BLASTX nr result
ID: Sinomenium22_contig00034036
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00034036
(1512 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedice... 672 0.0
gb|AHE41634.1| RNA polymerase beta' subunit protein, partial (ch... 653 0.0
ref|XP_004174097.1| PREDICTED: DNA-directed RNA polymerase subun... 651 0.0
prf||1211235Q rpoC-like ORF 548 650 0.0
gb|AHE41636.1| RNA polymerase beta' subunit protein, partial (ch... 649 0.0
ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subun... 648 0.0
gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (ch... 648 0.0
ref|YP_008592837.1| DNA-directed RNA polymerase beta' subunit (c... 647 0.0
gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (ch... 647 0.0
gb|AHE41644.1| RNA polymerase beta' subunit protein, partial (ch... 646 0.0
ref|YP_008592924.1| DNA-directed RNA polymerase beta' subunit (c... 646 0.0
gb|ADD31165.1| RNA polymerase beta' subunit protein [Ilex cornuta] 646 0.0
gb|AHE41637.1| RNA polymerase beta' subunit protein, partial (ch... 646 0.0
ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (c... 645 0.0
ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (c... 645 0.0
ref|YP_008963471.1| RNA polymerase beta (chloroplast) [Penthorum... 644 0.0
ref|YP_008520130.1| DNA-directed RNA polymerase beta' subunit (c... 644 0.0
gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (ch... 642 0.0
gb|AHE41638.1| RNA polymerase beta' subunit protein, partial (ch... 642 0.0
gb|AHM91213.1| RNA polymerase beta, partial (chloroplast) [Lagen... 641 0.0
>gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedicellaris]
Length = 718
Score = 672 bits (1735), Expect = 0.0
Identities = 336/391 (85%), Positives = 354/391 (90%)
Frame = -2
Query: 1175 FV*CNYLSRMRGNLHVRF*RGGNPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYS 996
F+ C YLSRM+GN+HVRF RGG PI +YPNFSFARP+ KKPTFLRLRGLFEYEIQSWKYS
Sbjct: 153 FIWCTYLSRMKGNIHVRFRRGGAPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYS 212
Query: 995 IPLFFTTQGFDTFRNREIATGASAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWED 816
IPLFFTTQGFDTFRNREI+TGA AIREQLADLDLR++I+ SL+EWK+LGEE TGNEWED
Sbjct: 213 IPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRIVIENSLLEWKDLGEEEHTGNEWED 272
Query: 815 RKIGRRKDFLVRRMELAKHFIRTNVEPERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINE 636
RK+GRRKDFLVRRMELAKHF+RTN+EPE MV PIIQIDGGKLMSSDINE
Sbjct: 273 RKVGRRKDFLVRRMELAKHFLRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINE 332
Query: 635 LYRRVIYXXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK 456
LYRRVIY TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK
Sbjct: 333 LYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYK 392
Query: 455 SFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLNRCGLPREIAIELFQTFVIRGL 276
SFSD+IEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSL+RCGLPREIAIELFQTFVIRGL
Sbjct: 393 SFSDLIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGL 452
Query: 275 IRQHVASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGR 96
IRQH+ASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGR
Sbjct: 453 IRQHLASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGR 512
Query: 95 AICLHPLVCKGFNADFDGDQMAVHVPLSLEA 3
AICLHPLVCKGFNADFDGDQMAVHVPLSLEA
Sbjct: 513 AICLHPLVCKGFNADFDGDQMAVHVPLSLEA 543
>gb|AHE41634.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Hamamelis mollis]
Length = 639
Score = 653 bits (1684), Expect = 0.0
Identities = 329/364 (90%), Positives = 337/364 (92%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA+AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAAAIRE 183
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 304 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 363
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 364 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEIL 423
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 424 QEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 483
Query: 14 SLEA 3
SLEA
Sbjct: 484 SLEA 487
>ref|XP_004174097.1| PREDICTED: DNA-directed RNA polymerase subunit beta'-like, partial
[Cucumis sativus]
Length = 471
Score = 651 bits (1679), Expect = 0.0
Identities = 329/369 (89%), Positives = 337/369 (91%)
Frame = -2
Query: 1109 NPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGA 930
+PI +YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA
Sbjct: 3 DPIVSYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGA 62
Query: 929 SAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIR 750
AIREQLADLDLRLIIDYSLVEWKELGEEGP GNEWEDRK+GRRKDFLVRRMELAKHFIR
Sbjct: 63 GAIREQLADLDLRLIIDYSLVEWKELGEEGPAGNEWEDRKVGRRKDFLVRRMELAKHFIR 122
Query: 749 TNVEPERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXT 570
TN+EPE MV PIIQIDGGKLMSSDINELYRRVIY T
Sbjct: 123 TNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLIDLLTTSRST 182
