BLASTX nr result

ID: Sinomenium22_contig00032255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00032255
         (3573 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...   960   0.0  
emb|CBI21003.3| unnamed protein product [Vitis vinifera]              951   0.0  
ref|XP_002309609.2| pentatricopeptide repeat-containing family p...   891   0.0  
ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, par...   880   0.0  
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,...   879   0.0  
ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein...   876   0.0  
ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citr...   860   0.0  
ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containi...   855   0.0  
gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]     848   0.0  
ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [A...   822   0.0  
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ...   802   0.0  
gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus...   776   0.0  
ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containi...   763   0.0  
ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containi...   753   0.0  
ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containi...   749   0.0  
ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containi...   704   0.0  
ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phas...   679   0.0  
ref|XP_002876279.1| pentatricopeptide repeat-containing protein ...   659   0.0  
ref|XP_002879788.1| pentatricopeptide repeat-containing protein ...   658   0.0  
ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Caps...   657   0.0  

>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  960 bits (2481), Expect = 0.0
 Identities = 486/841 (57%), Positives = 630/841 (74%), Gaps = 6/841 (0%)
 Frame = -3

Query: 3061 ESLSSETFDSEVGFPDESSSKNGFLEQC--RSGFSKDCCSEDSRHVQSRKILSQIEQEIA 2888
            E L   T +S   FP++ + K  F E+    S F  +  S   R+ Q     SQI QE  
Sbjct: 37   EILEKSTSESLTHFPEDPNPKANFPEKISPESSFPGNSSSPYPRYSQDTVPTSQIHQETT 96

Query: 2887 SHRSDSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS--N 2714
                   L+Q+HVI+ LL + +DP+SAL+YFK AE QRGF+RGVDA C+ LHILM+S   
Sbjct: 97   P------LSQNHVIDALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPET 150

Query: 2713 IKSARYLLNQCXXXXXXXXXXXXVDHLLETSKRCPS--DNRLFSYVLNSYIQAGRIEDAA 2540
               AR LLN+             VDHL+  +KR     D+R+F+Y+LN+YI+A RIE+A 
Sbjct: 151  HGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAI 210

Query: 2539 ECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHAC 2360
            +CF  +I  D++P +   NILLTALVR +M G+  DL+ +M+++G+  D FT+ VM+ AC
Sbjct: 211  DCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRAC 270

Query: 2359 LKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSE 2180
            LKEG+ E+AE+YFRE K RGV+LDA  Y+ +I AVCKKP+S    ELL+EMK++ W+PSE
Sbjct: 271  LKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSE 330

Query: 2179 FAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQ 2000
              +++VI AC+ QGN VEALRLK+E++      NLV+ATSLMK YC QG+LD ALNL+ +
Sbjct: 331  ATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNK 390

Query: 1999 MIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQF 1820
            + E G+ PNKVT+SVLIEGC  +GN+ KA ELY QM+  GIPP+VF +NSL+RG+LK   
Sbjct: 391  ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPL 450

Query: 1819 WEEAMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHL 1640
            WEEA +LFDE+V+C VAN+FTYNI++ WLCK G+M EAC+L D M+N+G++P+VVSYN +
Sbjct: 451  WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 1639 ILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRI 1460
            ILG+CR GNMD+A   F++ML R +KPNV+TYS L+DG FKKGD E+A  + +QML+  I
Sbjct: 511  ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 1459 APNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALA 1280
            AP DFTFNTIINGL K G+ SEA + LK F+ EGFIP+CMT+NSI+DGFIKEG++D+ALA
Sbjct: 571  APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630

Query: 1279 IYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFC 1100
            +Y+EM   GV PNVVTYTSLI+GFCK N+IDLALK R E+R +GLELD+ AYSALIDGFC
Sbjct: 631  VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFC 690

Query: 1099 KIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLA 920
            K  +M  A D+F ELL+VGL PN  VYNS+I+GFR+L+NMEAA+  Y +M N+ IPCDL 
Sbjct: 691  KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 750

Query: 919  TYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEM 740
            TYTTLID  L+ G L+FAS+LY EML+KGI PD  T+ VL+ GLCNKGQLE AR++L+EM
Sbjct: 751  TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 810

Query: 739  NRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAP 560
            +RKN   +VLIYNTLIAGYF++GNL+EAF LHDEML+RGLVPD+ T DIL+N KF+ +  
Sbjct: 811  DRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRS 870

Query: 559  L 557
            L
Sbjct: 871  L 871


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  951 bits (2458), Expect = 0.0
 Identities = 480/826 (58%), Positives = 621/826 (75%), Gaps = 5/826 (0%)
 Frame = -3

Query: 3019 PDESSSKNGF-LEQCRSGFSKDCCSEDSRHVQSRKILSQIEQEIASHRSDSVLTQDHVIE 2843
            P+ +    GF      S F  +  S   R+ Q     SQI QE         L+Q+HVI+
Sbjct: 12   PNHNRGPVGFKFNSFESSFPGNSSSPYPRYSQDTVPTSQIHQETTP------LSQNHVID 65

Query: 2842 VLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS--NIKSARYLLNQCXXXX 2669
             LL + +DP+SAL+YFK AE QRGF+RGVDA C+ LHILM+S      AR LLN+     
Sbjct: 66   ALLCHVNDPQSALRYFKRAETQRGFIRGVDAYCVLLHILMRSPETHGHARKLLNRYVSGD 125

Query: 2668 XXXXXXXXVDHLLETSKRCPS--DNRLFSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRI 2495
                    VDHL+  +KR     D+R+F+Y+LN+YI+A RIE+A +CF  +I  D++P +
Sbjct: 126  SDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWV 185

Query: 2494 IDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKAEQYFRE 2315
               NILLTALVR +M G+  DL+ +M+++G+  D FT+ VM+ ACLKEG+ E+AE+YFRE
Sbjct: 186  PYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRE 245

Query: 2314 MKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGACLKQGN 2135
             K RGV+LDA  Y+ +I AVCKKP+S    ELL+EMK++ W+PSE  +++VI AC+ QGN
Sbjct: 246  TKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGN 305

Query: 2134 TVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSV 1955
             VEALRLK+E++      NLV+ATSLMK YC QG+LD ALNL+ ++ E G+ PNKVT+SV
Sbjct: 306  MVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSV 365

Query: 1954 LIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECK 1775
            LIEGC  +GN+ KA ELY QM+  GIPP+VF +NSL+RG+LK   WEEA +LFDE+V+C 
Sbjct: 366  LIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG 425

Query: 1774 VANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVK 1595
            VAN+FTYNI++ WLCK G+M EAC+L D M+N+G++P+VVSYN +ILG+CR GNMD+A  
Sbjct: 426  VANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASS 485

Query: 1594 AFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLS 1415
             F++ML R +KPNV+TYS L+DG FKKGD E+A  + +QML+  IAP DFTFNTIINGL 
Sbjct: 486  VFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLC 545

Query: 1414 KSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVV 1235
            K G+ SEA + LK F+ EGFIP+CMT+NSI+DGFIKEG++D+ALA+Y+EM   GV PNVV
Sbjct: 546  KVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVV 605

Query: 1234 TYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSEL 1055
            TYTSLI+GFCK N+IDLALK R E+R +GLELD+ AYSALIDGFCK  +M  A D+F EL
Sbjct: 606  TYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFEL 665

Query: 1054 LDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNL 875
            L+VGL PN  VYNS+I+GFR+L+NMEAA+  Y +M N+ IPCDL TYTTLID  L+ G L
Sbjct: 666  LEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRL 725

Query: 874  LFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTL 695
            +FAS+LY EML+KGI PD  T+ VL+ GLCNKGQLE AR++L+EM+RKN   +VLIYNTL
Sbjct: 726  VFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTL 785

Query: 694  IAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPL 557
            IAGYF++GNL+EAF LHDEML+RGLVPD+ T DIL+N KF+ +  L
Sbjct: 786  IAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 831


>ref|XP_002309609.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550337148|gb|EEE93132.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 841

 Score =  891 bits (2303), Expect = 0.0
 Identities = 445/770 (57%), Positives = 576/770 (74%), Gaps = 4/770 (0%)
 Frame = -3

Query: 2875 DSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKSN--IKSA 2702
            DS LTQ   I+ LLN+Q+DP+SAL YF WA ++RG ++ VDALC+ LHIL KS      A
Sbjct: 59   DSFLTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKA 118

Query: 2701 RYLLNQCXXXXXXXXXXXXVDHLLETSKRCP--SDNRLFSYVLNSYIQAGRIEDAAECFG 2528
            R LLN+             V  L+E+S+R    SD+R+F+Y+LNSY++  RI DA +CF 
Sbjct: 119  RNLLNRFASDDWGPVPSVVVSRLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFN 178

Query: 2527 RLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEG 2348
             LI  DIVP +   NI L+ LV+ +M  +A D++ +M  KG+  DC T+ VM+ A ++EG
Sbjct: 179  SLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREG 238

Query: 2347 KPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYS 2168
            K E+AE +FRE K +GVELDA  Y+ VI AVCKKPDS AA  LL+EM+DK W+P E  ++
Sbjct: 239  KLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFT 298

Query: 2167 NVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIES 1988
             VIG C+KQG  +EA+++K E++      N+V+AT+LMK YC QGDLD AL L+ +M E+
Sbjct: 299  RVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNEN 358

Query: 1987 GVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEA 1808
            G+ PN VT++V+IE C +NGN+ KAYE+Y QM+   I PTVF +NSLIRG+LK +  EEA
Sbjct: 359  GICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEA 418

Query: 1807 MRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGY 1628
             +LFDE+V C +ANVFTYN LL WLCKEG+M+EAC++W+KM+ +GV PSVVSYN++ILG+
Sbjct: 419  SKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGH 478

Query: 1627 CRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPND 1448
            C+ G+MD A   F EMLE+G+KPN+ITYS LMDGYFKKGD E AF + ++M    IAP+D
Sbjct: 479  CQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSD 538

Query: 1447 FTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQE 1268
            FT N IINGL K+G+TSE+ + LK  + EGFIPTCMT+N IIDGF+KEGS+++ALA+Y E
Sbjct: 539  FTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTE 598

Query: 1267 MPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGN 1088
            M   GV PNV TYT+LI+GFCK N +DLALK+  E++ +G+ELD+  Y ALIDGFC+ G+
Sbjct: 599  MCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGD 658

Query: 1087 MRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTT 908
            M  A  + SEL +VGL PN  VY+S+I+GFR L NMEAA+ L+ RM NEGIPCDL  YTT
Sbjct: 659  MVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTT 718

Query: 907  LIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKN 728
            LI   L+ G LLFASELY EML KGI PD  TY+VLI GLCNKGQLE A+++L++M+RK 
Sbjct: 719  LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778

Query: 727  TPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSK 578
                V IYNTLI G+FK+GNLQEAFRLH+EML++GLVPD+TT DILVN K
Sbjct: 779  MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGK 828



 Score =  103 bits (258), Expect = 4e-19
 Identities = 66/301 (21%), Positives = 135/301 (44%)
 Frame = -3

Query: 1441 FNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMP 1262
            FN ++N   K+ + ++A +     + +  +P     N  +   +K   +  A  +Y +M 
Sbjct: 157  FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 1261 AQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMR 1082
            ++GV  +  T + +I    ++ +++ A     E + +G+ELD  AYS +I+  CK  +  
Sbjct: 217  SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 1081 GAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLI 902
             A  +  E+ D G +P+  ++                                   T +I
Sbjct: 277  AALGLLREMRDKGWVPHEVIF-----------------------------------TRVI 301

Query: 901  DVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTP 722
             V ++ G +L A ++  EML+ G   +    T L+KG C +G L++A E+ D+MN     
Sbjct: 302  GVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGIC 361

Query: 721  SNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVGNSA 542
             N + Y  +I    K+GN+ +A+ ++++M  + + P    ++ L+    +  +P   +  
Sbjct: 362  PNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKL 421

Query: 541  F 539
            F
Sbjct: 422  F 422


>ref|XP_007206864.1| hypothetical protein PRUPE_ppa1027201mg, partial [Prunus persica]
            gi|462402506|gb|EMJ08063.1| hypothetical protein
            PRUPE_ppa1027201mg, partial [Prunus persica]
          Length = 782

 Score =  880 bits (2273), Expect = 0.0
 Identities = 440/780 (56%), Positives = 583/780 (74%), Gaps = 4/780 (0%)
 Frame = -3

Query: 2872 SVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHIL--MKSNIKSAR 2699
            S LTQ  VI  LL+++ +P SALK+F WAEK+RGF++GVDA C+ LHIL   +     A+
Sbjct: 1    SELTQTKVISTLLSHRSEPNSALKHFIWAEKERGFLKGVDAFCVLLHILTGFEETHVRAQ 60

Query: 2698 YLLNQCXXXXXXXXXXXXVDHLLETSKRCPSD--NRLFSYVLNSYIQAGRIEDAAECFGR 2525
             LLNQ              D L++ +KR   +  +R+FSY+LNSY++A RI+ A +CF R
Sbjct: 61   ILLNQYASGDSGPSQQVFFDRLVDCAKRFDFELESRVFSYLLNSYVRANRIKYAIDCFDR 120

Query: 2524 LIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGK 2345
            +I  ++ P +   NILL  LVR  M   A +L+ +M+++G+  D  TL VMMHACLKEG+
Sbjct: 121  MIELELYPCVTCMNILLVELVRRKMIVNARELYDKMVLRGMGGDRATLRVMMHACLKEGQ 180

Query: 2344 PEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSN 2165
            P KAE+YFR+ + RG+ELDAA++   I AVC KP+ R A ELLKEM++  W+PS   +++
Sbjct: 181  PNKAEEYFRQARARGIELDAASHGVAIQAVCSKPNLRLALELLKEMREMGWVPSVGTFTS 240

Query: 2164 VIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESG 1985
            VI AC+KQGN VEALR+KDE+V      NLV+ATSLMK YCVQG+L+ AL+L+  +IE G
Sbjct: 241  VIKACVKQGNMVEALRIKDEMVSCGNSINLVVATSLMKGYCVQGNLESALDLFNIIIEDG 300

Query: 1984 VSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAM 1805
            +SP KV ++VLIE C  NGN+ KAYELY QM+ M I P VF +N+L+RGFLK +  E+A 
Sbjct: 301  LSPKKVMYAVLIEYCCHNGNMEKAYELYVQMKNMDILPDVFIVNNLVRGFLKYRSLEDAC 360

Query: 1804 RLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYC 1625
            +LFDE+VEC VANVF YN +L WLC EG+++EAC+LWDKM+  GV+P++VSYN +I GYC
Sbjct: 361  KLFDEAVECSVANVFLYNNILSWLCGEGKVSEACSLWDKMLYNGVVPNLVSYNSMIHGYC 420

Query: 1624 RLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDF 1445
            R+GNM+ A   F E+LERG+KPNV TYS L+ GYF+KGD+++A  V N M+  +I P +F
Sbjct: 421  RIGNMERAHNVFLELLERGLKPNVFTYSILIKGYFRKGDIKRALDVFNDMVAAKITPTEF 480

Query: 1444 TFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEM 1265
            T N +I+GL K+G TSEA++ L   +  GF+P CM++N+IIDGFIKEG+M++ALA+Y+EM
Sbjct: 481  TVNIVIDGLCKAGCTSEASDRLNKIVERGFVPGCMSYNNIIDGFIKEGAMNSALAVYREM 540

Query: 1264 PAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNM 1085
               GV PNVVTYTS ++GFCK NQIDLAL+M  +++ +G++LD+ AY ALIDGFCK  +M
Sbjct: 541  REGGVSPNVVTYTSFVNGFCKSNQIDLALQMWNDMKKKGIKLDVTAYCALIDGFCKRRDM 600

Query: 1084 RGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTL 905
              A  +FSE L+VGL P+TAVY+S+I GF+NL+NMEAA+ L+ +M +EGIPCDL  YTTL
Sbjct: 601  GTARKLFSEFLEVGLSPSTAVYSSMIWGFQNLNNMEAALDLHKKMISEGIPCDLKAYTTL 660

Query: 904  IDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNT 725
            ID  L+ G L  A++LY+EML K I PD  TYTVLI GLCNKGQLE AR++L++MN+++ 
Sbjct: 661  IDGLLKRGELQVATDLYSEMLQKKIVPDIKTYTVLINGLCNKGQLENARKILEDMNKRSM 720

Query: 724  PSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVGNS 545
              +V IY+TLIAG FK+GNLQEAFRLHDEML+RGLVPD+ T DILVN KFE    LVG S
Sbjct: 721  TPSVHIYSTLIAGNFKEGNLQEAFRLHDEMLDRGLVPDDITYDILVNGKFEGANALVGTS 780


>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 927

 Score =  879 bits (2272), Expect = 0.0
 Identities = 461/861 (53%), Positives = 612/861 (71%), Gaps = 9/861 (1%)
 Frame = -3

Query: 3097 RTENTSPQEPSF---ESLSSETFDSEVGFPDESSSKNGFLEQCRSGFS-KDCCSEDSRHV 2930
            R+  TS   P F     ++ ++  S+  FP+E  S     +     FS  +  S+DS   
Sbjct: 2    RSSLTSSPIPQFFIRSFINPKSLCSQPQFPNEPQSS--LYQNSYPNFSYAEKNSQDSNFS 59

Query: 2929 QSRKILSQIEQEIASHRS-DSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVD 2753
            ++   L   + E+    S DSVL + +VI+ LL+ + DP SAL YFK  E  RGFVR +D
Sbjct: 60   ENLIFLKSRQVELTKPASQDSVLARTNVIDTLLSYKRDPYSALTYFKQLECTRGFVRSLD 119

