BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00034629
         (812 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76630.1| hypothetical protein VITISV_032334 [Vitis vinifera]   315   4e-87
emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]   257   3e-68
emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera]   209   7e-52
emb|CAN74243.1| hypothetical protein VITISV_037117 [Vitis vinifera]   196   7e-48
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   145   1e-43
emb|CBI36090.3| unnamed protein product [Vitis vinifera]              137   4e-41
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]   139   5e-40
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]   130   3e-39
emb|CAN71258.1| hypothetical protein VITISV_043225 [Vitis vinifera]   157   1e-38
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   159   2e-36
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   115   4e-34
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]         108   2e-32
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...   105   1e-31
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia...   108   1e-31
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha...   108   1e-31
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           103   2e-31
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...   113   2e-31
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   109   2e-31
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697...   106   2e-31
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...   106   4e-31

>emb|CAN76630.1| hypothetical protein VITISV_032334 [Vitis vinifera]
          Length = 540

 Score =  315 bits (807), Expect(2) = 4e-87
 Identities = 161/217 (74%), Positives = 174/217 (80%), Gaps = 1/217 (0%)
 Frame = -3

Query: 762 ACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLPISHTGSVSTL 583
           +CSI DSNDS+WYPDS ATSH+ ND E VDVP VY GN RV VGNGQSL ISHTGS+STL
Sbjct: 306 SCSIPDSNDSEWYPDSCATSHLTNDSESVDVPVVYSGNERVMVGNGQSLSISHTGSLSTL 365

Query: 582 VPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIRVVLGVGRCEN 403
           +P+            GIKK LISISQLTKDNN CV FSPSGFTI +RV RV LGVGRCEN
Sbjct: 366 IPQSSLFLSNVLVVPGIKKKLISISQLTKDNNYCVIFSPSGFTIQDRVTRVALGVGRCEN 425

Query: 402 VLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFISCSDKLMGLDS 226
            LYVLD NHHA   +VSSNK  ASV L HARLGHPSF T++SLSKSGFISCS+KLMGLDS
Sbjct: 426 GLYVLDQNHHALVSIVSSNKSCASVPLWHARLGHPSFRTINSLSKSGFISCSNKLMGLDS 485

Query: 225 SLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
           SL VGCNLGK+HRL FSLNN+ C LPFDRLH DLWGP
Sbjct: 486 SLCVGCNLGKNHRLPFSLNNNRCPLPFDRLHCDLWGP 522



 Score = 33.9 bits (76), Expect(2) = 4e-87
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDD 60
           GPSP +  TGF YYAV IDD
Sbjct: 521 GPSPAFSLTGFCYYAVFIDD 540


>emb|CAN64816.1| hypothetical protein VITISV_010668 [Vitis vinifera]
          Length = 1212

 Score =  257 bits (657), Expect(2) = 3e-68
 Identities = 141/233 (60%), Positives = 161/233 (69%), Gaps = 1/233 (0%)
 Frame = -3

Query: 810 LNLKKKQSANLDEAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVG 631
           L LKKKQSAN+ EAF ACSI D NDS+W+PDSGA SHM +D E VD P +Y  N RV VG
Sbjct: 274 LKLKKKQSANIAEAFSACSIQDLNDSEWFPDSGAMSHMTSDTEVVDQPTLYSSNERVMVG 333

Query: 630 NGQSLPISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI 451
           NG SL ISHT S+S+ +P            LGIKKNLISISQLTKDNNC VTFS  GFTI
Sbjct: 334 NGXSLAISHTSSISSPIPSSSLLLSNVLVVLGIKKNLISISQLTKDNNCLVTFSSFGFTI 393

Query: 450 *NRVIRVVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLS 274
            ++V R VLGVGRCEN LYVLD  HHA     +S  PRASV L HARLGHP++ TV SLS
Sbjct: 394 QDQVTRTVLGVGRCENGLYVLDHCHHAL-MSTTSPSPRASVRLWHARLGHPNYRTVASLS 452

