BLASTX nr result
ID: Sinomenium22_contig00033970
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00033970
(316 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007220282.1| hypothetical protein PRUPE_ppa000731mg [Prun... 92 1e-16
gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis] 84 2e-14
ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citr... 83 3e-14
ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|2235... 82 1e-13
ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max] 80 3e-13
ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera... 80 3e-13
gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis] 78 1e-12
ref|XP_007132045.1| hypothetical protein PHAVU_011G062300g [Phas... 78 1e-12
ref|XP_007132044.1| hypothetical protein PHAVU_011G062200g [Phas... 78 1e-12
ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing fa... 78 1e-12
ref|XP_007208120.1| hypothetical protein PRUPE_ppa000627mg [Prun... 78 1e-12
ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homo... 77 2e-12
ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis s... 77 2e-12
ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula] g... 77 2e-12
ref|XP_006592187.1| PREDICTED: pumilio homolog 2-like isoform X3... 77 2e-12
ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like isoform X1... 77 2e-12
ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria ... 77 3e-12
ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2... 76 4e-12
ref|XP_006590979.1| PREDICTED: pumilio homolog 2-like isoform X2... 76 4e-12
ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis s... 76 4e-12
>ref|XP_007220282.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
gi|462416744|gb|EMJ21481.1| hypothetical protein
PRUPE_ppa000731mg [Prunus persica]
Length = 1021
Score = 91.7 bits (226), Expect = 1e-16
Identities = 56/101 (55%), Positives = 68/101 (67%)
Frame = +2
Query: 14 MGTESPLQMLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIF 193
M T S + MLS D + L+ G+LED L E+EL+LREQ+ + + RE+DLNI+
Sbjct: 1 MATGSNIDMLSTLD------NNLQRPNGNLEDALQSELELILREQRNQHAIHRERDLNIY 54
Query: 194 RSGSAPPTVEGSLTAVGSLFQNSEDHFSGINRNWNANGVLS 316
RSGSAPPTVEGSLTAVGSLF NS D +R N NGVLS
Sbjct: 55 RSGSAPPTVEGSLTAVGSLFGNS-DFRDVTSRISNNNGVLS 94
>gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis]
Length = 989
Score = 84.0 bits (206), Expect = 2e-14
Identities = 44/74 (59%), Positives = 54/74 (72%)
Frame = +2
Query: 95 GDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSLFQNSEDHF 274
G LED+L EIE +LRE + + +M+RE+DLNI+RSGSAPPTVEGSL+AVGSLF NS+
Sbjct: 5 GSLEDSLQTEIESILREHRNQSVMDRERDLNIYRSGSAPPTVEGSLSAVGSLFGNSDVKE 64
Query: 275 SGINRNWNANGVLS 316
N NG LS
Sbjct: 65 INTNSRGFNNGGLS 78
>ref|XP_006436466.1| hypothetical protein CICLE_v10030594mg [Citrus clementina]
gi|567887890|ref|XP_006436467.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|568864458|ref|XP_006485615.1| PREDICTED: pumilio
homolog 4-like isoform X1 [Citrus sinensis]
gi|568864460|ref|XP_006485616.1| PREDICTED: pumilio
homolog 4-like isoform X2 [Citrus sinensis]
