BLASTX nr result
ID: Sinomenium22_contig00033875
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00033875
(458 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007038473.1| Cleavage and polyadenylation specificity fac... 139 3e-31
emb|CBI24510.3| unnamed protein product [Vitis vinifera] 130 1e-28
ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation spec... 130 1e-28
ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation spec... 125 5e-27
ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prun... 125 5e-27
gb|EXC20897.1| Cleavage and polyadenylation specificity factor s... 125 6e-27
ref|XP_002510905.1| cleavage and polyadenylation specificity fac... 125 8e-27
ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation spec... 122 7e-26
ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation spec... 122 7e-26
ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citr... 122 7e-26
ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citr... 122 7e-26
ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutr... 119 4e-25
ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arab... 116 3e-24
ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation spec... 113 3e-23
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec... 113 3e-23
dbj|BAB11613.1| cleavage and polyadenylation specificity factor ... 112 4e-23
ref|NP_199979.2| cleavage and polyadenylation specificity factor... 112 4e-23
gb|AAN41460.1| putative cleavage and polyadenylation specificity... 112 4e-23
gb|EYU19493.1| hypothetical protein MIMGU_mgv1a000203mg [Mimulus... 108 6e-22
ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [A... 108 8e-22
>ref|XP_007038473.1| Cleavage and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao] gi|508775718|gb|EOY22974.1| Cleavage
and polyadenylation specificity factor 160 isoform 1
[Theobroma cacao]
Length = 1457
Score = 139 bits (351), Expect = 3e-31
Identities = 60/76 (78%), Positives = 70/76 (92%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MSYAA+KMMHWPTGIENCASGF+THC ADF PQIP ++DLE+EWPAR+GIGP+PNL+V
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHCRADFTPQIPLNQTEDLESEWPARRGIGPVPNLIV 60
Query: 409 TAGNILEVYVVRVQEE 456
TA N+LE+YVVRVQEE
Sbjct: 61 TAANLLEIYVVRVQEE 76
>emb|CBI24510.3| unnamed protein product [Vitis vinifera]
Length = 1448
Score = 130 bits (328), Expect = 1e-28
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MSYAA+KMMHWPTGIENCASGF+TH ADFAPQI + +DDLE+EWP ++ IGP+PNL+V
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWPTKRQIGPLPNLIV 60
Query: 409 TAGNILEVYVVRVQEE 456
TA NILEVY+VRVQE+
Sbjct: 61 TAANILEVYMVRVQED 76
>ref|XP_002268371.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Vitis vinifera]
Length = 1442
Score = 130 bits (328), Expect = 1e-28
Identities = 57/76 (75%), Positives = 68/76 (89%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MSYAA+KMMHWPTGIENCASGF+TH ADFAPQI + +DDLE+EWP ++ IGP+PNL+V