Query: 569 PGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRV 390
PGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRV
Sbjct: 183 PGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRV 242
Query: 389 DYSGRSVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPI 210
DYSGRSVIVVGPSLSL+RCGLPREIAIELFQTF+IRGLIRQH ASNIGVAKSKIREKEPI
Sbjct: 243 DYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFASNIGVAKSKIREKEPI 302
Query: 209 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 30
VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA
Sbjct: 303 VWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMA 362
Query: 29 VHVPLSLEA 3
VHVPLSLEA
Sbjct: 363 VHVPLSLEA 371
>prf||1211235Q rpoC-like ORF 548
Length = 548
Score = 650 bits (1676), Expect = 0.0
Identities = 327/372 (87%), Positives = 340/372 (91%)
Frame = -2
Query: 1118 RGGNPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIA 939
RGG+PI +YPNFSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+
Sbjct: 1 RGGDPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIS 60
Query: 938 TGASAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKH 759
TGA AIREQLADLDLR+II+ SLVEW+ELGEEG TGNEWEDRK+GRRKDFLVRR+ELAKH
Sbjct: 61 TGAGAIREQLADLDLRIIIENSLVEWEELGEEGHTGNEWEDRKVGRRKDFLVRRVELAKH 120
Query: 758 FIRTNVEPERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXX 579
FIRTN+EPE MV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 121 FIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTS 180
Query: 578 XXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLG 399
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLG
Sbjct: 181 RSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLG 240
Query: 398 KRVDYSGRSVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREK 219
KRVDYSGRSVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREK
Sbjct: 241 KRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 300
Query: 218 EPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGD 39
EPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGD
Sbjct: 301 EPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGD 360
Query: 38 QMAVHVPLSLEA 3
QMAVHVPLSLEA
Sbjct: 361 QMAVHVPLSLEA 372
>gb|AHE41636.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Saxifraga stolonifera]
Length = 639
Score = 649 bits (1675), Expect = 0.0
Identities = 328/364 (90%), Positives = 335/364 (92%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
Y NFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YRNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLNDLLTTSRSTPGELV 303
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKL+QEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 304 MCQEKLIQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 363
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 364 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEIL 423
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 424 QEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 483
Query: 14 SLEA 3
SLEA
Sbjct: 484 SLEA 487
>ref|XP_006360368.1| PREDICTED: DNA-directed RNA polymerase subunit beta'-like [Solanum
tuberosum]
Length = 581
Score = 648 bits (1672), Expect = 0.0
Identities = 326/372 (87%), Positives = 340/372 (91%)
Frame = -2
Query: 1118 RGGNPIGTYPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIA 939
+GG+PI +YPNFSFARP+ KKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+
Sbjct: 34 QGGDPIESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIS 93
Query: 938 TGASAIREQLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKH 759
TGA AIREQLADLDLR+II+ SLVEW+ELGEEG TGNEWEDRK+GRRKDFLVRR+ELAKH
Sbjct: 94 TGAGAIREQLADLDLRIIIENSLVEWEELGEEGHTGNEWEDRKVGRRKDFLVRRVELAKH 153
Query: 758 FIRTNVEPERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXX 579
FIRTN+EPE MV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 154 FIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTS 213
Query: 578 XXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLG 399
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLG
Sbjct: 214 RSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLG 273
Query: 398 KRVDYSGRSVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREK 219
KRVDYSGRSVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREK
Sbjct: 274 KRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREK 333
Query: 218 EPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGD 39
EPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGD
Sbjct: 334 EPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGD 393
Query: 38 QMAVHVPLSLEA 3
QMAVHVPLSLEA
Sbjct: 394 QMAVHVPLSLEA 405
>gb|AHE41641.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Disanthus cercidifolius subsp. longipes]
Length = 621
Score = 648 bits (1671), Expect = 0.0
Identities = 328/364 (90%), Positives = 335/364 (92%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 108 YPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 167
