BLASTX nr result
ID: Sinomenium22_contig00035027
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00035027
(854 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006603878.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-36
ref|XP_004489421.1| PREDICTED: pentatricopeptide repeat-containi... 104 2e-35
ref|XP_002873720.1| pentatricopeptide repeat-containing protein ... 92 6e-32
ref|XP_006400058.1| hypothetical protein EUTSA_v10012971mg [Eutr... 89 7e-32
ref|NP_197038.1| pentatricopeptide repeat-containing protein [Ar... 90 2e-31
ref|XP_006290195.1| hypothetical protein CARUB_v10003880mg [Caps... 79 4e-28
ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-26
emb|CBI28140.3| unnamed protein product [Vitis vinifera] 78 1e-26
gb|EYU19608.1| hypothetical protein MIMGU_mgv1a003193mg [Mimulus... 70 1e-26
ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containi... 74 9e-25
ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prun... 71 1e-24
ref|XP_006601143.1| PREDICTED: pentatricopeptide repeat-containi... 79 2e-24
ref|XP_007161217.1| hypothetical protein PHAVU_001G0518001g, par... 77 2e-24
ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat... 70 3e-24
ref|XP_004291465.1| PREDICTED: pentatricopeptide repeat-containi... 76 3e-24
ref|XP_002314675.1| pentatricopeptide repeat-containing family p... 74 2e-23
gb|EXB96783.1| hypothetical protein L484_001891 [Morus notabilis] 75 2e-23
ref|XP_007225539.1| hypothetical protein PRUPE_ppa026705mg [Prun... 75 4e-23
gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays] 69 6e-23
ref|XP_007032614.1| Pentatricopeptide repeat (PPR) superfamily p... 113 8e-23
>ref|XP_006603878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Glycine max]
Length = 706
Score = 106 bits (265), Expect(2) = 4e-36
Identities = 68/160 (42%), Positives = 91/160 (56%), Gaps = 6/160 (3%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
E+VLGSLL AC HGKL+LGE ++REL+QM+ +A+ A
Sbjct: 494 EVVLGSLLGACYAHGKLRLGEKIMRELVQMDPLNTEYHILLSNMYALCGKAD-----KAN 548
Query: 181 SQASG-N*KGTRR---MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVP 348
S +G R+ MSSI +GQ+H+FIAGDKSHP+ D+Y+ LD+MI +LR AGYVP
Sbjct: 549 SLRKVLKNRGIRKVPGMSSIYVDGQLHRFIAGDKSHPRTADIYMKLDDMICKLRLAGYVP 608
Query: 349 NIVSKIFCF*KYVDDAHEV--EEEQMLFFHSDLVCPCTSL 462
N ++ DD E E EQ+LF HS+ + C L
Sbjct: 609 NTNCQVLFGCSNGDDCMEAFEEVEQVLFTHSEKLALCFGL 648
Score = 72.4 bits (176), Expect(2) = 4e-36
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3
Query: 447 PLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
PL IFKNLRICQDCHSA+K+ S IYKREIV+RD+ RFH F Q C
Sbjct: 656 PLCIFKNLRICQDCHSAIKIASDIYKREIVVRDRYRFHSFKQGSCSC 702
>ref|XP_004489421.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15340,
mitochondrial-like [Cicer arietinum]
Length = 635
Score = 104 bits (260), Expect(2) = 2e-35
Identities = 64/156 (41%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
E+VLGSLL +C HGKL+LGE ++REL++M+ + +
Sbjct: 423 EVVLGSLLGSCYAHGKLKLGEKIMRELVEMDPFNTEYHIVLSNMYALSGKVDKANSLRKV 482
Query: 181 SQASGN*KGTRRMSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNIVS 360
+ G K MSSI A+GQ+HQFIAGDKSH + ++Y+ LDEMI RLR GYVPN
