BLASTX nr result
ID: Sinomenium22_contig00033200
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00033200
(372 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002880263.1| hypothetical protein ARALYDRAFT_346489 [Arab... 57 3e-10
ref|NP_182201.4| RNA-binding (RRM/RBD/RNP motifs) family protein... 57 4e-10
gb|AAC33496.1| putative RNA-binding protein [Arabidopsis thaliana] 57 4e-10
ref|XP_006294599.1| hypothetical protein CARUB_v10023635mg [Caps... 57 2e-09
ref|XP_006444735.1| hypothetical protein CICLE_v10021586mg [Citr... 63 5e-08
gb|EXC32488.1| RNA-binding protein 38 [Morus notabilis] 62 6e-08
ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isofo... 62 8e-08
ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isofo... 62 8e-08
ref|XP_003540599.1| PREDICTED: RNA-binding protein 24-like isofo... 62 8e-08
ref|XP_003534424.1| PREDICTED: RNA-binding protein 24-like isofo... 62 8e-08
ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isofo... 62 1e-07
ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isofo... 62 1e-07
ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citr... 62 1e-07
ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citr... 62 1e-07
ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257... 62 1e-07
ref|XP_002301439.2| hypothetical protein POPTR_0002s17990g [Popu... 61 1e-07
ref|XP_007051437.1| RNA-binding family protein isoform 2 [Theobr... 61 2e-07
ref|XP_007051436.1| RNA-binding family protein isoform 1 [Theobr... 61 2e-07
gb|EMT18764.1| RNA-binding protein 24 [Aegilops tauschii] 60 3e-07
gb|EMS45722.1| RNA-binding protein 38 [Triticum urartu] 60 3e-07
>ref|XP_002880263.1| hypothetical protein ARALYDRAFT_346489 [Arabidopsis lyrata subsp.
lyrata] gi|297326102|gb|EFH56522.1| hypothetical protein
ARALYDRAFT_346489 [Arabidopsis lyrata subsp. lyrata]
Length = 334
Score = 57.4 bits (137), Expect(2) = 3e-10
Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPST-PRYYG 255
AAMRACQ+ PVIDGRR NCNLACLGA + P T PR+ G
Sbjct: 76 AAMRACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHGG 115
Score = 32.7 bits (73), Expect(2) = 3e-10
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1
Query: 165 RFVGKGSFRXXXXXXXXXXXXXSYEGSSMAYF----QQQLAYYAFPYSSYGYNGCSQD 4
R G G FR + GSS + QQ + FPYS+YG++G SQ+
Sbjct: 112 RHGGTGRFRSPGSGVGLVAPSPQFRGSSSSSAFVPQQQHTGQFPFPYSTYGFSGYSQE 169
>ref|NP_182201.4| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|63003880|gb|AAY25469.1| At2g46780
[Arabidopsis thaliana] gi|330255657|gb|AEC10751.1|
RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 336
Score = 56.6 bits (135), Expect(2) = 4e-10
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAMRACQ+ PVIDGRR NCNLACLGA + P T +G
Sbjct: 75 AAMRACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHG 113
Score = 33.1 bits (74), Expect(2) = 4e-10
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -1
Query: 156 GKGSFRXXXXXXXXXXXXXSYEGSSMAYF------QQQLAYYAFPYSSYGYNGCSQD 4
G G FR + GSS + QQ A + FPYS+YG++G SQ+
Sbjct: 113 GTGRFRSPGSGVGLVAPSPQFRGSSSSSAFVHQQQQQHTAQFPFPYSTYGFSGYSQE 169
>gb|AAC33496.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 304
Score = 56.6 bits (135), Expect(2) = 4e-10
