BLASTX nr result
ID: Sinomenium22_contig00032161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00032161
(419 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI30135.3| unnamed protein product [Vitis vinifera] 98 1e-18
ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arab... 96 5e-18
ref|XP_006302032.1| hypothetical protein CARUB_v10020014mg [Caps... 95 9e-18
ref|XP_002522167.1| pentatricopeptide repeat-containing protein,... 95 9e-18
ref|XP_007028356.1| Pentatricopeptide repeat-containing protein ... 95 1e-17
ref|XP_007028355.1| Pentatricopeptide repeat-containing protein ... 95 1e-17
gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis] 93 3e-17
gb|EXB57070.1| hypothetical protein L484_000824 [Morus notabilis] 93 3e-17
gb|EXB28627.1| hypothetical protein L484_003150 [Morus notabilis] 93 3e-17
ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citr... 93 3e-17
ref|NP_178143.1| pentatricopeptide repeat-containing protein [Ar... 93 4e-17
ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Popu... 91 1e-16
dbj|BAD95295.1| hypothetical protein [Arabidopsis thaliana] 91 1e-16
ref|XP_007145936.1| hypothetical protein PHAVU_007G280400g [Phas... 89 6e-16
ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Caps... 88 1e-15
ref|XP_006389776.1| hypothetical protein EUTSA_v10018611mg [Eutr... 87 2e-15
ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subs... 87 3e-15
>emb|CBI30135.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+QCL+QAY++AKAPAYG ++RMKADNIFPN+ VA QL QVDAFRK+A+SDLLD
Sbjct: 568 RLRQFQCLIQAYVNAKAPAYGIKERMKADNIFPNRVVAGQLAQVDAFRKSAVSDLLD 624
>ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Vitis vinifera]
Length = 587
Score = 98.2 bits (243), Expect = 1e-18
Identities = 44/57 (77%), Positives = 53/57 (92%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+QCL+QAY++AKAPAYG ++RMKADNIFPN+ VA QL QVDAFRK+A+SDLLD
Sbjct: 531 RLRQFQCLIQAYVNAKAPAYGIKERMKADNIFPNRVVAGQLAQVDAFRKSAVSDLLD 587
>ref|XP_002889301.1| hypothetical protein ARALYDRAFT_477224 [Arabidopsis lyrata subsp.
lyrata] gi|297335142|gb|EFH65560.1| hypothetical protein
ARALYDRAFT_477224 [Arabidopsis lyrata subsp. lyrata]
Length = 597
Score = 95.9 bits (237), Expect = 5e-18
Identities = 46/57 (80%), Positives = 52/57 (91%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q LLQAYI+AKAPAYG RDRMKADNIFPNK++AAQL Q D F+KTAISD+LD
Sbjct: 541 RLRQFQALLQAYINAKAPAYGMRDRMKADNIFPNKSMAAQLAQGDPFKKTAISDILD 597
>ref|XP_006302032.1| hypothetical protein CARUB_v10020014mg [Capsella rubella]
gi|565488787|ref|XP_006302033.1| hypothetical protein
CARUB_v10020014mg [Capsella rubella]
gi|482570742|gb|EOA34930.1| hypothetical protein
CARUB_v10020014mg [Capsella rubella]
gi|482570743|gb|EOA34931.1| hypothetical protein
CARUB_v10020014mg [Capsella rubella]
Length = 598
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+QAYI+AKAPAYG RDRMKADNIFPNK++AAQL Q D F+KTAISD+LD
Sbjct: 542 RLRQFQALMQAYINAKAPAYGMRDRMKADNIFPNKSMAAQLAQGDPFKKTAISDILD 598
>ref|XP_002522167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538605|gb|EEF40208.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 342
