BLASTX nr result
ID: Sinomenium22_contig00033496
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00033496
(1291 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532144.1| conserved hypothetical protein [Ricinus comm... 56 2e-08
ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265... 56 4e-07
ref|XP_006364406.1| PREDICTED: uncharacterized protein LOC102586... 51 4e-07
ref|XP_006283032.1| hypothetical protein CARUB_v10004024mg [Caps... 58 4e-07
ref|NP_193739.1| protein EMBRYO DEFECTIVE 1895 [Arabidopsis thal... 56 2e-06
ref|XP_004233951.1| PREDICTED: uncharacterized protein LOC101266... 49 4e-06
ref|XP_004233952.1| PREDICTED: uncharacterized protein LOC101266... 49 4e-06
ref|XP_006479133.1| PREDICTED: DNA ligase 1-like isoform X1 [Cit... 59 5e-06
ref|XP_004493175.1| PREDICTED: DNA ligase 1-like [Cicer arietinum] 59 5e-06
ref|XP_004297945.1| PREDICTED: uncharacterized protein LOC101292... 44 5e-06
ref|XP_004489689.1| PREDICTED: myb-like protein X-like [Cicer ar... 59 6e-06
ref|XP_007041024.1| ARM repeat superfamily protein, putative iso... 58 8e-06
ref|XP_007041022.1| ARM repeat superfamily protein, putative iso... 58 8e-06
ref|XP_002867893.1| EMB1895 [Arabidopsis lyrata subsp. lyrata] g... 53 9e-06
>ref|XP_002532144.1| conserved hypothetical protein [Ricinus communis]
gi|223528180|gb|EEF30243.1| conserved hypothetical
protein [Ricinus communis]
Length = 1166
Score = 56.2 bits (134), Expect(2) = 2e-08
Identities = 25/39 (64%), Positives = 29/39 (74%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRAP 922
F VGSY+IKW IDN+GSYWSLLPLN PV V+ +P
Sbjct: 1125 FPVGSYRIKWHSCLIDNQGSYWSLLPLNGEPVFTVQGSP 1163
Score = 30.8 bits (68), Expect(2) = 2e-08
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = -3
Query: 1283 SYQMPNTRWTSHGASAFDLPSLGR**CIGLNEKLLLYVN---KGIDRTGK*RGRHSDSD- 1116
S+Q P + + G D I +N KLL YV K ID R SD+D
Sbjct: 1038 SFQEPKSCEETRGEMHLDYQPWEISSMIAMNRKLLRYVTEREKKIDNGKSGRDYDSDNDE 1097
Query: 1115 GSVWSF*I*TK*EKAR-FSTCLLDVS 1041
G V+ F ++ + FS CLLDVS
Sbjct: 1098 GKVYGFVCFEVNDRGQGFSNCLLDVS 1123
>ref|XP_002276495.1| PREDICTED: uncharacterized protein LOC100265170 [Vitis vinifera]
gi|296082233|emb|CBI21238.3| unnamed protein product
[Vitis vinifera]
Length = 1166
Score = 56.2 bits (134), Expect(2) = 4e-07
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPV 943
F VGSYKIKW C+D++GSYWSLLPLN PV
Sbjct: 1121 FPVGSYKIKWHSCCVDDQGSYWSLLPLNAPPV 1152
Score = 26.2 bits (56), Expect(2) = 4e-07
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 1202 IGLNEKLLLYVNK-GIDRTGK*RGRHSDSDGSVWSF*I*TK*EKAR-FSTCLLDVS 1041
I LNE L +V + G K R + G V +F E+ + FSTCLLDVS
Sbjct: 1064 IDLNESLFQHVTEDGKTTNAKLRSVDNGDGGVVKAFVCFEPNERGQGFSTCLLDVS 1119
>ref|XP_006364406.1| PREDICTED: uncharacterized protein LOC102586911 [Solanum tuberosum]
Length = 1154
Score = 51.2 bits (121), Expect(2) = 4e-07
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLN 955
F VGSY+IKW CIDN G+YWSL+PLN
Sbjct: 1107 FPVGSYQIKWHSCCIDNNGAYWSLMPLN 1134
Score = 31.2 bits (69), Expect(2) = 4e-07
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 1202 IGLNEKLLLYVNKGIDRTGK*RGRHSDSDGSVWSF*I*TK*EKAR-FSTCLLDVSA 1038
+GLN+KLL + +R G ++ +V F EK + F+TCLLDVSA
Sbjct: 1051 VGLNDKLLHFTTGTTERDGLHAMENAGGTSAVDKFVCFDPNEKGQGFATCLLDVSA 1106
>ref|XP_006283032.1| hypothetical protein CARUB_v10004024mg [Capsella rubella]
gi|482551737|gb|EOA15930.1| hypothetical protein
CARUB_v10004024mg [Capsella rubella]
