BLASTX nr result
ID: Sinomenium22_contig00032336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00032336
(262 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264... 110 2e-22
ref|XP_007037997.1| Uncharacterized protein isoform 2, partial [... 100 3e-19
ref|XP_007037996.1| Uncharacterized protein isoform 1 [Theobroma... 100 3e-19
ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II tra... 99 5e-19
ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II tra... 99 6e-19
ref|XP_006581863.1| PREDICTED: mediator of RNA polymerase II tra... 96 4e-18
ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II tra... 96 4e-18
gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis] 95 1e-17
ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citr... 95 1e-17
ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arab... 94 2e-17
dbj|BAD43384.1| unknown protein [Arabidopsis thaliana] 94 3e-17
ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana] ... 94 3e-17
gb|AAM62832.1| unknown [Arabidopsis thaliana] 94 3e-17
ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Caps... 93 3e-17
gb|EYU29203.1| hypothetical protein MIMGU_mgv1a013715mg [Mimulus... 93 4e-17
ref|XP_007137904.1| hypothetical protein PHAVU_009G165600g [Phas... 91 1e-16
ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Popu... 91 2e-16
ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II tra... 90 3e-16
ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II tra... 88 1e-15
ref|XP_007223516.1| hypothetical protein PRUPE_ppa011908mg [Prun... 87 2e-15
>ref|XP_002283991.1| PREDICTED: uncharacterized protein LOC100264705 [Vitis vinifera]
gi|147789866|emb|CAN73869.1| hypothetical protein
VITISV_001275 [Vitis vinifera]
gi|297734439|emb|CBI15686.3| unnamed protein product
[Vitis vinifera]
Length = 174
Score = 110 bits (275), Expect = 2e-22
Identities = 60/94 (63%), Positives = 70/94 (74%), Gaps = 7/94 (7%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWS------TVAAPQSSNGVNGSTDA-FSHTS 103
+G KHLE+TIE+AFQILSSMNDELCNP LWS T A+ SS +NG + FSH
Sbjct: 15 EGQKHLEETIESAFQILSSMNDELCNPTLWSTPPPPATAASSHSSASLNGDASSDFSHHM 74
Query: 102 ADMGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
GGGALD ARLRYKS+V+SLR+VLNAI S+QK
Sbjct: 75 EIAGGGALDDARLRYKSSVASLRAVLNAIQSSQK 108
>ref|XP_007037997.1| Uncharacterized protein isoform 2, partial [Theobroma cacao]
gi|508775242|gb|EOY22498.1| Uncharacterized protein
isoform 2, partial [Theobroma cacao]
Length = 142
Score = 100 bits (248), Expect = 3e-19
Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 26/113 (23%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSHTSA------ 100
+G+KHLE+TIEAAFQILSSMNDELCNPALWST+ P SSN S+ ++T+A
Sbjct: 25 EGLKHLEETIEAAFQILSSMNDELCNPALWSTI--PSSSNSTTASSTTTANTAAPNGPSS 82
Query: 99 --------------DMGG------GALDVARLRYKSAVSSLRSVLNAINSAQK 1
+MGG GALD ARLRYK++V+SLR+VL AI ++QK
Sbjct: 83 LSNGDSASDGGHHLEMGGIGGSGNGALDEARLRYKNSVASLRAVLAAIPNSQK 135
>ref|XP_007037996.1| Uncharacterized protein isoform 1 [Theobroma cacao]
gi|508775241|gb|EOY22497.1| Uncharacterized protein
isoform 1 [Theobroma cacao]
Length = 198
Score = 100 bits (248), Expect = 3e-19
Identities = 59/113 (52%), Positives = 74/113 (65%), Gaps = 26/113 (23%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSHTSA------ 100
+G+KHLE+TIEAAFQILSSMNDELCNPALWST+ P SSN S+ ++T+A
Sbjct: 25 EGLKHLEETIEAAFQILSSMNDELCNPALWSTI--PSSSNSTTASSTTTANTAAPNGPSS 82
Query: 99 --------------DMGG------GALDVARLRYKSAVSSLRSVLNAINSAQK 1
+MGG GALD ARLRYK++V+SLR+VL AI ++QK
Sbjct: 83 LSNGDSASDGGHHLEMGGIGGSGNGALDEARLRYKNSVASLRAVLAAIPNSQK 135
>ref|XP_004244509.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Solanum lycopersicum]
Length = 198
Score = 99.4 bits (246), Expect = 5e-19