Sbjct: 483 LKKKGI-KKAPGMSSIYADGQLHQFIAGDKSHTRTSEIYMKLDEMICRLRFGGYVPNTSC 541
Query: 361 KIFCF*KYVDDAHEV--EEEQMLFFHSDLVCPCTSL 462
++ DD E E EQ+LF HS+ + C L
Sbjct: 542 QVLFGCSNRDDYSEALEEVEQVLFTHSEKLALCFGL 577
Score = 72.4 bits (176), Expect(2) = 2e-35
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 441 GLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
G PL+IFKNLRICQDCHSA+K+ S +Y+REIV+RD+ RFH F C
Sbjct: 583 GSPLYIFKNLRICQDCHSAIKIASDVYRREIVVRDRYRFHSFKNGSCSC 631
>ref|XP_002873720.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297319557|gb|EFH49979.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 623
Score = 92.0 bits (227), Expect(2) = 6e-32
Identities = 57/157 (36%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
E+VLGSLL +C +HGKL++ E + RELIQM R++ G
Sbjct: 418 EVVLGSLLGSCSVHGKLEIAERIKRELIQMSPGHTEYQILMSNMYVAEGRSD----IADG 473
Query: 181 SQASGN*KGTRR---MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPN 351
+ S +G R+ +SSI N +H+F +GD+SHP+ ++VY+ L+E+I R+RSAGYVP+
Sbjct: 474 LRGSLRNRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEVYLKLNEVIERIRSAGYVPD 533
Query: 352 IVSKIFCF*KYVDDAHEVEEEQMLFFHSDLVCPCTSL 462
I + + E+EQ L HS+ + C L
Sbjct: 534 ISGLV-----SPSEGDLEEKEQALCCHSEKLAVCFGL 565
Score = 73.2 bits (178), Expect(2) = 6e-32
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3
Query: 438 PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
P PL +FKNLRIC+DCHSAMK++S +Y REI+IRD+NRFH+F C
Sbjct: 570 PRTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSC 619
>ref|XP_006400058.1| hypothetical protein EUTSA_v10012971mg [Eutrema salsugineum]
gi|557101148|gb|ESQ41511.1| hypothetical protein
EUTSA_v10012971mg [Eutrema salsugineum]
Length = 623
Score = 89.4 bits (220), Expect(2) = 7e-32
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
E+VLGSLL +C +HGKL++ E + REL+QM R++ G
Sbjct: 418 EVVLGSLLGSCSVHGKLEIAERVKRELVQMSPDNMGYQILVSNMYAAEGRSD----VVDG 473
Query: 181 SQASGN*KGTRR---MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPN 351
+ S +G ++ MSSI NG I++F +GD+SHP+ +++Y+ L+E+I R+RSAGYVP
Sbjct: 474 LRGSMRNQGLKKIPGMSSIHLNGSIYRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPG 533
Query: 352 IVSKIFCF*KYVDDAHEVEEEQMLFFHSDLVCPCTSL 462
+ I + + EQ L HS+ + C L
Sbjct: 534 VSGLI-----SPSEGDLEDNEQALSCHSEKLAVCFGL 565
Score = 75.5 bits (184), Expect(2) = 7e-32
Identities = 32/50 (64%), Positives = 40/50 (80%)
Frame = +3
Query: 438 PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
P PL++FKNLRIC+DCHSAMK++S IY REI+IRD+NRFH+F C
Sbjct: 570 PRTPLYVFKNLRICRDCHSAMKIVSKIYDREIIIRDRNRFHQFKGGSCSC 619
>ref|NP_197038.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180838|sp|Q9LXE8.1|PP386_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g15340, mitochondrial; Flags: Precursor
gi|7671503|emb|CAB89344.1| putative protein [Arabidopsis
thaliana] gi|332004768|gb|AED92151.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 89.7 bits (221), Expect(2) = 2e-31
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 3/157 (1%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
E+VLGSLL +C +HGK+++ E + RELIQM R++ G
Sbjct: 418 EVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSD----IADG 473
