   +  S +I +   D +  E    A+  Y ++M+  G       Y 
Sbjct: 122 DVVK-ATDLVSRF--NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDYTYA 178

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            L+ GLC    V + F++++ M S    P +  +N +I   CK GKVG A  LM +M   
Sbjct: 179 ILMKGLCLTNRVGDGFKLLHVMKSRGVKPSSVIYNTLIHLLCKNGKVGRARSLMSDMEE- 237

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
              P+  +FS LI A C++ +   A+  L K    G VPD  T   +L
Sbjct: 238 ---PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 282


>ref|XP_006425269.1| hypothetical protein CICLE_v10026953mg [Citrus clementina]
            gi|557527259|gb|ESR38509.1| hypothetical protein
            CICLE_v10026953mg [Citrus clementina]
          Length = 621

 Score =  272 bits (695), Expect = 1e-70
 Identities = 130/246 (52%), Positives = 180/246 (73%), Gaps = 4/246 (1%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESR-GPAGQITPYNNI 179
            A+D+  +MK+DGI  NF TY+T+I G C  GR++DGLK+L LME+S+ G  G+I+PYN++
Sbjct: 364  ALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDGLKILQLMEDSKEGSKGRISPYNSV 423

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            +YGLY+EN+ ++A+ +L +ME +FPRAVDRS +I+ FC DG   +AK+ ++QMI EG +P
Sbjct: 424  LYGLYRENQQDEALEYLKQMEKLFPRAVDRSLKILGFCVDGNVEDAKRCFDQMIEEGGVP 483

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            + ++Y  LI+   +E  V EA E+M EM  H Y PIASTFN ++SG C+QG VG+A KL+
Sbjct: 484  NVVIYDCLIHAYSQEERVHEASELMKEMTGHGYLPIASTFNTVLSGLCRQGNVGTALKLV 543

Query: 540  EE---MVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCL 710
            EE    +GRG  P  G +SPLI ALCEKG FQ A   L++MV KG++PD  TW SLL+CL
Sbjct: 544  EEDMRGIGRGSLPGSGHYSPLIKALCEKGGFQSASMLLVQMVGKGILPDYLTWNSLLICL 603

Query: 711  SQERIW 728
            SQ+  W
Sbjct: 604  SQQTTW 609



 Score =  107 bits (266), Expect = 7e-21
 Identities = 68/246 (27%), Positives = 119/246 (48%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           ++M   G+  +  TY  ++ G CL  RV DG K+L +M+ SRG       YN +I+ L K
Sbjct: 163 KKMMASGVQGDDYTYAILMKGLCLTNRVGDGFKLLHVMK-SRGVKPSSVIYNTLIHLLCK 221

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   ++ ME   P  V  S  I ++C++     A  + E+    G +P  +   
Sbjct: 222 NGKVGRARSLMSDMEE--PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTIT 279

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC  G V +A E++  + S         +N +I GFC+ GKV    + ++EM  +
Sbjct: 280 KVLELLCSVGRVMDAVEILERVESKGGVIDIVAYNTLIKGFCRLGKVKVGGRFLKEMERK 339

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQERIWLEG 737
           GC P+  +++ LI + CE G    A+     M   G+  +  T+ +L+  L       +G
Sbjct: 340 GCLPNADTYNILISSYCETGVLDSALDVFNDMKIDGISWNFVTYDTLIRGLCSGGRIDDG 399

Query: 738 KNMLQV 755
             +LQ+
Sbjct: 400 LKILQL 405



 Score = 79.3 bits (194), Expect = 2e-12
 Identities = 58/204 (28%), Positives = 91/204 (44%), Gaps = 2/204 (0%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL  MK  G+ P+   YNT+I   C  G+V     ++  MEE          ++ +I   
Sbjct: 196 LLHVMKSRGVKPSSVIYNTLIHLLCKNGKVGRARSLMSDMEEPND-----VTFSILICAY 250

Query: 192 YKENRLNKAVRFLTKMES--VFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
            KE  L  A+  L K  S    P  V  +  +   C  G   +A ++ E++  +G +   
Sbjct: 251 CKEENLVNALVLLEKSFSFGFVPDVVTITKVLELLCSVGRVMDAVEILERVESKGGVIDI 310