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 28/115 (24%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGV--------------NG-- 130
+G KHLEDTIEAA QILS+MNDELCNP+LWST+ +S+ V NG
Sbjct: 19 EGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAAASSAVAVAGGGVGASGVLSNGQQ 78
Query: 129 -------STDAFSHTSA-----DMGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
S+D S +SA D+GGGALD +RLRYKS+++SLRSVL AI+++QK
Sbjct: 79 HHTNGDISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAISNSQK 133
>ref|XP_006357075.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Solanum tuberosum]
gi|565381437|ref|XP_006357076.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like isoform
X2 [Solanum tuberosum]
Length = 198
Score = 99.0 bits (245), Expect = 6e-19
Identities = 61/115 (53%), Positives = 76/115 (66%), Gaps = 28/115 (24%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTV-----------------AAPQSSNG-- 139
+G KHLEDTIEAA QILS+MNDELCNP+LWST+ A+ SNG
Sbjct: 19 EGQKHLEDTIEAAHQILSAMNDELCNPSLWSTLNTAASSASASAAGGGVGASAVLSNGQQ 78
Query: 138 --VNG--STDAFSHTSA-----DMGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
NG S+D S +SA D+GGGALD +RLRYKS+++SLRSVL AI+++QK
Sbjct: 79 LHTNGDISSDTSSSSSASAQHLDIGGGALDESRLRYKSSIASLRSVLTAISNSQK 133
>ref|XP_006581863.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X2 [Glycine max]
Length = 139
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 5/92 (5%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSH-----TSAD 97
+G K+LE+TIE AFQILSSMNDELCNP LWST + SS + +++ +H T+A
Sbjct: 15 EGQKYLEETIENAFQILSSMNDELCNPVLWSTSPSASSSPNADATSENSNHHADATTAAA 74
Query: 96 MGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
GGGAL+ AR RYK AV++LR++L AI ++QK
Sbjct: 75 GGGGALEQARSRYKKAVAALRTILTAIPNSQK 106
>ref|XP_003526951.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like isoform X1 [Glycine max]
Length = 168
Score = 96.3 bits (238), Expect = 4e-18
Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 5/92 (5%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSH-----TSAD 97
+G K+LE+TIE AFQILSSMNDELCNP LWST + SS + +++ +H T+A
Sbjct: 15 EGQKYLEETIENAFQILSSMNDELCNPVLWSTSPSASSSPNADATSENSNHHADATTAAA 74
Query: 96 MGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
GGGAL+ AR RYK AV++LR++L AI ++QK
Sbjct: 75 GGGGALEQARSRYKKAVAALRTILTAIPNSQK 106
>gb|EXB25243.1| hypothetical protein L484_010110 [Morus notabilis]
Length = 200
Score = 94.7 bits (234), Expect = 1e-17
Identities = 60/112 (53%), Positives = 72/112 (64%), Gaps = 25/112 (22%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWS---TVAAPQSSNG---------------V 136
+G KHLEDTIE+AFQILSSMNDELCNPALWS TVAA SS+ V
Sbjct: 23 EGQKHLEDTIESAFQILSSMNDELCNPALWSTTTTVAAATSSSSPSSAANGPSSHSNGLV 82
Query: 135 NGSTDAF-SHTSADMG------GGALDVARLRYKSAVSSLRSVLNAINSAQK 1
NG A SH AD+G GGAL A+ RYK+AV+SLR++L AI ++Q+
Sbjct: 83 NGDAAASDSHHHADLGGGGGAAGGALGEAQFRYKNAVASLRAILAAIPNSQR 134
>ref|XP_006436855.1| hypothetical protein CICLE_v10032864mg [Citrus clementina]
gi|568880628|ref|XP_006493212.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Citrus
sinensis] gi|557539051|gb|ESR50095.1| hypothetical
protein CICLE_v10032864mg [Citrus clementina]
Length = 183
Score = 94.7 bits (234), Expect = 1e-17
Identities = 53/95 (55%), Positives = 68/95 (71%), Gaps = 8/95 (8%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWS--TVAAPQSSNGV---NGSTDAFSH---T 106
+G KHLE+TIEAAFQILSSMNDELCNP LWS T +SNGV + ++DA +H +
Sbjct: 23 EGQKHLEETIEAAFQILSSMNDELCNPTLWSTTTTTTTSTSNGVVHADSTSDANNHHLDS 82
Query: 105 SADMGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
S G ALD AR RYK++V++LR+VL AI ++ K
Sbjct: 83 SGGSGNSALDEARHRYKTSVAALRAVLTAIPNSHK 117
>ref|XP_002864848.1| hypothetical protein ARALYDRAFT_496535 [Arabidopsis lyrata subsp.