Query: 181 SQASGN*KGTRR---MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPN 351
+ S +G R+ +SSI N +H+F +GD+SHP+ +++Y+ L+E+I R+RSAGYVP+
Sbjct: 474 LRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPD 533
Query: 352 IVSKIFCF*KYVDDAHEVEEEQMLFFHSDLVCPCTSL 462
+ + + E+EQ L HS+ + C L
Sbjct: 534 VSGLV-----SHSEGDLEEKEQALCCHSEKLAVCFGL 565
Score = 73.9 bits (180), Expect(2) = 2e-31
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3
Query: 438 PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
P PL +FKNLRIC+DCHSAMK++S +Y REI+IRD+NRFH+F C
Sbjct: 570 PSTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSC 619
>ref|XP_006290195.1| hypothetical protein CARUB_v10003880mg [Capsella rubella]
gi|482558901|gb|EOA23093.1| hypothetical protein
CARUB_v10003880mg [Capsella rubella]
Length = 624
Score = 79.0 bits (193), Expect(2) = 4e-28
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
E+VLGSLL +C +H KL + E + +EL+QM R++ G
Sbjct: 419 EVVLGSLLGSCSVHRKLDIAERIKQELVQMNPGNTECQILMSNMYVAEGRSD----IADG 474
Query: 181 SQASGN*KGTRR---MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPN 351
+ S +G R+ +SSI N +H+F +GD+SHP+ + +Y+ L+E+I R+RSAGYV +
Sbjct: 475 LRRSLRNRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKVIYLKLNEVIERIRSAGYVLD 534
Query: 352 IVSKIFCF*KYVDDAHEVEEEQMLFFHSDLVCPCTSL 462
+ + + E+EQ L HS+ + C L
Sbjct: 535 VSGLV-----SHSEGDLEEKEQALCCHSEKLAVCFGL 566
Score = 73.2 bits (178), Expect(2) = 4e-28
Identities = 31/50 (62%), Positives = 39/50 (78%)
Frame = +3
Query: 438 PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
P PL +FKNLRIC+DCHSAMK++S +Y REI+IRD+NRFH+F C
Sbjct: 571 PRTPLLVFKNLRICRDCHSAMKIVSKVYDREIIIRDRNRFHQFKGGSCSC 620
>ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 77.8 bits (190), Expect(2) = 1e-26
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
A +LS PG P+ + KNLR+C DCHSAMK IS +Y REI++RD+NRFH FT+ C
Sbjct: 650 AFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSC 707
Score = 69.3 bits (168), Expect(2) = 1e-26
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 7 VLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXF--GWRAE*G*FFPAG 180
VL LL+AC +HG L + E ++LI+++ W A
Sbjct: 510 VLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKK---MRE 566
Query: 181 SQASGN*KGTRRMSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNIVS 360
N K S+I G +H+F+ GD SHPQ+ ++Y LD+M+ RL+SAGYVP+
Sbjct: 567 LMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSE 626
Query: 361 KIFCF*KYVDDAHEVEEEQMLFFHSD 438
+F D E E+E L HS+
Sbjct: 627 VLF-------DMDEKEKENELSLHSE 645
>emb|CBI28140.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 77.8 bits (190), Expect(2) = 1e-26
Identities = 33/58 (56%), Positives = 42/58 (72%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
A +LS PG P+ + KNLR+C DCHSAMK IS +Y REI++RD+NRFH FT+ C
Sbjct: 519 AFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSC 576
Score = 69.3 bits (168), Expect(2) = 1e-26
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Frame = +1
Query: 7 VLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXF--GWRAE*G*FFPAG 180
VL LL+AC +HG L + E ++LI+++ W A
Sbjct: 379 VLVGLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKK---MRE 435