Length = 1135
Score = 58.2 bits (139), Expect(3) = 4e-07
Identities = 26/38 (68%), Positives = 28/38 (73%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRA 925
F VGSYKIKW CID GSYW+LLPLN PV VK+A
Sbjct: 1097 FPVGSYKIKWLSCCIDQHGSYWNLLPLNGKPVFTVKKA 1134
Score = 22.3 bits (46), Expect(3) = 4e-07
Identities = 16/55 (29%), Positives = 22/55 (40%)
Frame = -1
Query: 1231 TFQAWEDDDALG*MKSYCCM*IKELIELVNSAEGILIVMGLCGRFEFEPNERKQG 1067
++ W D+D IK +L S G+ +FEPNER QG
Sbjct: 1032 SYSPWRDEDLEEMSNKLYHHAIKSSKKLEVSGRSDWTKDGVSTIAQFEPNERGQG 1086
Score = 20.8 bits (42), Expect(3) = 4e-07
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 1067 FSTCLLDVS 1041
FS+CLLDVS
Sbjct: 1087 FSSCLLDVS 1095
>ref|NP_193739.1| protein EMBRYO DEFECTIVE 1895 [Arabidopsis thaliana]
gi|2827660|emb|CAA16614.1| hypothetical protein
[Arabidopsis thaliana] gi|7268801|emb|CAB79006.1|
hypothetical protein [Arabidopsis thaliana]
gi|332658868|gb|AEE84268.1| protein embryo defective 1895
[Arabidopsis thaliana]
Length = 1134
Score = 56.2 bits (134), Expect(3) = 2e-06
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRA 925
F VGSY+IKW C+D GSYW+LLPLN PV VK+A
Sbjct: 1096 FPVGSYQIKWLSCCVDQHGSYWNLLPLNGKPVFTVKKA 1133
Score = 21.9 bits (45), Expect(3) = 2e-06
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1
Query: 1096 EFEPNERKQG 1067
+FEPNER QG
Sbjct: 1076 QFEPNERGQG 1085
Score = 20.8 bits (42), Expect(3) = 2e-06
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 1067 FSTCLLDVS 1041
FS+CLLDVS
Sbjct: 1086 FSSCLLDVS 1094
>ref|XP_004233951.1| PREDICTED: uncharacterized protein LOC101266601 [Solanum
lycopersicum]
Length = 1242
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRA 925
F VGSY+IKW CID G+YWSL+PLN + V+ +
Sbjct: 1106 FPVGSYQIKWHSCCIDKNGAYWSLMPLNTNQFFTVQES 1143
Score = 29.6 bits (65), Expect(2) = 4e-06
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 1202 IGLNEKLLLYVNKGIDRTGK*RGRHSDSDGSVWSF*I*TK*EKAR-FSTCLLDVSA 1038
+GLN+KLL + +R G ++ +V F EK + F+TCLL+VSA
Sbjct: 1050 VGLNDKLLHFTTGTTERDGLRAMENAGGSSAVDKFVCFDPNEKGQGFATCLLNVSA 1105
>ref|XP_004233952.1| PREDICTED: uncharacterized protein LOC101266905 [Solanum
lycopersicum]
Length = 1153
Score = 49.3 bits (116), Expect(2) = 4e-06
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRA 925
F VGSY+IKW CID G+YWSL+PLN + V+ +
Sbjct: 1106 FPVGSYQIKWHSCCIDKNGAYWSLMPLNTNQFFTVQES 1143
Score = 29.6 bits (65), Expect(2) = 4e-06
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -3
Query: 1202 IGLNEKLLLYVNKGIDRTGK*RGRHSDSDGSVWSF*I*TK*EKAR-FSTCLLDVSA 1038
+GLN+KLL + +R G ++ +V F EK + F+TCLL+VSA
Sbjct: 1050 VGLNDKLLHFTTGTTERDGLRAMENAGGSSAVDKFVCFDPNEKGQGFATCLLNVSA 1105
>ref|XP_006479133.1| PREDICTED: DNA ligase 1-like isoform X1 [Citrus sinensis]
gi|568850898|ref|XP_006479134.1| PREDICTED: DNA ligase
1-like isoform X2 [Citrus sinensis]
gi|568850900|ref|XP_006479135.1| PREDICTED: DNA ligase
1-like isoform X3 [Citrus sinensis]
Length = 345
Score = 58.9 bits (141), Expect = 5e-06
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +1
Query: 361 NKTSENMRKLNSKDTTKDHMKLKQKLEKIHAMIKALLVKRADIMKLIKEAEKEESQVHAE 540
+K RKL+ K +KD KLKQKLE ++A I+AL+ K+ADIM+ I+EAE+E S E
Sbjct: 280 DKKDGKKRKLDGKGKSKDIGKLKQKLENVNAKIEALIEKKADIMRQIQEAERESSGT-TE 338
Query: 541 KSEDK 555
K DK
Sbjct: 339 KETDK 343
>ref|XP_004493175.1| PREDICTED: DNA ligase 1-like [Cicer arietinum]
Length = 320
Score = 58.9 bits (141), Expect = 5e-06