Query: 2752 ALCITLHILMKSN--IKSARYLLNQCXXXXXXXXXXXXVDHLLETSKRCP--SDNRLFSY 2585
            +LC+ LHIL +S+  +K A+ LLN+             VDH + ++KR    SD R+++Y
Sbjct: 120  SLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIRIYNY 179

Query: 2584 VLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKG 2405
            +LNSYI+A ++ DA  CF RL+  DIVP I   N LLTALV+ DM  +A +++++M++KG
Sbjct: 180  LLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMVLKG 239

Query: 2404 LSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAAC 2225
            +  DCFT+ +MM A LK+   E+A+++F E K+RGV+LDAA Y+ VI A CK  D   AC
Sbjct: 240  VHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELAC 299

Query: 2224 ELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAY 2045
             LLK+M+DK W+PSE  +++VIGAC+KQGN VEALRLKDE+V   +  N+V+AT+L+K Y
Sbjct: 300  GLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359

Query: 2044 CVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTV 1865
            C Q  L  AL  + +M E+G SPN+VT++VLIE C +NGN+ KAY+LY QM+   I PTV
Sbjct: 360  CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419

Query: 1864 FTLNSLIRGFLKDQFWEEAMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKM 1685
            F +NSLIRGFLK +  EEA +LFDE+V C +AN+FTYN LL WLCKEG+M+EA  LW KM
Sbjct: 420  FIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKM 479

Query: 1684 MNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDV 1505
            +++G+ P+ VSYN +ILG+CR GN+D+A   F++ML+ G+KPNVITYS LMDGYFK GD 
Sbjct: 480  LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDT 539

Query: 1504 EQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSI 1325
            E AF V ++M++  I P+DFT+N  INGL K G+TSEA +MLK F+ +GF+P C+T+NSI
Sbjct: 540  EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 1324 IDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGL 1145
            +DGFIKEGS+ +AL  Y+EM   GV PNV+TYT+LI+GFCK N  DLALKMR E+R +GL
Sbjct: 600  MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGL 659

Query: 1144 ELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMS 965
            ELD+ AY ALIDGFCK  ++  A  +FSELLD GL PN+ +YNSLI+G+RNL+NMEAA++
Sbjct: 660  ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN 719

Query: 964  LYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLC 785
            L  RM  EGI CDL TYTTLID  L+ G L+ A +LY+EM  KGI PD   YTVLI GLC
Sbjct: 720  LQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLC 779

Query: 784  NKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNT 605
             KGQLE A+++L EM R +   NV IYN LIAG+FK GNLQEAFRLH+EML++GL P++T
Sbjct: 780  GKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDT 839

Query: 604  TLDILVNSKFEQEAPLVGNSA 542
            T DIL+N K +      GNSA
Sbjct: 840  TYDILINGKIKG-----GNSA 855



 Score =  296 bits (759), Expect = 4e-77
 Identities = 187/639 (29%), Positives = 325/639 (50%), Gaps = 2/639 (0%)
 Frame = -3

Query: 2767 VRGVDALCITLHILMKSNIKSARYLLNQCXXXXXXXXXXXXVDHLLETSKR-CPSDNRLF 2591
            ++GV   C T+HI+M++N+K                         LE   R    D   +
Sbjct: 237  LKGVHGDCFTVHIMMRANLKDNN--------------EEEAKKFFLEAKSRGVKLDAAAY 282

Query: 2590 SYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMV 2411
            S V+ ++ +   +E A      +     VP       ++ A V+     +AL L  EM+ 
Sbjct: 283  SIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVS 342

Query: 2410 KGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRA 2231
             G+  +      ++    K+ K   A ++F +M   G   +  TY  +I   CK  +   
Sbjct: 343  CGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAK 402

Query: 2230 ACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMK 2051
            A +L  +MK+KN  P+ F  +++I   LK  +  EA +L DE V   + AN+    SL+ 
Sbjct: 403  AYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLS 461

Query: 2050 AYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPP 1871
              C +G +  A  L+ +M++ G++P KV+++ +I G  R GN+  A  ++  M   G+ P
Sbjct: 462  WLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKP 521

Query: 1870 TVFTLNSLIRGFLKDQFWEEAMRLFDESV-ECKVANVFTYNILLQWLCKEGRMTEACNLW 1694
             V T + L+ G+ K+   E A  +FD  V E  V + FTYNI +  LCK GR +EA ++ 
Sbjct: 522  NVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDML 581

Query: 1693 DKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKK 1514
             K + +G +P  ++YN ++ G+ + G++  A+ A+ EM E G+ PNVITY+TL++G+ K 
Sbjct: 582  KKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKN 641

Query: 1513 GDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTF 1334
             + + A  +RN+M N  +  +   +  +I+G  K      A+ +    +  G  P  + +
Sbjct: 642  NNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIY 701

Query: 1333 NSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRI 1154
            NS+I G+    +M+ AL + + M  +G+  ++ TYT+LIDG  K+ ++ LAL + +E+  
Sbjct: 702  NSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSA 761

Query: 1153 QGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEA 974
            +G+  D+  Y+ LI+G C  G +  A  I +E+    + PN  +YN+LI G     N++ 
Sbjct: 762  KGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQE 821

Query: 973  AMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASEL 857
            A  L+  M ++G+  +  TY  LI+  ++ GN    S L
Sbjct: 822  AFRLHNEMLDKGLTPNDTTYDILINGKIKGGNSALKSLL 860


>ref|XP_007013815.1| Pentatricopeptide repeat superfamily protein, putative [Theobroma
            cacao] gi|508784178|gb|EOY31434.1| Pentatricopeptide
            repeat superfamily protein, putative [Theobroma cacao]
          Length = 1159

 Score =  876 bits (2263), Expect = 0.0
 Identities = 443/781 (56%), Positives = 583/781 (74%), Gaps = 4/781 (0%)
 Frame = -3

Query: 2875 DSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKSNI--KSA 2702
            D+ LT+ HVI  LL ++++P SALKYF++ E +RGFVR +D  C+ LHIL+ S    K  
Sbjct: 378  DTSLTRTHVINTLLIHRNNPESALKYFRFVENKRGFVRSIDVFCVLLHILVGSQQTNKQV 437

Query: 2701 RYLLNQCXXXXXXXXXXXXVDHLLETSKRCPS--DNRLFSYVLNSYIQAGRIEDAAECFG 2528
            +YLLN+             +DHL++ +KR     D+R+F+Y+LNSY++  RI+DA +CF 
Sbjct: 438  KYLLNRFVAGDSGPTPIVFLDHLIDIAKRFDFELDSRVFNYLLNSYVRV-RIDDAVDCFN 496

Query: 2527 RLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEG 2348
             +I  DIVP +   NILLTALVR ++  KA +L+ +M+  G+  D  T+ +MM A LK+G
Sbjct: 497  GMIEHDIVPMLPFMNILLTALVRGNLIDKARELYDKMVSIGVRGDRVTVLLMMRAFLKDG 556

Query: 2347 KPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYS 2168
            KP +AE++F+E K RG ELDAA Y+  I A C+KPD   A  LL+EM+D+ W+PSE  ++
Sbjct: 557  KPWEAEEFFKEAKARGTELDAAVYSIAIQASCQKPDLNMAGGLLREMRDRGWVPSEGTFT 616

Query: 2167 NVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIES 1988
             VIGA +KQGN  EALRLKDE++      NLV+ATSLMK YC QGD+  AL L+ ++ E 
Sbjct: 617  TVIGAFVKQGNLAEALRLKDEMLSCGKQLNLVVATSLMKGYCKQGDIGSALYLFNKIKED 676

Query: 1987 GVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEA 1808
            G++PNKVT++VLIE C R  NV+KAYELY +M+ M I PTVF +NSLIRGFL+    +EA
Sbjct: 677  GLTPNKVTYAVLIEWCCRKQNVKKAYELYTEMKLMDIQPTVFNVNSLIRGFLEACSLKEA 736

Query: 1807 MRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGY 1628
              LFDE+VE  +ANVFTYN+LL   C +G++ EA +LW +M + GV+P+  SYN++IL +
Sbjct: 737  SNLFDEAVESGIANVFTYNVLLYHFCNDGKVNEAHSLWQRMEDNGVVPTYASYNNMILAH 796

Query: 1627 CRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPND 1448
            CR GNMD+A   F+EMLERGIKP VITY+ LMDG+FKKG+ EQA  V ++M+   I P+D
Sbjct: 797  CRAGNMDMAHTVFSEMLERGIKPTVITYTILMDGHFKKGNAEQALDVFDEMVGVNITPSD 856

Query: 1447 FTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQE 1268
            FTFN IINGL+K G+TSEA +MLK F+ +GF+P C+T+NSII+GF+KEG+M++ALA+Y+E
Sbjct: 857  FTFNIIINGLAKVGRTSEARDMLKKFVDKGFVPICLTYNSIINGFVKEGAMNSALAVYRE 916

Query: 1267 MPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGN 1088
            M   G+ PNVVTYT+LI+GFCK + IDLALKM+ E++ +GL LD+PA+SALIDGFCK  +
Sbjct: 917  MCESGLSPNVVTYTTLINGFCKSHNIDLALKMQYEMKSKGLRLDVPAFSALIDGFCKEQD 976

Query: 1087 MRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTT 908
            M  A ++FSEL  VGL PN  VYNS+I GFRN++NMEAA+ L+ +M NEGI CDL TYTT
Sbjct: 977  MDRACELFSELQQVGLSPNVIVYNSMIRGFRNVNNMEAALDLHKKMINEGILCDLQTYTT 1036

Query: 907  LIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKN 728
            LID  LR G LLFA +LY+EML KGIEPD  TYTVL+ GLCNKGQLE AR++L+EM+RK 
Sbjct: 1037 LIDGLLREGKLLFAFDLYSEMLAKGIEPDIITYTVLLNGLCNKGQLENARKILEEMDRKG 1096

Query: 727  TPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVGN 548
               +VLIYNTLIAG FK+GNL+EA RLH+EML+RGLVPD  T DIL+N K + +  L G 
Sbjct: 1097 MTPSVLIYNTLIAGQFKEGNLEEALRLHNEMLDRGLVPDAATYDILINGKAKGQTSLSGV 1156

Query: 547  S 545
            S
Sbjct: 1157 S 1157


>ref|XP_006450492.1| hypothetical protein CICLE_v10010816mg [Citrus clementina]
            gi|568859583|ref|XP_006483317.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Citrus sinensis]
            gi|557553718|gb|ESR63732.1| hypothetical protein
            CICLE_v10010816mg [Citrus clementina]
          Length = 850

 Score =  860 bits (2223), Expect = 0.0
 Identities = 439/778 (56%), Positives = 566/778 (72%), Gaps = 4/778 (0%)
 Frame = -3

Query: 2866 LTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS--NIKSARYL 2693
            L+Q  VI  LL+ +++P SA +YFK  E++RGF++ +D  C+ LHILMK   + + AR L
Sbjct: 72   LSQTSVISSLLSCRNEPVSAFEYFKRVERRRGFLKSLDTFCVLLHILMKDRESHRYARNL 131

Query: 2692 LNQCXXXXXXXXXXXXVDHLLETSKRCPSD--NRLFSYVLNSYIQAGRIEDAAECFGRLI 2519
            LN              +DHL+ET+KR   D  + +FSY+L SY++A RI DA +C   +I
Sbjct: 132  LNHYVSGGSEPTSAAIIDHLIETAKRFDFDLDSGVFSYLLRSYVRADRINDAVDCCNGMI 191

Query: 2518 RCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPE 2339
              DI+P +   N +L ALVR ++  +A + + +M +KGL  D  T+ VMM ACLKE   E
Sbjct: 192  ERDIIPLLRSMNSVLKALVRRNLIDEAKEFYNKMNLKGLGVDSVTIRVMMRACLKEDTTE 251

Query: 2338 KAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVI 2159
            +AE+YFR+ K  GV+LDA  Y  VI A+C+KP+ + AC L+KEM+D   +PS   Y+N+I
Sbjct: 252  EAEKYFRDAKALGVKLDARAYRMVIQALCRKPNLKVACGLVKEMRDMGRVPSR-VYTNLI 310

Query: 2158 GACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVS 1979
            GAC+K GN  EA RLKDE++      NLV+ATSLMK Y  QGDL  AL L  ++ E G+S
Sbjct: 311  GACVKHGNLTEAFRLKDEMMSCGKPMNLVVATSLMKGYYKQGDLSSALELLDKIKEDGLS 370

Query: 1978 PNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRL 1799
            PNKVTF+VLIEGC  NG V K YELY QM+ MGI P+VF +NSL+ GFLK Q  EEA +L
Sbjct: 371  PNKVTFAVLIEGCCTNGKVEKGYELYTQMKHMGIKPSVFIVNSLLCGFLKAQLLEEAYKL 430

Query: 1798 FDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRL 1619
            FDE+V+  +ANVFTYN LL WLCK G+++EACNLW KM++ GV PSVVSYN++IL +C +
Sbjct: 431  FDEAVDSGIANVFTYNDLLAWLCKRGKVSEACNLWQKMVSSGVRPSVVSYNNMILAHCTV 490

Query: 1618 GNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTF 1439
             NMD A   F+EMLE+ + PNV+TYS L+DGYFK+GD E+AF V +QM N +I+P D+T 
Sbjct: 491  KNMDEAYSVFSEMLEKRVTPNVVTYSVLIDGYFKQGDAERAFDVLDQMENAKISPTDYTS 550

Query: 1438 NTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPA 1259
            N IINGL K+G+TS A + LK  + +GFIP C+T+NSIIDGF+KE  M +AL +Y+EM  
Sbjct: 551  NIIINGLCKAGRTSVAWDKLKKMVEKGFIPKCLTYNSIIDGFVKEDDMISALTVYREMHE 610

Query: 1258 QGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRG 1079
             G+ PNVVTYT LI+GFC+KN+IDLALKMR E+  +GL+LD  AY +LI+GFC+  +M  
Sbjct: 611  SGLSPNVVTYTILINGFCRKNEIDLALKMRNEMMNEGLQLDATAYGSLINGFCRRRDMES 670

Query: 1078 AHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLID 899
            A  +F+ELL+VGL PNT VYNS+I GFRNL NMEAA+ ++ +M N+GIPCDL TYTTLI 
Sbjct: 671  ACKLFAELLEVGLSPNTVVYNSMINGFRNLGNMEAALDMHRKMINDGIPCDLQTYTTLIA 730

Query: 898  VSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPS 719
              L  G LL AS LY+EML+KGIEPD  TYTVLI GL  KGQLE AR++ DEMNRK    
Sbjct: 731  GLLEEGKLLTASNLYSEMLSKGIEPDIITYTVLINGLYGKGQLENARKIFDEMNRKCLTP 790

Query: 718  NVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVGNS 545
            NV I+NTLIAGYFK+GNLQEAFRLH+EML++GLVPD+TT DILVN K + E  + G S
Sbjct: 791  NVFIFNTLIAGYFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKGEKSVSGAS 848



 Score =  249 bits (635), Expect = 8e-63
 Identities = 170/643 (26%), Positives = 323/643 (50%), Gaps = 8/643 (1%)
 Frame = -3

Query: 2443 KALDLF---QEMMVKGLSCDCFTLDVMMHACLKEGKPEKA---EQYFREMKTRGVELDAA 2282
            K+LD F     +++K      +  +++ H      +P  A   +      K    +LD+ 
Sbjct: 106  KSLDTFCVLLHILMKDRESHRYARNLLNHYVSGGSEPTSAAIIDHLIETAKRFDFDLDSG 165

Query: 2281 TYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEI 2102
             ++ ++ +  +      A +    M +++ IP   + ++V+ A +++    EA    +++
Sbjct: 166  VFSYLLRSYVRADRINDAVDCCNGMIERDIIPLLRSMNSVLKALVRRNLIDEAKEFYNKM 225

Query: 2101 VGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNV 1922
                L  + V    +M+A   +   + A   +      GV  +   + ++I+   R  N+
Sbjct: 226  NLKGLGVDSVTIRVMMRACLKEDTTEEAEKYFRDAKALGVKLDARAYRMVIQALCRKPNL 285

Query: 1921 RKAYELYEQMRAMG-IPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVEC-KVANVFTYNI 1748
            + A  L ++MR MG +P  V+T  +LI   +K     EA RL DE + C K  N+     
Sbjct: 286  KVACGLVKEMRDMGRVPSRVYT--NLIGACVKHGNLTEAFRLKDEMMSCGKPMNLVVATS 343

Query: 1747 LLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERG 1568
            L++   K+G ++ A  L DK+  +G+ P+ V++  LI G C  G ++   + + +M   G
Sbjct: 344  LMKGYYKQGDLSSALELLDKIKEDGLSPNKVTFAVLIEGCCTNGKVEKGYELYTQMKHMG 403

Query: 1567 IKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEAN 1388
            IKP+V   ++L+ G+ K   +E+A+ + ++ ++  IA N FT+N ++  L K GK SEA 
Sbjct: 404  IKPSVFIVNSLLCGFLKAQLLEEAYKLFDEAVDSGIA-NVFTYNDLLAWLCKRGKVSEAC 462

Query: 1387 NMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGF 1208
            N+ +  +S G  P+ +++N++I       +MD A +++ EM  + V PNVVTY+ LIDG+
Sbjct: 463  NLWQKMVSSGVRPSVVSYNNMILAHCTVKNMDEAYSVFSEMLEKRVTPNVVTYSVLIDGY 522