Query: 181 SQASGN*KGTRRMSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNIVS 360
N K S+I G +H+F+ GD SHPQ+ ++Y LD+M+ RL+SAGYVP+
Sbjct: 436 LMVERNIKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSE 495
Query: 361 KIFCF*KYVDDAHEVEEEQMLFFHSD 438
+F D E E+E L HS+
Sbjct: 496 VLF-------DMDEKEKENELSLHSE 514
>gb|EYU19608.1| hypothetical protein MIMGU_mgv1a003193mg [Mimulus guttatus]
Length = 601
Score = 70.1 bits (170), Expect(3) = 1e-26
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +3
Query: 420 AVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYCG 590
A ++ PG+P+ + KNLR+C+DCH A+K IS I +REI++RD NR+H F CG
Sbjct: 542 ATINSGPGVPIRVTKNLRVCEDCHIAIKFISKITEREIIVRDTNRYHHFENGICSCG 598
Score = 57.8 bits (138), Expect(3) = 1e-26
Identities = 26/74 (35%), Positives = 44/74 (59%)
Frame = +1
Query: 217 MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNIVSKIFCF*KYVDDA 396
+S++ GQ+H F+AGD+SHPQ +++Y LD +I +++ GYVP + + D
Sbjct: 469 ISNVELRGQVHTFLAGDRSHPQCEEIYRELDVLIGKMKEIGYVPKTDTAL-------HDV 521
Query: 397 HEVEEEQMLFFHSD 438
+ E+E L HS+
Sbjct: 522 EDEEKENHLVVHSE 535
Score = 39.3 bits (90), Expect(3) = 1e-26
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 83 FRWNPLNTEYHILLSYMYTLAGERNEANSFRQVLKRQGIRKVPG 214
F+ P + Y++LLS +Y AG + R ++K +GI+K+PG
Sbjct: 425 FQLAPEKSGYYVLLSNIYAKAGRWKDVTLIRSIMKERGIKKIPG 468
>ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g22690-like [Glycine max]
Length = 801
Score = 74.3 bits (181), Expect(2) = 9e-25
Identities = 34/61 (55%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQ-SFSYCG 590
A ++S PG+P+ I KNLR+C DCH+A KL+S IY REI++RD+NRFH F + S S C
Sbjct: 740 AYGLISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCD 799
Query: 591 Y 593
Y
Sbjct: 800 Y 800
Score = 66.6 bits (161), Expect(2) = 9e-25
Identities = 39/116 (33%), Positives = 58/116 (50%)
Frame = +1
Query: 7 VLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAGSQ 186
V GS LAAC LH ++LGE+ ++ + +E R + +
Sbjct: 600 VFGSFLAACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMK 659
Query: 187 ASGN*KGTRRMSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNI 354
G K +SSI NG +H+FI GD+ HP A+ VY ++DEM +L AGY P++
Sbjct: 660 DEGIVKEPG-VSSIEVNGLLHEFIMGDREHPDAKKVYEMIDEMREKLEDAGYTPDV 714
>ref|XP_007206274.1| hypothetical protein PRUPE_ppa016070mg [Prunus persica]
gi|462401916|gb|EMJ07473.1| hypothetical protein
PRUPE_ppa016070mg [Prunus persica]
Length = 608
Score = 70.9 bits (172), Expect(2) = 1e-24
Identities = 48/148 (32%), Positives = 71/148 (47%), Gaps = 3/148 (2%)
Frame = +1
Query: 4 IVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAGS 183
IV G+LLAAC +H L E REL+++E R G
Sbjct: 406 IVWGALLAACKIHKNPNLAEVAARELLELEPQNCGYNILMSNIYAASNRWN----EVDGV 461
Query: 184 QASGN*KGTRR---MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNI 354
+ +GT++ +SSI NG +H FI GDK+HPQ + +Y +L EM +L+ AGY PN
Sbjct: 462 RKYMKDRGTKKEPGLSSIEVNGSVHDFIMGDKAHPQTRKIYEMLAEMTKKLKEAGYTPNT 521
Query: 355 VSKIFCF*KYVDDAHEVEEEQMLFFHSD 438
+ + E E+E + +HS+
Sbjct: 522 S-------VVLQNIDEEEKETAVNYHSE 542
Score = 69.7 bits (169), Expect(2) = 1e-24
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYCG 590
