BLASTX nr result

ID: Sinomenium22_contig00033285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00033285
         (517 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai...    80   4e-13
gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]        59   1e-09
gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]     60   1e-08
gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum...    64   2e-08
gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             60   3e-07

>gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops
           tauschii]
          Length = 950

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 39/53 (73%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +3

Query: 6   ELSPCDLEVTGSSRGNSLLL-CKVRLRTIDPKWSDPSPGPRIRGSFMHRATFF 161
           +L PCD EVTGSS GNSLLL C+ RLRTIDPKWSDPSP P   GS+MHRA  F
Sbjct: 11  KLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAALF 63


>gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]
          Length = 1176

 Score = 59.3 bits (142), Expect(2) = 1e-09
 Identities = 30/45 (66%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = +3

Query: 6   ELSPCDLEVTGSSRGNSLLL-CKVRLRTIDPKWSDPSPGPRIRGS 137
           +L PCD EVTGSS GNSLL  C+  LRTIDPKWSDP P P   G+
Sbjct: 534 KLLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDPAQAGA 578



 Score = 28.5 bits (62), Expect(2) = 1e-09
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 118 DPAYAGASCTGLP 156
           DPA AGA+CTGLP
Sbjct: 572 DPAQAGATCTGLP 584


>gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]
          Length = 562

 Score = 60.1 bits (144), Expect(2) = 1e-08
 Identities = 30/44 (68%), Positives = 32/44 (72%)
 Frame = +3

Query: 6   ELSPCDLEVTGSSRGNSLLLCKVRLRTIDPKWSDPSPGPRIRGS 137
           +L PCD EV GSS GNSLL    RLRTIDPKWSDPSP P   G+
Sbjct: 360 KLLPCDHEVMGSSPGNSLLQKWERLRTIDPKWSDPSPDPAQAGA 403



 Score = 24.6 bits (52), Expect(2) = 1e-08
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 118 DPAYAGASCTGLPFFL 165
           DPA AGA+CTG    L
Sbjct: 397 DPAQAGATCTGAALVL 412


>gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu]
          Length = 1047

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/56 (60%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 6   ELSPCDLEVTGSSRGNSLLL-CKVRLRTIDPKWSDPSPGPRIRGSFMHRATFFFIV 170
           EL PCD EVTGSS GNSLL  C+ RLRTID KWSDPSP P   G+      F +I+
Sbjct: 634 ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDPGQAGATCTGLPFLYIL 689


>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 31/43 (72%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
 Frame = -1

Query: 133 PRMRGPGEGSDHFGSIVRNLTLH-SKRLFPRLEPVTSRSHGDN 8
           P   G GEGSDHFGSIVR+L LH  KRLFP LEPVTS S G+N
Sbjct: 59  PACAGSGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQGNN 101


Top