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +LI G CR G V+     + EM      P A T+N +IS +C+ G + SA  +  +
Sbjct: 311 VAYNTLIKGFCRLGKVKVGGRFLKEMERKGCLPNADTYNILISSYCETGVLDSALDVFND 370

Query: 546 MVGRGCCPDVGSFSPLIGALCEKG 617
           M   G   +  ++  LI  LC  G
Sbjct: 371 MKIDGISWNFVTYDTLIRGLCSGG 394



 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 65/231 (28%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
 Frame = +3

Query: 24  MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKEN 203
           MK+     + +TY  +I   C   R +   ++LD M  S       + +  +I GL +  
Sbjct: 59  MKIPNFTHSRSTYRALIHKLCTFRRFDTVKELLDEMPHSIQSPPDESIFITVIRGLGRAR 118

Query: 204 RLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAE----AKKVY-EQMIGEGDLPSAL 368
            +N  V+  T + S F   +  S +I +   D +  E    A+  Y ++M+  G      
Sbjct: 119 MINDVVK-ATDLVSRF--NMTPSLKIFNSILDVLVKEDIDLARAFYRKKMMASGVQGDDY 175

Query: 369 VYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEM 548
            Y  L+ GLC    V + F++++ M S    P +  +N +I   CK GKVG A  LM +M
Sbjct: 176 TYAILMKGLCLTNRVGDGFKLLHVMKSRGVKPSSVIYNTLIHLLCKNGKVGRARSLMSDM 235

Query: 549 VGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLL 701
                 P+  +FS LI A C++ +   A+  L K    G VPD  T   +L
Sbjct: 236 EE----PNDVTFSILICAYCKEENLVNALVLLEKSFSFGFVPDVVTITKVL 282


>ref|XP_004512279.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
            mitochondrial-like [Cicer arietinum]
          Length = 623

 Score =  271 bits (693), Expect = 2e-70
 Identities = 130/257 (50%), Positives = 185/257 (71%), Gaps = 2/257 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESR-GPAGQITPYNNI 179
            A+DL  +MK DGI  NF T++ MI G C  GR+EDG  +L+LMEE++ G  G I PYN+I
Sbjct: 369  ALDLFNDMKTDGIKRNFVTFDAMIRGLCSEGRIEDGFSILELMEETKEGSRGHINPYNSI 428

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAE-AKKVYEQMIGEGDL 356
            IYGL+K+NR ++A  FLTKM  +FPRAVDRS  I+  C++G   E AK+VY++M+ EG +
Sbjct: 429  IYGLFKQNRFDEATEFLTKMGKLFPRAVDRSMTILQHCKEGSTIEEAKRVYDKMVEEGGI 488

Query: 357  PSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKL 536
            PS LVY  L++    +G +R+A E++NEM+++N FP+ASTFNAII+GFC++GK+ SA K 
Sbjct: 489  PSILVYNCLVHSFSEQGSIRDAIELINEMIANNCFPVASTFNAIITGFCREGKIESALKF 548

Query: 537  MEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQ 716
            ME++  RGC P+  ++S LI  LC KG+ Q+A+   L+MVEKG++P+ F WK+LLL LS 
Sbjct: 549  MEDITARGCVPNTETYSTLIDVLCRKGELQKALQIFLEMVEKGILPNHFIWKTLLLTLSL 608

Query: 717  ERIWLEGKNMLQVTSFL 767
            ++ +   KNM  +   L
Sbjct: 609  QKNF--SKNMSNIDYLL 623



 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 62/255 (24%), Positives = 119/255 (46%), Gaps = 5/255 (1%)
 Frame = +3

Query: 6   IDLLRE-----MKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPY 170
           ID+ RE     M   G+  +  T+  ++ G CL  R+ +G K+L L++ S G       Y
Sbjct: 159 IDMAREFYRKSMMESGVQGDDYTFGILMKGLCLTNRIGEGFKLLQLIK-SNGVTPNTVIY 217

Query: 171 NNIIYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEG 350
           N +++ L +  ++ +A   + +M ++    V  +  I  +C++    +A  + E+    G
Sbjct: 218 NTLLHALCRNGKIGRARSLMNEMANL--NNVTYNILISGYCKEENLVQALVLLEKCFAMG 275