Query: 273 KSGFISCSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
           + G+ISCS+KL              + HRL FSLN++ CV+PFD LH  LWGP
Sbjct: 453 RLGYISCSNKL------------TWQKHRLPFSLNDERCVMPFDCLHXXLWGP 493



 Score = 28.9 bits (63), Expect(2) = 3e-68
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYA 75
           GPSPV  +TG+RYYA
Sbjct: 492 GPSPVLSSTGYRYYA 506


>emb|CAN83876.1| hypothetical protein VITISV_014759 [Vitis vinifera]
          Length = 430

 Score =  209 bits (533), Expect = 7e-52
 Identities = 109/154 (70%), Positives = 117/154 (75%)
 Frame = -3

Query: 810 LNLKKKQSANLDEAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVG 631
           L LKKKQSANL EAF  CSI D NDS+W+PDSGATSHM +D EGV+ PAVY+GN RV VG
Sbjct: 276 LKLKKKQSANLAEAFSTCSIQDFNDSEWFPDSGATSHMTSDTEGVNQPAVYYGNERVMVG 335

Query: 630 NGQSLPISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI 451
           NGQSL ISHTGS+S+LVP             GIKKNLISISQLTKDNNC VTFS SGFTI
Sbjct: 336 NGQSLAISHTGSISSLVPSSPLLLSNVLVVPGIKKNLISISQLTKDNNCYVTFSSSGFTI 395

Query: 450 *NRVIRVVLGVGRCENVLYVLD*NHHAFSFVVSS 349
            +RV RVVLGVGRCEN LYVLD  HHA     SS
Sbjct: 396 QDRVTRVVLGVGRCENGLYVLDRRHHALVSTTSS 429


>emb|CAN74243.1| hypothetical protein VITISV_037117 [Vitis vinifera]
          Length = 809

 Score =  196 bits (499), Expect = 7e-48
 Identities = 105/175 (60%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
 Frame = -3

Query: 741 NDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLPISHTGSVSTLVPKXXXX 562
           NDS+W+ +SGATSHM +D + VD PA+Y GN RV V NGQSL ISHTGS+S+ +P     
Sbjct: 85  NDSEWFXBSGATSHMTSDTKVVDQPALYXGNERVMVRNGQSLAISHTGSISSRIPFSSLL 144

Query: 561 XXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIRVVLGVGRCENVLYVLD* 382
                    IKKNLISISQLTKDNNC VTFS SGFTI ++V R VLGV RCEN LYVLD 
Sbjct: 145 LSNVLVVPNIKKNLISISQLTKDNNCLVTFSSSGFTIQDQVTRTVLGVRRCENGLYVLDR 204

Query: 381 NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFISCSDKLMGLDSSL 220
            HHA     +S  P+ASV L HARLGHP++C V SLS+ G+ISCS+KL    S +
Sbjct: 205 YHHAL-MSTTSPSPQASVRLWHARLGHPNYCIVASLSRLGYISCSNKLTPFSSKI 258


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  145 bits (367), Expect(2) = 1e-43
 Identities = 92/227 (40%), Positives = 124/227 (54%), Gaps = 2/227 (0%)
 Frame = -3

Query: 789 SANLDEAF-VACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
           SA+L EAF  +CS+     +DW+ D+GA++HM  DP  +D    Y G   V VGNG SLP
Sbjct: 276 SAHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGVSLP 335

Query: 612 ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
           I+HTG   TL P              + KNL+SIS+LT D    VTF+ + FT+ NR   
Sbjct: 336 ITHTG---TLSPVPNIHLLDVLVVPHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTG 392

Query: 432 VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
            V+  G+ +  LYVL+  + AF  V+ +   RAS  L HARLGH ++  +  L+K G +S
Sbjct: 393 RVVATGKRDGGLYVLECGNSAFISVLKNKSLRASYDLWHARLGHVNYSVISFLNKKGHLS 452

Query: 255 CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
            +  L     SL   C L K+HRL +S N        D +H DLWGP
Sbjct: 453 LTSLLP--SPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGP 497



