BLASTX nr result

ID: Sinomenium22_contig00034202 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00034202
         (788 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]   138   2e-30
ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulg...   108   2e-21
gb|AFW86910.1| putative cytochrome C oxidase subunit II family p...   103   9e-20
tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II fa...    99   2e-18
gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidas...    99   2e-18
gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sor...    99   2e-18
gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondr...    99   2e-18
gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sor...    99   2e-18
tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II fa...    82   3e-13
ref|XP_006828094.1| hypothetical protein AMTR_s00151p00074930 [A...    52   2e-09
tpg|DAA46810.1| TPA: hypothetical protein ZEAMMB73_014568 [Zea m...    68   4e-09

>emb|CAN61508.1| hypothetical protein VITISV_000627 [Vitis vinifera]
          Length = 201

 Score =  138 bits (348), Expect = 2e-30
 Identities = 74/125 (59%), Positives = 80/125 (64%)
 Frame = -1

Query: 674 VVREASGLPVISYSRRRETIKTIACQKRGVEVVRPIPRNAPKEPMVPFLLLLEVHIPLLG 495
           +VREASGLPVIS+SRRRET+ TIACQKRGVEVVRPIPRNAP       +L++        
Sbjct: 1   MVREASGLPVISHSRRRETLITIACQKRGVEVVRPIPRNAPSIGAYGSILVV-------- 52

Query: 494 VERYTRNRCSACNVR*RR*SSESIGTTAVAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTT 315
                                       VAYNFGPNGRP NLSEWGIPVGNNHGSSCGTT
Sbjct: 53  --------------------------AGVAYNFGPNGRPSNLSEWGIPVGNNHGSSCGTT 86

Query: 314 GPGED 300
           GPGED
Sbjct: 87  GPGED 91


>ref|YP_004222255.1| hypothetical protein BevumaM_p016 [Beta vulgaris subsp. maritima]
           gi|346683133|ref|YP_004842062.1| hypothetical protein
           BemaM_p014 [Beta macrocarpa]
           gi|317905693|emb|CBX33235.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439773|emb|CBX33287.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148025|emb|CBJ20690.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500051|emb|CBX24867.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939217|emb|CBL52063.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 178

 Score =  108 bits (270), Expect = 2e-21
 Identities = 55/68 (80%), Positives = 57/68 (83%), Gaps = 3/68 (4%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTG---GSRSIWLTGNLLFPSSRDY 616
           SMDEVVVDPAITIKAIGHQWY SAPLHEG  SATKC      S+SIWLTGNL FPSSRD+
Sbjct: 109 SMDEVVVDPAITIKAIGHQWYRSAPLHEGDLSATKCLKVEYSSQSIWLTGNLPFPSSRDF 168

Query: 615 KNYSMPET 592
            NYSMPET
Sbjct: 169 SNYSMPET 176


>gb|AFW86910.1| putative cytochrome C oxidase subunit II family protein [Zea mays]
          Length = 70

 Score =  103 bits (256), Expect = 9e-20
 Identities = 50/53 (94%), Positives = 51/53 (96%)
 Frame = -2

Query: 457 MSDNGAEVVNLSAPQQWHTTLDLTAGPVTFRNGGSPLATTTVVVAELLGRERT 299
           MSDNGA VVNLSAPQQWHTTLDL AGPVTFRNGGSPLATTTVVVAELLG+ERT
Sbjct: 1   MSDNGASVVNLSAPQQWHTTLDLRAGPVTFRNGGSPLATTTVVVAELLGQERT 53


>tpg|DAA38268.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
           mays]
          Length = 354

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTGGSRSIWLTGNLLFPSSRD 619
           SMD V+VDPAITIKAIGHQWY SAPL+EG  SATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 299 SMDGVLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 354


>gb|AFW86920.1| LOW QUALITY PROTEIN: putative cytochrome C oxidase subunit II
           family protein [Zea mays]
          Length = 375

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTGGSRSIWLTGNLLFPSSRD 619
           SMD V+VDPAITIKAIGHQWY SAPL+EG  SATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 320 SMDGVLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 375


>gb|EHK62703.1| hypothetical protein M3S_K12 (mitochondrion) [Sorghum bicolor]
          Length = 131

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTGGSRSIWLTGNLLFPSSRD 619
           SMD V+VDPAITIKAIGHQWY SAPL+EG  SATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 76  SMDGVLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 131


>gb|EHK62687.1| hypothetical protein M3S_E08, partial (mitochondrion) [Sorghum
           bicolor]
          Length = 158

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTGGSRSIWLTGNLLFPSSRD 619
           SMD V+VDPAITIKAIGHQWY SAPL+EG  SATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 103 SMDGVLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 158


>gb|EHK62683.1| hypothetical protein M3S_J74 (mitochondrion) [Sorghum bicolor]
          Length = 163

 Score = 98.6 bits (244), Expect = 2e-18
 Identities = 48/56 (85%), Positives = 51/56 (91%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTGGSRSIWLTGNLLFPSSRD 619
           SMD V+VDPAITIKAIGHQWY SAPL+EG  SATKCTGGSRSIWLTG+L FPSSRD
Sbjct: 108 SMDGVLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTGGSRSIWLTGHLPFPSSRD 163


>tpg|DAA38266.1| TPA: putative cytochrome C oxidase subunit II family protein [Zea
           mays]
          Length = 510

 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 36/40 (90%), Positives = 36/40 (90%)
 Frame = -1

Query: 419 TTAVAYNFGPNGRPRNLSEWGIPVGNNHGSSCGTTGPGED 300
           T AVAYNFGP GRPR LSEWGIPVGNNHGSSCGTTGP ED
Sbjct: 357 TGAVAYNFGPKGRPRYLSEWGIPVGNNHGSSCGTTGPRED 396



 Score = 66.6 bits (161), Expect = 1e-08
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTG 673
           SMD V+VDPAITIKAIGHQWY SAPL+EG  SATKCTG
Sbjct: 321 SMDGVLVDPAITIKAIGHQWYRSAPLNEGDLSATKCTG 358


>ref|XP_006828094.1| hypothetical protein AMTR_s00151p00074930 [Amborella trichopoda]
           gi|548832740|gb|ERM95510.1| hypothetical protein
           AMTR_s00151p00074930 [Amborella trichopoda]
          Length = 160

 Score = 52.4 bits (124), Expect(2) = 2e-09
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = -1

Query: 374 NLSEWGIPVGNNHGSSCGTTGPGED 300
           +LS+WGIP+GNNHGSSC TTGPGE+
Sbjct: 87  DLSKWGIPIGNNHGSSCETTGPGEE 111



 Score = 37.0 bits (84), Expect(2) = 2e-09
 Identities = 18/21 (85%), Positives = 18/21 (85%)
 Frame = -3

Query: 255 PTVGNSRHKQLYRRGPALLLL 193
           PTV NSRHK L RRGPALLLL
Sbjct: 127 PTVCNSRHKALDRRGPALLLL 147


>tpg|DAA46810.1| TPA: hypothetical protein ZEAMMB73_014568 [Zea mays]
          Length = 380

 Score = 67.8 bits (164), Expect = 4e-09
 Identities = 34/43 (79%), Positives = 36/43 (83%)
 Frame = -3

Query: 786 SMDEVVVDPAITIKAIGHQWYWSAPLHEGY*SATKCTGGSRSI 658
           SMD V VD AITIKAIGHQWY SAPL++G  SATKC GGSRSI
Sbjct: 338 SMDGVFVDAAITIKAIGHQWYRSAPLNKGDLSATKCIGGSRSI 380


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