Query: 1207 CKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNT 1028
             K+   + A  +  ++    +       + +I+G CK G    A D   ++++ G IP  
Sbjct: 523  FKQGDAERAFDVLDQMENAKISPTDYTSNIIINGLCKAGRTSVAWDKLKKMVEKGFIPKC 582

Query: 1027 AVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASELYTE 848
              YNS+I GF    +M +A+++Y  M   G+  ++ TYT LI+   R   +  A ++  E
Sbjct: 583  LTYNSIIDGFVKEDDMISALTVYREMHESGLSPNVVTYTILINGFCRKNEIDLALKMRNE 642

Query: 847  MLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKDGN 668
            M+ +G++ D T Y  LI G C +  +E+A ++  E+       N ++YN++I G+   GN
Sbjct: 643  MMNEGLQLDATAYGSLINGFCRRRDMESACKLFAELLEVGLSPNTVVYNSMINGFRNLGN 702

Query: 667  LQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVGNSAF 539
            ++ A  +H +M+  G+  D  T   L+    E+   L  ++ +
Sbjct: 703  MEAALDMHRKMINDGIPCDLQTYTTLIAGLLEEGKLLTASNLY 745


>ref|XP_004514126.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Cicer arietinum]
          Length = 850

 Score =  855 bits (2208), Expect = 0.0
 Identities = 424/775 (54%), Positives = 577/775 (74%), Gaps = 4/775 (0%)
 Frame = -3

Query: 2863 TQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS--NIKSARYLL 2690
            +Q+ +++ LL ++ +P+SALK+FK  E++RGFV+ VD   + L IL  +     S R LL
Sbjct: 75   SQNQILDTLLTHKSNPKSALKFFKGVERKRGFVKTVDVFSLLLQILSSTPQTHSSLRNLL 134

Query: 2689 NQCXXXXXXXXXXXXVDHLLETSKRC--PSDNRLFSYVLNSYIQAGRIEDAAECFGRLIR 2516
            N              V+HLLE S R    SD+R+F+Y+LNSY++A +I DA ECF  L+ 
Sbjct: 135  NNYVFGDSSPSPKVLVEHLLECSGRYGFESDSRVFNYLLNSYVRANKIVDAVECFRTLLE 194

Query: 2515 CDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEK 2336
             D++P +   NILLTA+VR +M   A  L+ EM+ +G+  DCFTL V+M ACLKEGK E+
Sbjct: 195  HDVIPWVPIMNILLTAMVRRNMICNARQLYDEMVERGMYGDCFTLHVVMRACLKEGKFEE 254

Query: 2335 AEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIG 2156
            AE++F+E K RG++LDAA+Y+ V+ AVCK+ D   AC+LLKEM++  W+PSE  Y++VI 
Sbjct: 255  AEKFFKEAKGRGLKLDAASYSIVVQAVCKRMDLNLACKLLKEMRELGWVPSEGTYTSVIV 314

Query: 2155 ACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSP 1976
            AC+K+GN VEALRL+DE+V + + AN+++ATSLMK +C+QGD++ AL L+ +++ SGV+P
Sbjct: 315  ACVKRGNFVEALRLRDEMVSSGVPANVIVATSLMKGHCMQGDVNVALQLFDEIVASGVAP 374

Query: 1975 NKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLF 1796
            +   FS+LI+GC + G++ KAY+LY QM+ MGI PTV  +N L++GF K    E A  L 
Sbjct: 375  DVGMFSLLIDGCSKIGDMEKAYDLYTQMKLMGIQPTVLIVNFLVKGFWKQNLLENAYGLL 434

Query: 1795 DESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLG 1616
            DE+VE  +ANV TYNI+L WLC+ G++ EACNLWDKMM+ G+ PS+VSYN+LILG+C+ G
Sbjct: 435  DEAVERGIANVVTYNIILMWLCELGKVKEACNLWDKMMSHGITPSLVSYNNLILGHCKKG 494

Query: 1615 NMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFN 1436
             MD A  A N++LERG+KPN +TY+ L+DG+FKKGD E+AF +  QML   IAP D TFN
Sbjct: 495  CMDDAYSALNDILERGLKPNAVTYTLLIDGFFKKGDSERAFVMFEQMLAASIAPTDHTFN 554

Query: 1435 TIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQ 1256
            T+INGL K+G+  EA + LK F+ +GFIPT +T+NSII+GF+KEG++D+AL  YQEM  +
Sbjct: 555  TVINGLGKTGRVFEAQDKLKDFIKQGFIPTSITYNSIINGFVKEGAIDSALFAYQEMRER 614

Query: 1255 GVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGA 1076
            G+FPNV+TYTSLI+GFCK N+IDLAL+M  +++ + +ELD+  YSALIDGFCK+ +M  A
Sbjct: 615  GIFPNVITYTSLINGFCKCNKIDLALEMHNDMKNKRMELDVTTYSALIDGFCKMQDMESA 674

Query: 1075 HDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDV 896
               FSELL +GL PN  VYNS+I+GFR+L+NMEAA++L+ +M    +PCDL TYT+LI  
Sbjct: 675  SKFFSELLAIGLAPNAVVYNSMISGFRHLNNMEAALNLHQKMIENKVPCDLKTYTSLIGG 734

Query: 895  SLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSN 716
             LR G L FA +LY+EM++KGI PD   YTVLI GLCN GQLE A ++L EMN  N   +
Sbjct: 735  LLRDGKLSFALDLYSEMISKGIVPDIFMYTVLINGLCNHGQLENAGKILKEMNGNNIIPS 794

Query: 715  VLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVG 551
            VL+YNTLIAG+FK+GNLQEA+RLHDEML++GLVPD+ T DILVN K +    L G
Sbjct: 795  VLVYNTLIAGHFKEGNLQEAYRLHDEMLDKGLVPDDITYDILVNGKLKVSHTLAG 849


>gb|EXB57399.1| hypothetical protein L484_016452 [Morus notabilis]
          Length = 907

 Score =  848 bits (2190), Expect = 0.0
 Identities = 427/767 (55%), Positives = 568/767 (74%), Gaps = 4/767 (0%)
 Frame = -3

Query: 2866 LTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKSNIK--SARYL 2693
            LTQ HVI  LL++++DP SALKYFKWAE+ RGF+RGVD+  + LHILM S     SA+ L
Sbjct: 84   LTQAHVINTLLSHKNDPYSALKYFKWAERMRGFIRGVDSFSVLLHILMGSQETHGSAQSL 143

Query: 2692 LNQCXXXXXXXXXXXXVDHLLETSKRCP--SDNRLFSYVLNSYIQAGRIEDAAECFGRLI 2519
            L+              VDHL + +KR     D+R+F+Y+LNSYI+A RI DA  CF +++
Sbjct: 144  LSLYVSGDSGPSANVFVDHLFDCAKRFEFEPDSRIFNYLLNSYIRANRIRDAVHCFNKMV 203

Query: 2518 RCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPE 2339
              DI+P +   NILLTAL+R +M+ +ALDL  +M+++G+  D  T+ V+M ACLK+ + E
Sbjct: 204  EHDILPWVPFMNILLTALIRRNMSREALDLHHKMVLRGVFGDRVTVPVLMRACLKKEREE 263

Query: 2338 KAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVI 2159
            +AE+YFRE   RG+ELDAA Y+ +I A CKKP+ + A ELLKEM+D +W+PSE  +++V+
Sbjct: 264  EAEKYFREATVRGIELDAAAYSFLIQAFCKKPNCKVASELLKEMRDMSWVPSEGTFTSVV 323

Query: 2158 GACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVS 1979
             AC+KQGN VEAL++KD++V      N+V+ TSLMK YCVQG L  ALNL  +M E GVS
Sbjct: 324  TACVKQGNMVEALKVKDQMVSCGKPLNVVVLTSLMKGYCVQGYLSSALNLLYKMNEYGVS 383

Query: 1978 PNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRL 1799
            PNK+T++VLIE   +NG++ KA+ELY +M+   I P  + +N L+ G LK Q +E+A +L
Sbjct: 384  PNKITYAVLIEWFSKNGDMEKAFELYNRMKITNIQPDAYVMNWLLHGLLKFQKFEDASKL 443

Query: 1798 FDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRL 1619
            F+E+VEC VAN F YN LL  LC EG++ EAC LWD M+++ V+P+VVSY+ +IL +CR 
Sbjct: 444  FNEAVECGVANTFLYNTLLNSLCNEGKVNEACALWDNMISKDVVPNVVSYSSMILCHCRK 503

Query: 1618 GNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTF 1439
            G +D+A   F EMLER +KP+V TYS L+DG FKKGDV++AF+V  QM+   IAP D+T+
Sbjct: 504  GALDMAHNLFTEMLERSVKPDVFTYSILIDGCFKKGDVKRAFNVYEQMMAVNIAPTDYTY 563

Query: 1438 NTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPA 1259
            NTIINGL + G+ SEA + LK ++ +GFIP C+T+NSII+GF K+G  ++AL +Y+EM  
Sbjct: 564  NTIINGLCRVGRASEARDELKKYVKKGFIPVCLTYNSIINGFTKKGDTNSALEVYREMCE 623

Query: 1258 QGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRG 1079
             GV PNVVTYTSLI+GF K   + LALKMR E++ +G++LD+ AY ALIDGFCK  ++  
Sbjct: 624  GGVSPNVVTYTSLIEGFLKSKNMALALKMRNEMKDKGIKLDVTAYGALIDGFCKGRDIVT 683

Query: 1078 AHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLID 899
            A+++FSELL+VG  PNT +Y S+I GFR L NMEAA+ L+ RM +EGIPCDL TYT L+D
Sbjct: 684  AYELFSELLEVGSSPNTTIYTSMICGFRTLGNMEAALRLHKRMLDEGIPCDLITYTALVD 743

Query: 898  VSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPS 719
              L+ G L  AS+LY EML+KGI PD  TYT LIKGLCNKGQL  AR+VL++M+ K    
Sbjct: 744  GLLKEGKLHIASDLYLEMLSKGIVPDIVTYTALIKGLCNKGQLGAARKVLEDMDGKGVAP 803

Query: 718  NVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSK 578
            NVLIYN LIAG+ K+GNLQEAFRLHDEML+RGLVPD+TT DIL+N K
Sbjct: 804  NVLIYNVLIAGHSKEGNLQEAFRLHDEMLDRGLVPDDTTYDILLNRK 850



 Score =  261 bits (667), Expect = 2e-66
 Identities = 164/589 (27%), Positives = 295/589 (50%), Gaps = 1/589 (0%)
 Frame = -3

Query: 2296 ELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALR 2117
            E D+  +N ++ +  +    R A     +M + + +P     + ++ A +++  + EAL 
Sbjct: 173  EPDSRIFNYLLNSYIRANRIRDAVHCFNKMVEHDILPWVPFMNILLTALIRRNMSREALD 232

Query: 2116 LKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCY 1937
            L  ++V   +  + V    LM+A   +   + A   + +    G+  +   +S LI+   
Sbjct: 233  LHHKMVLRGVFGDRVTVPVLMRACLKKEREEEAEKYFREATVRGIELDAAAYSFLIQAFC 292

Query: 1936 RNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVEC-KVANVF 1760
            +  N + A EL ++MR M   P+  T  S++   +K     EA+++ D+ V C K  NV 
Sbjct: 293  KKPNCKVASELLKEMRDMSWVPSEGTFTSVVTACVKQGNMVEALKVKDQMVSCGKPLNVV 352

Query: 1759 TYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEM 1580
                L++  C +G ++ A NL  KM   GV P+ ++Y  LI  + + G+M+ A + +N M
Sbjct: 353  VLTSLMKGYCVQGYLSSALNLLYKMNEYGVSPNKITYAVLIEWFSKNGDMEKAFELYNRM 412

Query: 1579 LERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKT 1400
                I+P+    + L+ G  K    E A  + N+ +   +A N F +NT++N L   GK 
Sbjct: 413  KITNIQPDAYVMNWLLHGLLKFQKFEDASKLFNEAVECGVA-NTFLYNTLLNSLCNEGKV 471

Query: 1399 SEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSL 1220
            +EA  +    +S+  +P  ++++S+I    ++G++D A  ++ EM  + V P+V TY+ L
Sbjct: 472  NEACALWDNMISKDVVPNVVSYSSMILCHCRKGALDMAHNLFTEMLERSVKPDVFTYSIL 531

Query: 1219 IDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGL 1040
            IDG  KK  +  A  +  ++    +      Y+ +I+G C++G    A D   + +  G 
Sbjct: 532  IDGCFKKGDVKRAFNVYEQMMAVNIAPTDYTYNTIINGLCRVGRASEARDELKKYVKKGF 591

Query: 1039 IPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASE 860
            IP    YNS+I GF    +  +A+ +Y  MC  G+  ++ TYT+LI+  L+  N+  A +
Sbjct: 592  IPVCLTYNSIINGFTKKGDTNSALEVYREMCEGGVSPNVVTYTSLIEGFLKSKNMALALK 651

Query: 859  LYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYF 680
            +  EM  KGI+ D T Y  LI G C    + TA E+  E+    +  N  IY ++I G+ 
Sbjct: 652  MRNEMKDKGIKLDVTAYGALIDGFCKGRDIVTAYELFSELLEVGSSPNTTIYTSMICGFR 711

Query: 679  KDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVGNSAFLK 533
              GN++ A RLH  ML+ G+  D  T   LV+   ++    + +  +L+
Sbjct: 712  TLGNMEAALRLHKRMLDEGIPCDLITYTALVDGLLKEGKLHIASDLYLE 760



 Score =  209 bits (532), Expect = 7e-51
 Identities = 120/441 (27%), Positives = 229/441 (51%), Gaps = 5/441 (1%)
 Frame = -3

Query: 2719 SNIKSARYLLNQCXXXXXXXXXXXXVDHLLETSKRCPSDNR-LFSYVLNSYIQAGRIEDA 2543
            +NI+   Y++N                 L   +  C   N  L++ +LNS    G++ +A
Sbjct: 415  TNIQPDAYVMNWLLHGLLKFQKFEDASKLFNEAVECGVANTFLYNTLLNSLCNEGKVNEA 474

Query: 2542 AECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHA 2363
               +  +I  D+VP ++  + ++    R      A +LF EM+ + +  D FT  +++  
Sbjct: 475  CALWDNMISKDVVPNVVSYSSMILCHCRKGALDMAHNLFTEMLERSVKPDVFTYSILIDG 534

Query: 2362 CLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPS 2183
            C K+G  ++A   + +M    +     TYNT+I  +C+   +  A + LK+   K +IP 
Sbjct: 535  CFKKGDVKRAFNVYEQMMAVNIAPTDYTYNTIINGLCRVGRASEARDELKKYVKKGFIPV 594

Query: 2182 EFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYA 2003
               Y+++I    K+G+T  AL +  E+    +  N+V  TSL++ +    ++  AL +  
Sbjct: 595  CLTYNSIINGFTKKGDTNSALEVYREMCEGGVSPNVVTYTSLIEGFLKSKNMALALKMRN 654

Query: 2002 QMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQ 1823
            +M + G+  +   +  LI+G  +  ++  AYEL+ ++  +G  P      S+I GF    
Sbjct: 655  EMKDKGIKLDVTAYGALIDGFCKGRDIVTAYELFSELLEVGSSPNTTIYTSMICGFRTLG 714

Query: 1822 FWEEAMRL----FDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVV 1655
              E A+RL     DE + C   ++ TY  L+  L KEG++  A +L+ +M+++G++P +V
Sbjct: 715  NMEAALRLHKRMLDEGIPC---DLITYTALVDGLLKEGKLHIASDLYLEMLSKGIVPDIV 771

Query: 1654 SYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQM 1475
            +Y  LI G C  G +  A K   +M  +G+ PNV+ Y+ L+ G+ K+G++++AF + ++M
Sbjct: 772  TYTALIKGLCNKGQLGAARKVLEDMDGKGVAPNVLIYNVLIAGHSKEGNLQEAFRLHDEM 831

Query: 1474 LNWRIAPNDFTFNTIINGLSK 1412
            L+  + P+D T++ ++N  +K
Sbjct: 832  LDRGLVPDDTTYDILLNRKAK 852


>ref|XP_006853118.1| hypothetical protein AMTR_s00038p00140720 [Amborella trichopoda]
            gi|548856757|gb|ERN14585.1| hypothetical protein
            AMTR_s00038p00140720 [Amborella trichopoda]
          Length = 855

 Score =  822 bits (2122), Expect = 0.0
 Identities = 420/813 (51%), Positives = 578/813 (71%), Gaps = 4/813 (0%)
 Frame = -3

Query: 2998 NGFLEQ-CRSGFSKDCCSEDSRHVQ-SRKILSQIEQEIASHRSDSVLTQDHVIEVLLNNQ 2825
            NG+L Q CR   S    S+  R +  S    SQI+++I+   S++VLTQ+HV+EVLL+NQ
Sbjct: 40   NGYLSQPCRCTQSPLPTSQFDREILLSLSNTSQIDRQISLSHSNTVLTQEHVVEVLLSNQ 99

Query: 2824 HDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS-NIKSARYLLNQCXXXXXXXXXXX 2648
             D ++AL+YF+WAE+QRGF+RG++ LC+ LHIL ++ ++ +AR L+              
Sbjct: 100  TDSKAALRYFRWAERQRGFIRGLEPLCVVLHILARNKDLPAARNLIKHSLSANSSIGASA 159

Query: 2647 XVDHLLETSKRCPSDNRLFSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTA 2468
             +D LLETS+RC S  R+F  VLN Y + G + ++ E + RL+   + P +   N+LL  
Sbjct: 160  FIDRLLETSERCNSHPRVFDLVLNGYTRYGSVTESLETYHRLVSNGVFPSVGCINLLLNK 219