 Score = 58.5 bits (140), Expect(2) = 1e-43
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFFD 6
           GPSP+   +GF YY + IDD +RF+W +PLK KSDFFD
Sbjct: 496 GPSPIKSNSGFLYYVIFIDDYSRFTWLYPLKFKSDFFD 533


>emb|CBI36090.3| unnamed protein product [Vitis vinifera]
          Length = 1273

 Score =  137 bits (344), Expect(2) = 4e-41
 Identities = 91/227 (40%), Positives = 124/227 (54%), Gaps = 2/227 (0%)
 Frame = -3

Query: 789  SANLDEAF-VACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
            SA+L EAF  +CS+     +DW+ D+GA++HM  DP  +D    Y G   V VGNG SLP
Sbjct: 852  SAHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSILDQSKNYMGKDSVIVGNGASLP 911

Query: 612  ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
            I+HTG++S+ VP              + KNL+SIS+LT D    VTF+ + FT+ NR   
Sbjct: 912  ITHTGTLSS-VPNIHLLDVLVVPH--LIKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTG 968

Query: 432  VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
             V+  G+ +  LYVL+  + AF  V+ +   RAS  L HARLGH ++  +  L K G +S
Sbjct: 969  RVVATGKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGHVNYFVISFLHKKGHLS 1028

Query: 255  CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
                L     SL   C L K+HRL +S N        D +H DL GP
Sbjct: 1029 LMSLLP--SPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLPGP 1073



 Score = 58.5 bits (140), Expect(2) = 4e-41
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = -1

Query: 119  GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFFD 6
            GPSP+   +GF YY + IDD +RF+W +PLK KSDFFD
Sbjct: 1072 GPSPIKSNSGFLYYVIFIDDYSRFTWLYPLKFKSDFFD 1109


>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
          Length = 1453

 Score =  139 bits (351), Expect(2) = 5e-40
 Identities = 87/230 (37%), Positives = 123/230 (53%), Gaps = 2/230 (0%)
 Frame = -3

Query: 801 KKKQSANLDEAFVA-CSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNG 625
           + + +A L EAF   CS+ + ++SDW+ D+GA++HM  DP  +D    Y G   V VGNG
Sbjct: 254 RAEPTAQLAEAFTTTCSLSNGSESDWFTDTGASAHMTPDPSQLDKVEPYHGKDCVIVGNG 313

Query: 624 QSLPISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*N 445
            SLPI+HTG++S+                 + KNL+SIS+LT D    VTFS   F + N
Sbjct: 314 ASLPITHTGTLSS---SSNLQLLDVLVVPRLTKNLLSISKLTSDFPLSVTFSHDNFVVQN 370

Query: 444 RVIRVVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKS 268
           R+  + +  G+    LYVL+  H AF+ V+ +    AS  L HARLGH +   +  L+K 
Sbjct: 371 RITGMAVAKGKRAGGLYVLERGHSAFASVLRNKNLHASFELWHARLGHVNHSILSLLNKK 430

Query: 267 GFISCSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWG 118
           G +  +  L     SL   C L KSHRL FS N     +    +H D+WG
Sbjct: 431 GQLFLTSLLP--TPSLCSTCQLAKSHRLPFSSNTTRSNVVLGLVHCDIWG 478



 Score = 52.4 bits (124), Expect(2) = 5e-40
 Identities = 22/38 (57%), Positives = 27/38 (71%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFFD 6
           G +PV    GF YY + IDD +RF+W +PLK KSDFFD
Sbjct: 478 GLAPVKSNLGFNYYVLFIDDYSRFTWLYPLKLKSDFFD 515


>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score =  130 bits (328), Expect(2) = 3e-39
 Identities = 90/227 (39%), Positives = 117/227 (51%), Gaps = 2/227 (0%)
 Frame = -3

