BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00031050
         (1492 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFU95578.1| RpoB, partial (chloroplast) [Anthodiscus peruanus]      70   2e-09
ref|YP_009026432.1| RNA polymerase beta subunit (chloroplast) [D...    69   5e-09
ref|YP_008081878.1| DNA-directed RNA polymerase beta chain (chlo...    69   5e-09
ref|YP_008081800.1| DNA-directed RNA polymerase beta chain (chlo...    69   5e-09
gb|AGK25552.1| DNA-directed RNA polymerase beta chain (chloropla...    69   5e-09
ref|YP_008081644.1| DNA-directed RNA polymerase beta chain (chlo...    69   5e-09
ref|YP_008081566.1| DNA-directed RNA polymerase beta chain (chlo...    69   5e-09
gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite...    69   5e-09
gb|AFU95613.1| RpoB, partial (chloroplast) [Podocalyx loranthoides]    69   5e-09
ref|YP_006503684.1| RNA polymerase beta subunit (chloroplast) [E...    69   5e-09
ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [P...    69   5e-09
gb|AFB18355.1| RNA polymerase beta subunit [Syngonanthus chrysan...    69   5e-09
gb|AFB18340.1| RNA polymerase beta subunit [Juncus effusus]            69   5e-09
gb|AEX94323.1| RNA polymerase beta subunit (chloroplast) [Agapan...    69   5e-09
ref|YP_003587460.1| RNA polymerase beta subunit [Oncidium hybrid...    69   5e-09
ref|YP_358570.2| RNA polymerase beta subunit [Phalaenopsis aphro...    69   5e-09
ref|YP_008993965.1| RNA polymerase beta subunit (chloroplast) [P...    68   9e-09
ref|YP_008592631.1| RNA polymerase beta subunit (chloroplast) [B...    68   9e-09
ref|YP_008081357.1| RNA polymerase beta subunit (chloroplast) [T...    68   9e-09
gb|AGC38236.1| RNA polymerase beta subunit (chloroplast) [Crypto...    68   9e-09

>gb|AFU95578.1| RpoB, partial (chloroplast) [Anthodiscus peruanus]
          Length = 1108

 Score = 70.1 bits (170), Expect = 2e-09
 Identities = 32/39 (82%), Positives = 34/39 (87%)
 Frame = +3

Query: 798  ATYEIEHNLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGK 914
            A+ +   NLWVFEPEYPGKSRIFDGRTGD FEQPVIIGK
Sbjct: 943  ASKQTAXNLWVFEPEYPGKSRIFDGRTGDPFEQPVIIGK 981


>ref|YP_009026432.1| RNA polymerase beta subunit (chloroplast) [Dendrobium officinale]
            gi|507474317|gb|AGM48193.1| RNA polymerase beta subunit
            (chloroplast) [Dendrobium officinale]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_008081878.1| DNA-directed RNA polymerase beta chain (chloroplast) [Cymbidium
            mannii] gi|482662564|gb|AGK25786.1| DNA-directed RNA
            polymerase beta chain (chloroplast) [Cymbidium mannii]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_008081800.1| DNA-directed RNA polymerase beta chain (chloroplast) [Cymbidium
            tracyanum] gi|482662406|gb|AGK25630.1| DNA-directed RNA
            polymerase beta chain (chloroplast) [Cymbidium tracyanum]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>gb|AGK25552.1| DNA-directed RNA polymerase beta chain (chloroplast) [Cymbidium
            mannii]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_008081644.1| DNA-directed RNA polymerase beta chain (chloroplast) [Cymbidium
            sinense] gi|512721401|ref|YP_008081722.1| DNA-directed
            RNA polymerase beta chain (chloroplast) [Cymbidium
            tortisepalum] gi|482662090|gb|AGK25318.1| DNA-directed
            RNA polymerase beta chain (chloroplast) [Cymbidium
            sinense] gi|482662169|gb|AGK25396.1| DNA-directed RNA
            polymerase beta chain (chloroplast) [Cymbidium
            tortisepalum] gi|482662248|gb|AGK25474.1| DNA-directed
            RNA polymerase beta chain (chloroplast) [Cymbidium
            tortisepalum] gi|482662485|gb|AGK25708.1| DNA-directed
            RNA polymerase beta chain (chloroplast) [Cymbidium
            tortisepalum]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_008081566.1| DNA-directed RNA polymerase beta chain (chloroplast) [Cymbidium
            aloifolium] gi|482662011|gb|AGK25240.1| DNA-directed RNA
            polymerase beta chain (chloroplast) [Cymbidium
            aloifolium]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>gb|AAW82495.1| RNA polymerase beta chain [Phalaenopsis aphrodite subsp. formosana]
          Length = 1091

