BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00033474
         (851 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containi...   280   4e-73
emb|CBI15328.3| unnamed protein product [Vitis vinifera]              280   4e-73
ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...   258   3e-66
ref|XP_007144829.1| hypothetical protein PHAVU_007G187600g [Phas...   253   5e-65
ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containi...   251   2e-64
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi...   251   3e-64
ref|XP_007037613.1| Pentatricopeptide repeat-containing protein,...   248   3e-63
ref|XP_002514631.1| pentatricopeptide repeat-containing protein,...   247   4e-63
ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containi...   246   6e-63
ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containi...   246   8e-63
ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citr...   246   8e-63
ref|XP_006372539.1| hypothetical protein POPTR_0017s02600g [Popu...   243   5e-62
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...   243   9e-62
ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containi...   239   1e-60
ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containi...   231   3e-58
ref|XP_003630353.1| Pentatricopeptide repeat-containing protein ...   229   1e-57
gb|AFK45023.1| unknown [Medicago truncatula]                          229   1e-57
ref|NP_200904.1| pentatricopeptide repeat-containing protein [Ar...   223   7e-56
ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Caps...   221   4e-55
gb|AAM63453.1| unknown [Arabidopsis thaliana]                         220   5e-55

>ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Vitis vinifera]
          Length = 516

 Score =  280 bits (717), Expect = 4e-73
 Identities = 134/209 (64%), Positives = 168/209 (80%)
 Frame = -3

Query: 627 PFFPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFSHVSPTP 448
           P FP SR FSS     ++      ++AQ++++ELLKD + E VP+ +RL+L FSH++P+P
Sbjct: 50  PSFPLSRRFSSQPNNSADD--DHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSP 107

Query: 447 SLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDG 268
            L+ Q LN SPDAGRTVLGF++W+SS P F + DETIS+ VDYFGRRKDFK IHE+L+DG
Sbjct: 108 PLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDG 167

Query: 267 REINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASY 88
           R   G KTL S+IDRLVRAGRATQ VSFF++ME+DYGF RD+ SL MVVS LCEHG AS+
Sbjct: 168 RNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASH 227

Query: 87  AEKMVKNLANEFFPDESICDLLVKGWCVD 1
           AEK+VKN+ANE FP+E+ICDLL+KGWCVD
Sbjct: 228 AEKVVKNVANEIFPNETICDLLIKGWCVD 256


>emb|CBI15328.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  280 bits (717), Expect = 4e-73
 Identities = 134/209 (64%), Positives = 168/209 (80%)
 Frame = -3

Query: 627 PFFPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFSHVSPTP 448
           P FP SR FSS     ++      ++AQ++++ELLKD + E VP+ +RL+L FSH++P+P
Sbjct: 66  PSFPLSRRFSSQPNNSADD--DHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHITPSP 123

Query: 447 SLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDG 268
            L+ Q LN SPDAGRTVLGF++W+SS P F + DETIS+ VDYFGRRKDFK IHE+L+DG
Sbjct: 124 PLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEVLMDG 183

Query: 267 REINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASY 88
           R   G KTL S+IDRLVRAGRATQ VSFF++ME+DYGF RD+ SL MVVS LCEHG AS+
Sbjct: 184 RNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHGFASH 243

Query: 87  AEKMVKNLANEFFPDESICDLLVKGWCVD 1
           AEK+VKN+ANE FP+E+ICDLL+KGWCVD
Sbjct: 244 AEKVVKNVANEIFPNETICDLLIKGWCVD 272


>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
           mitochondrial-like [Glycine max]
          Length = 509

 Score =  258 bits (658), Expect = 3e-66
 Identities = 126/227 (55%), Positives = 167/227 (73%), Gaps = 4/227 (1%)
 Frame = -3

Query: 669 STLQHN-LFTYVPSQPFFPSSRAFSSVSPQISEHLKG---TEEVAQAITTELLKDQNEES 502
           S + H+ LF    S  F+  SR   + S  I+ H      T+E+A ++++ELLK+ + ++
Sbjct: 25  SPIHHSPLFPRHSSSHFY--SRTLFTPSFFITRHFSSETQTDEIASSLSSELLKEPDSDA 82

Query: 501 VPLKERLELHFSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVD 322
           + + +RL L FSH++PTP+L+ Q LN SP AGRTVLGFHQW+SS P F++ D+T+SY VD
Sbjct: 83  LSVSQRLNLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFSHTDDTLSYFVD 142

Query: 321 YFGRRKDFKVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDK 142
           YFGRRKDFK  H++L       GPKTLAS+IDRLVRAGR++QAV FFE+ME DYG  RD+
Sbjct: 143 YFGRRKDFKATHDVLAAASPAAGPKTLASAIDRLVRAGRSSQAVQFFERMERDYGLKRDR 202

Query: 141 ASLKMVVSALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
            SLK+VV  LC  G ASYAEKMVK+LA EFFPDE+ CD+L++GWC+D
Sbjct: 203 DSLKVVVEKLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWCID 249


>ref|XP_007144829.1| hypothetical protein PHAVU_007G187600g [Phaseolus vulgaris]
           gi|561018019|gb|ESW16823.1| hypothetical protein
           PHAVU_007G187600g [Phaseolus vulgaris]
          Length = 505

 Score =  253 bits (647), Expect = 5e-65
 Identities = 124/222 (55%), Positives = 156/222 (70%), Gaps = 10/222 (4%)
 Frame = -3

Query: 636 PSQPFFPS-------SRAFSSVSPQISEHLKG---TEEVAQAITTELLKDQNEESVPLKE 487
           P  P  P        SR   S S  ++ H      T+ +A ++++ELLK+ + + + + +
Sbjct: 25  PPPPLIPGDSTTHFHSRTLFSPSLFLNRHFSSETQTDPIANSLSSELLKELDSDPLSVSQ 84

Query: 486 RLELHFSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRR 307
           RL L FSH++PTP+L+ Q LN SP AGRTVLGFHQW+SS P FT+ D T+SY VDYFGRR
Sbjct: 85  RLHLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFTHTDHTLSYFVDYFGRR 144

Query: 306 KDFKVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKM 127
           KDFK  H++L      +GPKTL S+IDRLVRAGR +QAV FFE+ME DYG  RD+ SLK+
Sbjct: 145 KDFKATHDLLSAAAAASGPKTLESAIDRLVRAGRPSQAVQFFERMERDYGLKRDRCSLKV 204

Query: 126 VVSALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
           VV  LC  G ASYAEKMVK LA EFFPDE+ CDLL++GWCVD
Sbjct: 205 VVEKLCSKGFASYAEKMVKELAREFFPDEATCDLLIRGWCVD 246


>ref|XP_006345106.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
           mitochondrial-like [Solanum tuberosum]
          Length = 521

 Score =  251 bits (642), Expect = 2e-64
 Identities = 128/231 (55%), Positives = 164/231 (70%), Gaps = 4/231 (1%)
 Frame = -3

Query: 681 CHTISTLQHNLFT----YVPSQPFFPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQ 514
           C  +S  + + FT    +  S  F   S +F S S Q     +  E  AQ++++EL+K+ 
Sbjct: 31  CSQLSLSKTHFFTSPLPHYDSFSFSHYSTSFRSFSSQPESDQE--ETTAQSLSSELVKEL 88

Query: 513 NEESVPLKERLELHFSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETIS 334
           + ES+ + + L+L FSHV+ TPSL+   LN SPDAGRTVLGF +WV S+  F  DDE +S
Sbjct: 89  DAESLSIPQSLDLSFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVKSKESFKVDDEVVS 148

Query: 333 YLVDYFGRRKDFKVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGF 154
           Y VDYFGRRKDFK   ++L+DG  + G KTL S +DRLVRAGR+TQ V+FFE ME DYG 
Sbjct: 149 YFVDYFGRRKDFKAAQDVLIDGIGLAGRKTLESMVDRLVRAGRSTQTVAFFENMEKDYGL 208

Query: 153 VRDKASLKMVVSALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
           VRD  SLK+VVS LCEHG ASYAEKMVK+LA+EFFPDE ICD+L++GWC+D
Sbjct: 209 VRDLDSLKLVVSRLCEHGFASYAEKMVKSLASEFFPDEYICDMLIRGWCID 259


>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
           mitochondrial-like isoformX1 [Glycine max]
          Length = 509

 Score =  251 bits (640), Expect = 3e-64
 Identities = 122/217 (56%), Positives = 159/217 (73%), Gaps = 5/217 (2%)
 Frame = -3