Score = 95.1 bits (235), Expect = 9e-18
Identities = 45/57 (78%), Positives = 52/57 (91%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+Q YI+AKAPAYG R+RMKADNIFPNKA+AAQL VDAFRKTA++DLLD
Sbjct: 286 RLRQFQALVQTYINAKAPAYGIRERMKADNIFPNKALAAQLALVDAFRKTAVTDLLD 342
>ref|XP_007028356.1| Pentatricopeptide repeat-containing protein isoform 2, partial
[Theobroma cacao] gi|508716961|gb|EOY08858.1|
Pentatricopeptide repeat-containing protein isoform 2,
partial [Theobroma cacao]
Length = 621
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+QAY++AKAPAYG R+RMKADNIFPNKA+A QL QVDAFRK A SDLLD
Sbjct: 565 RLRQFQSLVQAYVNAKAPAYGIRERMKADNIFPNKALATQLAQVDAFRKNAASDLLD 621
>ref|XP_007028355.1| Pentatricopeptide repeat-containing protein isoform 1 [Theobroma
cacao] gi|508716960|gb|EOY08857.1| Pentatricopeptide
repeat-containing protein isoform 1 [Theobroma cacao]
Length = 623
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+QAY++AKAPAYG R+RMKADNIFPNKA+A QL QVDAFRK A SDLLD
Sbjct: 567 RLRQFQSLVQAYVNAKAPAYGIRERMKADNIFPNKALATQLAQVDAFRKNAASDLLD 623
>gb|EXC46728.1| hypothetical protein L484_002071 [Morus notabilis]
Length = 623
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R RQ+Q L+QAY++AK PAYG R+RMKADNIFPN+A+AAQL QVDAFRKTA S+LLD
Sbjct: 567 RFRQFQALIQAYVNAKTPAYGIRERMKADNIFPNRALAAQLTQVDAFRKTAASELLD 623
>gb|EXB57070.1| hypothetical protein L484_000824 [Morus notabilis]
Length = 87
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R RQ+Q L+QAY++AK PAYG R+RMKADNIFPN+A+AAQL QVDAFRKTA S+LLD
Sbjct: 31 RFRQFQALIQAYVNAKTPAYGIRERMKADNIFPNRALAAQLTQVDAFRKTAASELLD 87
>gb|EXB28627.1| hypothetical protein L484_003150 [Morus notabilis]
Length = 84
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/57 (75%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R RQ+Q L+QAY++AK PAYG R+RMKADNIFPN+A+AAQL QVDAFRKTA S+LLD
Sbjct: 28 RFRQFQALIQAYVNAKTPAYGIRERMKADNIFPNRALAAQLTQVDAFRKTAASELLD 84
>ref|XP_006482077.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Citrus sinensis]
Length = 623
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R +Q+Q L+QAYI+AK PAYG RDRM+ADN+FPNKA+AAQ+ QVDAFRKTA+S+LLD
Sbjct: 567 RFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 623
>ref|XP_006430551.1| hypothetical protein CICLE_v10011296mg [Citrus clementina]
gi|557532608|gb|ESR43791.1| hypothetical protein
CICLE_v10011296mg [Citrus clementina]
Length = 623
Score = 93.2 bits (230), Expect = 3e-17
Identities = 42/57 (73%), Positives = 52/57 (91%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R +Q+Q L+QAYI+AK PAYG RDRM+ADN+FPNKA+AAQ+ QVDAFRKTA+S+LLD
Sbjct: 567 RFKQFQTLVQAYINAKTPAYGIRDRMRADNVFPNKALAAQVAQVDAFRKTAVSELLD 623
>ref|NP_178143.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42572199|ref|NP_974190.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|145327755|ref|NP_001077853.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|75262222|sp|Q9C977.1|PP135_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g80270, mitochondrial; Flags: Precursor
gi|12324975|gb|AAG52431.1|AC018848_2 hypothetical
protein; 8785-10851 [Arabidopsis thaliana]
gi|17064898|gb|AAL32603.1| Unknown protein [Arabidopsis