Query: 351 DLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSAS 530
            +P  +    ++  LC  G V EA EV+  + S         +N +I GFC  GKV    
Sbjct: 276 LVPDVITITKVVEILCNAGRVTEAAEVLERVESLGGSLDVVAYNTLIEGFCGVGKVKVGL 335

Query: 531 KLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCL 710
             +++M  +G  P+V +++ LI   CE      A+     M   G+  +  T+ +++  L
Sbjct: 336 HFLKQMENKGYLPNVDTYNILINGFCESRMLDLALDLFNDMKTDGIKRNFVTFDAMIRGL 395

Query: 711 SQERIWLEGKNMLQV 755
             E    +G ++L++
Sbjct: 396 CSEGRIEDGFSILEL 410



 Score = 86.7 bits (213), Expect = 1e-14
 Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 2/218 (0%)
 Frame = +3

Query: 12  LLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGL 191
           LL+ +K +G+ PN   YNT++   C  G++     +++ M            YN +I G 
Sbjct: 201 LLQLIKSNGVTPNTVIYNTLLHALCRNGKIGRARSLMNEMANLNN-----VTYNILISGY 255

Query: 192 YKENRLNKAVRFLTKMESV--FPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSA 365
            KE  L +A+  L K  ++   P  +  +  +   C  G   EA +V E++   G     
Sbjct: 256 CKEENLVQALVLLEKCFAMGLVPDVITITKVVEILCNAGRVTEAAEVLERVESLGGSLDV 315

Query: 366 LVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEE 545
           + Y +LI G C  G V+     + +M +  Y P   T+N +I+GFC+   +  A  L  +
Sbjct: 316 VAYNTLIEGFCGVGKVKVGLHFLKQMENKGYLPNVDTYNILINGFCESRMLDLALDLFND 375

Query: 546 MVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVE 659
           M   G   +  +F  +I  LC +G  +     L  M E
Sbjct: 376 MKTDGIKRNFVTFDAMIRGLCSEGRIEDGFSILELMEE 413



 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 60/253 (23%), Positives = 104/253 (41%), Gaps = 37/253 (14%)
 Frame = +3

Query: 54  ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLNKAVRFL- 230
           +TY  +I   C+  R +   ++LD M  S G +     +  I+ GL +     + ++ + 
Sbjct: 74  STYRALIHKLCIFRRFDTVKQLLDEMPSSIGASPSDDIFITIVRGLSRARMTRRVIKVVD 133

Query: 231 -------TKMESVFPRAVD----------RSFRIISFCEDGVN----------------- 308
                  T    +F   +D          R F   S  E GV                  
Sbjct: 134 LAYKFHGTPSLKIFNSILDVLVKEDIDMAREFYRKSMMESGVQGDDYTFGILMKGLCLTN 193

Query: 309 --AEAKKVYEQMIGEGDLPSALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFN 482
              E  K+ + +   G  P+ ++Y +L++ LCR G +  A  +MNEM + N      T+N
Sbjct: 194 RIGEGFKLLQLIKSNGVTPNTVIYNTLLHALCRNGKIGRARSLMNEMANLNNV----TYN 249

Query: 483 AIISGFCKQGKVGSASKLMEEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEK 662
            +ISG+CK+  +  A  L+E+    G  PDV + + ++  LC  G    A   L ++   
Sbjct: 250 ILISGYCKEENLVQALVLLEKCFAMGLVPDVITITKVVEILCNAGRVTEAAEVLERVESL 309

Query: 663 GVVPDCFTWKSLL 701
           G   D   + +L+
Sbjct: 310 GGSLDVVAYNTLI 322


>ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
            lyrata] gi|297329905|gb|EFH60324.1| hypothetical protein
            ARALYDRAFT_343373 [Arabidopsis lyrata subsp. lyrata]
          Length = 1056

 Score =  248 bits (634), Expect = 2e-63
 Identities = 123/240 (51%), Positives = 165/240 (68%), Gaps = 1/240 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            A+D   +MK D I  NFAT+NT+I G  +RGR +DG+K+L+LM++S    G +I PYN++
Sbjct: 360  ALDTFNDMKTDAIRWNFATFNTLIRGLSVRGRTDDGIKILELMQDSETVHGARIDPYNSV 419

