BLASTX nr result
ID: Sinomenium22_contig00031437
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00031437
(451 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007046732.1| RNA-binding family protein isoform 2 [Theobr... 61 2e-07
ref|XP_007046731.1| RNA-binding family protein isoform 1 [Theobr... 61 2e-07
ref|XP_006383130.1| hypothetical protein POPTR_0005s11850g [Popu... 59 5e-07
ref|XP_002310851.2| hypothetical protein POPTR_0007s13940g [Popu... 59 5e-07
ref|XP_007156124.1| hypothetical protein PHAVU_003G260600g [Phas... 57 3e-06
ref|XP_003548856.1| PREDICTED: heterogeneous nuclear ribonucleop... 57 3e-06
ref|XP_003519874.1| PREDICTED: nucleolin-like [Glycine max] 57 3e-06
ref|XP_003629344.1| Heterogeneous nuclear ribonucleoprotein Q [M... 57 3e-06
gb|EXC35381.1| Heterogeneous nuclear ribonucleoprotein Q [Morus ... 56 4e-06
gb|EXB75579.1| Heterogeneous nuclear ribonucleoprotein Q [Morus ... 56 4e-06
ref|XP_002531520.1| RNA binding protein, putative [Ricinus commu... 56 6e-06
>ref|XP_007046732.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508698993|gb|EOX90889.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 805
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
K+ + K + KKE+E+F GGL RDAVEEDL +VF+K+GEVVEVR
Sbjct: 294 KELTAIAKERKIKKEHEIFVGGLDRDAVEEDLRQVFEKIGEVVEVR 339
>ref|XP_007046731.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508698992|gb|EOX90888.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 803
Score = 60.8 bits (146), Expect = 2e-07
Identities = 28/46 (60%), Positives = 36/46 (78%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
K+ + K + KKE+E+F GGL RDAVEEDL +VF+K+GEVVEVR
Sbjct: 294 KELTAIAKERKIKKEHEIFVGGLDRDAVEEDLRQVFEKIGEVVEVR 339
>ref|XP_006383130.1| hypothetical protein POPTR_0005s11850g [Populus trichocarpa]
gi|550338709|gb|ERP60927.1| hypothetical protein
POPTR_0005s11850g [Populus trichocarpa]
Length = 817
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
++ + K + KKEYE+F GGL RDA EEDL +VF+K+GEVVEVR
Sbjct: 302 RELTAVAKERKIKKEYEIFVGGLDRDATEEDLRKVFEKIGEVVEVR 347
>ref|XP_002310851.2| hypothetical protein POPTR_0007s13940g [Populus trichocarpa]
gi|550334840|gb|EEE91301.2| hypothetical protein
POPTR_0007s13940g [Populus trichocarpa]
Length = 743
Score = 59.3 bits (142), Expect = 5e-07
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
++ + K + KKEYE+F GGL RDA EEDL +VF+K+GEVVEVR
Sbjct: 228 RELTAVAKERKIKKEYEIFVGGLDRDATEEDLRKVFEKIGEVVEVR 273
>ref|XP_007156124.1| hypothetical protein PHAVU_003G260600g [Phaseolus vulgaris]
gi|561029478|gb|ESW28118.1| hypothetical protein
PHAVU_003G260600g [Phaseolus vulgaris]
Length = 929
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
++ + + ++ KKE+E+F GGL RDA EEDL +VFQ++GE+VEVR
Sbjct: 419 RELEAIANQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEIVEVR 464
>ref|XP_003548856.1| PREDICTED: heterogeneous nuclear ribonucleoprotein R [Glycine max]
Length = 953
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
++ + + ++ KKE+E+F GGL RDA EEDL +VFQ++GE+VEVR
Sbjct: 443 RELEAIANQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEIVEVR 488
>ref|XP_003519874.1| PREDICTED: nucleolin-like [Glycine max]
Length = 884
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/46 (52%), Positives = 36/46 (78%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
++ + + ++ KKE+E+F GGL RDA EEDL +VFQ++GE+VEVR
Sbjct: 374 RELEAIANQRKIKKEHEIFVGGLDRDATEEDLRKVFQRIGEIVEVR 419
>ref|XP_003629344.1| Heterogeneous nuclear ribonucleoprotein Q [Medicago truncatula]
gi|355523366|gb|AET03820.1| Heterogeneous nuclear
ribonucleoprotein Q [Medicago truncatula]
Length = 989
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/45 (51%), Positives = 36/45 (80%)
Frame = -3
Query: 137 KFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
+F+ + K++ +KE+E+F GGL RD EEDL ++FQ++GEV+EVR
Sbjct: 404 EFEAIAKQRRIRKEHEIFVGGLDRDTTEEDLKKIFQRIGEVLEVR 448
>gb|EXC35381.1| Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis]
Length = 849
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
++ ++K + ++KE EVF GGL RDAVEED+ +VF+K+GE+VE+R
Sbjct: 290 RELTAIVKERKNRKEREVFVGGLDRDAVEEDVRKVFEKMGEIVEIR 335
>gb|EXB75579.1| Heterogeneous nuclear ribonucleoprotein Q [Morus notabilis]
Length = 559
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
++ ++K + ++KE EVF GGL RDAVEED+ +VF+K+GE+VE+R
Sbjct: 290 RELTAIVKERKNRKEREVFVGGLDRDAVEEDVRKVFEKMGEIVEIR 335
>ref|XP_002531520.1| RNA binding protein, putative [Ricinus communis]
gi|223528873|gb|EEF30874.1| RNA binding protein,
putative [Ricinus communis]
Length = 841
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/46 (54%), Positives = 34/46 (73%)
Frame = -3
Query: 140 KKFQTLLKRKGSKKEYEVFGGGLHRDAVEEDLNEVFQKVGEVVEVR 3
K+ ++K + KKEYE+F GGL R+A EED+ VF+ +GEVVEVR
Sbjct: 328 KELTAVVKERKIKKEYEIFVGGLDREATEEDVRRVFETIGEVVEVR 373