BLASTX nr result

ID: Sinomenium22_contig00033615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00033615
         (328 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis]          60   2e-07
ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...    56   5e-06
ref|XP_006416360.1| hypothetical protein EUTSA_v10009964mg [Eutr...    55   8e-06
ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thali...    55   8e-06

>gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis]
          Length = 186

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = -2

Query: 327 CPSCRQILVVARCRKCGEFPAVSNDVDLEIGCKAREDDPHRLLP 196
           CPSCRQILVVARC+KCG FPA S+  + E   K RED  +R LP
Sbjct: 143 CPSCRQILVVARCQKCGGFPASSSSSEAEARLKEREDHINRFLP 186


>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
 Frame = -2

Query: 327 CPSCRQILVVARCRKCGEFPAVSND--VDLEIGCKAREDDPHRLLP 196
           CPSCRQILVVARC+KCG  PA S+    + E   K REDD +R LP
Sbjct: 139 CPSCRQILVVARCQKCGGVPASSSSTGAETESRLKEREDDVNRFLP 184


>ref|XP_006416360.1| hypothetical protein EUTSA_v10009964mg [Eutrema salsugineum]
           gi|557094131|gb|ESQ34713.1| hypothetical protein
           EUTSA_v10009964mg [Eutrema salsugineum]
          Length = 200

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
 Frame = -2

Query: 327 CPSCRQILVVARCRKCGEFPAVS-----NDVDLEIGCKAREDDPHRLLP 196
           CPSCRQILVVARC KCG  P  S     ++ ++EI  K  EDDP+  LP
Sbjct: 152 CPSCRQILVVARCHKCGGLPGSSSSGPESEPEIEIRIKQGEDDPNSFLP 200


>ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana]
           gi|68565308|sp|Q9LM69.1|ATL80_ARATH RecName:
           Full=RING-H2 finger protein ATL80
           gi|8886938|gb|AAF80624.1|AC069251_17 F2D10.34
           [Arabidopsis thaliana] gi|15027985|gb|AAK76523.1|
           unknown protein [Arabidopsis thaliana]
           gi|332191907|gb|AEE30028.1| RING-H2 finger protein ATL80
           [Arabidopsis thaliana]
          Length = 197

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 5/49 (10%)
 Frame = -2

Query: 327 CPSCRQILVVARCRKCGEFPAVS-----NDVDLEIGCKAREDDPHRLLP 196
           CPSCRQILVVARC KCG  P  S     ++ ++EI  K  EDDP+  LP
Sbjct: 149 CPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRIKQGEDDPNSFLP 197


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