Query: 789 SANLDEAF-VACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
           SA+L EAF  +CS+     +DW+ D+GA++HM  DP  +D    Y G   V VGNG SLP
Sbjct: 268 SAHLAEAFNTSCSLSGPEAADWFLDTGASAHMTTDPSXLDQSKNYMGKDSVIVGNGASLP 327

Query: 612 ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
           I+HTG   TL P              + KNL+SIS+LT D    VTF+ + FT+ NR   
Sbjct: 328 ITHTG---TLSPVPNIHLLDVLVVXHLTKNLLSISKLTSDFPLSVTFTNNLFTVQNRQTG 384

Query: 432 VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
             +  G+ +  LYVL+  + AF  V+ +   RAS  L HARLGH S   + SL  S    
Sbjct: 385 RXVATGKRDGGLYVLERGNSAFISVLKNKSLRASYDLWHARLGHLS---LTSLLPS---- 437

Query: 255 CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
                     SL   C L K+HRL +S N        D +H DLWGP
Sbjct: 438 ---------PSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGP 475



 Score = 58.5 bits (140), Expect(2) = 3e-39
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFFD 6
           GPSP+   +GF YY + IDD +RF+W +PLK KSDFFD
Sbjct: 474 GPSPIKSNSGFLYYVIFIDDYSRFTWLYPLKFKSDFFD 511


>emb|CAN71258.1| hypothetical protein VITISV_043225 [Vitis vinifera]
          Length = 881

 Score =  157 bits (398), Expect(2) = 1e-38
 Identities = 81/112 (72%), Positives = 89/112 (79%), Gaps = 1/112 (0%)
 Frame = -3

Query: 447 NRVIRVVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSK 271
           +RV RVVLGV RCEN LYVLD NHHA + +VSSNK   SV L HARL H SF T+ SLSK
Sbjct: 165 DRVTRVVLGVDRCENGLYVLDQNHHALASIVSSNKSCVSVPLWHARLXHTSFXTIXSLSK 224

Query: 270 SGFISCSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
           SGFIS S+KLMGL+SSL VGCN+GKSH L FSLNN+ C LPFD LH DLWGP
Sbjct: 225 SGFISXSNKLMGLBSSLCVGCNIGKSHXLHFSLNNNXCHLPFDXLHCDLWGP 276



 Score = 29.3 bits (64), Expect(2) = 1e-38
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDC 57
           GPS V   T F YYA+ IDDC
Sbjct: 275 GPSLVCSLTXFCYYAMFIDDC 295



 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 34/49 (69%), Positives = 38/49 (77%)
 Frame = -3

Query: 780 LDEAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRV 634
           + EAF AC I +SNDS WYPDSGATSH+ NDPEGVDV  VY GN + RV
Sbjct: 119 MSEAFXACLIPNSNDSKWYPDSGATSHLTNDPEGVDVSVVYSGNEQDRV 167


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  159 bits (401), Expect = 2e-36
 Identities = 96/177 (54%), Positives = 108/177 (61%), Gaps = 1/177 (0%)
 Frame = -3

Query: 810 LNLKKKQSANLDEAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVG 631
           L LKKKQSANL EAF A SI D NDS+W+PDSGATSHM +D EGV+ P VY GN RV VG
Sbjct: 406 LKLKKKQSANLAEAFSAYSIQDFNDSEWFPDSGATSHMTSDTEGVNQPDVYSGNERVMVG 465

Query: 630 NGQSLPISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI 451
           NGQSL ISHTGS+S+L+P                      S L   N             
Sbjct: 466 NGQSLAISHTGSISSLIPS---------------------SPLLLSN------------- 491

Query: 450 *NRVIRVVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVD 283
            +RV RVVLGVGRCEN LYVLD  HHA   V +++ PRASV L H RLGHP + T D
Sbjct: 492 -DRVTRVVLGVGRCENGLYVLDRRHHA--LVSTTSSPRASVRLWHTRLGHPHYRTCD 545


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  115 bits (287), Expect(2) = 4e-34
 Identities = 75/229 (32%), Positives = 107/229 (46%), Gaps = 3/229 (1%)
 Frame = -3