Query: 2467 LVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELD 2288
            LVR +   +A DL++EM+ +G+  DC TLD M+HAC K GK E+AE  F+EM+ RG +LD
Sbjct: 220  LVRLNFIDEAWDLYREMVERGVDLDCQTLDAMVHACSKGGKLEEAEGLFQEMRIRGCKLD 279

Query: 2287 AATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKD 2108
            + +Y  +I A+CKK  S+ ACELL EMK    +PSE  Y+  IGAC K+GN  EALRLKD
Sbjct: 280  SVSYTNIIQALCKKTCSKKACELLTEMKKLGLVPSEITYTCAIGACSKEGNLEEALRLKD 339

Query: 2107 EIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNG 1928
            E++ +    N+V ATSL+K YC +G+LD A  L+     + + P  VTF+VLIEGCYRN 
Sbjct: 340  EMLSSGFSLNVVAATSLIKGYCNEGNLDEAFELF-----NIIEPTIVTFAVLIEGCYRNE 394

Query: 1927 NVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECKVANVFTYNI 1748
            ++ KA+ LY QM+  G+ P VFT+NS+I+GFLK   + EA+  F+E+VE KVANVFT++I
Sbjct: 395  DMVKAHNLYGQMQERGLSPNVFTVNSMIKGFLKKGMFNEALEYFEEAVESKVANVFTFDI 454

Query: 1747 LLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLER- 1571
            ++ WLCK+GR+ EA  LW+KM++ G+IP VVSYN L+ G CR GN+  A+   N+M ++ 
Sbjct: 455  IIFWLCKKGRVREASGLWEKMVSFGIIPDVVSYNTLLFGLCREGNIQGALNLLNQMTQQE 514

Query: 1570 GIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEA 1391
            GIKPN +TY+TL+DG FKKG +++A  + +QM+   I PND+T+N++INGL KSG+ SEA
Sbjct: 515  GIKPNDVTYTTLIDGCFKKGKMDRALKLYDQMVGLGILPNDYTWNSMINGLCKSGRPSEA 574

Query: 1390 NNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDG 1211
             NM++ F  EGF+P+C+T+NSIIDGFIKE  M +AL  Y  M   GV P+V TYTS I G
Sbjct: 575  CNMVREFAKEGFVPSCLTYNSIIDGFIKEDDMKSALEAYTHMCDNGVSPSVFTYTSFIAG 634

Query: 1210 FCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPN 1031
            FCK + I LALK+R  +R +GL+ DL  Y+ALIDGFCK G+M  A +IF+E+ +VGL PN
Sbjct: 635  FCKNDNIVLALKVRNVMRSRGLQSDLVTYNALIDGFCKRGDMYNAIEIFNEMCEVGLAPN 694

Query: 1030 TAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASELYT 851
             ++YN+L+ G+RN  NMEAA+ L+  M  EG+PCDLATYTTLID  L+ GN++ A ELY 
Sbjct: 695  ASIYNTLMGGYRNECNMEAALKLHKGMKEEGVPCDLATYTTLIDGLLKEGNVILALELYK 754

Query: 850  EMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKDG 671
            EML++ I PD  TYTVLI+GLC++G++E AR+ LDEM RK    NV+IYN LIAG + +G
Sbjct: 755  EMLSQYIMPDAITYTVLIRGLCSRGEMENARQFLDEMGRKGFSPNVIIYNALIAGCYGEG 814

Query: 670  NLQEAFRLHDEMLERGLVPDNTTLDILVNSKFE 572
            NL+EAF+L DEML++GL P+ TT DILV SKFE
Sbjct: 815  NLREAFQLLDEMLDKGLTPNETTYDILVASKFE 847



 Score =  274 bits (700), Expect = 2e-70
 Identities = 166/564 (29%), Positives = 284/564 (50%), Gaps = 32/564 (5%)
 Frame = -3

Query: 2164 VIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESG 1985
            V+    + G+  E+L     +V   +  ++     L+        +D A +LY +M+E G
Sbjct: 181  VLNGYTRYGSVTESLETYHRLVSNGVFPSVGCINLLLNKLVRLNFIDEAWDLYREMVERG 240

Query: 1984 VSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAM 1805
            V  +  T   ++  C + G + +A  L+++MR  G      +  ++I+   K    ++A 
Sbjct: 241  VDLDCQTLDAMVHACSKGGKLEEAEGLFQEMRIRGCKLDSVSYTNIIQALCKKTCSKKAC 300

Query: 1804 RLFDESVECK-VANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGY 1628
             L  E  +   V +  TY   +    KEG + EA  L D+M++ G   +VV+   LI GY
Sbjct: 301  ELLTEMKKLGLVPSEITYTCAIGACSKEGNLEEALRLKDEMLSSGFSLNVVAATSLIKGY 360

Query: 1627 CRLGNMDLAVKAFN------------------------------EMLERGIKPNVITYST 1538
            C  GN+D A + FN                              +M ERG+ PNV T ++
Sbjct: 361  CNEGNLDEAFELFNIIEPTIVTFAVLIEGCYRNEDMVKAHNLYGQMQERGLSPNVFTVNS 420

Query: 1537 LMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEG 1358
            ++ G+ KKG   +A     + +  ++A N FTF+ II  L K G+  EA+ + +  +S G
Sbjct: 421  MIKGFLKKGMFNEALEYFEEAVESKVA-NVFTFDIIIFWLCKKGRVREASGLWEKMVSFG 479

Query: 1357 FIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQ-GVFPNVVTYTSLIDGFCKKNQIDLA 1181
             IP  +++N+++ G  +EG++  AL +  +M  Q G+ PN VTYT+LIDG  KK ++D A
Sbjct: 480  IIPDVVSYNTLLFGLCREGNIQGALNLLNQMTQQEGIKPNDVTYTTLIDGCFKKGKMDRA 539

Query: 1180 LKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITG 1001
            LK+  ++   G+  +   ++++I+G CK G    A ++  E    G +P+   YNS+I G
Sbjct: 540  LKLYDQMVGLGILPNDYTWNSMINGLCKSGRPSEACNMVREFAKEGFVPSCLTYNSIIDG 599

Query: 1000 FRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPD 821
            F    +M++A+  Y  MC+ G+   + TYT+ I    +  N++ A ++   M ++G++ D
Sbjct: 600  FIKEDDMKSALEAYTHMCDNGVSPSVFTYTSFIAGFCKNDNIVLALKVRNVMRSRGLQSD 659

Query: 820  FTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHD 641
              TY  LI G C +G +  A E+ +EM       N  IYNTL+ GY  + N++ A +LH 
Sbjct: 660  LVTYNALIDGFCKRGDMYNAIEIFNEMCEVGLAPNASIYNTLMGGYRNECNMEAALKLHK 719

Query: 640  EMLERGLVPDNTTLDILVNSKFEQ 569
             M E G+  D  T   L++   ++
Sbjct: 720  GMKEEGVPCDLATYTTLIDGLLKE 743



 Score =  179 bits (454), Expect = 8e-42
 Identities = 114/416 (27%), Positives = 212/416 (50%), Gaps = 1/416 (0%)
 Frame = -3

Query: 1804 RLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYC 1625
            RL + S  C  ++   ++++L    + G +TE+   + ++++ GV PSV   N L+    
Sbjct: 163  RLLETSERCN-SHPRVFDLVLNGYTRYGSVTESLETYHRLVSNGVFPSVGCINLLLNKLV 221

Query: 1624 RLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDF 1445
            RL  +D A   + EM+ERG+  +  T   ++    K G +E+A  +  +M       +  
Sbjct: 222  RLNFIDEAWDLYREMVERGVDLDCQTLDAMVHACSKGGKLEEAEGLFQEMRIRGCKLDSV 281

Query: 1444 TFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEM 1265
            ++  II  L K   + +A  +L      G +P+ +T+   I    KEG+++ AL +  EM
Sbjct: 282  SYTNIIQALCKKTCSKKACELLTEMKKLGLVPSEITYTCAIGACSKEGNLEEALRLKDEM 341

Query: 1264 PAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNM 1085
             + G   NVV  TSLI G+C +  +D A ++        +E  +  ++ LI+G  +  +M
Sbjct: 342  LSSGFSLNVVAATSLIKGYCNEGNLDEAFEL-----FNIIEPTIVTFAVLIEGCYRNEDM 396

Query: 1084 RGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTL 905
              AH+++ ++ + GL PN    NS+I GF        A+  +       +  ++ T+  +
Sbjct: 397  VKAHNLYGQMQERGLSPNVFTVNSMIKGFLKKGMFNEALEYFEEAVESKV-ANVFTFDII 455

Query: 904  IDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKN- 728
            I    + G +  AS L+ +M++ GI PD  +Y  L+ GLC +G ++ A  +L++M ++  
Sbjct: 456  IFWLCKKGRVREASGLWEKMVSFGIIPDVVSYNTLLFGLCREGNIQGALNLLNQMTQQEG 515

Query: 727  TPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAP 560
               N + Y TLI G FK G +  A +L+D+M+  G++P++ T + ++N   +   P
Sbjct: 516  IKPNDVTYTTLIDGCFKKGKMDRALKLYDQMVGLGILPNDYTWNSMINGLCKSGRP 571


>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355508380|gb|AES89522.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  802 bits (2072), Expect = 0.0
 Identities = 403/789 (51%), Positives = 560/789 (70%), Gaps = 4/789 (0%)
 Frame = -3

Query: 2902 EQEIASHRSDSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILM 2723
            E+ I S  S     ++  +  LL+++ +P+SALK+F   E++RGFV+ VD + + +HIL 
Sbjct: 46   EKIIISPESQPSEKKNRFLVTLLSHKSNPKSALKFFHQVERKRGFVKTVDFISLLIHILS 105

Query: 2722 KSN--IKSARYLLNQCXXXXXXXXXXXXVDHLLETSKRC--PSDNRLFSYVLNSYIQAGR 2555
             ++    S ++LLN              V+ LLE S R    SD+R+F+Y+L S+++  +
Sbjct: 106  SNSKTCSSLQFLLNNYVFGDATPSAKVFVECLLECSGRYGFESDSRVFNYLLKSFVRVNK 165

Query: 2554 IEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDV 2375
            I DA ECF  ++  D+VP +   N LLTA+VR +M   A  L+ EM+ +G+  DC+TL V
Sbjct: 166  ITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHV 225

Query: 2374 MMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKN 2195
            +M AC+KEGK E+ E++F+E K RG+E+DAA Y+ ++ AVC++ D   ACELLKEM++  
Sbjct: 226  VMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFG 285

Query: 2194 WIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGAL 2015
            W+PS+  Y+ VI AC+KQGN VEALRLKDE+V   L  N+++  SLMK YCV GD++ AL
Sbjct: 286  WVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLAL 345

Query: 2014 NLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGF 1835
             L+ +++E GV P+ V FSVLI GC + G++ KAYELY +M+ MGI P VF +NSL+ GF
Sbjct: 346  QLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGF 405

Query: 1834 LKDQFWEEAMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVV 1655
             +    E A  LFDE+VE  + NV TYNILL+WL + G++ EACNLW+KM+++G+ PS+V
Sbjct: 406  HEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLV 465

Query: 1654 SYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQM 1475
            SYN+LILG+C+ G MD A      +LERG+KPN +TY+ L+DG+FKKGD E+AF V  QM
Sbjct: 466  SYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQM 525

Query: 1474 LNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSM 1295
            +   IAP D TFNT+INGL K+G+ SE  + L  F+ +GF+ T +T+NSIIDGF KEG++
Sbjct: 526  MAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAV 585

Query: 1294 DTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSAL 1115
            D+AL  Y+EM   G+ P+V+TYTSLIDG CK N+I LAL+M ++++ +G++LD+ AYSAL
Sbjct: 586  DSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSAL 645

Query: 1114 IDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGI 935
            IDGFCK+ +M  A   F+ELLD+GL PNT VYNS+I+GF +L+NMEAA++L+  M    +
Sbjct: 646  IDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKV 705

Query: 934  PCDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETARE 755
            PCDL  YT++I   L+ G L  A +LY+EML+K I PD   YTVLI GL N GQLE A +
Sbjct: 706  PCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASK 765

Query: 754  VLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKF 575
            +L EM+  N   +VL+YN LIAG F++GNLQEAFRLHDEML++GLVPD+TT DILVN K 
Sbjct: 766  ILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKL 825

Query: 574  EQEAPLVGN 548
            +    L G+
Sbjct: 826  KVSHTLGGS 834


>gb|EYU21955.1| hypothetical protein MIMGU_mgv1a001349mg [Mimulus guttatus]
          Length = 836

 Score =  776 bits (2005), Expect = 0.0
 Identities = 395/774 (51%), Positives = 544/774 (70%), Gaps = 8/774 (1%)
 Frame = -3

Query: 2866 LTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGV-DALCITLHILMKSNIK--SARY 2696
            L+Q +V+E LL+N +DPRSAL YF+WAEKQRGFVR + D+  + LHIL+ S+    SAR 
Sbjct: 69   LSQANVVETLLSNFNDPRSALDYFRWAEKQRGFVREIGDSFLVLLHILVSSHYHHGSARN 128

Query: 2695 LLNQCXXXXXXXXXXXXVDHLLETS-----KRCPSDNRLFSYVLNSYIQAGRIEDAAECF 2531
            LLN              V  L++ S     +R P   R+F Y LN Y++A R +DA +CF
Sbjct: 129  LLNNYLSSDSAPSGGVLVQRLIDCSDKFGFRRSP---RIFDYALNGYVRAQRYKDAEDCF 185

Query: 2530 GRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKE 2351
              L+   ++P +   N  L +L+R  M  +A  LF  ++ K LS DC T+++MM A L+E
Sbjct: 186  YALVSRGVIPCVRILNNFLHSLIRTSMIDEARGLFGGIVSKKLSYDCATVNMMMCASLRE 245

Query: 2350 GKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAY 2171
            GK E+AE++F E K  G+ LD   YNT +   C KPD   A  LL EMK+K W+P++  Y
Sbjct: 246  GKTEEAEKFFLEAKRSGIILDPFVYNTAVRTACMKPDLNVAFVLLSEMKEKGWVPAKGTY 305

Query: 2170 SNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIE 1991
            +++I  C++Q N  EALRL DE++      NLV+ATSLMK Y  QG+L+ AL L+ +++E
Sbjct: 306  THLICTCVEQRNMTEALRLNDEMISKGHPMNLVVATSLMKGYYQQGNLNSALELFDKVLE 365

Query: 1990 SGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEE 1811
            +G+SPNKVT++VLIEGC  + N+ K  ELYE+M++ GI PTV+ +NSLIRG L++Q  +E
Sbjct: 366  NGLSPNKVTYAVLIEGCRVHRNMVKGRELYEKMKSAGILPTVYIVNSLIRGCLQNQLIDE 425

Query: 1810 AMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILG 1631
            A ++FDE+V   +ANVFTYN L+ W C+ GR+ +A  +WDKM++ G+ PSVVSYN++ILG
Sbjct: 426  ANKIFDEAVSDGIANVFTYNNLISWFCEGGRLGDAIRVWDKMIDHGIEPSVVSYNNMILG 485

Query: 1630 YCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPN 1451
             CR G MD+A    +EM E+ +KPNVITYS L+DGYFKKG+ E+A ++ + ML   I+P 
Sbjct: 486  NCRKGFMDVAAALLSEMAEKNVKPNVITYSILVDGYFKKGETEKAIALFDSMLTSGISPT 545

Query: 1450 DFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQ 1271
            D T+NT+INGL + G+T  A + ++ F+++GF P CMT+NS+I+GF+KEG +++ALA+Y 
Sbjct: 546  DVTYNTVINGLCRVGQTVAAKDRMEEFVAKGFAPICMTYNSLINGFMKEGEVNSALAVYN 605

Query: 1270 EMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIG 1091
            EM   G+ PN             +  +DLALKM+ E+R +G+E+D+  Y+ALID FCK  
Sbjct: 606  EMCGTGILPN-------------RKNLDLALKMQREMRAKGIEMDVTCYNALIDAFCKRN 652

Query: 1090 NMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYT 911
            +M  A ++F E+LDVGL P T VYN++I G+R+L NME+A+ LY RM NEGI CDL TYT
Sbjct: 653  DMNSARELFDEILDVGLSPTTGVYNTMIGGYRDLYNMESALDLYKRMKNEGIQCDLETYT 712

Query: 910  TLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRK 731
            TLID  L+VGN++ ASE Y EML K I PD  TY+VL++GLCNKGQ+  AR+VL+EM +K
Sbjct: 713  TLIDGLLKVGNIVLASETYQEMLAKNIVPDVITYSVLVRGLCNKGQVANARKVLEEMVKK 772

Query: 730  NTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQ 569
            +   NVL+YNTLIAGYF++GNLQEAFRLHDEML+RGL PD+ T DILVN  F+Q
Sbjct: 773  SITPNVLVYNTLIAGYFREGNLQEAFRLHDEMLDRGLAPDDATYDILVNGNFKQ 826



 Score =  196 bits (498), Expect = 7e-47
 Identities = 111/403 (27%), Positives = 213/403 (52%), Gaps = 4/403 (0%)
 Frame = -3

Query: 2593 FSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMM 2414
            ++ +++ + + GR+ DA   + ++I   I P ++  N ++    R      A  L  EM 
Sbjct: 444  YNNLISWFCEGGRLGDAIRVWDKMIDHGIEPSVVSYNNMILGNCRKGFMDVAAALLSEMA 503