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Frame = +1
Query: 316 TNKRCQTQINKDDIANKTS-----ENMRKLNSKDTTKDHMKLKQKLEKIHAMIKALLVKR 480
T K C + +K ++ K + +KL+ KD T D KLKQKLEK++A I+ALL K+
Sbjct: 236 TVKECGKEDDKKEVKEKKKKEDKEDKKKKLSGKDKTNDVGKLKQKLEKMNAKIEALLEKK 295
Query: 481 ADIMKLIKEAEKEESQVHAEKSED 552
ADI + IKEAE V + ED
Sbjct: 296 ADIERQIKEAEDGGHGVIVKDKED 319
>ref|XP_004297945.1| PREDICTED: uncharacterized protein LOC101292696 [Fragaria vesca
subsp. vesca]
Length = 1131
Score = 43.5 bits (101), Expect(3) = 5e-06
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHV 934
F VGSY+IKW C DN+G W+L LN PV V
Sbjct: 1094 FPVGSYRIKWYSCCFDNQGQCWTLPSLNPGPVFTV 1128
Score = 33.1 bits (74), Expect(3) = 5e-06
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -3
Query: 1193 NEKLLLYVNKGIDRTGK*RGRHSDSDGSVWSF*I*TK*EKAR-FSTCLLDVS 1041
NEKLL Y + G RGR SD V SF ++ + FS+CLLDVS
Sbjct: 1041 NEKLLKYATDCSTKKGNKRGRSSDEGEFVNSFVCFDLNDRGQGFSSCLLDVS 1092
Score = 20.8 bits (42), Expect(3) = 5e-06
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 1231 TFQAWEDDD 1205
TFQ WE DD
Sbjct: 1028 TFQPWETDD 1036
>ref|XP_004489689.1| PREDICTED: myb-like protein X-like [Cicer arietinum]
Length = 428
Score = 58.5 bits (140), Expect = 6e-06
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +1
Query: 343 NKDDIANKTSENMRKLNSKDTTKDHMKLKQKLEKIHAMIKALLVKRADIMKLIKEAEKEE 522
NK + +K + RKL KD +KD KLKQKLEKI+ ++ALL ++A+I K IKEAE +E
Sbjct: 358 NKKEDKDKGGKK-RKLTGKDKSKDLSKLKQKLEKINGKVEALLEQKAEIEKQIKEAE-DE 415
Query: 523 SQVHAEKSED 552
V EK++D
Sbjct: 416 GNVVVEKTKD 425
>ref|XP_007041024.1| ARM repeat superfamily protein, putative isoform 3 [Theobroma cacao]
gi|508704959|gb|EOX96855.1| ARM repeat superfamily
protein, putative isoform 3 [Theobroma cacao]
Length = 835
Score = 58.2 bits (139), Expect = 8e-06
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRA 925
F VGSY+IKW CIDN+GSYWS+LPLN PV V+++
Sbjct: 795 FPVGSYRIKWYSCCIDNQGSYWSILPLNFGPVFTVQQS 832
>ref|XP_007041022.1| ARM repeat superfamily protein, putative isoform 1 [Theobroma cacao]
gi|590681133|ref|XP_007041023.1| ARM repeat superfamily
protein, putative isoform 1 [Theobroma cacao]
gi|508704957|gb|EOX96853.1| ARM repeat superfamily
protein, putative isoform 1 [Theobroma cacao]
gi|508704958|gb|EOX96854.1| ARM repeat superfamily
protein, putative isoform 1 [Theobroma cacao]
Length = 1146
Score = 58.2 bits (139), Expect = 8e-06
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRA 925
F VGSY+IKW CIDN+GSYWS+LPLN PV V+++
Sbjct: 1106 FPVGSYRIKWYSCCIDNQGSYWSILPLNFGPVFTVQQS 1143
>ref|XP_002867893.1| EMB1895 [Arabidopsis lyrata subsp. lyrata]
gi|297313729|gb|EFH44152.1| EMB1895 [Arabidopsis lyrata
subsp. lyrata]
Length = 1134
Score = 53.1 bits (126), Expect(3) = 9e-06
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = -2
Query: 1038 FAVGSYKIKWRGGCIDNRGSYWSLLPLNMSPVVHVKRA 925
F VGSY+IKW C D GSYW LLPLN PV +K+A
Sbjct: 1096 FPVGSYQIKWLSCCTDQHGSYWILLPLNGKPVFTIKKA 1133
Score = 22.7 bits (47), Expect(3) = 9e-06
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 15/56 (26%)
Frame = -1
Query: 1189 KSYCCM*IKELIELVNSAEGILIVMG----LCGRFE-----------FEPNERKQG 1067
KSY ++L+E+ N I G + GRF+ FEPNER QG
Sbjct: 1030 KSYTPWRDEDLVEMSNKLFHHAIKSGKKPEVSGRFDWTKSGVSTVVQFEPNERGQG 1085
Score = 20.8 bits (42), Expect(3) = 9e-06
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -3
Query: 1067 FSTCLLDVS 1041
FS+CLLDVS
Sbjct: 1086 FSSCLLDVS 1094