gi|568864462|ref|XP_006485617.1| PREDICTED: pumilio
homolog 4-like isoform X3 [Citrus sinensis]
gi|557538662|gb|ESR49706.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
gi|557538663|gb|ESR49707.1| hypothetical protein
CICLE_v10030594mg [Citrus clementina]
Length = 1029
Score = 83.2 bits (204), Expect = 3e-14
Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 8/99 (8%)
Frame = +2
Query: 44 SDPDVRPNQGDGLRGSEGDL--EDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
S+ ++ PN DGL G G+L ED+L E+EL+L+ Q + I+ RE+D+NI+RSGSAPPT
Sbjct: 5 SNIEMLPNLEDGLGGQNGNLSLEDSLQTELELILQRQPDRQIVNRERDVNIYRSGSAPPT 64
Query: 218 VEGSLTAVGSLFQNS------EDHFSGINRNWNANGVLS 316
VEGSL AVGSLF G N + NG+LS
Sbjct: 65 VEGSLNAVGSLFLRDNPGSICNTAAGGSGGNGDINGILS 103
>ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|223529499|gb|EEF31455.1|
pumilio, putative [Ricinus communis]
Length = 1024
Score = 81.6 bits (200), Expect = 1e-13
Identities = 44/92 (47%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Frame = +2
Query: 44 SDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVE 223
S+ D+ + D L+ G+LED+ E+E++L+ Q+ + ++RE+DLNI+RSGSAPPTVE
Sbjct: 5 SNIDMLLSLDDHLQRPNGNLEDSFQSELEMILQAQRNQHYIDRERDLNIYRSGSAPPTVE 64
Query: 224 GSLTAVGSLFQNSE-DHFSGINRNWNANGVLS 316
GSL+AVGSLF+N S I+ + +N VLS
Sbjct: 65 GSLSAVGSLFRNPNFSDVSSISNSSRSNTVLS 96
>ref|XP_003547219.1| PREDICTED: pumilio homolog 2-like [Glycine max]
Length = 1054
Score = 80.1 bits (196), Expect = 3e-13
Identities = 40/72 (55%), Positives = 55/72 (76%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G G+EG D L +EI ++LREQ+R+++ +RE++LN++RSGSAPPT
Sbjct: 1 MLSELGTRPMLG----GNEGSFGDELEKEIGMLLREQRRQEVDDRERELNLYRSGSAPPT 56
Query: 218 VEGSLTAVGSLF 253
VEGSL+AVG LF
Sbjct: 57 VEGSLSAVGGLF 68
>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
gi|296085990|emb|CBI31431.3| unnamed protein product
[Vitis vinifera]
Length = 1026
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/93 (46%), Positives = 67/93 (72%), Gaps = 2/93 (2%)
Frame = +2
Query: 44 SDPDVRPNQGDGLRGSEGDLED-NLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTV 220
S+ D+R + +G +G++ D +L E++ MLREQ+ + +++R +DLNIFRSGSAPPTV
Sbjct: 5 SNTDMRTSLNEGQSLVDGNIGDYSLHDELQAMLREQRNRGLVDRGRDLNIFRSGSAPPTV 64
Query: 221 EGSLTAVGSLFQNSE-DHFSGINRNWNANGVLS 316
EGSL+AVG LF+N++ + + + N NGVL+
Sbjct: 65 EGSLSAVGGLFRNADVNEINHRSSNKTTNGVLT 97
>gb|EXC10703.1| Pumilio-2-like protein [Morus notabilis]
Length = 1062
Score = 78.2 bits (191), Expect = 1e-12
Identities = 46/93 (49%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G G+EG D +EI L+LREQ+R+D+ +RE++LN+ RSGSAPPT
Sbjct: 1 MLSELGRRPMLG----GNEGSFGDEFEKEIGLLLREQRRQDVDDRERELNMCRSGSAPPT 56
Query: 218 VEGSLTAVGSLFQN------SEDHFSGINRNWN 298
VEGSL+AVG LF S F+G N N
Sbjct: 57 VEGSLSAVGGLFGGGGAGAASFAEFAGAQNNGN 89
>ref|XP_007132045.1| hypothetical protein PHAVU_011G062300g [Phaseolus vulgaris]
gi|561005045|gb|ESW04039.1| hypothetical protein
PHAVU_011G062300g [Phaseolus vulgaris]
Length = 1047
Score = 78.2 bits (191), Expect = 1e-12
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 6/99 (6%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ + RP G +EG D L +EI ++LREQ+R++ +RE++LNIFRSGSAPPT