Query: 2413 VKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSR 2234
             K +  +  T  +++    K+G+ EKA   F  M T G+     TYNTVI  +C+   + 
Sbjct: 504  EKNVKPNVITYSILVDGYFKKGETEKAIALFDSMLTSGISPTDVTYNTVINGLCRVGQTV 563

Query: 2233 AACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLM 2054
            AA + ++E   K + P    Y+++I   +K+G    AL + +E+ GT +L N        
Sbjct: 564  AAKDRMEEFVAKGFAPICMTYNSLINGFMKEGEVNSALAVYNEMCGTGILPN-------- 615

Query: 2053 KAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIP 1874
                 + +LD AL +  +M   G+  +   ++ LI+   +  ++  A EL++++  +G+ 
Sbjct: 616  -----RKNLDLALKMQREMRAKGIEMDVTCYNALIDAFCKRNDMNSARELFDEILDVGLS 670

Query: 1873 PTVFTLNSLIRGFLKDQFWEEAMRLF----DESVECKVANVFTYNILLQWLCKEGRMTEA 1706
            PT    N++I G+      E A+ L+    +E ++C +    TY  L+  L K G +  A
Sbjct: 671  PTTGVYNTMIGGYRDLYNMESALDLYKRMKNEGIQCDLE---TYTTLIDGLLKVGNIVLA 727

Query: 1705 CNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDG 1526
               + +M+ + ++P V++Y+ L+ G C  G +  A K   EM+++ I PNV+ Y+TL+ G
Sbjct: 728  SETYQEMLAKNIVPDVITYSVLVRGLCNKGQVANARKVLEEMVKKSITPNVLVYNTLIAG 787

Query: 1525 YFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTS 1397
            YF++G++++AF + ++ML+  +AP+D T++ ++NG  K   +S
Sbjct: 788  YFREGNLQEAFRLHDEMLDRGLAPDDATYDILVNGNFKQTVSS 830



 Score =  186 bits (472), Expect = 7e-44
 Identities = 120/468 (25%), Positives = 225/468 (48%), Gaps = 1/468 (0%)
 Frame = -3

Query: 1963 FSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESV 1784
            F   + G  R    + A + +  + + G+ P V  LN+ +   ++    +EA  LF   V
Sbjct: 165  FDYALNGYVRAQRYKDAEDCFYALVSRGVIPCVRILNNFLHSLIRTSMIDEARGLFGGIV 224

Query: 1783 ECKVA-NVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMD 1607
              K++ +  T N+++    +EG+  EA   + +    G+I     YN  +   C   +++
Sbjct: 225  SKKLSYDCATVNMMMCASLREGKTEEAEKFFLEAKRSGIILDPFVYNTAVRTACMKPDLN 284

Query: 1606 LAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTII 1427
            +A    +EM E+G  P   TY+ L+    ++ ++ +A  + ++M++     N     +++
Sbjct: 285  VAFVLLSEMKEKGWVPAKGTYTHLICTCVEQRNMTEALRLNDEMISKGHPMNLVVATSLM 344

Query: 1426 NGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVF 1247
             G  + G  + A  +    +  G  P  +T+  +I+G     +M     +Y++M + G+ 
Sbjct: 345  KGYYQQGNLNSALELFDKVLENGLSPNKVTYAVLIEGCRVHRNMVKGRELYEKMKSAGIL 404

Query: 1246 PNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDI 1067
            P V    SLI G  +   ID A K+  E    G+  ++  Y+ LI  FC+ G +  A  +
Sbjct: 405  PTVYIVNSLIRGCLQNQLIDEANKIFDEAVSDGIA-NVFTYNNLISWFCEGGRLGDAIRV 463

Query: 1066 FSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLR 887
            + +++D G+ P+   YN++I G      M+ A +L   M  + +  ++ TY+ L+D   +
Sbjct: 464  WDKMIDHGIEPSVVSYNNMILGNCRKGFMDVAAALLSEMAEKNVKPNVITYSILVDGYFK 523

Query: 886  VGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLI 707
             G    A  L+  MLT GI P   TY  +I GLC  GQ   A++ ++E   K      + 
Sbjct: 524  KGETEKAIALFDSMLTSGISPTDVTYNTVINGLCRVGQTVAAKDRMEEFVAKGFAPICMT 583

Query: 706  YNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEA 563
            YN+LI G+ K+G +  A  +++EM   G++P+   LD+ +  + E  A
Sbjct: 584  YNSLINGFMKEGEVNSALAVYNEMCGTGILPNRKNLDLALKMQREMRA 631



 Score = 75.5 bits (184), Expect = 2e-10
 Identities = 61/274 (22%), Positives = 114/274 (41%)
 Frame = -3

Query: 1360 GFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLA 1181
            GF  +   F+  ++G+++      A   +  + ++GV P V    + +    + + ID A
Sbjct: 157  GFRRSPRIFDYALNGYVRAQRYKDAEDCFYALVSRGVIPCVRILNNFLHSLIRTSMIDEA 216

Query: 1180 LKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITG 1001
              +   +  + L  D    + ++    + G    A   F E    G+I +  VYN+ +  
Sbjct: 217  RGLFGGIVSKKLSYDCATVNMMMCASLREGKTEEAEKFFLEAKRSGIILDPFVYNTAVRT 276

Query: 1000 FRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPD 821
                 ++  A  L   M  +G      TYT LI   +   N+  A  L  EM++KG   +
Sbjct: 277  ACMKPDLNVAFVLLSEMKEKGWVPAKGTYTHLICTCVEQRNMTEALRLNDEMISKGHPMN 336

Query: 820  FTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHD 641
                T L+KG   +G L +A E+ D++       N + Y  LI G     N+ +   L++
Sbjct: 337  LVVATSLMKGYYQQGNLNSALELFDKVLENGLSPNKVTYAVLIEGCRVHRNMVKGRELYE 396

Query: 640  EMLERGLVPDNTTLDILVNSKFEQEAPLVGNSAF 539
            +M   G++P    ++ L+    + +     N  F
Sbjct: 397  KMKSAGILPTVYIVNSLIRGCLQNQLIDEANKIF 430


>ref|XP_006364273.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like isoform X1 [Solanum tuberosum]
            gi|565397380|ref|XP_006364274.1| PREDICTED:
            pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like isoform X2 [Solanum tuberosum]
          Length = 854

 Score =  763 bits (1970), Expect = 0.0
 Identities = 385/783 (49%), Positives = 553/783 (70%), Gaps = 6/783 (0%)
 Frame = -3

Query: 2875 DSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGV-DALCITLHILMKSNIKS-- 2705
            D   T+ HV++VLL+++ DP SA ++F+ A  QRGF+    D   + LHIL+ S +    
Sbjct: 69   DGKFTKTHVVDVLLSHRDDPDSAYRHFQTARLQRGFLHSKSDPFFVLLHILVNSAMHQHK 128

Query: 2704 ARYLLNQCXXXXXXXXXXXXVDHLLETSKRCPSD--NRLFSYVLNSYIQAGRIEDAAECF 2531
            AR LL+               + L++  K    +   ++F+++++S ++A R+ DA +CF
Sbjct: 129  ARRLLDYYASSDSGPSATIIFNGLVKCGKTFDFELNPKIFNFLISSCVKANRLNDAIDCF 188

Query: 2530 GRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKE 2351
              ++  DI+  I   N LL  LVR DM G A DL+ +++ +G   DC T+ ++M ACL+E
Sbjct: 189  NGMLEHDIMLWIPIMNRLLKELVRQDMVGVAGDLYTDIVSRGTHYDCRTVHILMAACLRE 248

Query: 2350 GKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAY 2171
            G+ ++A +   E K  G++ DA  Y+  +Y  CK+ +   A +LL+EMK   W+PSE  Y
Sbjct: 249  GRIKEAVKLLEEAKMSGIKFDAGLYSCWVYVACKEQNLSLALKLLEEMKCGGWVPSERTY 308

Query: 2170 SNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIE 1991
            +N+I AC+KQGN VEALRLKDE++    L NLV+ATSLMK Y +QG+L  AL+L+ +++E
Sbjct: 309  TNIISACVKQGNMVEALRLKDEMLSNGHLMNLVVATSLMKGYHLQGNLSSALDLFDKLVE 368

Query: 1990 SGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEE 1811
             G++PNKVT++VLIEGC +NGNV KA  +Y QM+  GI    +  NSLI+GFL     +E
Sbjct: 369  YGLTPNKVTYAVLIEGCCKNGNVEKAALVYRQMKLAGIKSNAYVENSLIKGFLSVNLLDE 428

Query: 1810 AMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILG 1631
            AM +FD ++    ANVF YN ++ W CK+G+M +A N WDKM+  G++P++ SYN++ILG
Sbjct: 429  AMNVFDGAINSGTANVFVYNSIIAWSCKKGQMDKAQNTWDKMVANGILPTITSYNNIILG 488

Query: 1630 YCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPN 1451
             CR GNMD A+  F+++ ER +K NV+TYS L+DGYF+KGD ++A ++ +QM++  I+P 
Sbjct: 489  NCRNGNMDKALDLFSQLPERHLKANVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPT 548

Query: 1450 DFTFNTIINGLSKSGKTSEANNMLKGFMSEG-FIPTCMTFNSIIDGFIKEGSMDTALAIY 1274
            D+TFNT+I+G+SK GKTSEA ++LK  +  G  IPTCM++NS+IDGF+KEG + +ALA+Y
Sbjct: 549  DYTFNTVISGMSKVGKTSEAKDLLKKIVEGGDLIPTCMSYNSLIDGFLKEGDVSSALAVY 608

Query: 1273 QEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKI 1094
            +EM   G+ P+VVTYT+LIDG CK N I+LALK+  E+R + ++LD+ AY+ LIDGFCK 
Sbjct: 609  REMCNSGISPDVVTYTTLIDGLCKSNNINLALKLLKEMRNKEIKLDVIAYAVLIDGFCKR 668

Query: 1093 GNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATY 914
             +M+ A ++F E+L VG+ PN  VYNS+++GFRN++NMEAA+ L  +M NEG+PCDL TY
Sbjct: 669  RDMKSASELFDEILQVGISPNLFVYNSMMSGFRNVNNMEAALVLRDKMINEGVPCDLETY 728

Query: 913  TTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNR 734
            TTLID  L+ G +  AS+L+TEML KGI PD  TYTVL+ GL NKGQ+E A +VL+EM +
Sbjct: 729  TTLIDGLLKDGKIDLASDLFTEMLGKGIMPDDITYTVLVHGLSNKGQVENAHKVLEEMCK 788

Query: 733  KNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLV 554
            K+   +VLIYNTLIAGYFK+GNLQEAFRLHDEML++GL PD+ T DIL++ K +  +   
Sbjct: 789  KSMTPSVLIYNTLIAGYFKEGNLQEAFRLHDEMLDKGLKPDDATYDILISGKLKDNSLGR 848

Query: 553  GNS 545
            G+S
Sbjct: 849  GSS 851



 Score =  200 bits (509), Expect = 3e-48
 Identities = 114/408 (27%), Positives = 229/408 (56%), Gaps = 6/408 (1%)
 Frame = -3

Query: 2587 YVLNSYI----QAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQE 2420
            +V NS I    + G+++ A   + +++   I+P I   N ++    R     KALDLF +
Sbjct: 445  FVYNSIIAWSCKKGQMDKAQNTWDKMVANGILPTITSYNNIILGNCRNGNMDKALDLFSQ 504

Query: 2419 MMVKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPD 2240
            +  + L  +  T  +++    ++G  +KAE  F +M + G+     T+NTVI  + K   
Sbjct: 505  LPERHLKANVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPTDYTFNTVISGMSKVGK 564

Query: 2239 SRAACELLKEMKDK-NWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLAT 2063
            +  A +LLK++ +  + IP+  +Y+++I   LK+G+   AL +  E+  + +  ++V  T
Sbjct: 565  TSEAKDLLKKIVEGGDLIPTCMSYNSLIDGFLKEGDVSSALAVYREMCNSGISPDVVTYT 624

Query: 2062 SLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAM 1883
            +L+   C   +++ AL L  +M    +  + + ++VLI+G  +  +++ A EL++++  +
Sbjct: 625  TLIDGLCKSNNINLALKLLKEMRNKEIKLDVIAYAVLIDGFCKRRDMKSASELFDEILQV 684

Query: 1882 GIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECKV-ANVFTYNILLQWLCKEGRMTEA 1706
            GI P +F  NS++ GF      E A+ L D+ +   V  ++ TY  L+  L K+G++  A
Sbjct: 685  GISPNLFVYNSMMSGFRNVNNMEAALVLRDKMINEGVPCDLETYTTLIDGLLKDGKIDLA 744

Query: 1705 CNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDG 1526
             +L+ +M+ +G++P  ++Y  L+ G    G ++ A K   EM ++ + P+V+ Y+TL+ G
Sbjct: 745  SDLFTEMLGKGIMPDDITYTVLVHGLSNKGQVENAHKVLEEMCKKSMTPSVLIYNTLIAG 804

Query: 1525 YFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNM 1382
            YFK+G++++AF + ++ML+  + P+D T++ +I+G  K       ++M
Sbjct: 805  YFKEGNLQEAFRLHDEMLDKGLKPDDATYDILISGKLKDNSLGRGSSM 852


>ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  753 bits (1945), Expect = 0.0
 Identities = 358/646 (55%), Positives = 490/646 (75%)
 Frame = -3

Query: 2509 IVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKAE 2330
            + P I   NILLTA+VR +MT +A +L  +M++ G++ DCFTL VM+ ACLKEG   +AE
Sbjct: 1    MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 2329 QYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGAC 2150
            Q+F + K RGVELD   Y+  ++ +C KP+S  A  LL+EM+   WIP E  +++VI AC
Sbjct: 61   QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 2149 LKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNK 1970
            +K+GN  EALRLKD++V      NL +ATSLMK YC+QG+L  AL L  ++ ESG+ PNK
Sbjct: 121  VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 1969 VTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDE 1790
            VT+SVLI+GC +NGN+ KA+E Y +M+  GI  +V++LNS++ G+LK Q W+ A  +F++
Sbjct: 181  VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 1789 SVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNM 1610
            ++E  +ANVFT+N LL WLCKEG+M EACNLWD+++ +G+ P+VVSYN++ILG+CR  N+
Sbjct: 241  ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 1609 DLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTI 1430
            + A K + EML+ G  PN +T++ LMDGYFKKGD+E AFS+ ++M +  I P D T   I
Sbjct: 301  NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 1429 INGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGV 1250
            I GL K+G++ E  ++   F+S+GF+PTCM +N+IIDGFIKEG+++ A  +Y+EM   G+
Sbjct: 361  IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 1249 FPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHD 1070
             P+ VTYTSLIDGFCK N IDLALK+  +++ +GL++D+ AY  LIDGFCK  +M+ AH+
Sbjct: 421  TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 480

Query: 1069 IFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSL 890
            + +EL   GL PN  +YNS+ITGF+N++N+E A+ LY +M NEGIPCDL TYT+LID  L
Sbjct: 481  LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540

Query: 889  RVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVL 710
            + G LL+AS+++TEML+KGI PD   +TVLI GLCNKGQ E AR++L++MN KN   +VL
Sbjct: 541  KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVL 600

Query: 709  IYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFE 572
            IYNTLIAG+FK+GNLQEAFRLHDEML+RGLVPDN T DILVN KF+
Sbjct: 601  IYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646



 Score =  246 bits (627), Expect = 7e-62
 Identities = 141/528 (26%), Positives = 260/528 (49%)
 Frame = -3

Query: 2584 VLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKG 2405
            ++  Y   G +  A      +    +VP  +  ++L+    +     KA + + EM  KG
Sbjct: 151  LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210

Query: 2404 LSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAAC 2225
            +    ++L+ ++   LK    + A   F +    G+  +  T+NT++  +CK+     AC
Sbjct: 211  IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEAC 269

Query: 2224 ELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAY 2045
             L  E+  K   P+  +Y+N+I    ++ N   A ++  E++      N V  T LM  Y
Sbjct: 270  NLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGY 329

Query: 2044 CVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTV 1865
              +GD++ A +++ +M ++ + P   T  ++I+G  + G   +  +L+ +  + G  PT 
Sbjct: 330  FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTC 389

Query: 1864 FTLNSLIRGFLKDQFWEEAMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKM 1685
               N++I GF+                                  KEG +  A N++ +M
Sbjct: 390  MPYNTIIDGFI----------------------------------KEGNINLASNVYREM 415

Query: 1684 MNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDV 1505
               G+ PS V+Y  LI G+C+  N+DLA+K  N+M  +G+K ++  Y TL+DG+ K+ D+
Sbjct: 416  CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDM 475

Query: 1504 EQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSI 1325
            + A  + N++    ++PN F +N++I G        EA ++ K  ++EG      T+ S+
Sbjct: 476  KSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSL 535

Query: 1324 IDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGL 1145
            IDG +K G +  A  I+ EM ++G+ P+   +T LI+G C K Q + A K+  ++  + +
Sbjct: 536  IDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNM 595

Query: 1144 ELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITG 1001
               +  Y+ LI G  K GN++ A  +  E+LD GL+P+   Y+ L+ G
Sbjct: 596  IPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  185 bits (469), Expect = 1e-43
 Identities = 106/395 (26%), Positives = 204/395 (51%), Gaps = 1/395 (0%)
 Frame = -3

Query: 2593 FSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMM 2414
            F+ +L+   + G++ +A   +  +I   I P ++  N ++    R D    A  +++EM+
Sbjct: 252  FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 311

Query: 2413 VKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSR 2234
              G + +  T  ++M    K+G  E A   F  MK   +     T   +I  +CK   S 
Sbjct: 312  DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 371

