BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00031131
         (1005 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27412.3| unnamed protein product [Vitis vinifera]              642   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   642   0.0  
ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   630   e-178
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   630   e-178
ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theob...   629   e-178
ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theob...   629   e-178
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   629   e-178
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   629   e-178
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   628   e-177
dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa...   627   e-177
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...   627   e-177
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...   627   e-177
gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indi...   627   e-177
ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   625   e-177
ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   623   e-176
tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]         623   e-176
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/...   622   e-176
emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]   620   e-175
dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymer...   620   e-175
sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymeras...   620   e-175

>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  642 bits (1657), Expect = 0.0
 Identities = 312/334 (93%), Positives = 324/334 (97%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDE+GFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 359  RHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 418

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+AN+YAGGVDKLSY+GRV+FTENHL+DIFDSADRPLEGRRWWL AE
Sbjct: 419  RPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAE 478

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 479  DPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 538

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVYSGIAARVL+IM+RDA+KDPATEPNALRARLLI+QVDRKLVKQTVMTSVYGVTY
Sbjct: 539  EKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTY 598

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER  IADE E+F ASCYAAK TLTALGEMFEAARSIMSWLGDCAKVIA
Sbjct: 599  IGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIA 658

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
            SEN PVRW TPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 659  SENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQV 692


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  642 bits (1657), Expect = 0.0
 Identities = 312/334 (93%), Positives = 324/334 (97%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDE+GFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 527  RHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 586

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+AN+YAGGVDKLSY+GRV+FTENHL+DIFDSADRPLEGRRWWL AE
Sbjct: 587  RPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAE 646

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 647  DPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 706

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVYSGIAARVL+IM+RDA+KDPATEPNALRARLLI+QVDRKLVKQTVMTSVYGVTY
Sbjct: 707  EKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTY 766

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER  IADE E+F ASCYAAK TLTALGEMFEAARSIMSWLGDCAKVIA
Sbjct: 767  IGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIA 826

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
            SEN PVRW TPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 827  SENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQV 860


>ref|XP_006348633.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            tuberosum]
          Length = 993

 Score =  630 bits (1626), Expect = e-178
 Identities = 298/334 (89%), Positives = 321/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+EG
Sbjct: 542  RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEG 601

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+AN+Y GGVDKLSY+GR +F+ENH++DIFDSADRPLEGRRWWLGAE
Sbjct: 602  RPLGKSGLRWLKIHLANVYGGGVDKLSYEGRAAFSENHVEDIFDSADRPLEGRRWWLGAE 661

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CIN+SEALRS SPET+ISHMP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 662  DPFQCLATCINISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 721

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            +KPADVYSGIAARVL+IM+RDA+KDPAT+PN +RARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 722  DKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTY 781

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER  I D+ ELF A+CYAAK TLTALGEMFEAARSIMSWLGDCAK+IA
Sbjct: 782  IGARDQIKRRLKERGAIEDDNELFSAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA 841

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             ENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+
Sbjct: 842  MENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 875


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
            protein product [Vitis vinifera]
          Length = 1035

 Score =  630 bits (1624), Expect = e-178
 Identities = 302/334 (90%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDE+GFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 584  RHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 643

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLG SGL WLKIH+ANL+AGGVDKLS++GR++FTENHLDDIFDSADRPLEG+RWWL AE
Sbjct: 644  RPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFDSADRPLEGKRWWLNAE 703

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQ LA CINLSEALRSSSPETTISH+PVHQDGSCNGLQHYAALGRD+LGA AVNLVAG
Sbjct: 704  DPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDQLGATAVNLVAG 763

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVYSGIAARVL+IM+RDAEKDPA  P+ALRAR+LINQVDRKLVKQTVMTSVYGVTY
Sbjct: 764  EKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARILINQVDRKLVKQTVMTSVYGVTY 823

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER+ IAD+ ELFGA+CYAAK+TLTALGEMF+AARSIMSWLGDCAK+IA
Sbjct: 824  IGARDQIKRRLKERNAIADDVELFGAACYAAKITLTALGEMFQAARSIMSWLGDCAKIIA 883

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
            SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 884  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 917


>ref|XP_007045723.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
            gi|508709658|gb|EOY01555.1| DNA-directed RNA polymerase
            isoform 3 [Theobroma cacao]
          Length = 932