A ++S G P+ I KNLR+C+DCH+A KL+S IY R +++RD+NRFH F + CG
Sbjct: 547 AFGLISTAAGTPIRIVKNLRVCEDCHTATKLLSKIYGRVMIVRDRNRFHHFRDGYCSCG 605
>ref|XP_006601143.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like isoform X1 [Glycine max]
gi|571538394|ref|XP_006601144.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21065-like isoform X2 [Glycine max]
gi|571538398|ref|XP_006601145.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21065-like isoform X3 [Glycine max]
gi|571538402|ref|XP_006601146.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21065-like isoform X4 [Glycine max]
Length = 615
Score = 79.0 bits (193), Expect(2) = 2e-24
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYCG 590
A A+LS PG P+ I KNLR+C+DCHSA K IS +Y REIV+RD+NRFH F CG
Sbjct: 554 AFALLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYNREIVVRDRNRFHHFKNGLCSCG 612
Score = 61.2 bits (147), Expect(2) = 2e-24
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
+++ S++ AC G+L+LGE + +ELI+ E R E
Sbjct: 412 QVIWRSIVTACHARGELKLGESVAKELIRREPSHESNYVLLSNIYAKLLRWE----KKTK 467
Query: 181 SQASGN*KGTRRM---SSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPN 351
+ + KG R++ + I N +I++F+AGDKSH Q +++Y +++EM ++ AGYVP
Sbjct: 468 VREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGREIKRAGYVPT 527
Query: 352 IVSKIFCF*KYVDDAHEVEEEQMLFFHSD 438
+ D E ++E L+ HS+
Sbjct: 528 TSQVLL-------DIDEEDKEDALYRHSE 549
>ref|XP_007161217.1| hypothetical protein PHAVU_001G0518001g, partial [Phaseolus
vulgaris] gi|561034681|gb|ESW33211.1| hypothetical
protein PHAVU_001G0518001g, partial [Phaseolus vulgaris]
Length = 380
Score = 77.4 bits (189), Expect(2) = 2e-24
Identities = 34/59 (57%), Positives = 41/59 (69%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYCG 590
A +LS PG P+ I KNLR+C+DCHSA K IS +Y REIV+RD+NRFH F CG
Sbjct: 319 AFGLLSTPPGTPIRIVKNLRVCEDCHSATKFISKVYSREIVVRDRNRFHHFKNGLCSCG 377
Score = 62.4 bits (150), Expect(2) = 2e-24
Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
+++ S++ AC G+L+LGE + +EL++ E R E
Sbjct: 177 QVIWRSIVTACNARGELRLGESMAKELVRSEPMHESNYVLLSNIYAKLMRWE----KKTK 232
Query: 181 SQASGN*KGTRRM---SSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPN 351
+ + KG R++ + I N +I++F+AGDKSH Q +++Y +++EM ++ AGYVP
Sbjct: 233 VREMMDVKGMRKIPGSTMIEMNNEIYEFVAGDKSHDQYKEIYEMVEEMGKEIKRAGYVPT 292
Query: 352 IVSKIFCF*KYVDDAHEVEEEQMLFFHSD 438
+ D E ++E L+ HS+
Sbjct: 293 TSQVLL-------DIDEEDKEDALYRHSE 314
>ref|XP_004971712.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Setaria italica]
Length = 667
Score = 69.7 bits (169), Expect(2) = 3e-24
Identities = 43/144 (29%), Positives = 75/144 (52%)
Frame = +1
Query: 7 VLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAGSQ 186
+LG+LLAAC +HG L +GE + + L++++ R E
Sbjct: 466 ILGTLLAACRVHGNLDIGELVAKRLLELDPENSTVYILLSNMYAKSNRWEDVRRLRQSIM 525
Query: 187 ASGN*KGTRRMSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNIVSKI 366
G K S I NG IH+F+AGD+SHP + ++Y L+ +I L + GY P+I +++
Sbjct: 526 EKGI-KKEPGCSLIEMNGMIHEFVAGDRSHPMSNEIYSKLENIITDLENLGYSPDI-TEV 583
Query: 367 FCF*KYVDDAHEVEEEQMLFFHSD 438
F + E E+++++++HS+
Sbjct: 584 FV------EVAEKEKQKIIYWHSE 601
Score = 69.3 bits (168), Expect(2) = 3e-24