Query: 792 QSANLDEAFVACSILDSND---SDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQ 622
           Q   L  A  A  I D  D   ++W PDS AT+H+ N P  +     Y G+  V V +G 
Sbjct: 308 QYEELPRALAAMRITDITDQHGNEWLPDSAATAHVTNSPRSLQQSQPYHGSDAVMVADGN 367

Query: 621 SLPISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NR 442
            LPI+HTGS +                  I K+L+S+S+LT+D  C V F   G  I ++
Sbjct: 368 FLPITHTGSTNLASSSGNVPLTDVLVCPSITKSLLSVSKLTQDYPCTVEFDSDGVRINDK 427

Query: 441 VIRVVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHLHARLGHPSFCTVDSLSKSGF 262
             + +L +G   + LY L  +    +F  +  +  +    H RLGHP    +  L K+  
Sbjct: 428 ATKKLLIMGSTCDGLYCLKDDSQFKAFFSTRQQSASDEVWHRRLGHPHPQVLQQLVKTNS 487

Query: 261 ISCSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
           IS +        SL   C LGKS RL F  ++     P +R+H DLWGP
Sbjct: 488 ISINK----TSKSLCEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGP 532



 Score = 57.0 bits (136), Expect(2) = 4e-34
 Identities = 24/38 (63%), Positives = 29/38 (76%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFFD 6
           GPSP+    GFRYYAV ID  +RFSW +PLK KSDF++
Sbjct: 531 GPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYN 568


>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  108 bits (271), Expect(2) = 2e-32
 Identities = 74/227 (32%), Positives = 108/227 (47%), Gaps = 1/227 (0%)
 Frame = -3

Query: 792 QSANLDEAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
           QS    +AF A  + D    +WYPDS AT+H+     G+     Y GN  V VG+G  LP
Sbjct: 303 QSEVPTQAFSALRVSDETGKEWYPDSAATAHITASTSGLQNATTYEGNDAVLVGDGTYLP 362

Query: 612 ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
           I+H GS +    K             I+K+L+S+S+L  D  C V F  +   I +   +
Sbjct: 363 ITHVGSTTISSSKGTIPLNEVLVCPAIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLTTQ 422

Query: 432 VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
            V+  G   N LY+L+  +  F  + S+ +  AS+   H RLGH +   +  L     I 
Sbjct: 423 KVVSKGPRNNGLYMLE--NSEFVALYSNRQCAASMETWHHRLGHSNSKILQQLLTRKEIQ 480

Query: 255 CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
            +       S +   C +GKS RL F  ++   + P DR+H DLWGP
Sbjct: 481 VN---KSRTSPVCEPCQMGKSTRLQFFSSDFRALKPLDRVHCDLWGP 524



 Score = 57.4 bits (137), Expect(2) = 2e-32
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDF 12
           GPSPV    GF+YYAV +DD +RFSWFFPL+ KS F
Sbjct: 523 GPSPVVSNQGFKYYAVFVDDFSRFSWFFPLRMKSKF 558


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score =  105 bits (263), Expect(2) = 1e-31
 Identities = 66/213 (30%), Positives = 104/213 (48%)
 Frame = -3

Query: 753 ILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLPISHTGSVSTLVPK 574
           + D +  +W PDS A++H+ N+   +     Y G+  + V +G  LPI+HTGS S     
Sbjct: 318 VTDHHGHEWIPDSAASAHVTNNRHVLQQSQPYHGSDSIMVADGNFLPITHTGSGSIASSS 377

Query: 573 XXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIRVVLGVGRCENVLY 394
                        I K+L+S+S+LT D  C V F      I ++  + +L +GR  + LY
Sbjct: 378 GKIPLKEVLVCPDIVKSLLSVSKLTSDYPCSVEFDADSVRINDKATKKLLVMGRNRDGLY 437