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAMRACQ+ PVIDGRR NCNLACLGA + P T +G
Sbjct: 75 AAMRACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHG 113
Score = 33.1 bits (74), Expect(2) = 4e-10
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 6/57 (10%)
Frame = -1
Query: 156 GKGSFRXXXXXXXXXXXXXSYEGSSMAYF------QQQLAYYAFPYSSYGYNGCSQD 4
G G FR + GSS + QQ A + FPYS+YG++G SQ+
Sbjct: 113 GTGRFRSPGSGVGLVAPSPQFRGSSSSSAFVHQQQQQHTAQFPFPYSTYGFSGYSQE 169
>ref|XP_006294599.1| hypothetical protein CARUB_v10023635mg [Capsella rubella]
gi|565473918|ref|XP_006294600.1| hypothetical protein
CARUB_v10023635mg [Capsella rubella]
gi|482563307|gb|EOA27497.1| hypothetical protein
CARUB_v10023635mg [Capsella rubella]
gi|482563308|gb|EOA27498.1| hypothetical protein
CARUB_v10023635mg [Capsella rubella]
Length = 324
Score = 57.4 bits (137), Expect(2) = 2e-09
Identities = 28/40 (70%), Positives = 31/40 (77%), Gaps = 1/40 (2%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPST-PRYYG 255
AAMRACQ+ PVIDGRR NCNLACLGA + P T PR+ G
Sbjct: 77 AAMRACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHGG 116
Score = 30.0 bits (66), Expect(2) = 2e-09
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Frame = -1
Query: 165 RFVGKGSFRXXXXXXXXXXXXXSYEGSSMAYF------QQQLAYYAFPYSSYGYNGCSQD 4
R G G FR + GSS + QQ + FPY +YG++G SQ+
Sbjct: 113 RHGGAGRFRSPGSGVGLVAPSPQFRGSSSSSAFVHQQQQQHTGQFPFPYPAYGFSGYSQE 172
>ref|XP_006444735.1| hypothetical protein CICLE_v10021586mg [Citrus clementina]
gi|568876592|ref|XP_006491361.1| PREDICTED: RNA-binding
protein 24-like [Citrus sinensis]
gi|557546997|gb|ESR57975.1| hypothetical protein
CICLE_v10021586mg [Citrus clementina]
Length = 278
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAMRACQ+P PVIDGRR NCNLA LGA++T P TP++ G
Sbjct: 77 AAMRACQNPSPVIDGRRANCNLASLGAHKTRPPTPQHGG 115
>gb|EXC32488.1| RNA-binding protein 38 [Morus notabilis]
Length = 300
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/37 (75%), Positives = 31/37 (83%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRY 261
AAMRAC DP PVIDGRR NCNLA LGA R+ PSTP++
Sbjct: 69 AAMRACVDPAPVIDGRRANCNLASLGAQRSKPSTPKH 105
>ref|XP_006591951.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
Length = 272
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAMRAC DP PVIDGRR NCNLA LG R+ PSTP++ G
Sbjct: 69 AAMRACVDPAPVIDGRRANCNLASLGVQRSKPSTPKHGG 107
>ref|XP_006587725.1| PREDICTED: RNA-binding protein 24-like isoform X2 [Glycine max]
Length = 272
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAMRAC DP PVIDGRR NCNLA LG R+ PSTP++ G
Sbjct: 69 AAMRACVDPAPVIDGRRANCNLASLGVQRSKPSTPKHGG 107
>ref|XP_003540599.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Glycine max]
Length = 267
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAMRAC DP PVIDGRR NCNLA LG R+ PSTP++ G
Sbjct: 69 AAMRACVDPAPVIDGRRANCNLASLGVQRSKPSTPKHGG 107
>ref|XP_003534424.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Glycine max]
Length = 266
Score = 62.0 bits (149), Expect = 8e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAMRAC DP PVIDGRR NCNLA LG R+ PSTP++ G
Sbjct: 69 AAMRACVDPAPVIDGRRANCNLASLGVQRSKPSTPKHGG 107
>ref|XP_006478309.1| PREDICTED: RNA-binding protein 24-like isoform X4 [Citrus sinensis]
Length = 279