Query: 636 PSQP--FFPSSRAFSSVSPQISEHLKG---TEEVAQAITTELLKDQNEESVPLKERLELH 472
           P QP   F S    +  S  I  H      T+++A ++++ELLK+ + +++ + +RL L 
Sbjct: 34  PQQPSSHFHSRTLLTPSSLFIIRHFSSETQTDQIAHSLSSELLKEPDSDALSVSQRLHLS 93

Query: 471 FSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKV 292
           FSH++PTP+L+ Q LN S ++GRTVLGFHQW+SS P F++ D+T+SY VDYFGRRKDFK 
Sbjct: 94  FSHITPTPNLILQTLNLSHESGRTVLGFHQWLSSNPQFSHTDDTLSYFVDYFGRRKDFKA 153

Query: 291 IHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSAL 112
            H++L       GPKTLAS+IDRLVRAGR +QAV FFE+ME DYG  RD+ASLK+VV  L
Sbjct: 154 THDVLSAASPAAGPKTLASAIDRLVRAGRPSQAVQFFERMERDYGLKRDRASLKVVVEKL 213

Query: 111 CEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
           C  G ASYAEKMVK+LA  FFPDE+ CD+L+KGWCVD
Sbjct: 214 CSKGFASYAEKMVKDLAKVFFPDEATCDMLIKGWCVD 250


>ref|XP_007037613.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao] gi|508774858|gb|EOY22114.1| Pentatricopeptide
           repeat-containing protein, putative [Theobroma cacao]
          Length = 494

 Score =  248 bits (632), Expect = 3e-63
 Identities = 117/207 (56%), Positives = 153/207 (73%)
 Frame = -3

Query: 621 FPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFSHVSPTPSL 442
           F  S+ FS+ SP         + +AQ+++TE+LK+ + + +P+ +RL+L FSH+ PT  L
Sbjct: 37  FLLSKPFSTQSP---------DPIAQSLSTEILKNPDLDPLPITQRLQLSFSHIKPTSLL 87

Query: 441 LFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDGRE 262
           + Q LN SP+AGRTVLGF+ W+ S P F + DET+S+ +DYFGRRKDFK  H++LV+ + 
Sbjct: 88  ISQTLNLSPEAGRTVLGFNDWLLSDPNFNHTDETLSFFIDYFGRRKDFKAAHDLLVNNKS 147

Query: 261 INGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASYAE 82
           + GPKT  SS+DRLVRAGR  Q + FFE M  DYGF RDK SL+++V  LCE+G ASYAE
Sbjct: 148 VAGPKTFESSVDRLVRAGRPAQVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAE 207

Query: 81  KMVKNLANEFFPDESICDLLVKGWCVD 1
           KMVKN ANE FPDE ICDLL+KGWCVD
Sbjct: 208 KMVKNSANEIFPDEMICDLLIKGWCVD 234


>ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546235|gb|EEF47737.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 569

 Score =  247 bits (631), Expect = 4e-63
 Identities = 121/220 (55%), Positives = 162/220 (73%), Gaps = 5/220 (2%)
 Frame = -3

Query: 645 TYVPSQPFFPSS--RAFSSVSPQISEH-LKGTEEVAQAITTELLKDQNEESVPLKERLEL 475
           T+ P   F P S  + FS+ +   + + L+    +AQ+I+ EL+K+ N +S+ + +RL L
Sbjct: 89  THFPKFAFLPLSLSKPFSTQTLNPNNNVLEDPNPIAQSISAELIKNPNSDSLSILQRLNL 148

Query: 474 HFSHV--SPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKD 301
           HFSH+  S TPS++ Q LN SPDAGRTVLGFHQW+     F N DETIS+ +DYFGRRKD
Sbjct: 149 HFSHINNSITPSIILQTLNLSPDAGRTVLGFHQWLVKVANFKNTDETISFFIDYFGRRKD 208

Query: 300 FKVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVV 121
           F+  HE+L D +++ G K   S ++RLVRAGRAT+ + FF++ME DYGF RD+ +L++VV
Sbjct: 209 FQSTHELLCDSKDVIGYKCFESMVNRLVRAGRATKVMGFFDRMERDYGFKRDRENLRLVV 268

Query: 120 SALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
             LC++G ASYAEKMVKNLANE FPDE+ICDLL+KGWCVD
Sbjct: 269 KMLCDNGYASYAEKMVKNLANEIFPDENICDLLIKGWCVD 308


>ref|XP_004236066.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Solanum lycopersicum]
          Length = 522

