BLASTX nr result
ID: Sinomenium22_contig00033285
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00033285 (517 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai... 80 4e-13 gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii] 59 1e-09 gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii] 60 1e-08 gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum... 64 2e-08 gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii] 60 3e-07 >gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops tauschii] Length = 950 Score = 79.7 bits (195), Expect = 4e-13 Identities = 39/53 (73%), Positives = 42/53 (79%), Gaps = 1/53 (1%) Frame = +3 Query: 6 ELSPCDLEVTGSSRGNSLLL-CKVRLRTIDPKWSDPSPGPRIRGSFMHRATFF 161 +L PCD EVTGSS GNSLLL C+ RLRTIDPKWSDPSP P GS+MHRA F Sbjct: 11 KLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAALF 63 >gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii] Length = 1176 Score = 59.3 bits (142), Expect(2) = 1e-09 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 1/45 (2%) Frame = +3 Query: 6 ELSPCDLEVTGSSRGNSLLL-CKVRLRTIDPKWSDPSPGPRIRGS 137 +L PCD EVTGSS GNSLL C+ LRTIDPKWSDP P P G+ Sbjct: 534 KLLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDPAQAGA 578 Score = 28.5 bits (62), Expect(2) = 1e-09 Identities = 11/13 (84%), Positives = 12/13 (92%) Frame = +1 Query: 118 DPAYAGASCTGLP 156 DPA AGA+CTGLP Sbjct: 572 DPAQAGATCTGLP 584 >gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii] Length = 562 Score = 60.1 bits (144), Expect(2) = 1e-08 Identities = 30/44 (68%), Positives = 32/44 (72%) Frame = +3 Query: 6 ELSPCDLEVTGSSRGNSLLLCKVRLRTIDPKWSDPSPGPRIRGS 137 +L PCD EV GSS GNSLL RLRTIDPKWSDPSP P G+ Sbjct: 360 KLLPCDHEVMGSSPGNSLLQKWERLRTIDPKWSDPSPDPAQAGA 403 Score = 24.6 bits (52), Expect(2) = 1e-08 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = +1 Query: 118 DPAYAGASCTGLPFFL 165 DPA AGA+CTG L Sbjct: 397 DPAQAGATCTGAALVL 412 >gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu] Length = 1047 Score = 63.9 bits (154), Expect = 2e-08 Identities = 34/56 (60%), Positives = 38/56 (67%), Gaps = 1/56 (1%) Frame = +3 Query: 6 ELSPCDLEVTGSSRGNSLLL-CKVRLRTIDPKWSDPSPGPRIRGSFMHRATFFFIV 170 EL PCD EVTGSS GNSLL C+ RLRTID KWSDPSP P G+ F +I+ Sbjct: 634 ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDPGQAGATCTGLPFLYIL 689 >gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii] Length = 1424 Score = 60.1 bits (144), Expect = 3e-07 Identities = 31/43 (72%), Positives = 33/43 (76%), Gaps = 1/43 (2%) Frame = -1 Query: 133 PRMRGPGEGSDHFGSIVRNLTLH-SKRLFPRLEPVTSRSHGDN 8 P G GEGSDHFGSIVR+L LH KRLFP LEPVTS S G+N Sbjct: 59 PACAGSGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQGNN 101