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 168 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 227
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 228 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 287
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 288 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 347
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 348 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEIL 407
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLV KGFNADFDGDQMAVHVPL
Sbjct: 408 QEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFNADFDGDQMAVHVPL 467
Query: 14 SLEA 3
SLEA
Sbjct: 468 SLEA 471
>ref|YP_008592837.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
danzaiensis] gi|552546184|ref|YP_008593013.1|
DNA-directed RNA polymerase beta' subunit (chloroplast)
[Camellia pitardii] gi|537362497|gb|AGU44304.1|
DNA-directed RNA polymerase beta' subunit (chloroplast)
[Camellia danzaiensis] gi|537362765|gb|AGU44569.1|
DNA-directed RNA polymerase beta' subunit (chloroplast)
[Camellia pitardii]
Length = 686
Score = 647 bits (1670), Expect = 0.0
Identities = 326/364 (89%), Positives = 334/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 326 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 385
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 386 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEIL 445
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQPIL+EGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 446 QEVMQGHPVLLNRAPTLHRLGIQAFQPILMEGRAICLHPLVCKGFNADFDGDQMAVHVPL 505
Query: 14 SLEA 3
SLEA
Sbjct: 506 SLEA 509
>gb|AHE41649.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Rhodoleia championii]
Length = 639
Score = 647 bits (1669), Expect = 0.0
Identities = 328/364 (90%), Positives = 335/364 (92%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGASAIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGASAIRE 183
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 304 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 363
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 364 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEIL 423
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLV KGFNADFDGDQMAVHVPL
Sbjct: 424 QEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFNADFDGDQMAVHVPL 483
Query: 14 SLEA 3
SLEA
Sbjct: 484 SLEA 487
>gb|AHE41644.1| RNA polymerase beta' subunit protein, partial (chloroplast) [Gunnera
manicata]
Length = 637
Score = 646 bits (1667), Expect = 0.0
Identities = 329/364 (90%), Positives = 334/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QL+DLDLR+IIDYSLVEWKELGEEG TGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP
Sbjct: 184 QLSDLDLRIIIDYSLVEWKELGEEGTTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 243
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
ERMV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 244 ERMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 304 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 363
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL
Sbjct: 364 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 423
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLV KGFNADFDGDQMAVHVPL
Sbjct: 424 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVRKGFNADFDGDQMAVHVPL 483
Query: 14 SLEA 3
SLEA
Sbjct: 484 SLEA 487
>ref|YP_008592924.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
impressinervis] gi|537362585|gb|AGU44391.1| DNA-directed
RNA polymerase beta' subunit (chloroplast) [Camellia
impressinervis]
Length = 686
Score = 646 bits (1667), Expect = 0.0
Identities = 325/364 (89%), Positives = 334/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTNLLTTSRSTPGELV 325
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 326 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 385
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWE+L
Sbjct: 386 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEML 445
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQPIL+EGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 446 QEVMQGHPVLLNRAPTLHRLGIQAFQPILMEGRAICLHPLVCKGFNADFDGDQMAVHVPL 505
Query: 14 SLEA 3
SLEA
Sbjct: 506 SLEA 509
>gb|ADD31165.1| RNA polymerase beta' subunit protein [Ilex cornuta]
Length = 694
Score = 646 bits (1667), Expect = 0.0
Identities = 325/363 (89%), Positives = 335/363 (92%)
Frame = -2
Query: 1091 PNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIREQ 912
PNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIREQ
Sbjct: 152 PNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQ 211
Query: 911 LADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPE 732
LADLDLR+IIDYSLVEWKELGEEG TGNEWEDRK+GRRKDFLVRRMELAKHFIRTN+EPE