Identities = 31/56 (55%), Positives = 39/56 (69%)
Frame = +3
Query: 420 AVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
A+LS P + I KNLR+C DCHSA+KLIS +Y RE+V+RD+ RFH F F C
Sbjct: 608 ALLSSEPNTVIRIVKNLRMCLDCHSAIKLISRLYGREVVVRDRTRFHHFRHGFCSC 663
>ref|XP_004291465.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Fragaria vesca subsp. vesca]
Length = 588
Score = 75.9 bits (185), Expect(2) = 3e-24
Identities = 34/58 (58%), Positives = 41/58 (70%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
A A+L+ PG P+ I KNLR+C+DCHSA K IS IY REIV+RD+NRFH F C
Sbjct: 527 AFALLNTPPGTPIRIVKNLRVCEDCHSATKFISKIYNREIVVRDRNRFHHFKNGLCSC 584
Score = 63.2 bits (152), Expect(2) = 3e-24
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Frame = +1
Query: 4 IVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXF--GWRAE*G*FFPA 177
IVL +L++AC HG+L+LGE + +ELI+ E W +
Sbjct: 386 IVLRTLISACRAHGELKLGESITKELIRAEPMHESNYVLLSNIYAKMNHWEKK------T 439
Query: 178 GSQASGN*KGTRRM---SSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVP 348
++ + + KG +++ + I + +I++F+AGDKSH Q++++Y ++DEM +++ AGYV
Sbjct: 440 KTREAMDKKGMKKIPGSTMIELDNEIYEFVAGDKSHKQSKEIYEMVDEMGRKMKRAGYVA 499
Query: 349 NIVSKIFCF*KYVDDAHEVEEEQMLFFHSD 438
+ D E ++E L HS+
Sbjct: 500 TTSEVLL-------DIDEEDKEDALNRHSE 522
>ref|XP_002314675.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222863715|gb|EEF00846.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 845
Score = 74.3 bits (181), Expect(2) = 2e-23
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYCG 590
A A++S G+P+ + KNLRIC DCHS KL+S Y REI++RD NRFH F Q F CG
Sbjct: 784 AFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREIIVRDNNRFHFFQQGFCSCG 842
Score = 62.0 bits (149), Expect(2) = 2e-23
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
+++ GSLLAAC +H + + Y + +++ R + A
Sbjct: 642 DVIWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWD----DVAK 697
Query: 181 SQASGN*KGTRRM---SSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPN 351
+ KG +M SSI NG+I +F GD+SHP+ + +L E+ RLR GYVP+
Sbjct: 698 VRLHLKEKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPD 757
Query: 352 IVSKIFCF*KYVDDAHEVEEEQMLFFHSD 438
+ + + D +E E+E +L HS+
Sbjct: 758 LTNVLL-------DVNEKEKEYLLSRHSE 779
>gb|EXB96783.1| hypothetical protein L484_001891 [Morus notabilis]
Length = 599
Score = 75.1 bits (183), Expect(2) = 2e-23
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
A A+L+ PG P+ I KNLR+C DCHSA K IS IY REIV+RD+NRFH F C
Sbjct: 538 AFALLNTPPGTPIRIVKNLRVCSDCHSATKFISKIYNREIVVRDRNRFHHFMDGLCSC 595
Score = 61.2 bits (147), Expect(2) = 2e-23
Identities = 44/145 (30%), Positives = 70/145 (48%)
Frame = +1
Query: 4 IVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAGS 183
++L +L++AC HGKL+LGE + + LI E R E
Sbjct: 397 VILRTLVSACRAHGKLRLGETISKSLISNEPTHESNYVLLSNIYAKMSRWENKTKIRKMM 456
Query: 184 QASGN*KGTRRMSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNIVSK 363
G K T + I + +I++F+AGDKSH Q +++Y ++DEM ++ AGYVP+
Sbjct: 457 GKKGM-KKTPGSTMIELDNEIYEFVAGDKSHKQYKEIYDMVDEMGREMKRAGYVPSTSEV 515
Query: 364 IFCF*KYVDDAHEVEEEQMLFFHSD 438
+ D E ++E L HS+
Sbjct: 516 LL-------DIDEEDKEDALNRHSE 533