Query: 2233 AACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLM 2054
               +L  +   + ++P+   Y+ +I   +K+GN   A  +  E+    +  + V  TSL+
Sbjct: 372  EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLI 431

Query: 2053 KAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIP 1874
              +C   ++D AL L   M   G+  +   +  LI+G  +  +++ A+EL  ++R  G+ 
Sbjct: 432  DGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 491

Query: 1873 PTVFTLNSLIRGFLKDQFWEEAMRLFDESV-ECKVANVFTYNILLQWLCKEGRMTEACNL 1697
            P  F  NS+I GF      EEA+ L+ + V E    ++ TY  L+  L K GR+  A ++
Sbjct: 492  PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDI 551

Query: 1696 WDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFK 1517
              +M+++G++P   ++  LI G C  G  + A K   +M  + + P+V+ Y+TL+ G+FK
Sbjct: 552  HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 611

Query: 1516 KGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSK 1412
            +G++++AF + ++ML+  + P++ T++ ++NG  K
Sbjct: 612  EGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646



 Score =  157 bits (398), Expect = 3e-35
 Identities = 100/378 (26%), Positives = 181/378 (47%)
 Frame = -3

Query: 1666 PSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSV 1487
            PS+   N L+    R      A +  N+ML  G+  +  T   ++    K+G++ +A   
Sbjct: 3    PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 1486 RNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIK 1307
              Q     +  +   ++  ++ L     +  A ++L+   + G+IP   TF S+I   +K
Sbjct: 63   FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 1306 EGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPA 1127
            EG++  AL +  +M   G   N+   TSL+ G+C +  +  AL +  E+   GL  +   
Sbjct: 123  EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 1126 YSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMC 947
            YS LIDG CK GN+  A + +SE+   G+  +    NS++ G+    + + A +++    
Sbjct: 183  YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 242

Query: 946  NEGIPCDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLE 767
              G+  ++ T+ TL+    + G +  A  L+ E++ KGI P+  +Y  +I G C K  + 
Sbjct: 243  ESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301

Query: 766  TAREVLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILV 587
             A +V  EM       N + +  L+ GYFK G+++ AF +   M +  ++P +TTL I++
Sbjct: 302  AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 361

Query: 586  NSKFEQEAPLVGNSAFLK 533
                +      G   F K
Sbjct: 362  KGLCKAGRSFEGRDLFNK 379



 Score =  125 bits (315), Expect = 1e-25
 Identities = 78/300 (26%), Positives = 145/300 (48%), Gaps = 1/300 (0%)
 Frame = -3

Query: 2638 HLLETSKRCPSDNRLFSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVR 2459
            H ++ +   P+D  L   ++    +AGR  +  + F + +    VP  +  N ++   ++
Sbjct: 343  HRMKDANILPTDTTL-GIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIK 401

Query: 2458 ADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAAT 2279
                  A ++++EM   G++    T   ++    K    + A +   +MK +G+++D   
Sbjct: 402  EGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKA 461

Query: 2278 YNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIV 2099
            Y T+I   CK+ D ++A ELL E++     P+ F Y+++I       N  EA+ L  ++V
Sbjct: 462  YGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 521

Query: 2098 GTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVR 1919
               +  +L   TSL+      G L  A +++ +M+  G+ P+    +VLI G    G   
Sbjct: 522  NEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFE 581

Query: 1918 KAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVE-CKVANVFTYNILL 1742
             A ++ E M    + P+V   N+LI G  K+   +EA RL DE ++   V +  TY+IL+
Sbjct: 582  NARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641


>ref|XP_004245400.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Solanum lycopersicum]
          Length = 850

 Score =  749 bits (1934), Expect = 0.0
 Identities = 375/777 (48%), Positives = 548/777 (70%), Gaps = 6/777 (0%)
 Frame = -3

Query: 2875 DSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGV-DALCITLHILMKSNIKS-- 2705
            D   T++HV++VLL+++ DP SA +YF+ A  QRGF+    D   + LHIL+ S +    
Sbjct: 65   DVKFTKNHVVDVLLSHRDDPDSAYRYFQTARLQRGFLHSKSDPFFVLLHILVNSAMHQHK 124

Query: 2704 ARYLLNQCXXXXXXXXXXXXVDHLLETSKRCPS--DNRLFSYVLNSYIQAGRIEDAAECF 2531
            +R LL+               + L++  K      + ++F+++++S ++A R+ DA +CF
Sbjct: 125  SRRLLDYYASSDSGPSATVVFNGLVKCGKTFDFGLNPKIFNFLVSSCMKANRLNDAIDCF 184

Query: 2530 GRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKE 2351
              ++  DI+  I   N LL  LVR  M G A DL+ +++ +G   DC T+ ++M ACL+E
Sbjct: 185  NAMLEHDIMLWIPIMNSLLKKLVRQGMVGVAEDLYTDIVSRGTHYDCGTVHILMEACLRE 244

Query: 2350 GKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAY 2171
            GK ++A +   E K  G++ DA  Y+  +Y  CK+ +   A +LL+EMK   W+PSE  Y
Sbjct: 245  GKMKEAVKLLEETKMSGIKFDAGLYSCGVYVACKEQNLSLALKLLEEMKCGGWVPSEGTY 304

Query: 2170 SNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIE 1991
            +N+I AC+KQGN V+ALRLKDE++    L NLV+ATSLMK Y +QG+L  AL+L+ +++E
Sbjct: 305  TNIILACVKQGNMVKALRLKDEMLSNGHLMNLVVATSLMKGYHLQGNLSSALDLFDKLVE 364

Query: 1990 SGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEE 1811
             G++PNK T++VLIEGC +NG+V KA  +Y +M+  GI    +  NSLI+GFL     +E
Sbjct: 365  YGLTPNKATYAVLIEGCCKNGDVEKALLVYRKMKLAGIKSNAYIENSLIKGFLNVDLLDE 424

Query: 1810 AMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILG 1631
            AM +FD ++    ANVF YN ++ WLCK+G+M +A N WDKM+  G++P+++SYN++ILG
Sbjct: 425  AMNVFDGAINSGTANVFVYNSIIAWLCKKGQMDKAQNTWDKMVANGILPTIISYNNIILG 484

Query: 1630 YCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPN 1451
             CR GNMD A+  F+++ ER +K NV+TYS L+DGYF+KGD ++A ++ +QM++  I+P 
Sbjct: 485  NCRNGNMDKALDFFSQLPERHLKANVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPT 544

Query: 1450 DFTFNTIINGLSKSGKTSEANNMLKGFMSEG-FIPTCMTFNSIIDGFIKEGSMDTALAIY 1274
            D+TFNT+I+G+SK GKTSEA ++LK  +  G  +PTCM++NS+IDGF+KE  + +AL++Y
Sbjct: 545  DYTFNTVISGMSKVGKTSEAKDLLKRIVEGGDLLPTCMSYNSLIDGFLKEDDVSSALSVY 604

Query: 1273 QEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKI 1094
            +EM   G+ P+VVTYT+LIDG CK N I+LALK+  E+R + ++LD+ AY+ LIDGFCK 
Sbjct: 605  REMCNSGISPDVVTYTTLIDGLCKSNNINLALKLLKEMRNKEIKLDVIAYAVLIDGFCKR 664

Query: 1093 GNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATY 914
             +M+ A ++F E+L VG+ PN  VYNS+++GF N++NMEAA+ L  +M NEG+PCDL TY
Sbjct: 665  RDMKSASELFDEILQVGISPNLFVYNSMMSGFINVNNMEAALVLRDKMINEGVPCDLKTY 724

Query: 913  TTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNR 734
            TTLID  L+ G +  AS L+TEML KGI PD  TYTVL+ GL NKGQ+E A ++L+EM +
Sbjct: 725  TTLIDGLLKDGKIDLASHLFTEMLGKGIMPDDITYTVLVHGLSNKGQVENAHKILEEMYK 784

Query: 733  KNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEA 563
            K+   +VLIYNTLIAGYFK+GNLQEAFRLHDEML++GL PD+ T DIL++ K +  +
Sbjct: 785  KSMTPSVLIYNTLIAGYFKEGNLQEAFRLHDEMLDKGLKPDDATYDILISGKLKDNS 841



 Score =  197 bits (502), Expect = 2e-47
 Identities = 112/408 (27%), Positives = 228/408 (55%), Gaps = 6/408 (1%)
 Frame = -3

Query: 2587 YVLNSYI----QAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQE 2420
            +V NS I    + G+++ A   + +++   I+P II  N ++    R     KALD F +
Sbjct: 441  FVYNSIIAWLCKKGQMDKAQNTWDKMVANGILPTIISYNNIILGNCRNGNMDKALDFFSQ 500

Query: 2419 MMVKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPD 2240
            +  + L  +  T  +++    ++G  +KAE  F +M + G+     T+NTVI  + K   
Sbjct: 501  LPERHLKANVVTYSILIDGYFRKGDADKAENMFDQMVSSGISPTDYTFNTVISGMSKVGK 560

Query: 2239 SRAACELLKEMKDK-NWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLAT 2063
            +  A +LLK + +  + +P+  +Y+++I   LK+ +   AL +  E+  + +  ++V  T
Sbjct: 561  TSEAKDLLKRIVEGGDLLPTCMSYNSLIDGFLKEDDVSSALSVYREMCNSGISPDVVTYT 620

Query: 2062 SLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAM 1883
            +L+   C   +++ AL L  +M    +  + + ++VLI+G  +  +++ A EL++++  +
Sbjct: 621  TLIDGLCKSNNINLALKLLKEMRNKEIKLDVIAYAVLIDGFCKRRDMKSASELFDEILQV 680

Query: 1882 GIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECKV-ANVFTYNILLQWLCKEGRMTEA 1706
            GI P +F  NS++ GF+     E A+ L D+ +   V  ++ TY  L+  L K+G++  A
Sbjct: 681  GISPNLFVYNSMMSGFINVNNMEAALVLRDKMINEGVPCDLKTYTTLIDGLLKDGKIDLA 740

Query: 1705 CNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDG 1526
             +L+ +M+ +G++P  ++Y  L+ G    G ++ A K   EM ++ + P+V+ Y+TL+ G
Sbjct: 741  SHLFTEMLGKGIMPDDITYTVLVHGLSNKGQVENAHKILEEMYKKSMTPSVLIYNTLIAG 800

Query: 1525 YFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNM 1382
            YFK+G++++AF + ++ML+  + P+D T++ +I+G  K       ++M
Sbjct: 801  YFKEGNLQEAFRLHDEMLDKGLKPDDATYDILISGKLKDNSFGRGSSM 848


>ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  704 bits (1817), Expect = 0.0
 Identities = 331/596 (55%), Positives = 454/596 (76%)
 Frame = -3

Query: 2359 LKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSE 2180
            ++EG   +AEQ+F + K RGVELD   Y+  ++ +C KP+S  A  LL+EM+   WIP E
Sbjct: 169  IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE 228

Query: 2179 FAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQ 2000
              +++VI AC+K+GN  EALRLKD++V      NL +ATSLMK YC+QG+L  AL L  +
Sbjct: 229  GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288

Query: 1999 MIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQF 1820
            + ESG+ PNKVT+SVLI+GC +NGN+ KA+E Y +M+  GI  +V++LNS++ G+LK Q 
Sbjct: 289  ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348

Query: 1819 WEEAMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHL 1640
            W+ A  +F++++E  +ANVFT+N LL WLCKEG+M EACNLWD+++ +G+ P+VVSYN++
Sbjct: 349  WQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNI 408

Query: 1639 ILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRI 1460
            ILG+CR  N++ A K + EML+ G  PN +T++ LMDGYFKKGD+E AFS+ ++M +  I
Sbjct: 409  ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 1459 APNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALA 1280
             P D T   II GL K+G++ E  ++   F+S+GF+PTCM +N+IIDGFIKEG+++ A  
Sbjct: 469  LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 1279 IYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFC 1100
            +Y+EM   G+ P+ VTYTSLIDGFCK N IDLALK+  +++ +GL++D+ AY  LIDGFC
Sbjct: 529  VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 1099 KIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLA 920
            K  +M+ AH++ +EL   GL PN  +YNS+ITGF+N++N+E A+ LY +M NEGIPCDL 
Sbjct: 589  KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648

Query: 919  TYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEM 740
            TYT+LID  L+ G LL+AS+++TEML+KGI PD   +TVLI GLCNKGQ E AR++L++M
Sbjct: 649  TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 708

Query: 739  NRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFE 572
            N KN   +VLIYNTLIAG+FK+GNLQEAFRLHDEML+RGLVPDN T DILVN KF+
Sbjct: 709  NGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 764



 Score =  299 bits (765), Expect = 7e-78
 Identities = 198/695 (28%), Positives = 341/695 (49%), Gaps = 36/695 (5%)
 Frame = -3

Query: 2875 DSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS-NIKSAR 2699
            +S LT+ HVI  LLN + DP SALKYF+  +K+  F +  DA+CI L IL  S     A+
Sbjct: 76   NSALTESHVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETHRAQ 135

Query: 2698 YLLNQCXXXXXXXXXXXXVDHLLETSKRCPSDNRLFSYVLNSYIQAGRIEDAAECFGRLI 2519
            YL +Q             +D L+E +K       L+++ L+  IQ G I +A + F +  
Sbjct: 136  YLFDQ-FASGKSVRFSCLMDRLVECTK-------LYNFPLD--IQEGNILEAEQHFLQAK 185

Query: 2518 RCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPE 2339
               +       +I +  L     +G AL L +EM   G      T   ++ AC+KEG   
Sbjct: 186  ARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVA 245

Query: 2338 KAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVI 2159
            +A +   +M   G  ++ A   +++   C + + R+A  L+ E+ +   +P++  YS +I
Sbjct: 246  EALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLI 305

Query: 2158 GACLKQGNTVEALRLKDEIVGTSL----------------------------------LA 2081
              C K GN  +A     E+    +                                  LA
Sbjct: 306  DGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA 365

Query: 2080 NLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELY 1901
            N+    +L+   C +G ++ A NL+ ++I  G+SPN V+++ +I G  R  N+  A ++Y
Sbjct: 366  NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 425

Query: 1900 EQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECKVANV-FTYNILLQWLCKE 1724
            ++M   G  P   T   L+ G+ K    E A  +F    +  +     T  I+++ LCK 
Sbjct: 426  KEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKA 485

Query: 1723 GRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITY 1544
            GR  E  +L++K +++G +P+ + YN +I G+ + GN++LA   + EM E GI P+ +TY
Sbjct: 486  GRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 545

Query: 1543 STLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMS 1364
            ++L+DG+ K  +++ A  + N M    +  +   + T+I+G  K      A+ +L     
Sbjct: 546  TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 605

Query: 1363 EGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDL 1184
             G  P    +NS+I GF    +++ A+ +Y++M  +G+  ++ TYTSLIDG  K  ++  
Sbjct: 606  AGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLY 665

Query: 1183 ALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLIT 1004
            A  + TE+  +G+  D  A++ LI+G C  G    A  I  ++    +IP+  +YN+LI 
Sbjct: 666  ASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIA 725

Query: 1003 GFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLID 899
            G     N++ A  L+  M + G+  D  TY  L++
Sbjct: 726  GHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760



 Score =  213 bits (541), Expect = 7e-52
 Identities = 119/462 (25%), Positives = 232/462 (50%), Gaps = 1/462 (0%)
 Frame = -3

Query: 2593 FSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMM 2414
            +S +++   + G IE A E +  +    I   +   N +L   ++      A  +F + +
Sbjct: 301  YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDAL 360

Query: 2413 VKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSR 2234
              GL+ + FT + ++    KEGK  +A   + E+  +G+  +  +YN +I   C+K +  
Sbjct: 361  ESGLA-NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 419

Query: 2233 AACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLM 2054
            AAC++ KEM D  + P+   ++ ++    K+G+   A  +   +   ++L        ++
Sbjct: 420  AACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 479

Query: 2053 KAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIP 1874
            K  C  G      +L+ + +  G  P  + ++ +I+G  + GN+  A  +Y +M  +GI 
Sbjct: 480  KGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGIT 539

Query: 1873 PTVFTLNSLIRGFLKDQFWEEAMRLFDESVECKV-ANVFTYNILLQWLCKEGRMTEACNL 1697
            P+  T  SLI GF K    + A++L ++     +  ++  Y  L+   CK   M  A  L
Sbjct: 540  PSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHEL 599

Query: 1696 WDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFK 1517
             +++   G+ P+   YN +I G+  + N++ A+  + +M+  GI  ++ TY++L+DG  K
Sbjct: 600  LNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 659

Query: 1516 KGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMT 1337
             G +  A  +  +ML+  I P+D     +INGL   G+   A  +L+    +  IP+ + 
Sbjct: 660  SGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLI 719

Query: 1336 FNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDG 1211
            +N++I G  KEG++  A  ++ EM  +G+ P+ +TY  L++G
Sbjct: 720  YNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  185 bits (469), Expect = 1e-43
 Identities = 106/395 (26%), Positives = 204/395 (51%), Gaps = 1/395 (0%)
 Frame = -3

Query: 2593 FSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMM 2414
            F+ +L+   + G++ +A   +  +I   I P ++  N ++    R D    A  +++EM+
Sbjct: 370  FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 429

Query: 2413 VKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSR 2234
              G + +  T  ++M    K+G  E A   F  MK   +     T   +I  +CK   S 
Sbjct: 430  DNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSF 489

Query: 2233 AACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLM 2054
               +L  +   + ++P+   Y+ +I   +K+GN   A  +  E+    +  + V  TSL+
Sbjct: 490  EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLI 549