 Score =  246 bits (629), Expect = 6e-63
 Identities = 128/231 (55%), Positives = 160/231 (69%), Gaps = 4/231 (1%)
 Frame = -3

Query: 681 CHTISTLQHNLFT----YVPSQPFFPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQ 514
           C  IS  + + FT    +  S  F   S +F S S Q     +  E  AQ++++EL+K+ 
Sbjct: 31  CSQISLSKTHFFTSPLPHYDSFSFSHYSTSFRSFSSQSGRDQE--ETTAQSLSSELVKEL 88

Query: 513 NEESVPLKERLELHFSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETIS 334
           + ES+ + + L+L FSHV+ TPSL+   LN SPDAGRTVLGF +WV S+  F  DDE +S
Sbjct: 89  DAESLSIPQSLDLSFSHVNLTPSLILTTLNLSPDAGRTVLGFFKWVKSKESFKVDDEVVS 148

Query: 333 YLVDYFGRRKDFKVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGF 154
             VDYFGRRKDFK   ++L+DG  + G KTL S +DRLVRAGR TQ V+FFE ME DYG 
Sbjct: 149 CFVDYFGRRKDFKAAQDVLIDGIGLTGRKTLESMVDRLVRAGRPTQTVAFFENMEKDYGL 208

Query: 153 VRDKASLKMVVSALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
            RD  SLK+VVS LCEHG ASYAEKMVK+LA EFFPDE ICD+LV+GWC+D
Sbjct: 209 ARDLDSLKLVVSRLCEHGFASYAEKMVKSLACEFFPDEYICDMLVRGWCID 259


>ref|XP_006477702.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
           mitochondrial-like [Citrus sinensis]
          Length = 503

 Score =  246 bits (628), Expect = 8e-63
 Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
 Frame = -3

Query: 612 SRAFSSVSPQISEHLKGTEEV-AQAITTELLKDQNEESVPLKERLELHFSHVSPTPSLLF 436
           S+ FSS      + +   ++V A++++ ELL++   + +P+ +RL L FSHV+PTPSL+ 
Sbjct: 42  SKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQ 101

Query: 435 QVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDGREIN 256
             LN SP+AGR +LGF+ W++    F++ DET+S+  DYFGRRKDFK IH+ LVD +E+ 
Sbjct: 102 STLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVL 161

Query: 255 GPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASYAEKM 76
           GPKTLAS IDRLVRAGR TQ + FFE+ME DYGF RDK SL++VV  LCE+G ASYAEK+
Sbjct: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221

Query: 75  VKNLANEFFPDESICDLLVKGWCVD 1
           VK+ ANE FPD+ ICDLL+KGWCVD
Sbjct: 222 VKDTANEIFPDDKICDLLIKGWCVD 246


>ref|XP_006440794.1| hypothetical protein CICLE_v10019809mg [Citrus clementina]
           gi|557543056|gb|ESR54034.1| hypothetical protein
           CICLE_v10019809mg [Citrus clementina]
          Length = 503

 Score =  246 bits (628), Expect = 8e-63
 Identities = 117/205 (57%), Positives = 155/205 (75%), Gaps = 1/205 (0%)
 Frame = -3

Query: 612 SRAFSSVSPQISEHLKGTEEV-AQAITTELLKDQNEESVPLKERLELHFSHVSPTPSLLF 436
           S+ FSS      + +   ++V A++++ ELL++   + +P+ +RL L FSHV+PTPSL+ 
Sbjct: 42  SKPFSSKPTSNPKTIDDPDQVIARSLSGELLENLEADPLPISQRLHLIFSHVTPTPSLVQ 101

Query: 435 QVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDGREIN 256
             LN SP+AGR +LGF+ W++    F++ DET+S+  DYFGRRKDFK IH+ LVD +E+ 
Sbjct: 102 STLNFSPEAGRAILGFNHWLTQNANFSHTDETLSFFTDYFGRRKDFKAIHDFLVDNKEVL 161

Query: 255 GPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASYAEKM 76
           GPKTLAS IDRLVRAGR TQ + FFE+ME DYGF RDK SL++VV  LCE+G ASYAEK+
Sbjct: 162 GPKTLASCIDRLVRAGRPTQVLGFFERMERDYGFKRDKDSLRLVVEKLCENGYASYAEKL 221

