BLASTX nr result
ID: Sinomenium22_contig00034557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00034557
(315 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605... 79 5e-13
ref|XP_006347259.1| PREDICTED: uncharacterized protein LOC102584... 79 5e-13
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum] 79 8e-13
ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251... 78 1e-12
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum] 78 1e-12
ref|XP_007049449.1| DNA/RNA polymerases superfamily protein [The... 77 2e-12
gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subc... 76 5e-12
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 76 5e-12
ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599... 75 7e-12
gb|AAC69377.1| putative retroelement pol polyprotein [Arabidopsi... 75 7e-12
ref|XP_007014066.1| Uncharacterized protein TCM_038736 [Theobrom... 75 9e-12
ref|XP_007019780.1| CCHC-type integrase [Theobroma cacao] gi|508... 75 9e-12
gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum] 75 9e-12
ref|XP_007049837.1| DNA/RNA polymerases superfamily protein [The... 75 1e-11
ref|XP_007224141.1| hypothetical protein PRUPE_ppa016115mg [Prun... 74 2e-11
gb|AAC26240.1| contains similarity to reverse transcriptases (PF... 74 2e-11
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 74 2e-11
gb|AAD15321.1| putative reverse transcriptase [Arabidopsis thali... 74 2e-11
ref|XP_007044383.1| DNA/RNA polymerases superfamily protein [The... 74 3e-11
gb|AAC26251.1| contains similarity to reverse transcriptase (Pfa... 73 4e-11
>ref|XP_006366848.1| PREDICTED: uncharacterized protein LOC102605741 [Solanum tuberosum]
Length = 823
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G ++Y + S GL VLMQ+ +VIAYASRQ+KVHEKNYP++DLEL AVVFA+KI
Sbjct: 408 LPVEGEGFVVYCDASRIGLGCVLMQKGKVIAYASRQLKVHEKNYPIHDLELAAVVFALKI 467
>ref|XP_006347259.1| PREDICTED: uncharacterized protein LOC102584611 [Solanum tuberosum]
Length = 1107
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G +Y + SG GL VLMQ+ RVIAYASRQ+K+HE+NYP +DLEL AVVFA+KI
Sbjct: 530 LPVEGEGFTVYCDASGVGLGCVLMQQGRVIAYASRQLKIHERNYPTHDLELAAVVFALKI 589
>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
Length = 1475
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G +Y + SG GL VLMQ+ RVIAYASRQ+K+HE+NYP +DLEL AVVFA+KI
Sbjct: 965 LPVEGEGFTVYCDASGVGLGCVLMQQDRVIAYASRQLKIHERNYPTHDLELAAVVFALKI 1024
>ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251787 [Solanum
lycopersicum]
Length = 945
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/60 (61%), Positives = 48/60 (80%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G +IY + SG G+ VLMQ+ RVIAYASR++KVHE+NYP +DLEL AVVFA+KI
Sbjct: 886 LPIEGEGFMIYCDASGVGVGCVLMQQGRVIAYASRKLKVHERNYPTHDLELAAVVFALKI 945
>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
Length = 1771
Score = 78.2 bits (191), Expect = 1e-12
Identities = 37/60 (61%), Positives = 46/60 (76%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G +Y + SG GL VLMQ+ RVIAYASRQ+K+HE NYP +DLEL AVVFA+KI
Sbjct: 1121 LPVEGEGFTVYCDASGVGLGCVLMQQGRVIAYASRQLKIHEHNYPTHDLELAAVVFALKI 1180
>ref|XP_007049449.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508701710|gb|EOX93606.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 920
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/60 (61%), Positives = 47/60 (78%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G E ++Y++TS GL VLMQ +VIAYASRQ+K HE NYP +DLEL AVVFA+KI
Sbjct: 625 LPVSGKEFVVYSDTSKLGLGCVLMQDEKVIAYASRQLKKHETNYPTHDLELAAVVFALKI 684
>gb|ABA94145.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 927
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/60 (60%), Positives = 44/60 (73%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P PG +Y++ S GL VLMQ VIAYASRQ+K HE+NYP +DLEL AVVFA+KI
Sbjct: 474 LPQPGKRFTVYSDASRVGLGCVLMQEGNVIAYASRQLKKHEQNYPTHDLELAAVVFALKI 533
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/50 (72%), Positives = 42/50 (84%)
Frame = +1
Query: 163 IYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVK 312
+YT+ SG GL VLMQ +VIAYASRQ+KVHEKNYP +DLEL AVVFA+K
Sbjct: 511 VYTDASGQGLGCVLMQAGKVIAYASRQLKVHEKNYPTHDLELAAVVFALK 560
>ref|XP_006356454.1| PREDICTED: uncharacterized protein LOC102599406 [Solanum tuberosum]
Length = 859
