BLASTX nr result
ID: Sinomenium22_contig00032301
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00032301
(509 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p... 90 4e-16
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p... 90 4e-16
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ... 90 4e-16
ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Popu... 89 6e-16
gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Mor... 87 2e-15
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora] 84 2e-14
ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr... 82 1e-13
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr... 82 1e-13
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin... 82 1e-13
emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera] 82 1e-13
ref|XP_007157071.1| hypothetical protein PHAVU_002G0404000g, par... 81 1e-13
ref|XP_006391982.1| hypothetical protein EUTSA_v10023969mg, part... 81 2e-13
ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III s... 81 2e-13
ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutr... 80 3e-13
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 80 3e-13
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s... 80 3e-13
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s... 80 3e-13
emb|CBI17549.3| unnamed protein product [Vitis vinifera] 80 3e-13
ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III s... 80 4e-13
ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prun... 80 4e-13
>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
[Theobroma cacao] gi|508699254|gb|EOX91150.1|
Transcription regulators,zinc ion binding, putative
isoform 3 [Theobroma cacao]
Length = 736
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/65 (66%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
QL VLQYPLRP WRPY+LD+RC EVR KP S +VE+DL++DVD NNYD+ A +++TKQ
Sbjct: 138 QLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQ 197
Query: 488 TLTSS 502
TL+SS
Sbjct: 198 TLSSS 202
>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
[Theobroma cacao] gi|508699253|gb|EOX91149.1|
Transcription regulators,zinc ion binding, putative
isoform 2 [Theobroma cacao]
Length = 588
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/65 (66%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
QL VLQYPLRP WRPY+LD+RC EVR KP S +VE+DL++DVD NNYD+ A +++TKQ
Sbjct: 41 QLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQ 100
Query: 488 TLTSS 502
TL+SS
Sbjct: 101 TLSSS 105
>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
gi|508699252|gb|EOX91148.1| SIN-like family protein,
putative isoform 1 [Theobroma cacao]
Length = 700
Score = 89.7 bits (221), Expect = 4e-16
Identities = 43/65 (66%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
QL VLQYPLRP WRPY+LD+RC EVR KP S +VE+DL++DVD NNYD+ A +++TKQ
Sbjct: 138 QLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLKMTKQ 197
Query: 488 TLTSS 502
TL+SS
Sbjct: 198 TLSSS 202
>ref|XP_002310208.2| hypothetical protein POPTR_0007s12540g [Populus trichocarpa]
gi|550334731|gb|EEE90658.2| hypothetical protein
POPTR_0007s12540g [Populus trichocarpa]
Length = 667
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/64 (62%), Positives = 51/64 (79%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDNNYDTSVAENMRITKQT 490
QL V+QYPLRP WRPY+LD+RC+EVR KP+S +VEVDLS+D NYD +A + + KQT
Sbjct: 128 QLYVMQYPLRPCWRPYELDERCKEVRVKPESTEVEVDLSIDDTKNYDPDIASRLNMKKQT 187
Query: 491 LTSS 502
L+SS
Sbjct: 188 LSSS 191