 Score =  629 bits (1622), Expect = e-178
 Identities = 302/334 (90%), Positives = 322/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHS RCDVELKL VARKM+DE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 545  RHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 604

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSY+GR++FTENHLDDIFDSADRPLEGRRWWL AE
Sbjct: 605  RPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAE 664

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAA+VNLVAG
Sbjct: 665  DPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAG 724

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVYSGIAARV++IMRRDAEKDPA  P+AL ARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 725  EKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLINQVDRKLVKQTVMTSVYGVTY 784

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER  IAD+TE+F ASCYAA+ TLTALGEMF+AARSIM+WLG+CAKVI+
Sbjct: 785  IGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMFQAARSIMNWLGECAKVIS 844

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
            SENQPVRW TPLGLPVVQPYR+LGRHLIKTSLQV
Sbjct: 845  SENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQV 878


>ref|XP_007045721.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|590698457|ref|XP_007045722.1| DNA-directed RNA
            polymerase isoform 1 [Theobroma cacao]
            gi|508709656|gb|EOY01553.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao] gi|508709657|gb|EOY01554.1|
            DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
          Length = 996

 Score =  629 bits (1622), Expect = e-178
 Identities = 302/334 (90%), Positives = 322/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHS RCDVELKL VARKM+DE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 545  RHSLRCDVELKLAVARKMRDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 604

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSY+GR++FTENHLDDIFDSADRPLEGRRWWL AE
Sbjct: 605  RPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENHLDDIFDSADRPLEGRRWWLSAE 664

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAA+VNLVAG
Sbjct: 665  DPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAASVNLVAG 724

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVYSGIAARV++IMRRDAEKDPA  P+AL ARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 725  EKPADVYSGIAARVVDIMRRDAEKDPAINPHALHARLLINQVDRKLVKQTVMTSVYGVTY 784

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER  IAD+TE+F ASCYAA+ TLTALGEMF+AARSIM+WLG+CAKVI+
Sbjct: 785  IGARDQIKRRLKERCAIADDTEMFVASCYAARTTLTALGEMFQAARSIMNWLGECAKVIS 844

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
            SENQPVRW TPLGLPVVQPYR+LGRHLIKTSLQV
Sbjct: 845  SENQPVRWVTPLGLPVVQPYRQLGRHLIKTSLQV 878


>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X2 [Oryza brachyantha]
          Length = 839

 Score =  629 bits (1621), Expect = e-178
 Identities = 298/334 (89%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 388  RHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 447

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR++FTENHL+DIFDSADRPLEG+RWWLGAE
Sbjct: 448  RPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 507

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVCINL+EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 508  DPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 567

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RVLEIMR DA KDPAT+P+A RAR+L++QVDRKLVKQTVMTSVYGVTY
Sbjct: 568  EKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTY 627

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GAR+QIKRRLKERD+I D++ELF ASCYAAKVTLTALGEMF+AARSIM+WLGDCAK+IA
Sbjct: 628  VGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIA 687

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PV+WTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 688  CENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQV 721


>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like isoform
            X1 [Oryza brachyantha]
          Length = 703

 Score =  629 bits (1621), Expect = e-178
 Identities = 298/334 (89%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 361  RHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 420

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR++FTENHL+DIFDSADRPLEG+RWWLGAE
Sbjct: 421  RPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 480

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVCINL+EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 481  DPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 540

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RVLEIMR DA KDPAT+P+A RAR+L++QVDRKLVKQTVMTSVYGVTY
Sbjct: 541  EKPADVYTGIATRVLEIMRNDALKDPATDPDAARARMLVDQVDRKLVKQTVMTSVYGVTY 600

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GAR+QIKRRLKERD+I D++ELF ASCYAAKVTLTALGEMF+AARSIM+WLGDCAK+IA
Sbjct: 601  VGAREQIKRRLKERDMIGDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKIIA 660

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PV+WTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 661  CENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQV 694


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  628 bits (1620), Expect = e-177
 Identities = 300/334 (89%), Positives = 321/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 525  RHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 584

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGL WLKIH+ANLYAGGVDKLSYDGRV+FTENHL++IFDSADRPLEG+RWWLGAE
Sbjct: 585  RPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAE 644

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVC+NL+EALRSSSPETTISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 645  DPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 704