Sbjct: 212 LADLDLRIIIDYSLVEWKELGEEGFTGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEPE 271
Query: 731 RMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELVM 552
RMV PIIQIDGGKLMSSDINELYRRVIY TPGELVM
Sbjct: 272 RMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVM 331
Query: 551 CQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRS 372
CQEKLVQEAVDTLLDNGIRGQPMRDGHNK+YKSFSDVIEGKEGRFRETLLGKRVDYSGRS
Sbjct: 332 CQEKLVQEAVDTLLDNGIRGQPMRDGHNKIYKSFSDVIEGKEGRFRETLLGKRVDYSGRS 391
Query: 371 VIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEILQ 192
VIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEP+VWEILQ
Sbjct: 392 VIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPLVWEILQ 451
Query: 191 EVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPLS 12
+VMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPLS
Sbjct: 452 DVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLS 511
Query: 11 LEA 3
LEA
Sbjct: 512 LEA 514
>gb|AHE41637.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Daphniphyllum oldhamii]
Length = 639
Score = 646 bits (1666), Expect = 0.0
Identities = 325/364 (89%), Positives = 333/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTT GFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTPGFDTFRNREISTGAGAIRE 183
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 244 EWMVLGLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRET+LGKRVDYSGR
Sbjct: 304 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSGR 363
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 364 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHIASNIGVAKSKIREKEPIVWEIL 423
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
EVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 424 HEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 483
Query: 14 SLEA 3
SLEA
Sbjct: 484 SLEA 487
>ref|YP_008593102.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
yunnanensis] gi|537362855|gb|AGU44658.1| DNA-directed RNA
polymerase beta' subunit (chloroplast) [Camellia
yunnanensis]
Length = 686
Score = 645 bits (1663), Expect = 0.0
Identities = 324/364 (89%), Positives = 334/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
+ MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 266 KWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 326 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 385
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWE+L
Sbjct: 386 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEML 445
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQPIL+EGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 446 QEVMQGHPVLLNRAPTLHRLGIQAFQPILMEGRAICLHPLVCKGFNADFDGDQMAVHVPL 505
Query: 14 SLEA 3
SLEA
Sbjct: 506 SLEA 509
>ref|YP_008592748.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
cuspidata] gi|537362407|gb|AGU44215.1| DNA-directed RNA
polymerase beta' subunit (chloroplast) [Camellia
cuspidata]
Length = 686
Score = 645 bits (1663), Expect = 0.0
Identities = 324/364 (89%), Positives = 334/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 326 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 385
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKS+IREKEPIVWE+L
Sbjct: 386 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSQIREKEPIVWEML 445
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQPIL+EGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 446 QEVMQGHPVLLNRAPTLHRLGIQAFQPILMEGRAICLHPLVCKGFNADFDGDQMAVHVPL 505
Query: 14 SLEA 3
SLEA
Sbjct: 506 SLEA 509
>ref|YP_008963471.1| RNA polymerase beta (chloroplast) [Penthorum chinense]
gi|403226772|gb|AFR25651.1| RNA polymerase beta
(chloroplast) [Penthorum chinense]
Length = 686
Score = 644 bits (1662), Expect = 0.0
Identities = 325/364 (89%), Positives = 333/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 205
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QL+DLDLRLIIDYSLVEWKELGEEG GNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLSDLDLRLIIDYSLVEWKELGEEGTAGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRET+LGKRVDYSGR
Sbjct: 326 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETMLGKRVDYSGR 385
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIR H+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 386 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRHHLASNIGVAKSKIREKEPIVWEIL 445
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 446 QEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 505
Query: 14 SLEA 3
SLEA
Sbjct: 506 SLEA 509
>ref|YP_008520130.1| DNA-directed RNA polymerase beta' subunit (chloroplast) [Camellia
taliensis] gi|537362675|gb|AGU44480.1| DNA-directed RNA
polymerase beta' subunit (chloroplast) [Camellia
taliensis] gi|537362945|gb|AGU44747.1| DNA-directed RNA
polymerase beta' subunit (chloroplast) [Camellia
taliensis]
Length = 686
Score = 644 bits (1662), Expect = 0.0