Query: 2053 KAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIP 1874
              +C   ++D AL L   M   G+  +   +  LI+G  +  +++ A+EL  ++R  G+ 
Sbjct: 550  DGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLS 609

Query: 1873 PTVFTLNSLIRGFLKDQFWEEAMRLFDESV-ECKVANVFTYNILLQWLCKEGRMTEACNL 1697
            P  F  NS+I GF      EEA+ L+ + V E    ++ TY  L+  L K GR+  A ++
Sbjct: 610  PNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDI 669

Query: 1696 WDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFK 1517
              +M+++G++P   ++  LI G C  G  + A K   +M  + + P+V+ Y+TL+ G+FK
Sbjct: 670  HTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFK 729

Query: 1516 KGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSK 1412
            +G++++AF + ++ML+  + P++ T++ ++NG  K
Sbjct: 730  EGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 764



 Score =  147 bits (370), Expect = 5e-32
 Identities = 85/303 (28%), Positives = 152/303 (50%)
 Frame = -3

Query: 1441 FNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMP 1262
            ++  ++ L     +  A ++L+   + G+IP   TF S+I   +KEG++  AL +  +M 
Sbjct: 196  YSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMV 255

Query: 1261 AQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMR 1082
              G   N+   TSL+ G+C +  +  AL +  E+   GL  +   YS LIDG CK GN+ 
Sbjct: 256  NCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIE 315

Query: 1081 GAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLI 902
             A + +SE+   G+  +    NS++ G+    + + A +++      G+  ++ T+ TL+
Sbjct: 316  KAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLL 374

Query: 901  DVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTP 722
                + G +  A  L+ E++ KGI P+  +Y  +I G C K  +  A +V  EM      
Sbjct: 375  SWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFT 434

Query: 721  SNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPLVGNSA 542
             N + +  L+ GYFK G+++ AF +   M +  ++P +TTL I++    +      G   
Sbjct: 435  PNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDL 494

Query: 541  FLK 533
            F K
Sbjct: 495  FNK 497


>ref|XP_007136983.1| hypothetical protein PHAVU_009G090400g [Phaseolus vulgaris]
            gi|561010070|gb|ESW08977.1| hypothetical protein
            PHAVU_009G090400g [Phaseolus vulgaris]
          Length = 741

 Score =  679 bits (1753), Expect = 0.0
 Identities = 346/677 (51%), Positives = 477/677 (70%), Gaps = 5/677 (0%)
 Frame = -3

Query: 2896 EIASHRSDSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS 2717
            E  S  S  + +Q+ V++ LL  + DP SAL +FK  E++RGFV+ VD LC+ L IL  S
Sbjct: 50   EAQSPESPLIPSQNEVLDTLLLRKADPISALMFFKQVERKRGFVKTVDILCLLLQILASS 109

Query: 2716 --NIKSARYLLNQCXXXXXXXXXXXXVDHLLETSKRCP---SDNRLFSYVLNSYIQAGRI 2552
                  A+YLLN              V+ L+E ++R     SD+R+F+Y+LNSY++A +I
Sbjct: 110  PDTHGDAKYLLNNYVFGDSAPCAKVLVELLVECAERYGFELSDSRVFNYLLNSYVRANKI 169

Query: 2551 EDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVM 2372
             DA ECF  ++   ++P +   NILLTA+VR +M      ++ EM+ + L  DC+TL ++
Sbjct: 170  TDAVECFRTMLEHGVLPWVPIVNILLTAMVRRNMAYNVCQVYDEMVERELYGDCYTLHIL 229

Query: 2371 MHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNW 2192
            M ACLK G+  +A  YF E   RG++LDAA Y+ VI AVC+ PD   AC+LLKEMK+  W
Sbjct: 230  MRACLKGGRFAEAWNYFEEAVGRGLKLDAAAYSIVIQAVCRVPDLNLACKLLKEMKELGW 289

Query: 2191 IPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALN 2012
            +PSE  Y  VIGAC++QGN VEALRLKDE+V   +  N+V+ATSL+K +C++ D++ AL 
Sbjct: 290  VPSEGTYVAVIGACVRQGNFVEALRLKDEMVSKGVPMNVVVATSLIKGHCMRRDVNSALR 349

Query: 2011 LYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFL 1832
            ++ +++E+GV+PN   FSVLI+ C + GNV KA ELY +M+ MG+ PTVF +N L++GF 
Sbjct: 350  MFDEVVEAGVTPNVAMFSVLIDWCSKIGNVEKANELYTRMKLMGLQPTVFIVNFLLKGFR 409

Query: 1831 KDQFWEEAMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVS 1652
            K    E A  L DE+VE  +A+V TYNI+  WLC+ G++ EACNLWDKM+ +G+ PS+VS
Sbjct: 410  KQNLLENAYTLLDEAVENGIASVVTYNIVFLWLCELGKVNEACNLWDKMIGKGITPSLVS 469

Query: 1651 YNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQML 1472
            YNHLILG+C+ G MD A    N +++ G+KPNVITY+ LM+G FKKGD ++AF V +QM+
Sbjct: 470  YNHLILGHCKKGCMDDAYNVMNGIIKSGLKPNVITYTILMEGSFKKGDCDRAFDVFDQMV 529

Query: 1471 NWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMD 1292
               I P D+TFNTI+NGL K G+ SEA + L  F+ +GF+PT MT+N IIDGF+KEG++D
Sbjct: 530  AADIVPTDYTFNTIMNGLCKVGRVSEAKDKLNTFIKQGFVPTSMTYNCIIDGFVKEGAID 589

Query: 1291 TALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALI 1112
            +A + Y+EM   G+ PNV+T T+LI+GF K N+IDLALKM  +++ +GLELD+ AYSALI
Sbjct: 590  SAESTYREMCDSGISPNVITCTTLINGFFKTNKIDLALKMYDDMKSKGLELDITAYSALI 649

Query: 1111 DGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIP 932
            DGFCK+ +M  A  IFSELL+VGL PNT VYN +I+GFRNL+NMEAA++L+  M N  IP
Sbjct: 650  DGFCKMRDMENASKIFSELLEVGLTPNTIVYNIMISGFRNLNNMEAALNLHKEMINSKIP 709

Query: 931  CDLATYTTLIDVSLRVG 881
            CDL  YT+LI   L+ G
Sbjct: 710  CDLQVYTSLIGGLLKEG 726



 Score =  211 bits (536), Expect = 3e-51
 Identities = 140/547 (25%), Positives = 252/547 (46%), Gaps = 71/547 (12%)
 Frame = -3

Query: 2059 LMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMG 1880
            L+ +Y     +  A+  +  M+E GV P     ++L+    R        ++Y++M    
Sbjct: 159  LLNSYVRANKITDAVECFRTMLEHGVLPWVPIVNILLTAMVRRNMAYNVCQVYDEMVERE 218

Query: 1879 IPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECKVA-NVFTYNILLQWLCK-------- 1727
            +    +TL+ L+R  LK   + EA   F+E+V   +  +   Y+I++Q +C+        
Sbjct: 219  LYGDCYTLHILMRACLKGGRFAEAWNYFEEAVGRGLKLDAAAYSIVIQAVCRVPDLNLAC 278

Query: 1726 ---------------------------EGRMTEACNLWDKMMNEGVIPSVVSYNHLILGY 1628
                                       +G   EA  L D+M+++GV  +VV    LI G+
Sbjct: 279  KLLKEMKELGWVPSEGTYVAVIGACVRQGNFVEALRLKDEMVSKGVPMNVVVATSLIKGH 338

Query: 1627 CRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPND 1448
            C   +++ A++ F+E++E G+ PNV  +S L+D   K G+VE+A  +  +M    + P  
Sbjct: 339  CMRRDVNSALRMFDEVVEAGVTPNVAMFSVLIDWCSKIGNVEKANELYTRMKLMGLQPTV 398

Query: 1447 FTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQE 1268
            F  N ++ G  K      A  +L   +  G I + +T+N +     + G ++ A  ++ +
Sbjct: 399  FIVNFLLKGFRKQNLLENAYTLLDEAVENG-IASVVTYNIVFLWLCELGKVNEACNLWDK 457

Query: 1267 MPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALID------- 1109
            M  +G+ P++V+Y  LI G CKK  +D A  +   +   GL+ ++  Y+ L++       
Sbjct: 458  MIGKGITPSLVSYNHLILGHCKKGCMDDAYNVMNGIIKSGLKPNVITYTILMEGSFKKGD 517

Query: 1108 ----------------------------GFCKIGNMRGAHDIFSELLDVGLIPNTAVYNS 1013
                                        G CK+G +  A D  +  +  G +P +  YN 
Sbjct: 518  CDRAFDVFDQMVAADIVPTDYTFNTIMNGLCKVGRVSEAKDKLNTFIKQGFVPTSMTYNC 577

Query: 1012 LITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLRVGNLLFASELYTEMLTKG 833
            +I GF     +++A S Y  MC+ GI  ++ T TTLI+   +   +  A ++Y +M +KG
Sbjct: 578  IIDGFVKEGAIDSAESTYREMCDSGISPNVITCTTLINGFFKTNKIDLALKMYDDMKSKG 637

Query: 832  IEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAF 653
            +E D T Y+ LI G C    +E A ++  E+       N ++YN +I+G+    N++ A 
Sbjct: 638  LELDITAYSALIDGFCKMRDMENASKIFSELLEVGLTPNTIVYNIMISGFRNLNNMEAAL 697

Query: 652  RLHDEML 632
             LH EM+
Sbjct: 698  NLHKEMI 704



 Score =  184 bits (466), Expect = 3e-43
 Identities = 114/465 (24%), Positives = 227/465 (48%), Gaps = 1/465 (0%)
 Frame = -3

Query: 1963 FSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESV 1784
            F+ L+    R   +  A E +  M   G+ P V  +N L+   ++        +++DE V
Sbjct: 156  FNYLLNSYVRANKITDAVECFRTMLEHGVLPWVPIVNILLTAMVRRNMAYNVCQVYDEMV 215

Query: 1783 ECKV-ANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMD 1607
            E ++  + +T +IL++   K GR  EA N +++ +  G+     +Y+ +I   CR+ +++
Sbjct: 216  ERELYGDCYTLHILMRACLKGGRFAEAWNYFEEAVGRGLKLDAAAYSIVIQAVCRVPDLN 275

Query: 1606 LAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTII 1427
            LA K   EM E G  P+  TY  ++    ++G+  +A  ++++M++  +  N     ++I
Sbjct: 276  LACKLLKEMKELGWVPSEGTYVAVIGACVRQGNFVEALRLKDEMVSKGVPMNVVVATSLI 335

Query: 1426 NGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVF 1247
             G       + A  M    +  G  P    F+ +ID   K G+++ A  +Y  M   G+ 
Sbjct: 336  KGHCMRRDVNSALRMFDEVVEAGVTPNVAMFSVLIDWCSKIGNVEKANELYTRMKLMGLQ 395

Query: 1246 PNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDI 1067
            P V     L+ GF K+N ++ A  +  E    G+   +  Y+ +    C++G +  A ++
Sbjct: 396  PTVFIVNFLLKGFRKQNLLENAYTLLDEAVENGIA-SVVTYNIVFLWLCELGKVNEACNL 454

Query: 1066 FSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVSLR 887
            + +++  G+ P+   YN LI G      M+ A ++   +   G+  ++ TYT L++ S +
Sbjct: 455  WDKMIGKGITPSLVSYNHLILGHCKKGCMDDAYNVMNGIIKSGLKPNVITYTILMEGSFK 514

Query: 886  VGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLI 707
             G+   A +++ +M+   I P   T+  ++ GLC  G++  A++ L+   ++      + 
Sbjct: 515  KGDCDRAFDVFDQMVAADIVPTDYTFNTIMNGLCKVGRVSEAKDKLNTFIKQGFVPTSMT 574

Query: 706  YNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFE 572
            YN +I G+ K+G +  A   + EM + G+ P+  T   L+N  F+
Sbjct: 575  YNCIIDGFVKEGAIDSAESTYREMCDSGISPNVITCTTLINGFFK 619



 Score =  169 bits (427), Expect = 1e-38
 Identities = 105/418 (25%), Positives = 201/418 (48%), Gaps = 1/418 (0%)
 Frame = -3

Query: 2623 SKRCPSDNRLFSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTG 2444
            SK  P +  + + ++  +     +  A   F  ++   + P +   ++L+    +     
Sbjct: 321  SKGVPMNVVVATSLIKGHCMRRDVNSALRMFDEVVEAGVTPNVAMFSVLIDWCSKIGNVE 380

Query: 2443 KALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVI 2264
            KA +L+  M + GL    F ++ ++    K+   E A     E    G+     TYN V 
Sbjct: 381  KANELYTRMKLMGLQPTVFIVNFLLKGFRKQNLLENAYTLLDEAVENGIA-SVVTYNIVF 439

Query: 2263 YAVCKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLL 2084
              +C+      AC L  +M  K   PS  +Y+++I    K+G   +A  + + I+ + L 
Sbjct: 440  LWLCELGKVNEACNLWDKMIGKGITPSLVSYNHLILGHCKKGCMDDAYNVMNGIIKSGLK 499

Query: 2083 ANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYEL 1904
             N++  T LM+    +GD D A +++ QM+ + + P   TF+ ++ G  + G V +A + 
Sbjct: 500  PNVITYTILMEGSFKKGDCDRAFDVFDQMVAADIVPTDYTFNTIMNGLCKVGRVSEAKDK 559

Query: 1903 YEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECKVA-NVFTYNILLQWLCK 1727
                   G  PT  T N +I GF+K+   + A   + E  +  ++ NV T   L+    K
Sbjct: 560  LNTFIKQGFVPTSMTYNCIIDGFVKEGAIDSAESTYREMCDSGISPNVITCTTLINGFFK 619

Query: 1726 EGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVIT 1547
              ++  A  ++D M ++G+   + +Y+ LI G+C++ +M+ A K F+E+LE G+ PN I 
Sbjct: 620  TNKIDLALKMYDDMKSKGLELDITAYSALIDGFCKMRDMENASKIFSELLEVGLTPNTIV 679

Query: 1546 YSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKG 1373
            Y+ ++ G+    ++E A ++  +M+N +I  +   + ++I GL K G   +     KG
Sbjct: 680  YNIMISGFRNLNNMEAALNLHKEMINSKIPCDLQVYTSLIGGLLKEGTARKCRQDSKG 737



 Score =  153 bits (386), Expect = 6e-34
 Identities = 106/432 (24%), Positives = 203/432 (46%), Gaps = 34/432 (7%)
 Frame = -3

Query: 1756 YNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEML 1577
            +N LL    +  ++T+A   +  M+  GV+P V   N L+    R        + ++EM+
Sbjct: 156  FNYLLNSYVRANKITDAVECFRTMLEHGVLPWVPIVNILLTAMVRRNMAYNVCQVYDEMV 215

Query: 1576 ERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTS 1397
            ER +  +  T   LM    K G   +A++   + +   +  +   ++ +I  + +    +
Sbjct: 216  ERELYGDCYTLHILMRACLKGGRFAEAWNYFEEAVGRGLKLDAAAYSIVIQAVCRVPDLN 275

Query: 1396 EANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLI 1217
             A  +LK     G++P+  T+ ++I   +++G+   AL +  EM ++GV  NVV  TSLI
Sbjct: 276  LACKLLKEMKELGWVPSEGTYVAVIGACVRQGNFVEALRLKDEMVSKGVPMNVVVATSLI 335

Query: 1216 DGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLI 1037
             G C +  ++ AL+M  E+   G+  ++  +S LID   KIGN+  A+++++ +  +GL 
Sbjct: 336  KGHCMRRDVNSALRMFDEVVEAGVTPNVAMFSVLIDWCSKIGNVEKANELYTRMKLMGLQ 395

Query: 1036 PNTAVYNSLITGFRN----------------------------------LSNMEAAMSLY 959
            P   + N L+ GFR                                   L  +  A +L+
Sbjct: 396  PTVFIVNFLLKGFRKQNLLENAYTLLDEAVENGIASVVTYNIVFLWLCELGKVNEACNLW 455

Query: 958  GRMCNEGIPCDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNK 779
             +M  +GI   L +Y  LI    + G +  A  +   ++  G++P+  TYT+L++G   K
Sbjct: 456  DKMIGKGITPSLVSYNHLILGHCKKGCMDDAYNVMNGIIKSGLKPNVITYTILMEGSFKK 515

Query: 778  GQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTL 599
            G  + A +V D+M   +       +NT++ G  K G + EA    +  +++G VP + T 
Sbjct: 516  GDCDRAFDVFDQMVAADIVPTDYTFNTIMNGLCKVGRVSEAKDKLNTFIKQGFVPTSMTY 575

Query: 598  DILVNSKFEQEA 563
            + +++   ++ A
Sbjct: 576  NCIIDGFVKEGA 587


>ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297322117|gb|EFH52538.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 850

 Score =  659 bits (1700), Expect = 0.0
 Identities = 349/772 (45%), Positives = 502/772 (65%), Gaps = 7/772 (0%)
 Frame = -3

Query: 2851 VIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKSNIKSAR---YLLNQC 2681
            VI+VLLN +++P +AL+++ WA   RG     D   + +HIL+ S     R    L+   
Sbjct: 74   VIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVTSPETYGRASDLLIRYV 133

Query: 2680 XXXXXXXXXXXXVDHLLETSKRCPSD--NRLFSYVLNSYIQAGRIEDAAECFGRLIRCDI 2507
                        V +L++++K    +  +R F+Y+LN+Y +  + + A +   +++   +
Sbjct: 134  STSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGV 193