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G +Y + SG GL VLM + R+IAYASRQ+K HE+NYP +DLEL AVVFA+KI
Sbjct: 288 IPVEGEGFTVYCDASGIGLGCVLMHQGRIIAYASRQLKSHERNYPTHDLELAAVVFALKI 347
>gb|AAC69377.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1328
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P G ++YT+ SG GL VLMQR +VIAYASRQ++ HE NYP +DLE+ AV+FA+KI
Sbjct: 755 LPEHGEPYMVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALKI 814
>ref|XP_007014066.1| Uncharacterized protein TCM_038736 [Theobroma cacao]
gi|508784429|gb|EOY31685.1| Uncharacterized protein
TCM_038736 [Theobroma cacao]
Length = 1486
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G E ++Y++ S GL VLMQ +VIAYASRQ+K HE NYP +DLEL AVVFA+KI
Sbjct: 880 LPVSGKEFVVYSDASKLGLGCVLMQDEKVIAYASRQLKKHETNYPTHDLELAAVVFALKI 939
>ref|XP_007019780.1| CCHC-type integrase [Theobroma cacao] gi|508725108|gb|EOY17005.1|
CCHC-type integrase [Theobroma cacao]
Length = 174
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/60 (60%), Positives = 46/60 (76%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G E ++Y++ S GL VLMQ +VIAYASRQ+K HE NYP +DLEL AVVFA+KI
Sbjct: 13 LPVSGKEFVVYSDASKLGLGCVLMQDEKVIAYASRQLKKHETNYPTHDLELAAVVFALKI 72
>gb|ADU56212.1| gag-pol polyprotein [Solanum lycopersicum]
Length = 624
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVK 312
+P+ G I+Y + S +GL VLMQ VIAYASRQ+KVHE+NYP +DLEL AVVFA+K
Sbjct: 330 LPVEGKNFIVYCDASYSGLGAVLMQEKNVIAYASRQLKVHERNYPTHDLELAAVVFALK 388
>ref|XP_007049837.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508702098|gb|EOX93994.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 811
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = +1
Query: 139 PMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
P+ G E ++Y++ S GL VLMQ +VIAYASRQ+K HE NYP +DLEL AVVFA+KI
Sbjct: 388 PVSGKEFVVYSDASKLGLGCVLMQDEKVIAYASRQLKKHETNYPTHDLELAAVVFALKI 446
>ref|XP_007224141.1| hypothetical protein PRUPE_ppa016115mg [Prunus persica]
gi|462421077|gb|EMJ25340.1| hypothetical protein
PRUPE_ppa016115mg [Prunus persica]
Length = 1269
Score = 74.3 bits (181), Expect = 2e-11
Identities = 38/63 (60%), Positives = 45/63 (71%)
Frame = +1
Query: 127 DEDVPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFA 306
+E P +IY++ S GL VLMQ RVIAYASRQ+K HE NYPV+DLEL AVVFA
Sbjct: 646 EETFPDDSGNFVIYSDASQQGLGCVLMQHGRVIAYASRQLKKHELNYPVHDLELAAVVFA 705
Query: 307 VKI 315
+KI
Sbjct: 706 LKI 708
>gb|AAC26240.1| contains similarity to reverse transcriptases (PFam: rvt.hmm,
score: 116.22) [Arabidopsis thaliana]
Length = 1322
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P G +YT+ SG GL VLMQR +VIAYASRQ++ HE NYP +DLE+ AV+FA+KI
Sbjct: 812 LPEHGEPYSVYTDASGVGLGCVLMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALKI 871
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/52 (67%), Positives = 42/52 (80%)
Frame = +1
Query: 160 IIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
++Y + S GL VLMQ +VIAYASRQ+KVHEKNYP +DLEL AVVFA+KI
Sbjct: 1306 VVYCDASRVGLGCVLMQNGKVIAYASRQLKVHEKNYPTHDLELAAVVFALKI 1357
>gb|AAD15321.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7270688|emb|CAB77850.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 839
Score = 73.9 bits (180), Expect = 2e-11
Identities = 34/60 (56%), Positives = 45/60 (75%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P G ++YT+ SG GL LMQR +VIAYASRQ++ HE NYP +DLE+ AV+FA+KI
Sbjct: 705 LPEHGEPYMVYTDASGVGLGCALMQRGKVIAYASRQLRKHEGNYPTHDLEMAAVIFALKI 764
>ref|XP_007044383.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508708318|gb|EOY00215.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1537
Score = 73.6 bits (179), Expect = 3e-11
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P+ G E ++Y++ S GL VLMQ +VIAYASRQ+K HE NYP +DLEL VVFA+KI
Sbjct: 879 LPVSGKEFVVYSDASKLGLGCVLMQDEKVIAYASRQLKKHETNYPTHDLELATVVFALKI 938
>gb|AAC26251.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score:
33.26) [Arabidopsis thaliana] gi|7267139|emb|CAB80807.1|
putative transposon protein [Arabidopsis thaliana]
Length = 973
Score = 73.2 bits (178), Expect = 4e-11
Identities = 35/60 (58%), Positives = 44/60 (73%)
Frame = +1
Query: 136 VPMPGVELIIYTNTSGTGLRFVLMQRARVIAYASRQIKVHEKNYPVYDLELTAVVFAVKI 315
+P G +YT+ S GL VLMQ+ VIAYASRQ++ HEKNYP +DLE+ AVVFA+KI
Sbjct: 398 LPEEGEPYTVYTDASVVGLECVLMQKGSVIAYASRQLRKHEKNYPTHDLEMAAVVFALKI 457