>gb|EXB77882.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
Length = 732
Score = 87.0 bits (214), Expect = 2e-15
Identities = 42/65 (64%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDN-NYDTSVAENMRITKQ 487
QL VLQYPLRP WRPY+LD+RC EVR KP S +VE+DLSLDVD+ NYD + + +TKQ
Sbjct: 127 QLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPDCGDRLNMTKQ 186
Query: 488 TLTSS 502
TL S
Sbjct: 187 TLCCS 191
>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
Length = 643
Score = 84.3 bits (207), Expect = 2e-14
Identities = 42/65 (64%), Positives = 51/65 (78%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDN-NYDTSVAENMRITKQ 487
+L VLQYPLRP WRPY+LD RC EVR K KS +VEVDL++DVD+ NYD+ + +TKQ
Sbjct: 124 KLYVLQYPLRPLWRPYELDDRCEEVRVKCKSAEVEVDLAVDVDSKNYDSDADPRVSMTKQ 183
Query: 488 TLTSS 502
TLTSS
Sbjct: 184 TLTSS 188
>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
RNA polymerase III subunit RPC5-like [Citrus sinensis]
gi|557527707|gb|ESR38957.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 690
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/65 (56%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
+L V+QYPLRP WRPY+LD+RC EVR KP + +VE+DLS+DVD NN+D+ A + + KQ
Sbjct: 130 KLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKASRLSMPKQ 189
Query: 488 TLTSS 502
TL+++
Sbjct: 190 TLSTT 194
>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
gi|557527706|gb|ESR38956.1| hypothetical protein
CICLE_v10025048mg [Citrus clementina]
Length = 637
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/65 (56%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
+L V+QYPLRP WRPY+LD+RC EVR KP + +VE+DLS+DVD NN+D+ A + + KQ
Sbjct: 130 KLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKASRLSMPKQ 189
Query: 488 TLTSS 502
TL+++
Sbjct: 190 TLSTT 194
>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 677
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDNNYDTSVAENMRITKQT 490
QL V+QYPLRP WRPY+LD+RC EVR KP+S +VEVDL++D +N+D + A KQT
Sbjct: 134 QLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEVDLTIDDSSNWDPAQASKYNFKKQT 193
Query: 491 LTSS 502
L++S
Sbjct: 194 LSTS 197
>emb|CAN60111.1| hypothetical protein VITISV_023619 [Vitis vinifera]
Length = 282
Score = 81.6 bits (200), Expect = 1e-13
Identities = 40/65 (61%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDN-NYDTSVAENMRITKQ 487
++ VLQYPLRP WRPY+L +RC EVR KP S +VEVDLS+DVD+ NYD V R+ KQ
Sbjct: 120 KIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDVPNAQRMKKQ 179
Query: 488 TLTSS 502
TL++S
Sbjct: 180 TLSTS 184
>ref|XP_007157071.1| hypothetical protein PHAVU_002G0404000g, partial [Phaseolus
vulgaris] gi|561030486|gb|ESW29065.1| hypothetical
protein PHAVU_002G0404000g, partial [Phaseolus vulgaris]
Length = 363
Score = 81.3 bits (199), Expect = 1e-13
Identities = 40/68 (58%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
QL V QYPLRP WRPYD+D RC+EVR P+S +VE+DL +D++ NN DT A +TKQ
Sbjct: 132 QLFVFQYPLRPNWRPYDIDDRCQEVRLNPESSEVELDLPIDLESNNIDTEFASKYNVTKQ 191
Query: 488 TL-TSSKP 508
T TS KP
Sbjct: 192 TYGTSWKP 199
>ref|XP_006391982.1| hypothetical protein EUTSA_v10023969mg, partial [Eutrema
salsugineum] gi|557088488|gb|ESQ29268.1| hypothetical
protein EUTSA_v10023969mg, partial [Eutrema salsugineum]
Length = 468
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/65 (55%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDV-DNNYDTSVAENMRITKQ 487
+L VLQYPLRP WRPY++D+RC EVR P + QVEVDLS+++ NYD+ + +TKQ