lyrata] gi|297310683|gb|EFH41107.1| hypothetical protein
ARALYDRAFT_496535 [Arabidopsis lyrata subsp. lyrata]
Length = 178
Score = 94.0 bits (232), Expect = 2e-17
Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 20/107 (18%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 118
+G KHLE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 9 EGEKHLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATATGSNGSALVSVDAAAIDG 68
Query: 117 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVLNAINSAQK 1
SH S GGG LD A LRYK++V+SLR+VL AI ++ K
Sbjct: 69 TSHHSESGGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPNSHK 115
>dbj|BAD43384.1| unknown protein [Arabidopsis thaliana]
Length = 184
Score = 93.6 bits (231), Expect = 3e-17
Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 20/107 (18%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 118
+G K LE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 15 EGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDG 74
Query: 117 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVLNAINSAQK 1
SH S GGG LD A LRYK++V+SLR+VL AI ++QK
Sbjct: 75 TSHHSESAGGGGGEGSGNSVLDEASLRYKNSVTSLRAVLAAIPNSQK 121
>ref|NP_568973.1| uncharacterized protein [Arabidopsis thaliana]
gi|75171739|sp|Q9FMV4.1|MED30_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
30 gi|9758289|dbj|BAB08813.1| unnamed protein product
[Arabidopsis thaliana] gi|190886513|gb|ACE95179.1|
At1g17730 [Arabidopsis thaliana]
gi|332010374|gb|AED97757.1| uncharacterized protein
AT5G63480 [Arabidopsis thaliana]
Length = 189
Score = 93.6 bits (231), Expect = 3e-17
Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 20/107 (18%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 118
+G K LE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 20 EGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDG 79
Query: 117 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVLNAINSAQK 1
SH S GGG LD A LRYK++V+SLR+VL AI ++QK
Sbjct: 80 TSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPNSQK 126
>gb|AAM62832.1| unknown [Arabidopsis thaliana]
Length = 178
Score = 93.6 bits (231), Expect = 3e-17
Identities = 56/107 (52%), Positives = 68/107 (63%), Gaps = 20/107 (18%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS---SNGVNGST---------DA 118
+G K LE+TIEAAFQI+S+MNDELCNP+LWST A P S + G NGS D
Sbjct: 9 EGEKQLEETIEAAFQIISAMNDELCNPSLWSTSATPSSAATTTGSNGSALVSADAAAIDG 68
Query: 117 FSHTSADMGGG--------ALDVARLRYKSAVSSLRSVLNAINSAQK 1
SH S GGG LD A LRYK++V+SLR+VL AI ++QK
Sbjct: 69 TSHHSESAGGGGGGGSGNSVLDEASLRYKNSVTSLRAVLAAIPNSQK 115
>ref|XP_006281191.1| hypothetical protein CARUB_v10027226mg [Capsella rubella]
gi|482549895|gb|EOA14089.1| hypothetical protein
CARUB_v10027226mg [Capsella rubella]
Length = 177
Score = 93.2 bits (230), Expect = 3e-17
Identities = 56/106 (52%), Positives = 69/106 (65%), Gaps = 19/106 (17%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQS----SNGVNGST---------D 121
+G KHLE+TIEAAFQI+S+MNDELCNP+LWST A S + G NG+ D
Sbjct: 9 EGEKHLEETIEAAFQIISAMNDELCNPSLWSTSATASSAMATTTGSNGTALVSADAAAID 68
Query: 120 AFSHTSADMGGG------ALDVARLRYKSAVSSLRSVLNAINSAQK 1
SH S GGG ALD A LRYK++V+SLR+VL AI ++QK
Sbjct: 69 ETSHHSESGGGGGGSGNSALDEASLRYKNSVTSLRAVLAAIPNSQK 114
>gb|EYU29203.1| hypothetical protein MIMGU_mgv1a013715mg [Mimulus guttatus]
Length = 212
Score = 92.8 bits (229), Expect = 4e-17
Identities = 56/120 (46%), Positives = 69/120 (57%), Gaps = 33/120 (27%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTV---------------AAPQSSNGVNGS 127
+G HLE+TI+AAF ILS+MNDELCNP+LWST A+ NG +