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYG YKENR   A+ FL KME +FPRAVDRSF++IS CE G   + K  Y+QM GEG +P
Sbjct: 420  IYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDVKTAYDQMTGEGGVP 479

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S +V   LI+   +EG + E  E++N+MV+  Y P +STFNA+I GFCK+ KV +  K +
Sbjct: 480  SVIVSHCLIHRYSQEGYMEETLELINDMVTRGYLPRSSTFNAVIIGFCKEDKVMNGIKFV 539

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+M  RGC PD  S++PL+  LC KGD Q+A   L  MVEK +VPD   W SL+ CLSQ+
Sbjct: 540  EDMAERGCVPDRESYNPLLEELCVKGDIQKAWLLLSLMVEKSIVPDSSMWSSLMFCLSQK 599



 Score =  102 bits (253), Expect = 2e-19
 Identities = 62/232 (26%), Positives = 112/232 (48%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           R+M   GI  +  TY  ++ G CL  R+ DG K+L +M+   G A     YN +++ L K
Sbjct: 159 RKMMASGIQGDEYTYGILMKGLCLTNRIGDGFKLLQIMKTC-GVAPNTVVYNTLLHALCK 217

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   +++M+   P  V  +  I ++C +    ++  + E+    G +P  +   
Sbjct: 218 NGKVGRARSLMSEMKE--PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGLVPDVVTVT 275

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC EG V EA EV+  + S          N ++ G+C  GK+  A +  +EM  +
Sbjct: 276 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCAVGKMRVAQRFFQEMERK 335

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLS 713
           G  P+V +++ LI   C+ G    A+ T   M    +  +  T+ +L+  LS
Sbjct: 336 GYLPNVETYNLLIAGFCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 387



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 60/227 (26%), Positives = 100/227 (44%), Gaps = 5/227 (2%)
 Frame = +3

Query: 54  ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLNKAVRFLT 233
           +TY  +    C+  R +   ++LD M ES G       +  II G +   RL K V  + 
Sbjct: 65  STYRALFYKLCVFRRFDTVYQLLDEMPESTGLPPDDAIFVTIIRG-FGRARLTKRVISVV 123

Query: 234 KMESVFPRAVDRSFRIISFCEDGVNAE----AKKVYEQ-MIGEGDLPSALVYVSLINGLC 398
            + S F   +  S ++ +   D +  E    A++ + + M+  G       Y  L+ GLC
Sbjct: 124 DLVSKF--GIKPSLKVFNSILDVLVKEDIDIAREFFRRKMMASGIQGDEYTYGILMKGLC 181

Query: 399 REGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGRGCCPDVG 578
               + + F+++  M +    P    +N ++   CK GKVG A  LM EM      P+  
Sbjct: 182 LTNRIGDGFKLLQIMKTCGVAPNTVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDV 237

Query: 579 SFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
           +F+ LI A C +    +++  L K    G+VPD  T   ++  L  E
Sbjct: 238 TFNILISAYCNEQKLIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNE 284


>ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g17525, mitochondrial; Flags: Precursor
            gi|330251547|gb|AEC06641.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 626

 Score =  246 bits (629), Expect = 6e-63
 Identities = 122/240 (50%), Positives = 164/240 (68%), Gaps = 1/240 (0%)
 Frame = +3

Query: 3    AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
            A+D   +MK D I  NFAT+NT+I G  + GR +DGLK+L++M++S    G +I PYN +
Sbjct: 372  ALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCV 431

Query: 180  IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
            IYG YKENR   A+ FL KME +FPRAVDRSF++IS CE G   + K  Y+QMIGEG +P
Sbjct: 432  IYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP 491

Query: 360  SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
            S +V   LI+   + G + E+ E++N+MV+  Y P +STFNA+I GFCKQ KV +  K +
Sbjct: 492  SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFV 551

Query: 540  EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
            E+M  RGC PD  S++PL+  LC KGD Q+A     +MVEK +VPD   W SL+ CLSQ+
Sbjct: 552  EDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 611



