BLASTX nr result
ID: Sinomenium22_contig00033615
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00033615 (328 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis] 60 2e-07 ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit... 56 5e-06 ref|XP_006416360.1| hypothetical protein EUTSA_v10009964mg [Eutr... 55 8e-06 ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thali... 55 8e-06 >gb|EXB56281.1| RING-H2 finger protein ATL80 [Morus notabilis] Length = 186 Score = 60.5 bits (145), Expect = 2e-07 Identities = 28/44 (63%), Positives = 32/44 (72%) Frame = -2 Query: 327 CPSCRQILVVARCRKCGEFPAVSNDVDLEIGCKAREDDPHRLLP 196 CPSCRQILVVARC+KCG FPA S+ + E K RED +R LP Sbjct: 143 CPSCRQILVVARCQKCGGFPASSSSSEAEARLKEREDHINRFLP 186 >ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera] Length = 184 Score = 56.2 bits (134), Expect = 5e-06 Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 2/46 (4%) Frame = -2 Query: 327 CPSCRQILVVARCRKCGEFPAVSND--VDLEIGCKAREDDPHRLLP 196 CPSCRQILVVARC+KCG PA S+ + E K REDD +R LP Sbjct: 139 CPSCRQILVVARCQKCGGVPASSSSTGAETESRLKEREDDVNRFLP 184 >ref|XP_006416360.1| hypothetical protein EUTSA_v10009964mg [Eutrema salsugineum] gi|557094131|gb|ESQ34713.1| hypothetical protein EUTSA_v10009964mg [Eutrema salsugineum] Length = 200 Score = 55.5 bits (132), Expect = 8e-06 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 5/49 (10%) Frame = -2 Query: 327 CPSCRQILVVARCRKCGEFPAVS-----NDVDLEIGCKAREDDPHRLLP 196 CPSCRQILVVARC KCG P S ++ ++EI K EDDP+ LP Sbjct: 152 CPSCRQILVVARCHKCGGLPGSSSSGPESEPEIEIRIKQGEDDPNSFLP 200 >ref|NP_173506.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana] gi|68565308|sp|Q9LM69.1|ATL80_ARATH RecName: Full=RING-H2 finger protein ATL80 gi|8886938|gb|AAF80624.1|AC069251_17 F2D10.34 [Arabidopsis thaliana] gi|15027985|gb|AAK76523.1| unknown protein [Arabidopsis thaliana] gi|332191907|gb|AEE30028.1| RING-H2 finger protein ATL80 [Arabidopsis thaliana] Length = 197 Score = 55.5 bits (132), Expect = 8e-06 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 5/49 (10%) Frame = -2 Query: 327 CPSCRQILVVARCRKCGEFPAVS-----NDVDLEIGCKAREDDPHRLLP 196 CPSCRQILVVARC KCG P S ++ ++EI K EDDP+ LP Sbjct: 149 CPSCRQILVVARCHKCGGLPGSSSSGLESEPEIEIRIKQGEDDPNSFLP 197