thaliana] gi|20259918|gb|AAM13306.1| unknown protein
[Arabidopsis thaliana] gi|332198258|gb|AEE36379.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana] gi|332198259|gb|AEE36380.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332198260|gb|AEE36381.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 92.8 bits (229), Expect = 4e-17
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+QAYI+AK+PAYG RDR+KADNIFPNK++AAQL Q D F+KTAISD+LD
Sbjct: 540 RLRQFQALMQAYINAKSPAYGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 596
>ref|XP_002308888.2| hypothetical protein POPTR_0006s03790g [Populus trichocarpa]
gi|550335400|gb|EEE92411.2| hypothetical protein
POPTR_0006s03790g [Populus trichocarpa]
Length = 623
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R+RQ+Q L+QAYI AKAP YG R+R+KAD IFPNK++AAQL QVDAFR+TA+SDLLD
Sbjct: 567 RIRQFQTLIQAYIIAKAPCYGMRERLKADGIFPNKSLAAQLAQVDAFRRTAVSDLLD 623
>dbj|BAD95295.1| hypothetical protein [Arabidopsis thaliana]
Length = 216
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+QAYI+ K+PAYG RDR+KADNIFPNK++AAQL Q D F+KTAISD+LD
Sbjct: 160 RLRQFQALMQAYINTKSPAYGMRDRLKADNIFPNKSMAAQLAQGDPFKKTAISDILD 216
>ref|XP_007145936.1| hypothetical protein PHAVU_007G280400g [Phaseolus vulgaris]
gi|561019126|gb|ESW17930.1| hypothetical protein
PHAVU_007G280400g [Phaseolus vulgaris]
Length = 602
Score = 89.0 bits (219), Expect = 6e-16
Identities = 42/57 (73%), Positives = 51/57 (89%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RL Q+Q L+QAYI+AK PAYG R+RMKADNIFPNK+VA+QL+ V+AF+K AISDLLD
Sbjct: 546 RLSQFQTLIQAYINAKVPAYGIRERMKADNIFPNKSVASQLLLVEAFKKNAISDLLD 602
>ref|XP_006307055.1| hypothetical protein CARUB_v10008643mg [Capsella rubella]
gi|482575766|gb|EOA39953.1| hypothetical protein
CARUB_v10008643mg [Capsella rubella]
Length = 597
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R R YQ L+QAY++AKAPAYG DRMKADNIFPNK +AAQL + D F+KT +SDLLD
Sbjct: 541 RFRAYQALIQAYVNAKAPAYGMNDRMKADNIFPNKGLAAQLAKADPFKKTPLSDLLD 597
>ref|XP_006389776.1| hypothetical protein EUTSA_v10018611mg [Eutrema salsugineum]
gi|557086210|gb|ESQ27062.1| hypothetical protein
EUTSA_v10018611mg [Eutrema salsugineum]
Length = 422
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+QAYI+AK PAYG RDRMKADNIFPNK++AA L Q + F+KTA SD+LD
Sbjct: 366 RLRQFQALMQAYINAKTPAYGMRDRMKADNIFPNKSMAALLAQGNPFKKTAFSDILD 422
>ref|XP_004303594.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 625
Score = 87.0 bits (214), Expect = 2e-15
Identities = 41/57 (71%), Positives = 49/57 (85%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
RLRQ+Q L+QAYI+AKAPAYG +RMK+DN FPNKA+ QL QVD F+KTA+SDLLD
Sbjct: 569 RLRQFQSLVQAYINAKAPAYGLWERMKSDNFFPNKALLGQLSQVDPFKKTAVSDLLD 625
>ref|XP_002890106.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335948|gb|EFH66365.1| DNA binding protein
[Arabidopsis lyrata subsp. lyrata]
Length = 594
Score = 86.7 bits (213), Expect = 3e-15
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = -2
Query: 418 RLRQYQCLLQAYISAKAPAYGFRDRMKADNIFPNKAVAAQLVQVDAFRKTAISDLLD 248
R R YQ L+QAY++AKAPAYG +DRMKADNIFPNK +AAQL + D F+K +SDLLD
Sbjct: 538 RFRTYQALIQAYVNAKAPAYGMKDRMKADNIFPNKGLAAQLTKTDPFKKAPLSDLLD 594