Query: 393 VLD*NHHAFSFVVSSNKPRASVHLHARLGHPSFCTVDSLSKSGFISCSDKLMGLDSSLYV 214
            L+       +    N   + V  H RLGH +   +  L+ S  I   +K++    ++  
Sbjct: 438 SLEEPKLQVLYSTRQNSASSEV-WHRRLGHANAEVLHQLASSKSIIIINKVV---KTVCE 493

Query: 213 GCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
            C+LGKS RL F L+  +   P +R+H DLWGP
Sbjct: 494 ACHLGKSTRLPFMLSTFNASRPLERIHCDLWGP 526



 Score = 58.2 bits (139), Expect(2) = 1e-31
 Identities = 25/39 (64%), Positives = 28/39 (71%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFFDT 3
           GPSP     GFRYY V ID  +RF+WF+PLK KSDFF T
Sbjct: 525 GPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFST 563


>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
           gi|7267767|emb|CAB81170.1| retrotransposon like protein
           [Arabidopsis thaliana]
          Length = 1515

 Score =  108 bits (270), Expect(2) = 1e-31
 Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
 Frame = -3

Query: 783 NLDEAFVACSILDSNDS---DWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
           +L  AF A  + D N +   +W PDS AT+H+ N  +G+     Y G+  V VGNG  LP
Sbjct: 303 DLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLP 362

Query: 612 ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
           I+H G++   + +            GI K+L+S+S+LT D  C  TF      I ++  +
Sbjct: 363 ITHIGTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQ 422

Query: 432 VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
            +L  G     LYVL      F    S+ +  +   + H RLGHP+   +  L K+  I 
Sbjct: 423 QLLTQGNKHKGLYVL--KDVPFQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIV 480

Query: 255 CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
            +       S++   C +GK  RL F  +      P +R+H DLWGP
Sbjct: 481 VNK----TSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGP 523



 Score = 55.5 bits (132), Expect(2) = 1e-31
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFF 9
           GP+PV    GF+YY + ID+ +RF+WF+PLK KSDFF
Sbjct: 522 GPAPVTSAQGFQYYVIFIDNYSRFTWFYPLKLKSDFF 558


>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
          Length = 1392

 Score =  108 bits (270), Expect(2) = 1e-31
 Identities = 72/227 (31%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
 Frame = -3

Query: 783 NLDEAFVACSILDSNDS---DWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
           +L  AF A  + D N +   +W PDS AT+H+ N  +G+     Y G+  V VGNG  LP
Sbjct: 306 DLPNAFAAMRVSDQNQASSHEWLPDSAATAHITNTTDGLQNSQTYSGDDSVIVGNGDFLP 365

Query: 612 ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
           I+H G++   + +            GI K+L+S+S+LT D  C  TF      I ++  +
Sbjct: 366 ITHIGTIPLNISQGTLPLEDVLVCPGITKSLLSVSKLTDDYPCSFTFDSDSVVIKDKRTQ 425

Query: 432 VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
            +L  G     LYVL      F    S+ +  +   + H RLGHP+   +  L K+  I 
Sbjct: 426 QLLTQGNKHKGLYVL--KDVPFQTYYSTRQQSSDDEVWHQRLGHPNKEVLQHLIKTKAIV 483

Query: 255 CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
            +       S++   C +GK  RL F  +      P +R+H DLWGP
Sbjct: 484 VNK----TSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGP 526



 Score = 55.5 bits (132), Expect(2) = 1e-31
 Identities = 22/37 (59%), Positives = 29/37 (78%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFF 9
           GP+PV    GF+YY + ID+ +RF+WF+PLK KSDFF
Sbjct: 525 GPAPVTSAQGFQYYVIFIDNYSRFTWFYPLKLKSDFF 561


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  103 bits (258), Expect(2) = 2e-31
 Identities = 72/227 (31%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
 Frame = -3

Query: 792 QSANLDEAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
           QS +  +AF +  + DS+  +W PDS AT+H+ +    +   + Y G+  V VG+G  LP
Sbjct: 304 QSVDTAQAFSSLRVSDSSGKEWVPDSAATAHVTSSTNNLQAASPYNGSDTVLVGDGAYLP 363