Sbjct: 28 EGQNHLEETIDAAFLILSAMNDELCNPSLWSTTSTAANPSTTHLGGGGASASVGNGHQLN 87
Query: 126 TDAFS------------------HTSADMGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
D S H S D+GGGALD ARL+YKS+V+SLRSVL AI++AQK
Sbjct: 88 GDVLSDSSSASSSASASQSHPQNHNSFDIGGGALDEARLQYKSSVASLRSVLTAISAAQK 147
>ref|XP_007137904.1| hypothetical protein PHAVU_009G165600g [Phaseolus vulgaris]
gi|561010991|gb|ESW09898.1| hypothetical protein
PHAVU_009G165600g [Phaseolus vulgaris]
Length = 181
Score = 91.3 bits (225), Expect = 1e-16
Identities = 51/98 (52%), Positives = 67/98 (68%), Gaps = 11/98 (11%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWS-----TVAAPQSSNGVNGSTDAFSHTSAD 97
+G K+LE+TIE AFQILSSMNDELCNP LWS T A+P + + ST S+ +D
Sbjct: 22 EGQKYLEETIEFAFQILSSMNDELCNPVLWSTSPSATSASPNAPSATADSTSDNSNLHSD 81
Query: 96 M------GGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
GGAL+ ARLRYK+AV++LR++L AI ++QK
Sbjct: 82 SATVSAGAGGALEEARLRYKNAVAALRTILTAIPNSQK 119
>ref|XP_002318134.1| hypothetical protein POPTR_0012s10100g [Populus trichocarpa]
gi|118486707|gb|ABK95190.1| unknown [Populus
trichocarpa] gi|222858807|gb|EEE96354.1| hypothetical
protein POPTR_0012s10100g [Populus trichocarpa]
Length = 185
Score = 90.5 bits (223), Expect = 2e-16
Identities = 53/102 (51%), Positives = 66/102 (64%), Gaps = 15/102 (14%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALW-------STVAAP-QSSNGVNGSTDAFSHT 106
+G KHLE+TI+AA+QILSSMNDELCNP LW STV +P SSN NG +A
Sbjct: 25 EGQKHLEETIQAAYQILSSMNDELCNPTLWSTTSTSTSTVTSPITSSNAQNGDANAAVSD 84
Query: 105 S-------ADMGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
S +G GALD AR RYK++V++LR VL AI ++ K
Sbjct: 85 STLELNGGGGVGNGALDEARFRYKNSVAALRDVLAAIPNSHK 126
>ref|XP_003522437.2| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Glycine max]
Length = 174
Score = 90.1 bits (222), Expect = 3e-16
Identities = 47/92 (51%), Positives = 66/92 (71%), Gaps = 5/92 (5%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVAAPQSSNGVNGSTDAFSH-----TSAD 97
+G ++LE+TIE AFQILSSMNDELCNP LWST +P +S + ++D +H ++
Sbjct: 23 EGQEYLEETIENAFQILSSMNDELCNPVLWST--SPSTSPNADATSDNSNHHADASAASA 80
Query: 96 MGGGALDVARLRYKSAVSSLRSVLNAINSAQK 1
GGAL+ AR RYK AV++LR++L AI ++QK
Sbjct: 81 AAGGALEEARARYKKAVTALRTILTAIPTSQK 112
>ref|XP_004138044.1| PREDICTED: mediator of RNA polymerase II transcription subunit
30-like [Cucumis sativus]
gi|449532651|ref|XP_004173294.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 30-like [Cucumis
sativus]
Length = 198
Score = 87.8 bits (216), Expect = 1e-15
Identities = 53/114 (46%), Positives = 74/114 (64%), Gaps = 27/114 (23%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWS-------------TVAAP-----QSSNGV 136
+G+KHLE+TIE+AFQIL SMNDELCNP LWS T+A+P S+NGV
Sbjct: 21 EGIKHLEETIESAFQILYSMNDELCNPTLWSTTSSTATTATSGLTIASPSGPSSHSANGV 80
Query: 135 ---NGSTDAFSHTSADMG------GGALDVARLRYKSAVSSLRSVLNAINSAQK 1
+ S+++ SH + G GGAL+ AR+RYK++V +LR++L AI ++QK
Sbjct: 81 VNGDASSESTSHHTDSSGGGGSGSGGALEEARVRYKNSVLALRAILAAIPNSQK 134
>ref|XP_007223516.1| hypothetical protein PRUPE_ppa011908mg [Prunus persica]
gi|462420452|gb|EMJ24715.1| hypothetical protein
PRUPE_ppa011908mg [Prunus persica]
Length = 191
Score = 87.0 bits (214), Expect = 2e-15
Identities = 51/109 (46%), Positives = 65/109 (59%), Gaps = 22/109 (20%)
Frame = -2
Query: 261 DGMKHLEDTIEAAFQILSSMNDELCNPALWSTVA------------APQSSNGVNGSTDA 118
+G KHLE+TIEAAFQILSSMNDELCNP LWST + AP ++ NG + +
Sbjct: 18 EGQKHLEETIEAAFQILSSMNDELCNPTLWSTTSSFSAATNIANGPAPHANGVNNGDSSS 77
Query: 117 FSHTSADMG----------GGALDVARLRYKSAVSSLRSVLNAINSAQK 1
+TS G GGAL+ AR RY ++V LR+VL I ++QK
Sbjct: 78 SDNTSTHHGDLIGAGGSGTGGALEEARHRYTNSVRLLRAVLTTIPNSQK 126