Sbjct: 116 KLYVLQYPLRPSWRPYEMDERCEEVRVNPSTSQVEVDLSMNIHSRNYDSKFGSKLHLTKQ 175
Query: 488 TLTSS 502
TLT++
Sbjct: 176 TLTTT 180
>ref|XP_003573633.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Brachypodium distachyon]
Length = 663
Score = 80.9 bits (198), Expect = 2e-13
Identities = 36/65 (55%), Positives = 53/65 (81%), Gaps = 1/65 (1%)
Frame = +2
Query: 314 LCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDN-NYDTSVAENMRITKQT 490
L ++QYPLRP WRPY+L++ C+EVR KP+ +VEVDL +D D+ NYD+ V+ + ++TKQT
Sbjct: 124 LYIMQYPLRPCWRPYELNEICKEVRVKPRCSKVEVDLDIDTDSGNYDSDVSSSSKLTKQT 183
Query: 491 LTSSK 505
L+SS+
Sbjct: 184 LSSSE 188
>ref|XP_006395054.1| hypothetical protein EUTSA_v10003751mg [Eutrema salsugineum]
gi|557091693|gb|ESQ32340.1| hypothetical protein
EUTSA_v10003751mg [Eutrema salsugineum]
Length = 682
Score = 80.1 bits (196), Expect = 3e-13
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDV-DNNYDTSVAENMRITKQ 487
+L VLQYPLRP WRPY++D+RC VR P + QVE+DLS+DV NYD+ + +TKQ
Sbjct: 131 KLYVLQYPLRPSWRPYEMDERCEAVRVNPSTSQVEIDLSMDVHSRNYDSKFGSELHMTKQ 190
Query: 488 TLTSS 502
TLT++
Sbjct: 191 TLTTT 195
>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
subunit RPC5-like [Cucumis sativus]
Length = 702
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
+L VLQYPLRPRWRPY+ + RC EVR KP + +VEVDL++D++ NNYD ++ KQ
Sbjct: 137 KLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKADGTFQMKKQ 196
Query: 488 TLTSS 502
TLTSS
Sbjct: 197 TLTSS 201
>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Cucumis sativus]
Length = 702
Score = 80.1 bits (196), Expect = 3e-13
Identities = 38/65 (58%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
+L VLQYPLRPRWRPY+ + RC EVR KP + +VEVDL++D++ NNYD ++ KQ
Sbjct: 137 KLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEVEVDLNVDIESNNYDNKADGTFQMKKQ 196
Query: 488 TLTSS 502
TLTSS
Sbjct: 197 TLTSS 201
>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
vinifera]
Length = 672
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDN-NYDTSVAENMRITKQ 487
++ VLQYPLRP WRPY+L +RC EVR KP S +VEVDLS+DVD+ NYD R+ KQ
Sbjct: 120 KIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQ 179
Query: 488 TLTSS 502
TL++S
Sbjct: 180 TLSTS 184
>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 80.1 bits (196), Expect = 3e-13
Identities = 39/65 (60%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDN-NYDTSVAENMRITKQ 487
++ VLQYPLRP WRPY+L +RC EVR KP S +VEVDLS+DVD+ NYD R+ KQ
Sbjct: 120 KIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDLSIDVDSKNYDPDAPNAQRMKKQ 179
Query: 488 TLTSS 502
TL++S
Sbjct: 180 TLSTS 184
>ref|XP_006590438.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5-like
[Glycine max]
Length = 697
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/65 (56%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVDNNY-DTSVAENMRITKQ 487
QL V QYPLRP WRPYDLD++C EVR K K+ +VE+DLS+D+D+++ D A ITKQ
Sbjct: 127 QLYVFQYPLRPSWRPYDLDEQCEEVRLKTKTSEVEIDLSIDLDSDHIDKEFATKYNITKQ 186
Query: 488 TLTSS 502
TL+++
Sbjct: 187 TLSTT 191
>ref|XP_007201935.1| hypothetical protein PRUPE_ppa002228mg [Prunus persica]
gi|462397466|gb|EMJ03134.1| hypothetical protein
PRUPE_ppa002228mg [Prunus persica]
Length = 698
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 QLCVLQYPLRPRWRPYDLDQRCREVRWKPKSFQVEVDLSLDVD-NNYDTSVAENMRITKQ 487
QL VLQYPLRP WRPY+L+ RC EVR KP + ++E+DLSL++D NYD +++TKQ
Sbjct: 127 QLYVLQYPLRPWWRPYELENRCEEVRLKPATSEMEIDLSLNLDPKNYDEDCGNRLKMTKQ 186
Query: 488 TL-TSSKP 508
TL T+ KP
Sbjct: 187 TLYTTWKP 194