Query: 2506 VPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKAEQ 2327
            +P +   N  L+ALV+ +   +A +L+  M+  G+  D  T  ++M A L+E KP +A +
Sbjct: 194  IPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALE 253

Query: 2326 YFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNW-IPSEFAYSNVIGAC 2150
             F     RG E D+  Y+  + A CK  +   A  LL+EMK+K   +PS+  Y++VI A 
Sbjct: 254  VFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILAS 313

Query: 2149 LKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNK 1970
            +KQGN  +A+R KDE+V   +  N+V ATSL+  +C   DL  AL+L+ +M   G SPN 
Sbjct: 314  VKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNS 373

Query: 1969 VTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDE 1790
            VTFSVLIE   +NG + KA E Y++M ++G+ P+VF ++++I+G+LK Q  EEA++LFDE
Sbjct: 374  VTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 433

Query: 1789 SVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNM 1610
            S E  +ANVF  N +L WLCK+G++ +A  L  KM + G+ P+VVSYN+++L +CR  NM
Sbjct: 434  SFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNM 493

Query: 1609 DLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTI 1430
            DLA   F+ MLE+G+KPN  TYS L+DG FK  D +    V NQM +  I  N   + TI
Sbjct: 494  DLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTI 553

Query: 1429 INGLSKSGKTSEANNMLKGFMSEG-FIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQG 1253
            INGL K G+TS+A  +L   + E  F  +CM++NSIIDGFIKEG MD A+A Y+EM A G
Sbjct: 554  INGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANG 613

Query: 1252 VFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAH 1073
            + PNV+TYTSL+DG CK N++D AL+MR E++ +G++LD+PAY ALI GFCK  NM  A 
Sbjct: 614  ISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESAS 673

Query: 1072 DIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLIDVS 893
             +FSELL+ GL P+  VYNSLI+GFRNL NM AA+ LY +M  +G+ CDL TYTTLID  
Sbjct: 674  ALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 733

Query: 892  LRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNV 713
            L+ GNL+ AS+LYTEM   G+ PD   YTV++ GL  KGQ     ++ +EM + N   NV
Sbjct: 734  LKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNV 793

Query: 712  LIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAPL 557
            LIYN +IAG++++GNL EAFRLHDEML++G++PD  T DILV+ K  +  P+
Sbjct: 794  LIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPI 845


>ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297325627|gb|EFH56047.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 867

 Score =  658 bits (1697), Expect = 0.0
 Identities = 341/781 (43%), Positives = 528/781 (67%), Gaps = 6/781 (0%)
 Frame = -3

Query: 2893 IASHRSDSVLTQDHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKS- 2717
            I++  +D+ +   HVIEVLL  ++DP SAL+Y  W +  R    G D   + +HIL  S 
Sbjct: 68   ISTSETDNHVDDAHVIEVLLGRRNDPVSALQYCNWVKPLRSLCEGGDVFWVLIHILFSSP 127

Query: 2716 -NIKSARYLLNQCXXXXXXXXXXXXVDHLLETSKRCPSD--NRLFSYVLNSYIQAGRIED 2546
                 A  LL               V++L+++SKR   +  +R F+Y+LN+YI+  R++ 
Sbjct: 128  HTHDRASNLLVMFVSSNPTLIPSAMVNNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDY 187

Query: 2545 AAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMH 2366
            A +CF  ++  ++VP +   N +L++LVR+++  +A +++ +M++ G++ D  T  ++M 
Sbjct: 188  AVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMR 247

Query: 2365 ACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNWIP 2186
            A L+E KPE+A + FR + +RG E D   ++  + A CK  D   A +LL+EM++K  +P
Sbjct: 248  ASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVP 307

Query: 2185 -SEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNL 2009
             S+  Y++VI AC+K+GN  EA+++KDE+VG  +  +++ ATSL+  +C   +L  AL+ 
Sbjct: 308  ASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDF 367

Query: 2008 YAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLK 1829
            + +M E G++P+KV FSV+IE   +N  + KA E+Y++M+++GI P+   ++ +I+G LK
Sbjct: 368  FNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLK 427

Query: 1828 DQFWEEAMRLFDESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSY 1649
             +  E A+ +F++S E  +A+ F  N +   LCK+G++  A +    M N+G+ P+VV Y
Sbjct: 428  AESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFY 487

Query: 1648 NHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLN 1469
            N+++L +CR+ NMDLA   F+EMLE+G++PN  TYS L+DG+FK  D + A+ V NQM+ 
Sbjct: 488  NNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIA 547

Query: 1468 WRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEG-FIPTCMTFNSIIDGFIKEGSMD 1292
                 N+  +NTIINGL K G+TS+A  ML+  + E  +   C ++NSIIDGF KEG  D
Sbjct: 548  SNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTD 607

Query: 1291 TALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALI 1112
            +A+  Y+EM   G+ PNVVT+TSLI+GFCK N++DLAL+M  E++ + L+LD+PAY ALI
Sbjct: 608  SAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALI 667

Query: 1111 DGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIP 932
            DGFCK  +M+ A+ +FSELL++GL+PN +VYN+LI+GFRNL  M+AA+ LY +M N+GI 
Sbjct: 668  DGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGIS 727

Query: 931  CDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREV 752
            CDL TYTT+ID  L+ GNL+ AS+LY+E+L  GI PD   Y VL+ GL  KGQ   A ++
Sbjct: 728  CDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKM 787

Query: 751  LDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFE 572
            L+EM +K+   NVLIY+T+IAG+ ++GNL EAFR+HDEMLE+GLV D+T  ++LV+ + E
Sbjct: 788  LEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVE 847

Query: 571  Q 569
            +
Sbjct: 848  K 848



 Score =  149 bits (375), Expect = 1e-32
 Identities = 97/364 (26%), Positives = 180/364 (49%), Gaps = 1/364 (0%)
 Frame = -3

Query: 1654 SYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQM 1475
            ++N+L+  Y R   MD AV  FN M++R + P V   + ++    +   +++A  + N+M
Sbjct: 171  AFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKM 230

Query: 1474 LNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSM 1295
            +   +A ++ T   ++    +  K  EA  + +  MS G  P  + F+  +    K   +
Sbjct: 231  VLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQAACKMKDL 290

Query: 1294 DTALAIYQEMPAQGVFP-NVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSA 1118
              AL + +EM  +G  P +  TYTS+I    K+  ++ A+K++ E+   G+ + + A ++
Sbjct: 291  VMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATS 350

Query: 1117 LIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEG 938
            LI GFC    +  A D F+ + + GL P+  +++ +I  F     ME A+ +Y RM + G
Sbjct: 351  LITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVG 410

Query: 937  IPCDLATYTTLIDVSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAR 758
            I         +I   L+  +   A E++ +     I   F    + +  LC +G+++ A 
Sbjct: 411  IAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLL-LCKQGKVDAAT 469

Query: 757  EVLDEMNRKNTPSNVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSK 578
              L  M  K    NV+ YN ++  + +  N+  A  +  EMLE+GL P+N T  IL++  
Sbjct: 470  SFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGF 529

Query: 577  FEQE 566
            F+ +
Sbjct: 530  FKNQ 533



 Score = 85.9 bits (211), Expect = 1e-13
 Identities = 58/278 (20%), Positives = 126/278 (45%), Gaps = 1/278 (0%)
 Frame = -3

Query: 1390 NNMLKGFMSEGFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDG 1211
            NN++       F  +   FN +++ +I+   MD A+  +  M  + V P V    +++  
Sbjct: 154  NNLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSS 213

Query: 1210 FCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPN 1031
              + N ID A ++  ++ + G+  D      L+    +      A  IF  ++  G  P+
Sbjct: 214  LVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPD 273

Query: 1030 TAVYNSLITGFRNLSNMEAAMSLYGRMCNEG-IPCDLATYTTLIDVSLRVGNLLFASELY 854
              +++  +     + ++  A+ L   M  +G +P    TYT++I   ++ GN+  A ++ 
Sbjct: 274  GLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVK 333

Query: 853  TEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPSNVLIYNTLIAGYFKD 674
             EM+  GI       T LI G CN  +L  A +  + M  +    + ++++ +I  + K+
Sbjct: 334  DEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKN 393

Query: 673  GNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAP 560
              +++A  ++  M   G+ P +  +  ++    + E+P
Sbjct: 394  MEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESP 431


>ref|XP_006290588.1| hypothetical protein CARUB_v10016679mg [Capsella rubella]
            gi|565465250|ref|XP_006290589.1| hypothetical protein
            CARUB_v10016679mg [Capsella rubella]
            gi|482559295|gb|EOA23486.1| hypothetical protein
            CARUB_v10016679mg [Capsella rubella]
            gi|482559296|gb|EOA23487.1| hypothetical protein
            CARUB_v10016679mg [Capsella rubella]
          Length = 862

 Score =  657 bits (1695), Expect = 0.0
 Identities = 349/773 (45%), Positives = 499/773 (64%), Gaps = 7/773 (0%)
 Frame = -3

Query: 2857 DHVIEVLLNNQHDPRSALKYFKWAEKQRGFVRGVDALCITLHILMKSNIKSAR---YLLN 2687
            + VI+VLLN +++P SAL+++ WA   RG     D   + +H+L+ S     R    L+ 
Sbjct: 75   ESVIDVLLNRRNNPESALRFYNWARPWRGSFEDGDVFWVLVHVLVGSPETYGRARDLLMR 134

Query: 2686 QCXXXXXXXXXXXXVDHLLETSKRCPSD--NRLFSYVLNSYIQAGRIEDAAECFGRLIRC 2513
                          V +L++++K    +  +R F+Y+LN+Y Q  + + A +   +++  
Sbjct: 135  YVSTSNPTPMPSVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSQKRQTDYAVDIINQMLEL 194

Query: 2512 DIVPRIIDRNILLTALVRADMTGKALDLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKA 2333
             ++P +   N  L+ALV+ +   +A +L+  M+  G+  D  T  ++M A L+E  PE+A
Sbjct: 195  GVIPFVPYVNRTLSALVQRNSMTEAKELYSRMISLGVDGDNGTTQLLMRASLREENPEEA 254

Query: 2332 EQYFREMKTRGVELDAATYNTVIYAVCKKPDSRAACELLKEMKDKNW-IPSEFAYSNVIG 2156
             + F     RG E +   Y+  + A CK  +   A  LL+EMK+K   +PS+  Y++VI 
Sbjct: 255  LEAFTRAIERGAEPNGVLYSIAVQACCKTLNLAMAESLLREMKEKTLCVPSQQTYTSVIL 314

Query: 2155 ACLKQGNTVEALRLKDEIVGTSLLANLVLATSLMKAYCVQGDLDGALNLYAQMIESGVSP 1976
            A +KQGN  EA+R KDE+V   +  N+V ATSL+  YC   D   AL L+ +M + G SP
Sbjct: 315  ASVKQGNMEEAVRFKDEMVSGGIPMNVVAATSLITGYCKNNDFGSALELFHKMEKEGPSP 374

Query: 1975 NKVTFSVLIEGCYRNGNVRKAYELYEQMRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLF 1796
            N VTFSVLIE   +NG + KA+E Y++M  +G+ P+VF ++++I+G L+ Q  EEA++LF
Sbjct: 375  NSVTFSVLIEWLSKNGEIAKAFEFYKKMEGLGLTPSVFHVHTIIQGCLRGQKEEEALKLF 434

Query: 1795 DESVECKVANVFTYNILLQWLCKEGRMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLG 1616
            DES E  +ANVF  N +L W CK+G++ +A  L  KM + G+ P+VVSYN+++L YCR  
Sbjct: 435  DESFETGLANVFICNSILSWFCKQGKIDKATELLVKMESRGLGPNVVSYNNVMLAYCRKK 494

Query: 1615 NMDLAVKAFNEMLERGIKPNVITYSTLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFN 1436
            NM+LA   F  MLE+G+KPN  TYS L+DG FK  D + A  V NQM++  I  N     
Sbjct: 495  NMELARTVFANMLEKGLKPNNYTYSILIDGCFKNHDEQNALEVVNQMISSGIEVNGVVSQ 554

Query: 1435 TIINGLSKSGKTSEANNMLKGFMSEG-FIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPA 1259
            TIINGL K G+TS+A  ++   + E  F  +CM++NSIIDG IKEG MD+A+A Y+EM  
Sbjct: 555  TIINGLCKVGQTSKARELMANMIEEKRFCVSCMSYNSIIDGLIKEGEMDSAVAAYREMCG 614

Query: 1258 QGVFPNVVTYTSLIDGFCKKNQIDLALKMRTELRIQGLELDLPAYSALIDGFCKIGNMRG 1079
             G+ PNV+TYTSL+DG CK N++D AL+MR E++ +GL+LD+PAY ALIDGFCK  NM  
Sbjct: 615  NGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGLKLDIPAYGALIDGFCKKSNMES 674

Query: 1078 AHDIFSELLDVGLIPNTAVYNSLITGFRNLSNMEAAMSLYGRMCNEGIPCDLATYTTLID 899
            A  +FSELL+ GL P+  VYNSLI+GFRNL NM AA+ LY +M  +G+ CDL TYTTLID
Sbjct: 675  ASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLID 734

Query: 898  VSLRVGNLLFASELYTEMLTKGIEPDFTTYTVLIKGLCNKGQLETAREVLDEMNRKNTPS 719
              L+ GNL+ AS+LYTEML  G+ PD   YTV++ GL  KGQ     ++ +EM + N   
Sbjct: 735  GLLKEGNLILASDLYTEMLAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTP 794

Query: 718  NVLIYNTLIAGYFKDGNLQEAFRLHDEMLERGLVPDNTTLDILVNSKFEQEAP 560
            NVLIYN +IAG++++GNL EAFRLHDEML++G++PD  T DILV+ K  +  P
Sbjct: 795  NVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQP 847



 Score =  254 bits (648), Expect = 3e-64
 Identities = 150/554 (27%), Positives = 290/554 (52%), Gaps = 2/554 (0%)
 Frame = -3

Query: 2614 CPSDNRLFSYVLNSYIQAGRIEDAAECFGRLIRCDIVPRIIDRNILLTALVRADMTGKAL 2435
            C    + ++ V+ + ++ G +E+A      ++   I   ++    L+T   + +  G AL
Sbjct: 302  CVPSQQTYTSVILASVKQGNMEEAVRFKDEMVSGGIPMNVVAATSLITGYCKNNDFGSAL 361

Query: 2434 DLFQEMMVKGLSCDCFTLDVMMHACLKEGKPEKAEQYFREMKTRGVELDAATYNTVIYAV 2255
            +LF +M  +G S +  T  V++    K G+  KA +++++M+  G+       +T+I   
Sbjct: 362  ELFHKMEKEGPSPNSVTFSVLIEWLSKNGEIAKAFEFYKKMEGLGLTPSVFHVHTIIQGC 421

Query: 2254 CKKPDSRAACELLKEMKDKNWIPSEFAYSNVIGACLKQGNTVEALRLKDEIVGTSLLANL 2075
             +      A +L  E  +   + + F  ++++    KQG   +A  L  ++    L  N+
Sbjct: 422  LRGQKEEEALKLFDESFETG-LANVFICNSILSWFCKQGKIDKATELLVKMESRGLGPNV 480

Query: 2074 VLATSLMKAYCVQGDLDGALNLYAQMIESGVSPNKVTFSVLIEGCYRNGNVRKAYELYEQ 1895
            V   ++M AYC + +++ A  ++A M+E G+ PN  T+S+LI+GC++N + + A E+  Q
Sbjct: 481  VSYNNVMLAYCRKKNMELARTVFANMLEKGLKPNNYTYSILIDGCFKNHDEQNALEVVNQ 540

Query: 1894 MRAMGIPPTVFTLNSLIRGFLKDQFWEEAMRLFDESVECK--VANVFTYNILLQWLCKEG 1721
            M + GI        ++I G  K     +A  L    +E K    +  +YN ++  L KEG
Sbjct: 541  MISSGIEVNGVVSQTIINGLCKVGQTSKARELMANMIEEKRFCVSCMSYNSIIDGLIKEG 600

Query: 1720 RMTEACNLWDKMMNEGVIPSVVSYNHLILGYCRLGNMDLAVKAFNEMLERGIKPNVITYS 1541
             M  A   + +M   G+ P+V++Y  L+ G C+   MD A++  +EM  +G+K ++  Y 
Sbjct: 601  EMDSAVAAYREMCGNGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGLKLDIPAYG 660

Query: 1540 TLMDGYFKKGDVEQAFSVRNQMLNWRIAPNDFTFNTIINGLSKSGKTSEANNMLKGFMSE 1361
             L+DG+ KK ++E A ++ +++L   + P+   +N++I+G    G    A ++ K  + +
Sbjct: 661  ALIDGFCKKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKD 720

Query: 1360 GFIPTCMTFNSIIDGFIKEGSMDTALAIYQEMPAQGVFPNVVTYTSLIDGFCKKNQIDLA 1181
            G      T+ ++IDG +KEG++  A  +Y EM A G+ P+ + YT +++G  KK Q    
Sbjct: 721  GLRCDLGTYTTLIDGLLKEGNLILASDLYTEMLAVGLVPDEIMYTVIVNGLSKKGQFVKV 780

Query: 1180 LKMRTELRIQGLELDLPAYSALIDGFCKIGNMRGAHDIFSELLDVGLIPNTAVYNSLITG 1001
            +KM  E++   +  ++  Y+A+I G  + GN+  A  +  E+LD G++P+ A ++ L++G
Sbjct: 781  VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 840

Query: 1000 FRNLSNMEAAMSLY 959
                   + A SL+
Sbjct: 841  KVGKFQPKRAASLW 854


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