Sbjct: 1 MSYAAYKMMHWPTGIENCASGFVTHSRADFAPQIAPIQTDDLESEWPTKRQIGPLPNLIV 60
Query: 409 TAGNILEVYVVRVQEE 456
TA NILEVY+VRVQE+
Sbjct: 61 TAANILEVYMVRVQED 76
>ref|XP_004308159.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Fragaria vesca subsp. vesca]
Length = 1439
Score = 125 bits (315), Expect = 5e-27
Identities = 57/77 (74%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPA-RKGIGPIPNLV 405
MSYAA KMMHWPTGIENCA+GFITH ADF P+IP + +DDL+++WPA R+ IGP+PNLV
Sbjct: 1 MSYAAHKMMHWPTGIENCAAGFITHSRADFVPRIPQIQTDDLDSDWPAPRREIGPVPNLV 60
Query: 406 VTAGNILEVYVVRVQEE 456
VTA N+LEVYVVRVQE+
Sbjct: 61 VTAANVLEVYVVRVQEQ 77
>ref|XP_007220310.1| hypothetical protein PRUPE_ppa000211mg [Prunus persica]
gi|462416772|gb|EMJ21509.1| hypothetical protein
PRUPE_ppa000211mg [Prunus persica]
Length = 1459
Score = 125 bits (315), Expect = 5e-27
Identities = 57/77 (74%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWP-ARKGIGPIPNLV 405
MS+AA+KMMHWPTGIENCASGFI+H +DF P+IP + ++DLE+EWP +R+ IGPIP+LV
Sbjct: 1 MSFAAYKMMHWPTGIENCASGFISHSRSDFVPRIPPIQTEDLESEWPTSRREIGPIPDLV 60
Query: 406 VTAGNILEVYVVRVQEE 456
VTAGN+LEVYVVRVQEE
Sbjct: 61 VTAGNVLEVYVVRVQEE 77
>gb|EXC20897.1| Cleavage and polyadenylation specificity factor subunit 1 [Morus
notabilis]
Length = 1479
Score = 125 bits (314), Expect = 6e-27
Identities = 55/77 (71%), Positives = 69/77 (89%), Gaps = 1/77 (1%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPA-RKGIGPIPNLV 405
MS+AA+KMMHWPTGIENCA+GF++H ADF P+IP + SDDL+++WPA R+ GP+PNLV
Sbjct: 1 MSFAAYKMMHWPTGIENCAAGFVSHSRADFVPRIPPIQSDDLDSDWPAGRRETGPVPNLV 60
Query: 406 VTAGNILEVYVVRVQEE 456
VTAGN+LEVYVVR+QEE
Sbjct: 61 VTAGNVLEVYVVRLQEE 77
>ref|XP_002510905.1| cleavage and polyadenylation specificity factor cpsf, putative
[Ricinus communis] gi|223550020|gb|EEF51507.1| cleavage
and polyadenylation specificity factor cpsf, putative
[Ricinus communis]
Length = 1461
Score = 125 bits (313), Expect = 8e-27
Identities = 54/77 (70%), Positives = 71/77 (92%), Gaps = 1/77 (1%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEW-PARKGIGPIPNLV 405
MSYAA+KM+HWPTGIE+CASG+ITH ADF PQIP + +D+L++EW P+++GIGP+PNL+
Sbjct: 1 MSYAAYKMLHWPTGIESCASGYITHSRADFVPQIPPIQTDNLDSEWPPSKRGIGPMPNLI 60
Query: 406 VTAGNILEVYVVRVQEE 456
VTAG++LEVYVVRVQE+
Sbjct: 61 VTAGSVLEVYVVRVQED 77
>ref|XP_006490256.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X2 [Citrus sinensis]
Length = 1457
Score = 122 bits (305), Expect = 7e-26
Identities = 51/76 (67%), Positives = 67/76 (88%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MS+AA+KMMHWPTGI NC SGFITH AD+ PQIP + +++L++E P+++GIGP+PNLVV
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60
Query: 409 TAGNILEVYVVRVQEE 456
TA N++E+YVVRVQEE
Sbjct: 61 TAANVIEIYVVRVQEE 76
>ref|XP_006490255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like isoform X1 [Citrus sinensis]
Length = 1458
Score = 122 bits (305), Expect = 7e-26
Identities = 51/76 (67%), Positives = 67/76 (88%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MS+AA+KMMHWPTGI NC SGFITH AD+ PQIP + +++L++E P+++GIGP+PNLVV