Query: 75  VKNLANEFFPDESICDLLVKGWCVD 1
           VK+ ANE FPD+ ICDLL+KGWCVD
Sbjct: 222 VKDTANEIFPDDKICDLLIKGWCVD 246


>ref|XP_006372539.1| hypothetical protein POPTR_0017s02600g [Populus trichocarpa]
           gi|550319168|gb|ERP50336.1| hypothetical protein
           POPTR_0017s02600g [Populus trichocarpa]
          Length = 398

 Score =  243 bits (621), Expect = 5e-62
 Identities = 121/227 (53%), Positives = 155/227 (68%), Gaps = 8/227 (3%)
 Frame = -3

Query: 657 HNLFTYVPSQPFFP---SSRAFSSVSPQISEHLKGTEE-VAQAITTELLKDQNEESVPLK 490
           H+  T++P  P FP   S R FSS        ++  +  + Q+++TE+ +D N + + + 
Sbjct: 29  HSTPTHLPKTPAFPFCLSQRPFSSSQTLNPNAIESPDPAIVQSLSTEISRDPNTDPLSIS 88

Query: 489 ERLELHFSHVSP----TPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVD 322
           ERL L FSH++     TPSL+ Q L  SPDAGRTV+GFH W+     F  +DE+++  VD
Sbjct: 89  ERLHLSFSHLTKNNALTPSLVLQTLKLSPDAGRTVIGFHNWLIKDANFEQNDESLALFVD 148

Query: 321 YFGRRKDFKVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDK 142
           YFGRRKDFK  H++LV+G+ + G K   S IDRLVRAGR TQ + FFE+ME DYGF RDK
Sbjct: 149 YFGRRKDFKAAHDLLVEGKSVAGVKCFESMIDRLVRAGRTTQVIGFFERMERDYGFKRDK 208

Query: 141 ASLKMVVSALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
            SL  VV  LCE+G ASYAEKMVKNLANE FPD+ ICDLL+KGWCVD
Sbjct: 209 ESLTFVVQKLCENGYASYAEKMVKNLANEIFPDDGICDLLIKGWCVD 255


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Cucumis sativus]
           gi|449477122|ref|XP_004154936.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Cucumis sativus]
          Length = 522

 Score =  243 bits (619), Expect = 9e-62
 Identities = 120/212 (56%), Positives = 156/212 (73%), Gaps = 1/212 (0%)
 Frame = -3

Query: 633 SQPFFPS-SRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFSHVS 457
           S P + S S +FSS S  ++ H+   ++ +Q++ +ELLKD + + +P+ +RL+L FSHV 
Sbjct: 55  SSPLYLSLSHSFSSES--VNNHV---DQTSQSLASELLKDPDSDPLPITQRLQLSFSHVK 109

Query: 456 PTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEIL 277
           P P L+   LN S +AGRTVLGF++W+ S P F + DETISY VD+FGRRKDF  + E+L
Sbjct: 110 PNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQEVL 169

Query: 276 VDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGL 97
             G  INGPKTL SSI R  RAGR T+ +SFFE ME +YG  RDK SL+MVV  LCE+G 
Sbjct: 170 AKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCENGF 229

Query: 96  ASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
            S+AEKMVK+LANEFFPDE+ICD L+KGWCV+
Sbjct: 230 GSHAEKMVKDLANEFFPDEAICDTLIKGWCVN 261


>ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 517

 Score =  239 bits (609), Expect = 1e-60
 Identities = 118/207 (57%), Positives = 148/207 (71%)
 Frame = -3

Query: 621 FPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFSHVSPTPSL 442
           FPS   FS  S   S       ++AQ+I++ LL     E   + + L+  F +V+PTPSL
Sbjct: 52  FPSLPRFSLTSKPFSSS-SSEPQLAQSISSHLLHQPQPECADVTKTLQSSFPNVTPTPSL 110

Query: 441 LFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDGRE 262
           +  VLN S +AGR VLGF+QW+   P F + DET+SY VDYFGRRKDFK  H++++  R+
Sbjct: 111 VLSVLNLSAEAGRAVLGFNQWLIHNPRFDHTDETLSYFVDYFGRRKDFKATHDVILSSRD 170

Query: 261 INGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASYAE 82
           + GPKTLA+SIDRLVRAGR  QAVS FEKME +YG  RDKA+L++VV  LCE+G AS AE
Sbjct: 171 VAGPKTLAASIDRLVRAGRPAQAVSMFEKMEEEYGIKRDKAALRLVVEKLCEYGFASNAE 230