Sbjct: 1 MLSEFERRPMIGS----NEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPT 56
Query: 218 VEGSLTAVGSLF------QNSEDHFSGINRNWNANGVLS 316
VEGSL+AVG LF + FS + NG+ S
Sbjct: 57 VEGSLSAVGGLFGGGGGAAGASGAFSEFQGTKDVNGIAS 95
>ref|XP_007132044.1| hypothetical protein PHAVU_011G062200g [Phaseolus vulgaris]
gi|561005044|gb|ESW04038.1| hypothetical protein
PHAVU_011G062200g [Phaseolus vulgaris]
Length = 1050
Score = 78.2 bits (191), Expect = 1e-12
Identities = 41/72 (56%), Positives = 54/72 (75%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ + RP G +EG D L +EI ++LREQ+R++ +RE++LNIFRSGSAPPT
Sbjct: 1 MLSELERRPMLGS----NEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPT 56
Query: 218 VEGSLTAVGSLF 253
VEGSL+AVG LF
Sbjct: 57 VEGSLSAVGGLF 68
>ref|XP_002299859.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550348126|gb|EEE84664.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1065
Score = 77.8 bits (190), Expect = 1e-12
Identities = 47/96 (48%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G ++G D+L +EI L+LREQ+R++ +REK+LN++RSGSAPPT
Sbjct: 1 MLSELGRRPMIG----ANDGSFGDDLEKEIGLLLREQRRQEADDREKELNLYRSGSAPPT 56
Query: 218 VEGSLTAVGSLF---QNSEDHFSGINRNWNANGVLS 316
VEGSL AVG LF N FS N NG S
Sbjct: 57 VEGSLNAVGGLFGGGGNGGASFSDFIGGKNGNGFTS 92
>ref|XP_007208120.1| hypothetical protein PRUPE_ppa000627mg [Prunus persica]
gi|462403762|gb|EMJ09319.1| hypothetical protein
PRUPE_ppa000627mg [Prunus persica]
Length = 1062
Score = 77.8 bits (190), Expect = 1e-12
Identities = 41/72 (56%), Positives = 52/72 (72%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP L G+EG D +EI ++LREQ+R+++ +RE +LNIFRSGSAPPT
Sbjct: 1 MLSEIGRRPM----LAGNEGSFGDEFEKEIGMLLREQRRQEVDDRESELNIFRSGSAPPT 56
Query: 218 VEGSLTAVGSLF 253
VEGSL AVG LF
Sbjct: 57 VEGSLNAVGGLF 68
>ref|XP_004160189.1| PREDICTED: LOW QUALITY PROTEIN: pumilio homolog 1-like [Cucumis
sativus]
Length = 1043
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Frame = +2
Query: 86 GSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSL---FQ 256
G+EG D L EI L+LREQ+R++ +RE++LN++RSGSAPPTVEGSL+AVG L
Sbjct: 4 GNEGSFGDELETEIGLLLREQRRQEADDRERELNLYRSGSAPPTVEGSLSAVGGLVGGIA 63
Query: 257 NSEDHFSGINRNWNANGVLS 316
S + F+ I + N NG +S
Sbjct: 64 GSANAFAEITGSKNGNGFVS 83
>ref|XP_004143128.1| PREDICTED: pumilio homolog 1-like [Cucumis sativus]
Length = 1043
Score = 77.4 bits (189), Expect = 2e-12
Identities = 41/80 (51%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
Frame = +2
Query: 86 GSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVEGSLTAVGSL---FQ 256
G+EG D L EI L+LREQ+R++ +RE++LN++RSGSAPPTVEGSL+AVG L
Sbjct: 4 GNEGSFGDELETEIGLLLREQRRQEADDRERELNLYRSGSAPPTVEGSLSAVGGLVGGIA 63
Query: 257 NSEDHFSGINRNWNANGVLS 316
S + F+ I + N NG +S
Sbjct: 64 GSANAFAEITGSKNGNGFVS 83
>ref|XP_003606712.1| Pumilio-like protein [Medicago truncatula]
gi|355507767|gb|AES88909.1| Pumilio-like protein
[Medicago truncatula]
Length = 1025
Score = 77.4 bits (189), Expect = 2e-12