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60
Query: 409 TAGNILEVYVVRVQEE 456
TA N++E+YVVRVQEE
Sbjct: 61 TAANVIEIYVVRVQEE 76
>ref|XP_006421760.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523633|gb|ESR35000.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1457
Score = 122 bits (305), Expect = 7e-26
Identities = 51/76 (67%), Positives = 67/76 (88%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MS+AA+KMMHWPTGI NC SGFITH AD+ PQIP + +++L++E P+++GIGP+PNLVV
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60
Query: 409 TAGNILEVYVVRVQEE 456
TA N++E+YVVRVQEE
Sbjct: 61 TAANVIEIYVVRVQEE 76
>ref|XP_006421759.1| hypothetical protein CICLE_v10004147mg [Citrus clementina]
gi|557523632|gb|ESR34999.1| hypothetical protein
CICLE_v10004147mg [Citrus clementina]
Length = 1458
Score = 122 bits (305), Expect = 7e-26
Identities = 51/76 (67%), Positives = 67/76 (88%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MS+AA+KMMHWPTGI NC SGFITH AD+ PQIP + +++L++E P+++GIGP+PNLVV
Sbjct: 1 MSFAAYKMMHWPTGIANCGSGFITHSRADYVPQIPLIQTEELDSELPSKRGIGPVPNLVV 60
Query: 409 TAGNILEVYVVRVQEE 456
TA N++E+YVVRVQEE
Sbjct: 61 TAANVIEIYVVRVQEE 76
>ref|XP_006401932.1| hypothetical protein EUTSA_v10012441mg [Eutrema salsugineum]
gi|557103022|gb|ESQ43385.1| hypothetical protein
EUTSA_v10012441mg [Eutrema salsugineum]
Length = 1445
Score = 119 bits (298), Expect = 4e-25
Identities = 57/78 (73%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGAD-FAPQIPTVTSDDLETEWPA-RKGIGPIPNL 402
MS+AAFKMMHWPTG+ENCASG+ITH +D QIP V+ DDLE EWPA ++GIG +PN+
Sbjct: 1 MSFAAFKMMHWPTGVENCASGYITHSISDTTTQQIPIVSGDDLEAEWPAPKRGIGAVPNV 60
Query: 403 VVTAGNILEVYVVRVQEE 456
V+TAGNILEVYVVRVQEE
Sbjct: 61 VITAGNILEVYVVRVQEE 78
>ref|XP_002864120.1| hypothetical protein ARALYDRAFT_495232 [Arabidopsis lyrata subsp.
lyrata] gi|297309955|gb|EFH40379.1| hypothetical protein
ARALYDRAFT_495232 [Arabidopsis lyrata subsp. lyrata]
Length = 1444
Score = 116 bits (291), Expect = 3e-24
Identities = 55/78 (70%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVT-SDDLETEWPARK-GIGPIPNL 402
MS+AAFKMMHWPTG+ENCASG+ITH +D QIP V+ DD+E EWP K GIGP+PN+
Sbjct: 1 MSFAAFKMMHWPTGVENCASGYITHSLSDSTLQIPIVSGDDDMEAEWPNHKRGIGPLPNV 60
Query: 403 VVTAGNILEVYVVRVQEE 456
V+TAGNILEVY+VR QEE
Sbjct: 61 VITAGNILEVYIVRAQEE 78
>ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 643
Score = 113 bits (282), Expect = 3e-23
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MS+AA++MMHWPTGIENC S +ITH ADF P + T SDDL+++W R+ IGP+PNLVV
Sbjct: 1 MSFAAYRMMHWPTGIENCDSAYITHSRADFVPAV-TSHSDDLDSDWHPRRDIGPVPNLVV 59
Query: 409 TAGNILEVYVVRVQEE 456
TAGN+LEVYVVRV EE
Sbjct: 60 TAGNVLEVYVVRVLEE 75
>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
1-like [Cucumis sativus]
Length = 1504
Score = 113 bits (282), Expect = 3e-23
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPARKGIGPIPNLVV 408
MS+AA++MMHWPTGIENC S +ITH ADF P + T SDDL+++W R+ IGP+PNLVV