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RVLEIMR DA+KDP+ +P+  RARL+++QVDRKLVKQTVMTSVYGVTY
Sbjct: 705  EKPADVYTGIATRVLEIMRMDAQKDPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTY 764

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GARDQIKRRLKER VI DE ELFGASCYAAKVTLTALGEMF+AAR IM+WLGDCAKVIA
Sbjct: 765  VGARDQIKRRLKERGVIPDEAELFGASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIA 824

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 825  CENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 858


>dbj|BAD23376.1| putative phage-type RNA polymerase [Oryza sativa Japonica Group]
            gi|48716846|dbj|BAD23544.1| putative phage-type RNA
            polymerase [Oryza sativa Japonica Group]
            gi|215694941|dbj|BAG90132.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 951

 Score =  627 bits (1617), Expect = e-177
 Identities = 298/334 (89%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 566  RHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 625

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR++FTENHL+DIFDSADRPLEG+RWWLGAE
Sbjct: 626  RPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 685

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVCINL+EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 686  DPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 745

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RV+EIM+ DA KDPAT+P+A RARLL++QVDRKLVKQTVMTSVYGVTY
Sbjct: 746  EKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTY 805

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GAR+QIKRRLKERD+I D++ELF ASCYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA
Sbjct: 806  VGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIA 865

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 866  CENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 899


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase [Oryza sativa Japonica
            Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
            sativa Japonica Group]
          Length = 1017

 Score =  627 bits (1617), Expect = e-177
 Identities = 298/334 (89%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 566  RHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 625

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR++FTENHL+DIFDSADRPLEG+RWWLGAE
Sbjct: 626  RPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 685

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVCINL+EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 686  DPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 745

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RV+EIM+ DA KDPAT+P+A RARLL++QVDRKLVKQTVMTSVYGVTY
Sbjct: 746  EKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTY 805

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GAR+QIKRRLKERD+I D++ELF ASCYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA
Sbjct: 806  VGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIA 865

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 866  CENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 899


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score =  627 bits (1617), Expect = e-177
 Identities = 298/334 (89%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 532  RHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 591

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR++FTENHL+DIFDSADRPLEG+RWWLGAE
Sbjct: 592  RPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 651

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVCINL+EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 652  DPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 711

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RV+EIM+ DA KDPAT+P+A RARLL++QVDRKLVKQTVMTSVYGVTY
Sbjct: 712  EKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTY 771

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GAR+QIKRRLKERD+I D++ELF ASCYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA
Sbjct: 772  VGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIA 831

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 832  CENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 865


>gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indica Group]
          Length = 845

 Score =  627 bits (1617), Expect = e-177
 Identities = 298/334 (89%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 394  RHSQRCDVELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 453

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYAGGVDKLSYDGR++FTENHL+DIFDSADRPLEG+RWWLGAE
Sbjct: 454  RPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAE 513

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVCINL+EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 514  DPFQCLAVCINLTEALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 573

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RV+EIM+ DA KDPAT+P+A RARLL++QVDRKLVKQTVMTSVYGVTY
Sbjct: 574  EKPADVYTGIATRVVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTY 633

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GAR+QIKRRLKERD+I D++ELF ASCYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA
Sbjct: 634  VGAREQIKRRLKERDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIA 693

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 694  CENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 727


>ref|XP_004239009.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Solanum
            lycopersicum]
          Length = 993

 Score =  625 bits (1612), Expect = e-177
 Identities = 296/334 (88%), Positives = 320/334 (95%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEF+EG
Sbjct: 542  RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFSEG 601

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+AN+Y GGVDKLS +GR +F+ENH++DIFDSADRPLEGRRWWLGAE
Sbjct: 602  RPLGKSGLRWLKIHLANVYGGGVDKLSCEGRAAFSENHVEDIFDSADRPLEGRRWWLGAE 661

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CI++SEALRS SPET+ISHMP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 662  DPFQCLATCISISEALRSPSPETSISHMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 721

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            +KPADVYSGIAARVL+IM+RDA+KDPAT+PN +RARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 722  DKPADVYSGIAARVLDIMKRDADKDPATDPNVMRARLLINQVDRKLVKQTVMTSVYGVTY 781

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER  I D+ ELF A+CYAAK TLTALGEMFEAARSIMSWLGDCAK+IA
Sbjct: 782  IGARDQIKRRLKERGAIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA 841

