BLASTX nr result
ID: Sinomenium22_contig00031133
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00031133
(280 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314... 110 2e-22
ref|XP_003626942.1| Ribosomal protein S8 [Medicago truncatula] g... 110 2e-22
ref|NP_001105391.1| 40S ribosomal protein S8 [Zea mays] gi|62267... 108 8e-22
dbj|BAA07207.1| ribosomal protein S8 [Oryza sativa Japonica Group] 108 8e-22
ref|XP_004975334.1| PREDICTED: 40S ribosomal protein S8-like [Se... 108 8e-22
ref|XP_004953910.1| PREDICTED: 40S ribosomal protein S8-like [Se... 108 8e-22
gb|EMT18438.1| 40S ribosomal protein S8 [Aegilops tauschii] 108 8e-22
ref|NP_001046866.1| Os02g0489400 [Oryza sativa Japonica Group] g... 108 8e-22
emb|CAA03954.1| ribosomal protein S8 [Hordeum vulgare subsp. vul... 108 8e-22
gb|AFW66137.1| putative ribosomal protein S8e family protein [Ze... 108 8e-22
gb|AFW66128.1| putative ribosomal protein S8e family protein [Ze... 108 8e-22
gb|AFK40150.1| unknown [Lotus japonicus] 108 8e-22
ref|XP_003574981.1| PREDICTED: 40S ribosomal protein S8-like [Br... 108 8e-22
ref|XP_003557224.1| PREDICTED: 40S ribosomal protein S8-like [Br... 108 8e-22
dbj|BAJ89904.1| predicted protein [Hordeum vulgare subsp. vulgare] 108 8e-22
ref|XP_002446216.1| hypothetical protein SORBIDRAFT_06g004770 [S... 108 8e-22
ref|XP_002452585.1| hypothetical protein SORBIDRAFT_04g028530 [S... 108 8e-22
ref|NP_001132384.1| uncharacterized protein LOC100193830 [Zea ma... 108 8e-22
gb|EAY93669.1| hypothetical protein OsI_15456 [Oryza sativa Indi... 108 8e-22
gb|ABL85034.1| ribosomal subunit 8E protein [Brachypodium sylvat... 108 8e-22
>ref|XP_004295858.1| PREDICTED: uncharacterized protein LOC101314838 [Fragaria vesca
subsp. vesca]
Length = 1524
Score = 110 bits (275), Expect = 2e-22
Identities = 55/67 (82%), Positives = 56/67 (83%)
Frame = -1
Query: 202 AKMGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRA 23
AKMGISRDSMHKRRATGGK+K WRKKRKYELGRQPANTKLSSNKT VKWRA
Sbjct: 1301 AKMGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRA 1360
Query: 22 LRLDTGN 2
LRLDTGN
Sbjct: 1361 LRLDTGN 1367
Score = 107 bits (266), Expect = 2e-21
Identities = 53/65 (81%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGK+K WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|XP_003626942.1| Ribosomal protein S8 [Medicago truncatula]
gi|355520964|gb|AET01418.1| Ribosomal protein S8
[Medicago truncatula]
Length = 605
Score = 110 bits (275), Expect = 2e-22
Identities = 60/95 (63%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = -1
Query: 280 GKQKPCGGERESVLGLGFRVSALRFVA--KMGISRDSMHKRRATGGKQKPWRKKRKYELG 107
GK + C R L +G S + + KMGISRDSMHKRR TGGK+K WRKKRKYELG
Sbjct: 361 GKLQCCKNHRRRKLDVGKSASCIVSSSFFKMGISRDSMHKRRETGGKKKAWRKKRKYELG 420
Query: 106 RQPANTKLSSNKTXXXXXXXXXXVKWRALRLDTGN 2
RQPANTKLSSNKT VKWRALRLDTGN
Sbjct: 421 RQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGN 455
Score = 68.6 bits (166), Expect = 9e-10
Identities = 50/119 (42%), Positives = 55/119 (46%), Gaps = 30/119 (25%)
Frame = -1
Query: 268 PCGGERESVLGLGFRVSALRFVAKMGISRDSMHKRRATGGKQKPWRKKRK---------- 119
PC + G G + S+ A ISRDS KR ATGGK+K KKRK
Sbjct: 52 PCACPKNVAAGTGCKCSS----ACACISRDSRDKRLATGGKRKTCIKKRKFLVRLLFYNF 107
Query: 118 --------------------YELGRQPANTKLSSNKTXXXXXXXXXXVKWRALRLDTGN 2
YELGRQPANTKLSSNKT +K RALRLDTGN
Sbjct: 108 VTLLWNLRFLMNMELGLAYRYELGRQPANTKLSSNKTVRSIRVRGGNLKCRALRLDTGN 166
>ref|NP_001105391.1| 40S ribosomal protein S8 [Zea mays]
gi|6226702|sp|Q08069.2|RS8_MAIZE RecName: Full=40S
ribosomal protein S8 gi|1498053|gb|AAB06330.1| ribosomal
protein S8 [Zea mays] gi|194692698|gb|ACF80433.1|
unknown [Zea mays] gi|195605614|gb|ACG24637.1| 40S
ribosomal protein S8 [Zea mays]
gi|413926193|gb|AFW66125.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926197|gb|AFW66129.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926198|gb|AFW66130.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926206|gb|AFW66138.1| putative ribosomal protein
S8e family protein [Zea mays]