Sbjct: 1 MSFAAYRMMHWPTGIENCDSAYITHSRADFVPAV-TSHSDDLDSDWHPRRDIGPVPNLVV 59
Query: 409 TAGNILEVYVVRVQEE 456
TAGN+LEVYVVRV EE
Sbjct: 60 TAGNVLEVYVVRVLEE 75
>dbj|BAB11613.1| cleavage and polyadenylation specificity factor subunit
[Arabidopsis thaliana]
Length = 1448
Score = 112 bits (281), Expect = 4e-23
Identities = 52/78 (66%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVT-SDDLETEWP-ARKGIGPIPNL 402
MS+AA+KMMHWPTG+ENCASG+ITH +D QIP V+ DD+E EWP ++GIGP+PN+
Sbjct: 1 MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60
Query: 403 VVTAGNILEVYVVRVQEE 456
V+TA NILEVY+VR QEE
Sbjct: 61 VITAANILEVYIVRAQEE 78
>ref|NP_199979.2| cleavage and polyadenylation specificity factor subunit 1
[Arabidopsis thaliana]
gi|290457637|sp|Q9FGR0.2|CPSF1_ARATH RecName:
Full=Cleavage and polyadenylation specificity factor
subunit 1; AltName: Full=Cleavage and polyadenylation
specificity factor 160 kDa subunit; Short=AtCPSF160;
Short=CPSF 160 kDa subunit gi|332008729|gb|AED96112.1|
cleavage and polyadenylation specificity factor subunit
1 [Arabidopsis thaliana]
Length = 1442
Score = 112 bits (281), Expect = 4e-23
Identities = 52/78 (66%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVT-SDDLETEWP-ARKGIGPIPNL 402
MS+AA+KMMHWPTG+ENCASG+ITH +D QIP V+ DD+E EWP ++GIGP+PN+
Sbjct: 1 MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60
Query: 403 VVTAGNILEVYVVRVQEE 456
V+TA NILEVY+VR QEE
Sbjct: 61 VITAANILEVYIVRAQEE 78
>gb|AAN41460.1| putative cleavage and polyadenylation specificity factor 160 kDa
subunit [Arabidopsis thaliana]
Length = 1442
Score = 112 bits (281), Expect = 4e-23
Identities = 52/78 (66%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVT-SDDLETEWP-ARKGIGPIPNL 402
MS+AA+KMMHWPTG+ENCASG+ITH +D QIP V+ DD+E EWP ++GIGP+PN+
Sbjct: 1 MSFAAYKMMHWPTGVENCASGYITHSLSDSTLQIPIVSVHDDIEAEWPNPKRGIGPLPNV 60
Query: 403 VVTAGNILEVYVVRVQEE 456
V+TA NILEVY+VR QEE
Sbjct: 61 VITAANILEVYIVRAQEE 78
>gb|EYU19493.1| hypothetical protein MIMGU_mgv1a000203mg [Mimulus guttatus]
Length = 1437
Score = 108 bits (271), Expect = 6e-22
Identities = 49/77 (63%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEWPA-RKGIGPIPNLV 405
MS+AA+KMMHW TGIE+CASGFITH AD P I V +DD++++WPA K +GP+PNLV
Sbjct: 1 MSFAAYKMMHWATGIEHCASGFITHSAADCTPGIAPVAADDMDSDWPASTKPVGPVPNLV 60
Query: 406 VTAGNILEVYVVRVQEE 456
A N+LEVY VRVQE+
Sbjct: 61 TVAANVLEVYTVRVQED 77
>ref|XP_006851814.1| hypothetical protein AMTR_s00041p00037520 [Amborella trichopoda]
gi|548855397|gb|ERN13281.1| hypothetical protein
AMTR_s00041p00037520 [Amborella trichopoda]
Length = 1459
Score = 108 bits (270), Expect = 8e-22
Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 3/79 (3%)
Frame = +1
Query: 229 MSYAAFKMMHWPTGIENCASGFITHCGADFAPQIPTVTSDDLETEW---PARKGIGPIPN 399
MS++AFK+MHW T +ENCASG+ITH +DFA +P + +DD ++EW P + IGPIPN
Sbjct: 1 MSFSAFKLMHWATAVENCASGYITHSFSDFAASVPAIQNDDPDSEWDQPPVKARIGPIPN 60
Query: 400 LVVTAGNILEVYVVRVQEE 456
LV++A N+LEVYV+RVQEE
Sbjct: 61 LVISAANVLEVYVIRVQEE 79