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             ENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+
Sbjct: 842  MENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 875


>ref|XP_004956403.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Setaria italica]
          Length = 1005

 Score =  623 bits (1607), Expect = e-176
 Identities = 295/334 (88%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 554  RHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 613

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLG+SGLRWLKIH+ANLYAGGVDKLSY GR++F ENHL++IFDSADRPLEG+RWWLGAE
Sbjct: 614  RPLGESGLRWLKIHLANLYAGGVDKLSYAGRIAFAENHLEEIFDSADRPLEGKRWWLGAE 673

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVC+NL+EALRS SPE TISH+PVHQDGSCNGLQHYAALGRDKLGA AVNLVAG
Sbjct: 674  DPFQCLAVCMNLTEALRSPSPEATISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAG 733

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVYSGIA RV+EIMRRD++KDP+T+P+A RARL+++QVDRKLVKQTVMTSVYGVTY
Sbjct: 734  EKPADVYSGIATRVVEIMRRDSQKDPSTDPDAARARLILDQVDRKLVKQTVMTSVYGVTY 793

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            +GAR+QIKRRLKER VIAD+ ELFGASCYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA
Sbjct: 794  VGAREQIKRRLKERGVIADDAELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIA 853

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PV+WTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 854  CENEPVKWTTPLGLPVVQPYRKLGRHLIKTSLQV 887


>tpg|DAA63638.1| TPA: RNA polymerase T phage-like 1 [Zea mays]
          Length = 975

 Score =  623 bits (1607), Expect = e-176
 Identities = 296/334 (88%), Positives = 323/334 (96%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCDVELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEG
Sbjct: 524  RHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEG 583

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANLYA GVDKLSYDGR++F ENHL++IFDSADRPLEGRRWWLGAE
Sbjct: 584  RPLGKSGLRWLKIHLANLYAAGVDKLSYDGRIAFAENHLEEIFDSADRPLEGRRWWLGAE 643

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVC+NL+EALRSSSPETTISH+PVHQDGSCNGLQHYAALG+DKLGA AVNLVAG
Sbjct: 644  DPFQCLAVCMNLTEALRSSSPETTISHIPVHQDGSCNGLQHYAALGKDKLGAIAVNLVAG 703

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVY+GIA RV+EIMR DA+KDP+ EP+A RARL+++QVDRKLVKQTVMTSVYGVTY
Sbjct: 704  EKPADVYTGIANRVMEIMRMDAQKDPSVEPDAARARLIVDQVDRKLVKQTVMTSVYGVTY 763

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGAR+QI+RRLKER VI +++ELFGASCYAAKVTLTALGEMF+AARSIM+WLGDCAKVIA
Sbjct: 764  IGAREQIRRRLKERGVIPNDSELFGASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIA 823

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN+PVRWTTPLGLPVVQPYRKLGRHLIKTSLQV
Sbjct: 824  CENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 857


>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223526524|gb|EEF28786.1|
            DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 589

 Score =  622 bits (1605), Expect = e-176
 Identities = 298/334 (89%), Positives = 320/334 (95%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD ELKL VARKMKDEEGF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 138  RHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 197

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+ANL+AGGVDKLSYDGR++FTENHLDDIFDSADRPLEG+RWWL AE
Sbjct: 198  RPLGKSGLRWLKIHLANLFAGGVDKLSYDGRIAFTENHLDDIFDSADRPLEGKRWWLNAE 257

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLAVCI+L+EALRSSSPET ISH+P+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 258  DPFQCLAVCIDLTEALRSSSPETFISHVPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 317

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            EKPADVYSGIA RVL+IMR+DA+KDP   P+AL A++LI+QVDRKLVKQTVMTSVYGVTY
Sbjct: 318  EKPADVYSGIAVRVLDIMRKDAQKDPKVFPDALHAKILISQVDRKLVKQTVMTSVYGVTY 377

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER  IAD+TE+F ASCYAAKVTLTALGEMFEAARSIMSWLG+CAK+IA
Sbjct: 378  IGARDQIKRRLKERGFIADDTEIFVASCYAAKVTLTALGEMFEAARSIMSWLGECAKIIA 437

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
            SEN+PVRWTTPLGLPVVQPYR  GRHLIKTSLQV
Sbjct: 438  SENEPVRWTTPLGLPVVQPYRNFGRHLIKTSLQV 471


