BLASTX nr result
ID: Sinomenium22_contig00033182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00033182
(715 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containi... 83 1e-13
ref|XP_007010458.1| Pentatricopeptide repeat-containing protein ... 69 2e-09
ref|XP_007010456.1| Pentatricopeptide repeat-containing protein ... 69 2e-09
ref|XP_006605717.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containi... 68 3e-09
ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containi... 65 2e-08
ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-08
ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containi... 63 9e-08
ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containi... 63 1e-07
ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containi... 63 1e-07
ref|XP_002316488.2| hypothetical protein POPTR_0010s24770g [Popu... 62 2e-07
gb|EXB55868.1| Pentatricopeptide repeat-containing protein [Moru... 61 4e-07
ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containi... 61 4e-07
ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containi... 61 4e-07
ref|XP_007214817.1| hypothetical protein PRUPE_ppa018727m2g, par... 59 1e-06
ref|XP_007145390.1| hypothetical protein PHAVU_007G234900g [Phas... 59 2e-06
gb|EYU19829.1| hypothetical protein MIMGU_mgv1a000898mg [Mimulus... 58 3e-06
gb|EYU19828.1| hypothetical protein MIMGU_mgv1a000898mg [Mimulus... 58 3e-06
ref|XP_004960011.1| PREDICTED: pentatricopeptide repeat-containi... 57 6e-06
>ref|XP_006485466.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Citrus sinensis]
Length = 948
Score = 82.8 bits (203), Expect = 1e-13
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDED 534
RKIERTGGELTEALQKTFPP W+S ++L+ +N +++ ++GDD +Y G+ D+D
Sbjct: 872 RKIERTGGELTEALQKTFPPDWSSHQSLDANSNSDTDNEAHVSGDDGDLYFAGGTTDDDD 931
Query: 533 SYENSNQVDDHK 498
++N N DD K
Sbjct: 932 DHDNDNNNDDFK 943
>ref|XP_007010458.1| Pentatricopeptide repeat-containing protein isoform 3 [Theobroma
cacao] gi|508727371|gb|EOY19268.1| Pentatricopeptide
repeat-containing protein isoform 3 [Theobroma cacao]
Length = 915
Score = 68.9 bits (167), Expect = 2e-09
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDED 534
RKIERTGGELTEALQKTFPP W+S+ + ++ D+ E + DD+ VY + + GD D
Sbjct: 845 RKIERTGGELTEALQKTFPPDWSSYHTIAANSDTETDDELESDHDDNDVYFANVTEGDHD 904
Query: 533 SYENS 519
E++
Sbjct: 905 LDEDA 909
>ref|XP_007010456.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao] gi|508727369|gb|EOY19266.1| Pentatricopeptide
repeat-containing protein isoform 1 [Theobroma cacao]
Length = 944
Score = 68.9 bits (167), Expect = 2e-09
Identities = 32/65 (49%), Positives = 44/65 (67%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDED 534
RKIERTGGELTEALQKTFPP W+S+ + ++ D+ E + DD+ VY + + GD D
Sbjct: 874 RKIERTGGELTEALQKTFPPDWSSYHTIAANSDTETDDELESDHDDNDVYFANVTEGDHD 933
Query: 533 SYENS 519
E++
Sbjct: 934 LDEDA 938
>ref|XP_006605717.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X2 [Glycine max]
Length = 931
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKD---DSEMNGDDDGVYSEDGSNG 543
RKIERTGGELTEALQKTFPP WTS L+V + D D E +DD Y+ +G N
Sbjct: 860 RKIERTGGELTEALQKTFPPDWTSHNVLDVNSETETADLQIDDEDEDEDDVHYNVNGINN 919
Query: 542 DEDSYENSNQV 510
D+D ++ +
Sbjct: 920 DDDDTDDDTVI 930
>ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X1 [Glycine max]
Length = 932
Score = 67.8 bits (164), Expect = 3e-09
Identities = 35/71 (49%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKD---DSEMNGDDDGVYSEDGSNG 543
RKIERTGGELTEALQKTFPP WTS L+V + D D E +DD Y+ +G N
Sbjct: 861 RKIERTGGELTEALQKTFPPDWTSHNVLDVNSETETADLQIDDEDEDEDDVHYNVNGINN 920
Query: 542 DEDSYENSNQV 510
D+D ++ +
Sbjct: 921 DDDDTDDDTVI 931
>ref|XP_004514863.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cicer arietinum]
Length = 947
Score = 65.5 bits (158), Expect = 2e-08
Identities = 34/63 (53%), Positives = 39/63 (61%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDED 534
RKIERTGGELTEALQKTFPP W S L V + D DDD VY GS+ DE
Sbjct: 875 RKIERTGGELTEALQKTFPPDWISHNILAVNCEIESADPEIAAADDDIVYYSSGSDNDEC 934
Query: 533 SYE 525
+++
Sbjct: 935 THD 937
>ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Glycine max]
Length = 918
Score = 64.3 bits (155), Expect = 4e-08
Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 4/65 (6%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNG----DDDGVYSEDGSN 546
RKIERTGGELTEALQKTFPP WTS L+V + + D +++ +DD Y +G N
Sbjct: 851 RKIERTGGELTEALQKTFPPDWTSHNALDVNSGETQTADLQIDDEDEYEDDVHYIVNGVN 910
Query: 545 GDEDS 531
D+D+
Sbjct: 911 DDDDA 915
>ref|XP_006367245.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Solanum tuberosum]
Length = 944
Score = 63.2 bits (152), Expect = 9e-08
Identities = 32/62 (51%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGD-DDGVYSEDGSNGDE 537
RKIERTGG+LTEALQKTFPP W S NL +N + N D DDG + E S+ +
Sbjct: 880 RKIERTGGDLTEALQKTFPPDWNSHRNLNAASNDTGNTGASDNDDYDDGPFYETDSDDET 939
Query: 536 DS 531
+S
Sbjct: 940 NS 941
>ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like, partial [Cucumis sativus]
Length = 564
Score = 62.8 bits (151), Expect = 1e-07
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = -3
Query: 710 KIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDG--SNGDE 537
KIERTGGE+TEALQKTFPP W + N +N + D+S+++ D+D ++G SN +
Sbjct: 491 KIERTGGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGD 550
Query: 536 DSYENSNQVDDHKFWF 489
D + + V + WF
Sbjct: 551 DGESDGDVVG--RSWF 564
>ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Cucumis sativus]
Length = 962
Score = 62.8 bits (151), Expect = 1e-07
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Frame = -3
Query: 710 KIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDG--SNGDE 537
KIERTGGE+TEALQKTFPP W + N +N + D+S+++ D+D ++G SN +
Sbjct: 889 KIERTGGEITEALQKTFPPNWNVYNNTLTNSNIDSDDESDISDDEDDDICQEGASSNAGD 948
Query: 536 DSYENSNQVDDHKFWF 489
D + + V + WF
Sbjct: 949 DGESDGDVVG--RSWF 962
>ref|XP_002316488.2| hypothetical protein POPTR_0010s24770g [Populus trichocarpa]
gi|550330544|gb|EEF02659.2| hypothetical protein
POPTR_0010s24770g [Populus trichocarpa]
Length = 947
Score = 62.0 bits (149), Expect = 2e-07
Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDD----GVYSEDGSN 546
RKIER GGELT+ LQKTFPP W + +LE D+ ++GD+D GV DG +
Sbjct: 871 RKIERIGGELTQTLQKTFPPDWNTHHSLEANHESDINDEPSIHGDNDMFLAGVNDGDGDD 930
Query: 545 GDEDSYEN 522
D+D +++
Sbjct: 931 EDDDHHDS 938
>gb|EXB55868.1| Pentatricopeptide repeat-containing protein [Morus notabilis]
Length = 946
Score = 60.8 bits (146), Expect = 4e-07
Identities = 36/70 (51%), Positives = 47/70 (67%), Gaps = 2/70 (2%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYS--EDGSNGD 540