Identities = 48/95 (50%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G+ +EG D L +EI ++LREQ+R++ +RE++LNIFRSGSAPPT
Sbjct: 1 MLSELGRRPVIGN----NEGCFGDELEKEIGMLLREQRRQEGDDRERELNIFRSGSAPPT 56
Query: 218 VEGSLTAVGSLF--QNSEDHFSGINRNWNANGVLS 316
VEGSL AVG LF FS N + NGV+S
Sbjct: 57 VEGSLNAVGGLFGAGGVAGGFSDFPGNKDVNGVVS 91
>ref|XP_006592187.1| PREDICTED: pumilio homolog 2-like isoform X3 [Glycine max]
Length = 926
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G +EG D L +EI ++LREQ+R++ +RE++LNIFRSGSAPPT
Sbjct: 1 MLSELGRRPMLGS----NEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPT 56
Query: 218 VEGSLTAVGSLF 253
VEGSL+AVG LF
Sbjct: 57 VEGSLSAVGGLF 68
>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like isoform X1 [Glycine max]
gi|571492295|ref|XP_006592186.1| PREDICTED: pumilio
homolog 2-like isoform X2 [Glycine max]
Length = 1053
Score = 77.0 bits (188), Expect = 2e-12
Identities = 41/72 (56%), Positives = 53/72 (73%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G +EG D L +EI ++LREQ+R++ +RE++LNIFRSGSAPPT
Sbjct: 1 MLSELGRRPMLGS----NEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPT 56
Query: 218 VEGSLTAVGSLF 253
VEGSL+AVG LF
Sbjct: 57 VEGSLSAVGGLF 68
>ref|XP_004294652.1| PREDICTED: pumilio homolog 2-like [Fragaria vesca subsp. vesca]
Length = 1077
Score = 76.6 bits (187), Expect = 3e-12
Identities = 40/72 (55%), Positives = 51/72 (70%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G G+EG D +EI ++LR+Q+R++ +RE DLNI+RSGSAPPT
Sbjct: 1 MLSELGRRPMLG----GNEGSFGDEFEKEISMLLRDQRRQEADDRESDLNIYRSGSAPPT 56
Query: 218 VEGSLTAVGSLF 253
VEGSL AVG LF
Sbjct: 57 VEGSLNAVGGLF 68
>ref|XP_006592185.1| PREDICTED: pumilio homolog 2-like isoform X2 [Glycine max]
Length = 902
Score = 76.3 bits (186), Expect = 4e-12
Identities = 45/98 (45%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ RP G +EG D L +EI ++LREQ+R++ +RE++LNIFRSGSAPPT
Sbjct: 1 MLSELGRRPMLGS----NEGSFGDELEKEIGMLLREQRRQEADDRERELNIFRSGSAPPT 56
Query: 218 VEGSLTAVGSLFQ-----NSEDHFSGINRNWNANGVLS 316
V+GSL+AVG LF + FS + NG+ S
Sbjct: 57 VDGSLSAVGGLFAGGGGGGAPAAFSEFRGTKDVNGIAS 94
>ref|XP_006590979.1| PREDICTED: pumilio homolog 2-like isoform X2 [Glycine max]
Length = 1031
Score = 76.3 bits (186), Expect = 4e-12
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Frame = +2
Query: 38 MLSDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPT 217
MLS+ + RP G +EG D L +E+ ++LREQ+R++ +RE++LNI+RSGSAPPT
Sbjct: 1 MLSELERRPMLGS----NEGSFGDELEKELGMLLREQRRQEADDREQELNIYRSGSAPPT 56
Query: 218 VEGSLTAVGSLFQNSED---HFSGINRNWNANGVLS 316
VEGSL+AVG LF + FSG + N + S
Sbjct: 57 VEGSLSAVGGLFGGAAGAPVAFSGFQGTKDVNLIAS 92
>ref|XP_004157558.1| PREDICTED: pumilio homolog 4-like [Cucumis sativus]
Length = 997
Score = 76.3 bits (186), Expect = 4e-12
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Frame = +2
Query: 44 SDPDVRPNQGDGLRGSEGDLEDNLGREIELMLREQQRKDIMEREKDLNIFRSGSAPPTVE 223
S+ D+ +G + G+ EDNL E+EL+LRE + R DLNI+RSGSAPPTVE
Sbjct: 5 SNTDMLSIPNEGHQVPAGNFEDNLRTELELLLRENSNHSVAGRGGDLNIYRSGSAPPTVE 64
Query: 224 GSLTAVGSLFQNSEDHFSGINRNWNAN-GVLS 316
GS+ AVGSLF +S +++ N +N GVLS
Sbjct: 65 GSINAVGSLFTSS--YYNEFNTKSGSNDGVLS 94