>emb|CAC95019.1| mitochondrial RNA polymerase [Nicotiana sylvestris]
          Length = 1002

 Score =  620 bits (1598), Expect = e-175
 Identities = 293/334 (87%), Positives = 318/334 (95%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 551  RHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 610

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+AN+Y GGVDKLSY+GRV+F+ENH++DIFDSA+RPLEG+RWWLGAE
Sbjct: 611  RPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAE 670

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALGRD LGAAAVNLVAG
Sbjct: 671  DPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAG 730

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            +KPADVYSGIAARVL+IM+RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 731  DKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTY 790

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER VI D+ ELF A+CYAAK TLTALGEMFEAARSIMSWLGDCAK+IA
Sbjct: 791  IGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA 850

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+
Sbjct: 851  MENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 884


>dbj|BAB69063.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris]
          Length = 1002

 Score =  620 bits (1598), Expect = e-175
 Identities = 293/334 (87%), Positives = 318/334 (95%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 551  RHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 610

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLGKSGLRWLKIH+AN+Y GGVDKLSY+GRV+F+ENH++DIFDSA+RPLEG+RWWLGAE
Sbjct: 611  RPLGKSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHVEDIFDSAERPLEGKRWWLGAE 670

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALGRD LGAAAVNLVAG
Sbjct: 671  DPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDTLGAAAVNLVAG 730

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            +KPADVYSGIAARVL+IM+RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 731  DKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTY 790

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIKRRLKER VI D+ ELF A+CYAAK TLTALGEMFEAARSIMSWLGDCAK+IA
Sbjct: 791  IGARDQIKRRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA 850

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+
Sbjct: 851  MENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 884


>sp|Q8L6J5.2|RPO1B_TOBAC RecName: Full=DNA-directed RNA polymerase 1B, mitochondrial; AltName:
            Full=NictaRpoT1-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 1B; Flags: Precursor
          Length = 1002

 Score =  620 bits (1598), Expect = e-175
 Identities = 293/334 (87%), Positives = 318/334 (95%)
 Frame = -3

Query: 1003 RHSQRCDVELKLVVARKMKDEEGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 824
            RHSQRCD+ELKL VARKMKDE+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG
Sbjct: 551  RHSQRCDIELKLAVARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEG 610

Query: 823  RPLGKSGLRWLKIHIANLYAGGVDKLSYDGRVSFTENHLDDIFDSADRPLEGRRWWLGAE 644
            RPLG SGLRWLKIH+AN+Y GGVDKLSY+GRV+F+ENHL+DIFDSA+RPLEG+RWWLGAE
Sbjct: 611  RPLGTSGLRWLKIHLANVYGGGVDKLSYEGRVAFSENHLEDIFDSAERPLEGKRWWLGAE 670

Query: 643  DPFQCLAVCINLSEALRSSSPETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 464
            DPFQCLA CIN++EALRS SPET IS+MP+HQDGSCNGLQHYAALGRDKLGAAAVNLVAG
Sbjct: 671  DPFQCLATCINIAEALRSPSPETAISYMPIHQDGSCNGLQHYAALGRDKLGAAAVNLVAG 730

Query: 463  EKPADVYSGIAARVLEIMRRDAEKDPATEPNALRARLLINQVDRKLVKQTVMTSVYGVTY 284
            +KPADVYSGIAARVL+IM+RDA KDPA +PN +RARLLINQVDRKLVKQTVMTSVYGVTY
Sbjct: 731  DKPADVYSGIAARVLDIMKRDAAKDPANDPNVMRARLLINQVDRKLVKQTVMTSVYGVTY 790

Query: 283  IGARDQIKRRLKERDVIADETELFGASCYAAKVTLTALGEMFEAARSIMSWLGDCAKVIA 104
            IGARDQIK+RLKER VI D+ ELF A+CYAAK TLTALGEMFEAARSIMSWLGDCAK+IA
Sbjct: 791  IGARDQIKKRLKERGVIEDDNELFAAACYAAKTTLTALGEMFEAARSIMSWLGDCAKIIA 850

Query: 103  SENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQV 2
             EN PVRWTTPLGLPVVQPYRKLGRHLIKTSLQ+
Sbjct: 851  MENHPVRWTTPLGLPVVQPYRKLGRHLIKTSLQI 884