RKIER GGELTEALQKTFPP W LEV T+ ++ DD N D+ +YS + SNGD
Sbjct: 880 RKIERGGGELTEALQKTFPPDWNISHGLEV-TSDIDSDDEIDN--DNEIYSAVDTDSNGD 936
Query: 539 EDSYENSNQV 510
DS + ++++
Sbjct: 937 GDSDDMNHRL 946
>ref|XP_004250470.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like [Solanum lycopersicum]
Length = 932
Score = 60.8 bits (146), Expect = 4e-07
Identities = 31/62 (50%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGD-DDGVYSEDGSNGDE 537
RKIERTGG LTEALQKTFPP W S N +N + N D DDG + E S+ D
Sbjct: 869 RKIERTGGNLTEALQKTFPPDWNSHRNPNAASNNTGNTEGSDNDDYDDGPFYETDSDDDT 928
Query: 536 DS 531
++
Sbjct: 929 NA 930
>ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic [Vitis vinifera]
Length = 929
Score = 60.8 bits (146), Expect = 4e-07
Identities = 32/61 (52%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKT-NQMNKDDSEMNGDDDGVYSEDGSNGDE 537
RKIERTGGELTEALQKTFPP W S+ N+ V + ++++ DD+ G+ D +D N D+
Sbjct: 866 RKIERTGGELTEALQKTFPPDWNSY-NIHVNSDDELDVDDAYSGGETD--TDDDDDNDDD 922
Query: 536 D 534
D
Sbjct: 923 D 923
>ref|XP_007214817.1| hypothetical protein PRUPE_ppa018727m2g, partial [Prunus persica]
gi|462410682|gb|EMJ16016.1| hypothetical protein
PRUPE_ppa018727m2g, partial [Prunus persica]
Length = 168
Score = 59.3 bits (142), Expect = 1e-06
Identities = 31/70 (44%), Positives = 44/70 (62%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDED 534
RKIERTGGELTEALQKTFPP W+S L+V ++ + D+ ++ +DD +
Sbjct: 104 RKIERTGGELTEALQKTFPPDWSSSHTLDVSSDVDSDDELDIISNDDDM----------- 152
Query: 533 SYENSNQVDD 504
E +N++DD
Sbjct: 153 --EFANRIDD 160
>ref|XP_007145390.1| hypothetical protein PHAVU_007G234900g [Phaseolus vulgaris]
gi|561018580|gb|ESW17384.1| hypothetical protein
PHAVU_007G234900g [Phaseolus vulgaris]
Length = 897
Score = 58.9 bits (141), Expect = 2e-06
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDD 573
RKIERTGGELTEALQKTFPP WTS L+V ++ D E++ DDD
Sbjct: 845 RKIERTGGELTEALQKTFPPDWTSHNVLDV-NSKTETADLEIDDDDD 890
>gb|EYU19829.1| hypothetical protein MIMGU_mgv1a000898mg [Mimulus guttatus]
Length = 945
Score = 58.2 bits (139), Expect = 3e-06
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDED 534
RKIER+GG +TEA+Q+TFPP W S + L ++ N D + +GDDD D + ED
Sbjct: 876 RKIERSGGGITEAVQRTFPPDWNSHKTLTAISDVSNDDSDDDDGDDDDSGFRDSDSDGED 935
>gb|EYU19828.1| hypothetical protein MIMGU_mgv1a000898mg [Mimulus guttatus]
Length = 948
Score = 58.2 bits (139), Expect = 3e-06
Identities = 27/60 (45%), Positives = 37/60 (61%)
Frame = -3
Query: 713 RKIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDED 534
RKIER+GG +TEA+Q+TFPP W S + L ++ N D + +GDDD D + ED
Sbjct: 879 RKIERSGGGITEAVQRTFPPDWNSHKTLTAISDVSNDDSDDDDGDDDDSGFRDSDSDGED 938
>ref|XP_004960011.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X1 [Setaria italica]
gi|514741919|ref|XP_004960012.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g04810,
chloroplastic-like isoform X2 [Setaria italica]
Length = 893
Score = 57.0 bits (136), Expect = 6e-06
Identities = 31/61 (50%), Positives = 40/61 (65%)
Frame = -3
Query: 710 KIERTGGELTEALQKTFPPAWTSFENLEVKTNQMNKDDSEMNGDDDGVYSEDGSNGDEDS 531
KIERTGG LTEALQ+ FPP W S ENLE +N ++ DSE D D +S++ + D D
Sbjct: 836 KIERTGGALTEALQRIFPPDWNSSENLEA-SNSVSDGDSESCTDSD--FSDNDDDHDIDG 892
Query: 530 Y 528
+
Sbjct: 893 H 893