BLASTX nr result

ID: Sinomenium22_contig00034091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00034091
         (502 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD59438.1| Rps16 protein [Clivia gardenii]                        57   2e-06

>emb|CAD59438.1| Rps16 protein [Clivia gardenii]
          Length = 74

 Score = 57.0 bits (136), Expect(2) = 2e-06
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +2

Query: 212 VGFK*IVHDGARVERIDSFFRGKDLGLVSINKLEQLRKYIAN 337
           V  K IVHDGAR + IDSF  GK+LGLV+INKL+QL KYI N
Sbjct: 20  VNRKGIVHDGARTKSIDSFIGGKNLGLVTINKLDQLCKYILN 61



 Score = 20.8 bits (42), Expect(2) = 2e-06
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 166 SWLDIVCSVLFETLFC 213
           S +DIVCSV    L C
Sbjct: 1   SRIDIVCSVPARNLIC 16


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