>ref|XP_007225539.1| hypothetical protein PRUPE_ppa026705mg [Prunus persica]
gi|462422475|gb|EMJ26738.1| hypothetical protein
PRUPE_ppa026705mg [Prunus persica]
Length = 484
Score = 75.1 bits (183), Expect(2) = 4e-23
Identities = 34/58 (58%), Positives = 40/58 (68%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
A A+L+ PG P+ I KNLR+C DCHSA K IS IY REIV+RD+NRFH F C
Sbjct: 423 AFALLNTPPGTPIRIVKNLRVCDDCHSATKFISKIYNREIVVRDRNRFHHFKDGMCSC 480
Score = 60.5 bits (145), Expect(2) = 4e-23
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 5/150 (3%)
Frame = +1
Query: 4 IVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXX--FGWRAE*G*FFPA 177
IVL +L++AC HG+L+LGE + +ELI+ E W + A
Sbjct: 282 IVLRTLISACRAHGELKLGESITKELIRNEPMQESNYVLLSNIYAKMTHWEKK------A 335
Query: 178 GSQASGN*KGTRRM---SSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVP 348
+ + +G +++ + I + +I++F+AGDKSH Q + +Y ++DEM ++ AGY+P
Sbjct: 336 KIREVMDKRGMKKIPGSTMIELDHEIYEFVAGDKSHKQYKQIYEMVDEMGREMKRAGYIP 395
Query: 349 NIVSKIFCF*KYVDDAHEVEEEQMLFFHSD 438
+ D E ++E L HS+
Sbjct: 396 TTSEVLL-------DIDEEDKEDALNRHSE 418
>gb|AFW80179.1| hypothetical protein ZEAMMB73_142662 [Zea mays]
Length = 649
Score = 68.6 bits (166), Expect(2) = 6e-23
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +3
Query: 414 ADAVLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
A A+LS P + I KNLR+C DCH+A+KLIS +Y RE+V+RD+ RFH F F C
Sbjct: 588 AFALLSSEPNTVIRIVKNLRMCLDCHNAIKLISRLYGREVVVRDRTRFHHFRHGFCSC 645
Score = 66.2 bits (160), Expect(2) = 6e-23
Identities = 45/144 (31%), Positives = 74/144 (51%)
Frame = +1
Query: 7 VLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAGSQ 186
+ G+LLAAC +HG ++GE + L+QM+ R E
Sbjct: 448 IWGTLLAACRVHGNSEIGELVTERLLQMDPENSTVYTLLSNIYAKCNRWEDVRRLRHTIM 507
Query: 187 ASGN*KGTRRMSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSAGYVPNIVSKI 366
G K S I NG IH+F+AGD+SHP ++++Y L+ +I L + GY P+ V+++
Sbjct: 508 EKGI-KKEPGCSLIEMNGIIHEFVAGDQSHPMSKEIYCKLESIINDLNNVGYFPD-VTEV 565
Query: 367 FCF*KYVDDAHEVEEEQMLFFHSD 438
F + E E++++LF+HS+
Sbjct: 566 FV------EVAEEEKQKVLFWHSE 583
>ref|XP_007032614.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508711643|gb|EOY03540.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 633
Score = 113 bits (283), Expect = 8e-23
Identities = 71/164 (43%), Positives = 93/164 (56%), Gaps = 10/164 (6%)
Frame = +1
Query: 1 EIVLGSLLAACGLHGKLQLGEYLLRELIQMEXXXXXXXXXXXXXXXFGWRAE*G*FFPAG 180
E+VLGSLL +C HGKLQLGE+ L+ LI+M+ + +
Sbjct: 421 EVVLGSLLGSCSAHGKLQLGEHALQRLIEMDPHNTEYHILLSNMYALAGKRD-------- 472
Query: 181 SQASG-----N*KGTRR---MSSIRANGQIHQFIAGDKSHPQAQDVYVLLDEMIWRLRSA 336
QA+ KG R+ MSSI +GQ+HQF AGDKSH + QD+Y++LD MI RLRSA
Sbjct: 473 -QANALRTVLKTKGIRKVPGMSSIHVDGQVHQFSAGDKSHSKTQDIYLMLDNMIQRLRSA 531
Query: 337 GYVPNIVSKIFCF*KYVDD-AHEVEE-EQMLFFHSDLVCPCTSL 462
GYVPN S++F +D A + EE EQ LF HS+ + C L
Sbjct: 532 GYVPNTASQVFSGSDGAEDNARDSEEKEQALFLHSEKLAVCFGL 575
Score = 79.7 bits (195), Expect = 1e-12
Identities = 34/55 (61%), Positives = 44/55 (80%)
Frame = +3
Query: 423 VLSQ*PGLPLHIFKNLRICQDCHSAMKLISGIYKREIVIRDQNRFHRFTQSFSYC 587
+LS PG PL+IFKNLRICQDCH+A+K++S IY R++V+RD+NRFH F Q C
Sbjct: 575 LLSTKPGTPLYIFKNLRICQDCHAALKIVSKIYNRKVVVRDRNRFHYFKQGSCSC 629