Identities = 324/364 (89%), Positives = 333/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNRE++TGA IRE
Sbjct: 146 YPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREVSTGAGTIRE 205
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGP GNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 206 QLADLDLRIIIDYSLVEWKELGEEGPAGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 265
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 266 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 325
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 326 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 385
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWE+L
Sbjct: 386 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEML 445
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQPIL+EGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 446 QEVMQGHPVLLNRAPTLHRLGIQAFQPILMEGRAICLHPLVCKGFNADFDGDQMAVHVPL 505
Query: 14 SLEA 3
SLEA
Sbjct: 506 SLEA 509
>gb|AHE41652.1| RNA polymerase beta' subunit protein, partial (chloroplast) [Paeonia
obovata]
Length = 639
Score = 642 bits (1655), Expect = 0.0
Identities = 326/364 (89%), Positives = 332/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARPVAKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEE TGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEERTTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 244 EWMVLGLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELV 303
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 304 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 363
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIR LIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 364 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRDLIRQHLASNIGVAKSKIREKEPIVWEIL 423
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 424 QEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 483
Query: 14 SLEA 3
SLEA
Sbjct: 484 SLEA 487
>gb|AHE41638.1| RNA polymerase beta' subunit protein, partial (chloroplast) [Itea
chinensis]
Length = 639
Score = 642 bits (1655), Expect = 0.0
Identities = 325/364 (89%), Positives = 333/364 (91%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
YPNFSFARP+AKKPTFLRLRGLFEYEI SWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 124 YPNFSFARPIAKKPTFLRLRGLFEYEIPSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 183
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLR+IIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 184 QLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNIEP 243
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 244 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLKDLLTTSRSTPGELV 303
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQP RDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 304 MCQEKLVQEAVDTLLDNGIRGQPTRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 363
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTFVIRGLIRQH+ASNIGVAKSKIREKEPIVWEIL
Sbjct: 364 SVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEIL 423
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEV+QGHPVLLNRAPTLHRLGIQAFQP+LVEGRAICLHPLV KGFNADFDGDQMAVHVPL
Sbjct: 424 QEVIQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVRKGFNADFDGDQMAVHVPL 483
Query: 14 SLEA 3
SLEA
Sbjct: 484 SLEA 487
>gb|AHM91213.1| RNA polymerase beta, partial (chloroplast) [Lagenaria siceraria]
Length = 675
Score = 641 bits (1654), Expect = 0.0
Identities = 328/364 (90%), Positives = 335/364 (92%)
Frame = -2
Query: 1094 YPNFSFARPVAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREIATGASAIRE 915
Y +FSFARP+AKKPTFLRLRG FEYEIQSWKYSIPLFFTTQGFDTFRNREI+TGA AIRE
Sbjct: 137 YCDFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIRE 196
Query: 914 QLADLDLRLIIDYSLVEWKELGEEGPTGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEP 735
QLADLDLRLIIDYSLVEWKELGEEGP GNEWEDRK+GRRKDFLVRRMELAKHFIRTN+EP
Sbjct: 197 QLADLDLRLIIDYSLVEWKELGEEGPAGNEWEDRKVGRRKDFLVRRMELAKHFIRTNIEP 256
Query: 734 ERMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIYXXXXXXXXXXXXXXTPGELV 555
E MV PIIQIDGGKLMSSDINELYRRVIY TPGELV
Sbjct: 257 EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRXXXLIDLLTTSRSTPGELV 316
Query: 554 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 375
MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR
Sbjct: 317 MCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGR 376
Query: 374 SVIVVGPSLSLNRCGLPREIAIELFQTFVIRGLIRQHVASNIGVAKSKIREKEPIVWEIL 195
SVIVVGPSLSL+RCGLPREIAIELFQTF+IRGLIRQH ASNIGVAKSKIREKEPIVWEIL
Sbjct: 377 SVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQHFASNIGVAKSKIREKEPIVWEIL 436
Query: 194 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 15
QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL
Sbjct: 437 QEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAICLHPLVCKGFNADFDGDQMAVHVPL 496
Query: 14 SLEA 3
SLEA
Sbjct: 497 SLEA 500