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAM+AC D PVIDGRR NCNLACLG R+ PSTP++ G
Sbjct: 76 AAMKACVDAAPVIDGRRANCNLACLGVQRSKPSTPKHGG 114
>ref|XP_006478306.1| PREDICTED: RNA-binding protein 24-like isoform X1 [Citrus sinensis]
gi|568849099|ref|XP_006478307.1| PREDICTED: RNA-binding
protein 24-like isoform X2 [Citrus sinensis]
Length = 286
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAM+AC D PVIDGRR NCNLACLG R+ PSTP++ G
Sbjct: 76 AAMKACVDAAPVIDGRRANCNLACLGVQRSKPSTPKHGG 114
>ref|XP_006441812.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849105|ref|XP_006478310.1| PREDICTED: RNA-binding
protein 24-like isoform X5 [Citrus sinensis]
gi|557544074|gb|ESR55052.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 278
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAM+AC D PVIDGRR NCNLACLG R+ PSTP++ G
Sbjct: 76 AAMKACVDAAPVIDGRRANCNLACLGVQRSKPSTPKHGG 114
>ref|XP_006441811.1| hypothetical protein CICLE_v10021520mg [Citrus clementina]
gi|568849101|ref|XP_006478308.1| PREDICTED: RNA-binding
protein 24-like isoform X3 [Citrus sinensis]
gi|557544073|gb|ESR55051.1| hypothetical protein
CICLE_v10021520mg [Citrus clementina]
Length = 285
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYYG 255
AAM+AC D PVIDGRR NCNLACLG R+ PSTP++ G
Sbjct: 76 AAMKACVDAAPVIDGRRANCNLACLGVQRSKPSTPKHGG 114
>ref|XP_002267504.2| PREDICTED: uncharacterized protein LOC100257521 [Vitis vinifera]
gi|296089004|emb|CBI38707.3| unnamed protein product
[Vitis vinifera]
Length = 267
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRY 261
AAMRACQ+P PVIDGRR NCNLA LGA++T P TP++
Sbjct: 69 AAMRACQNPSPVIDGRRANCNLASLGAHKTRPPTPQH 105
>ref|XP_002301439.2| hypothetical protein POPTR_0002s17990g [Populus trichocarpa]
gi|550345259|gb|EEE80712.2| hypothetical protein
POPTR_0002s17990g [Populus trichocarpa]
Length = 293
Score = 61.2 bits (147), Expect = 1e-07
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRY 261
AAMRACQ+P PVIDGRR NCNLA LGA +T P TP++
Sbjct: 77 AAMRACQNPSPVIDGRRANCNLASLGAQKTRPPTPQH 113
>ref|XP_007051437.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508703698|gb|EOX95594.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 315
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRY 261
AAMRACQ+P P+IDGRR NCNLA LGA +T P TP++
Sbjct: 77 AAMRACQNPSPIIDGRRANCNLASLGAQKTRPPTPQH 113
>ref|XP_007051436.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508703697|gb|EOX95593.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 314
Score = 60.8 bits (146), Expect = 2e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRY 261
AAMRACQ+P P+IDGRR NCNLA LGA +T P TP++
Sbjct: 77 AAMRACQNPSPIIDGRRANCNLASLGAQKTRPPTPQH 113
>gb|EMT18764.1| RNA-binding protein 24 [Aegilops tauschii]
Length = 314
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYY 258
AAMRAC DPYPVIDGRR NCNLACLG R+ P Y
Sbjct: 68 AAMRACLDPYPVIDGRRANCNLACLGVQRSKAPQPLPY 105
>gb|EMS45722.1| RNA-binding protein 38 [Triticum urartu]
Length = 344
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/38 (71%), Positives = 28/38 (73%)
Frame = -2
Query: 371 AAMRACQDPYPVIDGRRTNCNLACLGANRTGPSTPRYY 258
AAMRAC DPYPVIDGRR NCNLACLG R+ P Y
Sbjct: 68 AAMRACLDPYPVIDGRRANCNLACLGVQRSKAPQPLPY 105