gi|413926210|gb|AFW66142.1| putative ribosomal protein
S8e family protein [Zea mays]
Length = 221
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>dbj|BAA07207.1| ribosomal protein S8 [Oryza sativa Japonica Group]
Length = 220
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|XP_004975334.1| PREDICTED: 40S ribosomal protein S8-like [Setaria italica]
Length = 221
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|XP_004953910.1| PREDICTED: 40S ribosomal protein S8-like [Setaria italica]
Length = 221
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>gb|EMT18438.1| 40S ribosomal protein S8 [Aegilops tauschii]
Length = 225
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|NP_001046866.1| Os02g0489400 [Oryza sativa Japonica Group]
gi|109940162|sp|P49199.2|RS8_ORYSJ RecName: Full=40S
ribosomal protein S8 gi|582044859|pdb|3J60|I Chain I,
Localization Of The Small Subunit Ribosomal Proteins
Into A 5.5 A Cryo-em Map Of Triticum Aestivum
Translating 80s Ribosome gi|47848087|dbj|BAD21871.1|
putative 40S ribosomal protein S8 [Oryza sativa Japonica
Group] gi|47848093|dbj|BAD21876.1| putative 40S
ribosomal protein S8 [Oryza sativa Japonica Group]
gi|113536397|dbj|BAF08780.1| Os02g0489400 [Oryza sativa
Japonica Group] gi|215734981|dbj|BAG95703.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218190769|gb|EEC73196.1| hypothetical protein
OsI_07259 [Oryza sativa Indica Group]
gi|222622880|gb|EEE57012.1| hypothetical protein
OsJ_06781 [Oryza sativa Japonica Group]
Length = 220
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>emb|CAA03954.1| ribosomal protein S8 [Hordeum vulgare subsp. vulgare]
Length = 126
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>gb|AFW66137.1| putative ribosomal protein S8e family protein [Zea mays]
Length = 128
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>gb|AFW66128.1| putative ribosomal protein S8e family protein [Zea mays]
gi|413926209|gb|AFW66141.1| putative ribosomal protein
S8e family protein [Zea mays]
Length = 153
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>gb|AFK40150.1| unknown [Lotus japonicus]
Length = 217
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKTWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|XP_003574981.1| PREDICTED: 40S ribosomal protein S8-like [Brachypodium distachyon]
Length = 229
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|XP_003557224.1| PREDICTED: 40S ribosomal protein S8-like [Brachypodium distachyon]
Length = 226
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>dbj|BAJ89904.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 225
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|XP_002446216.1| hypothetical protein SORBIDRAFT_06g004770 [Sorghum bicolor]
gi|241937399|gb|EES10544.1| hypothetical protein
SORBIDRAFT_06g004770 [Sorghum bicolor]
Length = 220
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|XP_002452585.1| hypothetical protein SORBIDRAFT_04g028530 [Sorghum bicolor]
gi|241932416|gb|EES05561.1| hypothetical protein
SORBIDRAFT_04g028530 [Sorghum bicolor]
Length = 221
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>ref|NP_001132384.1| uncharacterized protein LOC100193830 [Zea mays]
gi|194694240|gb|ACF81204.1| unknown [Zea mays]
Length = 221
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>gb|EAY93669.1| hypothetical protein OsI_15456 [Oryza sativa Indica Group]
Length = 221
Score = 108 bits (270), Expect = 8e-22
Identities = 53/65 (81%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT +KWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNLKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65
>gb|ABL85034.1| ribosomal subunit 8E protein [Brachypodium sylvaticum]
Length = 223
Score = 108 bits (270), Expect = 8e-22
Identities = 54/65 (83%), Positives = 54/65 (83%)
Frame = -1
Query: 196 MGISRDSMHKRRATGGKQKPWRKKRKYELGRQPANTKLSSNKTXXXXXXXXXXVKWRALR 17
MGISRDSMHKRRATGGKQK WRKKRKYELGRQPANTKLSSNKT VKWRALR
Sbjct: 1 MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60
Query: 16 LDTGN 2
LDTGN
Sbjct: 61 LDTGN 65