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 62/232 (26%), Positives = 111/232 (47%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           R+M   GI  +  TY  ++ G  L  R+ DG K+L +M+ S G A     YN +++ L K
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTS-GVAPNAVVYNTLLHALCK 229

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   +++M+   P  V  +  I ++C +    ++  + E+    G +P  +   
Sbjct: 230 NGKVGRARSLMSEMKE--PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVT 287

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC EG V EA EV+  + S          N ++ G+C  GK+  A +   EM  +
Sbjct: 288 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 347

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLS 713
           G  P+V +++ LI   C+ G    A+ T   M    +  +  T+ +L+  LS
Sbjct: 348 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 399



 Score = 63.5 bits (153), Expect = 9e-08
 Identities = 59/227 (25%), Positives = 99/227 (43%), Gaps = 5/227 (2%)
 Frame = +3

Query: 54  ATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYKENRLNKAVRFLT 233
           +TY  +    C+  R +   ++LD M +S G       +  II G +   RL K V  + 
Sbjct: 77  STYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRG-FGRARLIKRVISVV 135

Query: 234 KMESVFPRAVDRSFRIISFCEDGVNAE----AKKVY-EQMIGEGDLPSALVYVSLINGLC 398
            + S F   +  S ++ +   D +  E    A++ +  +M+  G       Y  L+ GL 
Sbjct: 136 DLVSKF--GIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLS 193

Query: 399 REGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGRGCCPDVG 578
               + + F+++  M +    P A  +N ++   CK GKVG A  LM EM      P+  
Sbjct: 194 LTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDV 249

Query: 579 SFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
           +F+ LI A C +    +++  L K    G VPD  T   ++  L  E
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNE 296


>gb|AAO72718.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 532

 Score =  246 bits (629), Expect = 6e-63
 Identities = 122/240 (50%), Positives = 164/240 (68%), Gaps = 1/240 (0%)
 Frame = +3

Query: 3   AIDLLREMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAG-QITPYNNI 179
           A+D   +MK D I  NFAT+NT+I G  + GR +DGLK+L++M++S    G +I PYN +
Sbjct: 271 ALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCV 330

Query: 180 IYGLYKENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLP 359
           IYG YKENR   A+ FL KME +FPRAVDRSF++IS CE G   + K  Y+QMIGEG +P
Sbjct: 331 IYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVP 390

Query: 360 SALVYVSLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLM 539
           S +V   LI+   + G + E+ E++N+MV+  Y P +STFNA+I GFCKQ KV +  K +
Sbjct: 391 SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFV 450

Query: 540 EEMVGRGCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLSQE 719
           E+M  RGC PD  S++PL+  LC KGD Q+A     +MVEK +VPD   W SL+ CLSQ+
Sbjct: 451 EDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCLSQK 510



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 62/232 (26%), Positives = 111/232 (47%)
 Frame = +3

Query: 18  REMKMDGIDPNFATYNTMIAGFCLRGRVEDGLKMLDLMEESRGPAGQITPYNNIIYGLYK 197
           R+M   GI  +  TY  ++ G  L  R+ DG K+L +M+ S G A     YN +++ L K
Sbjct: 70  RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTS-GVAPNAVVYNTLLHALCK 128

Query: 198 ENRLNKAVRFLTKMESVFPRAVDRSFRIISFCEDGVNAEAKKVYEQMIGEGDLPSALVYV 377
             ++ +A   +++M+   P  V  +  I ++C +    ++  + E+    G +P  +   
Sbjct: 129 NGKVGRARSLMSEMKE--PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVT 186

Query: 378 SLINGLCREGDVREAFEVMNEMVSHNYFPIASTFNAIISGFCKQGKVGSASKLMEEMVGR 557
            ++  LC EG V EA EV+  + S          N ++ G+C  GK+  A +   EM  +
Sbjct: 187 KVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERK 246

Query: 558 GCCPDVGSFSPLIGALCEKGDFQRAVGTLLKMVEKGVVPDCFTWKSLLLCLS 713
           G  P+V +++ LI   C+ G    A+ T   M    +  +  T+ +L+  LS
Sbjct: 247 GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLS 298