Query: 612 ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
           I+H GS +                  I+K+L+S+S+L  D  C V F  +   I +   +
Sbjct: 364 ITHVGSTTISSDSGTLPLNEVLVCPDIQKSLLSVSKLCDDYPCGVYFDANKVCIIDINTQ 423

Query: 432 VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
            V+  G   N LYVL+  +  F    S+ +  AS  + H RLGH +   +  L  S  IS
Sbjct: 424 KVVSKGPRSNGLYVLE--NQEFVAFYSNRQCAASEEIWHHRLGHSNSRILQQLKSSKEIS 481

Query: 255 CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
            +   M   S +   C +GKS +L F  +N   +    R+H DLWGP
Sbjct: 482 FNKSRM---SPVCEPCQMGKSSKLQFFSSNSRELDLLGRIHCDLWGP 525



 Score = 59.3 bits (142), Expect(2) = 2e-31
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFF 9
           GPSPV    GF+YY V +DD +R+SWF+PLK KSDFF
Sbjct: 524 GPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFF 560


>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score =  113 bits (282), Expect(2) = 2e-31
 Identities = 74/216 (34%), Positives = 106/216 (49%), Gaps = 3/216 (1%)
 Frame = -3

Query: 753 ILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLPISHTGSVSTLVPK 574
           ++DS   +W+PD+GA++H+ N P  +     Y G+  V VGNG+ LPI+HTG+ S     
Sbjct: 323 MIDSRGGEWFPDTGASAHITNTPHHLQNAQPYMGSDSVMVGNGEYLPITHTGAASIASSS 382

Query: 573 XXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIRVVLGVGRCENVLY 394
                        I K L+S+S+ T D  C   F      I ++  + VL  GR    LY
Sbjct: 383 GNLILNDVLVCPQIAKPLLSVSKFTTDYPCGFDFDADNVCIYDKATKKVLLQGRNTKGLY 442

Query: 393 VLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLS--KSGFISCSDKLMGLDSS 223
            +     AF    S+ +  AS  + H RLGHP+   +  L+  KS FI+   K      S
Sbjct: 443 SI--KEPAFHAFFSTRQVAASDEVWHQRLGHPNPHILQRLASIKSVFINKRSK------S 494

Query: 222 LYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
           L V C + KS RL FS +      P +R+H D+WGP
Sbjct: 495 LCVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGP 530



 Score = 49.7 bits (117), Expect(2) = 2e-31
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDF 12
           GPSPV     F+YY VLID+ +R+ W +P+K KSDF
Sbjct: 529 GPSPVVSVQEFKYYVVLIDNYSRYCWMYPMKKKSDF 564


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  109 bits (272), Expect(2) = 2e-31
 Identities = 70/221 (31%), Positives = 108/221 (48%), Gaps = 1/221 (0%)
 Frame = -3

Query: 774 EAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLPISHTGS 595
           +AF    + D    +W+PDS AT+H+ +   G+     Y G+  V VG+G  LPI+HTGS
Sbjct: 307 QAFSTLRVSDDTGKEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGS 366

Query: 594 VSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIRVVLGVG 415
            +                  I+K+L+S+S+L  D  C V F  +   I +   + V+  G
Sbjct: 367 TTIKSSNGKIPLNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTG 426

Query: 414 RCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFISCSDKLM 238
              N LYVL+  +  F  + S+ +  A+  + H RLGH +   +  L  S  I  +    
Sbjct: 427 PRRNGLYVLE--NQEFVALYSNRQCAATEEVWHHRLGHANSKALQHLQNSKAIQIN---K 481

Query: 237 GLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
              S +   C +GKS RL F +++   + P DR+H DLWGP
Sbjct: 482 SRTSPVCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGP 522



 Score = 53.5 bits (127), Expect(2) = 2e-31
 Identities = 20/36 (55%), Positives = 28/36 (77%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDF 12
           GPSPV    G +YYA+ +DD +R+SWF+PL +KS+F
Sbjct: 521 GPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEF 556