Query: 81  KMVKNLANEFFPDESICDLLVKGWCVD 1
           KMVK L NEFFPDE +CDLL+KGWCVD
Sbjct: 231 KMVKGLVNEFFPDEYMCDLLIKGWCVD 257


>ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
           mitochondrial-like [Cicer arietinum]
          Length = 516

 Score =  231 bits (588), Expect = 3e-58
 Identities = 120/218 (55%), Positives = 156/218 (71%), Gaps = 7/218 (3%)
 Frame = -3

Query: 633 SQPFFPSS-----RAFSS--VSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLEL 475
           S  FFP S     + FSS  VSP  +   +  + +A A++++LL + + +   + ERL L
Sbjct: 42  SPNFFPPSPLFQIKHFSSKPVSPTQTPPNE-LDPIATALSSQLLNESDSDPSSVAERLHL 100

Query: 474 HFSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFK 295
            FSH++PTP+++ Q L+ SP+AGR VLGFHQW++S P FT+ DET+SY VDYFGRR DFK
Sbjct: 101 SFSHITPTPNVILQTLDLSPEAGRIVLGFHQWLASNPKFTHTDETVSYFVDYFGRRNDFK 160

Query: 294 VIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSA 115
            + ++L  G    GPKTL S+IDRLVRA R  QAV FF++ME DYG  RD+ SLK+VV  
Sbjct: 161 AMDKVLTAGGA--GPKTLISAIDRLVRADRPNQAVQFFDRMEKDYGLTRDRGSLKVVVEK 218

Query: 114 LCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
           LC  G  SYAEKMVK+LANEFFPDE++CDLLV G+CVD
Sbjct: 219 LCLKGYGSYAEKMVKDLANEFFPDEAMCDLLVTGYCVD 256


>ref|XP_003630353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355524375|gb|AET04829.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  229 bits (583), Expect = 1e-57
 Identities = 118/219 (53%), Positives = 150/219 (68%)
 Frame = -3

Query: 657 HNLFTYVPSQPFFPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLE 478
           HN   + P   F      FSS S          + +A AI++ELLK+ + +   + +RL 
Sbjct: 46  HNRALFTPPSLF--QIEHFSSESKPEPVSTTEPDPIAIAISSELLKEPDSDPSSVTQRLN 103

Query: 477 LHFSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDF 298
           L FSH++PTP+L+ + LN S +AGR VLGFHQW++S P FT+ DET+SY VDYFGRRKDF
Sbjct: 104 LSFSHITPTPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDF 163

Query: 297 KVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVS 118
           K   +IL  G    G KTL S++DRLVRAGR +QAV FFE+ME DYG  RD++S+K+VV 
Sbjct: 164 KATDKILSGGG--GGQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVE 221

Query: 117 ALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
            LC  G ASYAEKM  +LA EFFPDE ICDLLV G+C+D
Sbjct: 222 KLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYCID 260


>gb|AFK45023.1| unknown [Medicago truncatula]
          Length = 521

 Score =  229 bits (583), Expect = 1e-57
 Identities = 118/219 (53%), Positives = 150/219 (68%)
 Frame = -3

Query: 657 HNLFTYVPSQPFFPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLE 478
           HN   + P   F      FSS S          + +A AI++ELLK+ + +   + +RL 
Sbjct: 46  HNRALFTPPSLF--QIEHFSSESKPEPVSTTEPDPIAIAISSELLKEPDSDPSSVTQRLN 103

Query: 477 LHFSHVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDF 298
           L FSH++PTP+L+ + LN S +AGR VLGFHQW++S P FT+ DET+SY VDYFGRRKDF
Sbjct: 104 LSFSHITPTPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDETLSYFVDYFGRRKDF 163

Query: 297 KVIHEILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVS 118
           K   +IL  G    G KTL S++DRLVRAGR +QAV FFE+ME DYG  RD++S+K+VV 
Sbjct: 164 KATDKILSGGG--GGQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYGLKRDRSSMKVVVE 221

Query: 117 ALCEHGLASYAEKMVKNLANEFFPDESICDLLVKGWCVD 1
            LC  G ASYAEKM  +LA EFFPDE ICDLLV G+C+D
Sbjct: 222 KLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYCID 260


>ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein PNM1,
           mitochondrial; AltName: Full=PPR PROTEIN LOCALIZED TO
           THE NUCLEUS AND MITOCHONDRIA 1; Flags: Precursor
           gi|10177319|dbj|BAB10645.1| unnamed protein product
           [Arabidopsis thaliana] gi|332010020|gb|AED97403.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 521

 Score =  223 bits (568), Expect = 7e-56
 Identities = 115/206 (55%), Positives = 143/206 (69%)
 Frame = -3

Query: 621 FPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFSHVSPTPSL 442
           FPS R FSS +   SE L  + E+A + + EL  + + ES  + +R  L FSH++P P L
Sbjct: 54  FPS-RFFSSETNAESESLD-SNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDL 111

Query: 441 LFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDGRE 262
           + Q LN SP+AGR  LGF++W+ S   F++ DET+S+ VDYFGRRKDFK + EI+   + 
Sbjct: 112 ILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKG 171

Query: 261 INGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASYAE 82
           I G KTL S+IDRLVRAGR  Q   FFEKME DYG  RDK SL +VV  LCE G AS AE
Sbjct: 172 IAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAE 231

Query: 81  KMVKNLANEFFPDESICDLLVKGWCV 4
           KMVKN ANE FPDE+ICDLL+ GWC+
Sbjct: 232 KMVKNTANEIFPDENICDLLISGWCI 257


>ref|XP_006282075.1| hypothetical protein CARUB_v10028321mg [Capsella rubella]
           gi|482550779|gb|EOA14973.1| hypothetical protein
           CARUB_v10028321mg [Capsella rubella]
          Length = 522

 Score =  221 bits (562), Expect = 4e-55
 Identities = 115/213 (53%), Positives = 144/213 (67%), Gaps = 3/213 (1%)
 Frame = -3

Query: 636 PSQPFFPSS---RAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFS 466
           PS+P   S+   R FSS +   SE      ++A + + EL  +   ES  + +R  L FS
Sbjct: 46  PSRPSIFSTFPCRFFSSETNADSES-SDPNQIALSFSKELTGNPEAESHSISQRFNLSFS 104

Query: 465 HVSPTPSLLFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIH 286
           H++P P L+ Q LN SP+AGR  LGF++W+ S  GF++ DET+SY VDYFGRRKDFK + 
Sbjct: 105 HITPNPDLILQTLNLSPEAGRAALGFNEWLDSSNGFSHTDETVSYFVDYFGRRKDFKGML 164

Query: 285 EILVDGREINGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCE 106
           EI+   + I+G KTL S+IDRLVRAGR  Q   FFEKME DYG  RDK SL +VV  LCE
Sbjct: 165 EIISKYKGISGAKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCE 224

Query: 105 HGLASYAEKMVKNLANEFFPDESICDLLVKGWC 7
            G AS AEKMVKN AN+ FPDE+ICDLL+ GWC
Sbjct: 225 KGHASIAEKMVKNTANDIFPDENICDLLISGWC 257


>gb|AAM63453.1| unknown [Arabidopsis thaliana]
          Length = 521

 Score =  220 bits (561), Expect = 5e-55
 Identities = 114/206 (55%), Positives = 142/206 (68%)
 Frame = -3

Query: 621 FPSSRAFSSVSPQISEHLKGTEEVAQAITTELLKDQNEESVPLKERLELHFSHVSPTPSL 442
           FPS R FSS +   SE L  + E+A + + EL  + + ES  + +R  L FSH++P P L
Sbjct: 54  FPS-RFFSSETNAESESLD-SNEIALSFSKELTGNPDAESQTISQRFNLSFSHITPNPDL 111

Query: 441 LFQVLNQSPDAGRTVLGFHQWVSSRPGFTNDDETISYLVDYFGRRKDFKVIHEILVDGRE 262
           + Q LN SP+AGR  LGF++W+ S   F++ DET+S+ VDYFGRRKDFK +  I+   + 
Sbjct: 112 ILQTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLGIISKYKG 171

Query: 261 INGPKTLASSIDRLVRAGRATQAVSFFEKMEMDYGFVRDKASLKMVVSALCEHGLASYAE 82
           I G KTL S+IDRLVRAGR  Q   FFEKME DYG  RDK SL +VV  LCE G AS AE
Sbjct: 172 IAGGKTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAE 231

Query: 81  KMVKNLANEFFPDESICDLLVKGWCV 4
           KMVKN ANE FPDE+ICDLL+ GWC+
Sbjct: 232 KMVKNTANEIFPDENICDLLISGWCI 257