>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
           putative protein [Arabidopsis thaliana]
          Length = 1415

 Score =  106 bits (264), Expect(2) = 2e-31
 Identities = 71/227 (31%), Positives = 106/227 (46%), Gaps = 1/227 (0%)
 Frame = -3

Query: 792 QSANLDEAFVACSILDSNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLP 613
           QS +  +AF A  + D   + W  DSGATSH+ N    +     Y G   V VGN   LP
Sbjct: 272 QSEDFSKAFAAMRVSDQKSNPWVTDSGATSHITNSTSQLQSAQPYSGEDSVIVGNSDFLP 331

Query: 612 ISHTGSVSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIR 433
           I+H GS      +             I K+L+S+S+LT D  C + F   G  + +++ +
Sbjct: 332 ITHIGSAVLTSNQGNLPLRDVLVCPNITKSLLSVSKLTSDYPCVIEFDSDGVIVKDKLTK 391

Query: 432 VVLGVGRCENVLYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFIS 256
            +L  G   N LY+L+  +  F    SS +   S  + H RLGHP+   +  L ++  I 
Sbjct: 392 QLLTKGTRHNDLYLLE--NPKFMACYSSRQQATSDEVWHMRLGHPNQDVLQQLLRNKAIV 449

Query: 255 CSDKLMGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
            S        SL   C +GK  +L F+ ++       +R+H DLWGP
Sbjct: 450 ISK----TSHSLCDACQMGKICKLPFASSDFVSSRLLERVHCDLWGP 492



 Score = 56.6 bits (135), Expect(2) = 2e-31
 Identities = 22/37 (59%), Positives = 30/37 (81%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDFF 9
           GP+PV  + GFRYY + ID+ +RF+WF+PL+ KSDFF
Sbjct: 491 GPAPVVSSQGFRYYVIFIDNYSRFTWFYPLRLKSDFF 527


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score =  106 bits (264), Expect(2) = 4e-31
 Identities = 74/222 (33%), Positives = 106/222 (47%), Gaps = 3/222 (1%)
 Frame = -3

Query: 771 AFVACSILD-SNDSDWYPDSGATSHMKNDPEGVDVPAVYFGNGRVRVGNGQSLPISHTGS 595
           AF A  I D S+DS W PDS AT+H+ N+   +     Y GN  V   +G  LPI+H GS
Sbjct: 299 AFSALHITDVSDDSGWVPDSAATAHITNNSSRLQQMQPYLGNDTVMASDGNFLPITHIGS 358

Query: 594 VSTLVPKXXXXXXXXXXXLGIKKNLISISQLTKDNNCCVTFSPSGFTI*NRVIRVVLGVG 415
            +                  I K+L+S+S+LTKD  C  TF   G  + ++    VL  G
Sbjct: 359 ANLPSTSGNLPLKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKG 418

Query: 414 RCENV-LYVLD*NHHAFSFVVSSNKPRASVHL-HARLGHPSFCTVDSLSKSGFISCSDKL 241
              +  LY L+  +  F    S+ + +A+  + H RLGHP+   +  L+    I  +   
Sbjct: 419 SSTSEGLYKLE--NPKFQMFYSTRQVKATDEVWHMRLGHPNPQVLQLLANKKAIQINKS- 475

Query: 240 MGLDSSLYVGCNLGKSHRLTFSLNNDHCVLPFDRLHYDLWGP 115
               S +   C LGKS RL F  ++     P +R+H DLWGP
Sbjct: 476 ---TSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGP 514



 Score = 55.8 bits (133), Expect(2) = 4e-31
 Identities = 22/36 (61%), Positives = 28/36 (77%)
 Frame = -1

Query: 119 GPSPVYFTTGFRYYAVLIDDCTRFSWFFPLKHKSDF 12
           GP+PV    GF+YY + ID+ +RF WF+PLKHKSDF
Sbjct: 513 GPAPVSSIQGFQYYVIFIDNRSRFCWFYPLKHKSDF 548