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 934  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 966


>gb|AFU95613.1| RpoB, partial (chloroplast) [Podocalyx loranthoides]
          Length = 1107

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 31/39 (79%), Positives = 33/39 (84%)
 Frame = +3

Query: 798  ATYEIEHNLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGK 914
            A+ +   N WVFEPEYPGKSRIFDGRTGD FEQPVIIGK
Sbjct: 943  ASKQTAXNPWVFEPEYPGKSRIFDGRTGDLFEQPVIIGK 981


>ref|YP_006503684.1| RNA polymerase beta subunit (chloroplast) [Erycina pusilla]
            gi|339431296|gb|AEJ72490.1| RNA polymerase beta subunit
            (chloroplast) [Erycina pusilla]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_006073260.1| RNA polymerase beta subunit (chloroplast) [Phalaenopsis equestris]
            gi|329668864|gb|AEB96311.1| RNA polymerase beta subunit
            (chloroplast) [Phalaenopsis equestris]
          Length = 1091

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 934  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 966


>gb|AFB18355.1| RNA polymerase beta subunit [Syngonanthus chrysanthus]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>gb|AFB18340.1| RNA polymerase beta subunit [Juncus effusus]
          Length = 1077

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 917  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 949


>gb|AEX94323.1| RNA polymerase beta subunit (chloroplast) [Agapanthus africanus]
            gi|376008221|gb|AFB18320.1| RNA polymerase beta subunit
            [Agapanthus praecox]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_003587460.1| RNA polymerase beta subunit [Oncidium hybrid cultivar]
            gi|254833101|gb|ACT83104.1| RNA polymerase beta subunit
            [Oncidium hybrid cultivar]
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_358570.2| RNA polymerase beta subunit [Phalaenopsis aphrodite subsp. formosana]
            gi|158518566|sp|Q3BAP8.2|RPOB_PHAAO RecName:
            Full=DNA-directed RNA polymerase subunit beta; AltName:
            Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
            subunit beta; Short=RNA polymerase subunit beta
          Length = 1070

 Score = 68.9 bits (167), Expect = 5e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDLFEQPVLIGKS 945


>ref|YP_008993965.1| RNA polymerase beta subunit (chloroplast) [Pharus lappulaceus]
            gi|449020249|gb|AGE65746.1| RNA polymerase beta subunit
            (chloroplast) [Pharus lappulaceus]
          Length = 1075

 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPVIIGKS
Sbjct: 918  NPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKS 950


>ref|YP_008592631.1| RNA polymerase beta subunit (chloroplast) [Berberis bealei]
            gi|536462672|gb|AGU37037.1| RNA polymerase beta subunit
            (chloroplast) [Berberis bealei]
          Length = 1070

 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPVIIGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKS 945


>ref|YP_008081357.1| RNA polymerase beta subunit (chloroplast) [Tetracentron sinense]
            gi|479279195|gb|AGJ72049.1| RNA polymerase beta subunit
            (chloroplast) [Tetracentron sinense]
          Length = 1070

 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 31/33 (93%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPVIIGKS
Sbjct: 913  NPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGKS 945


>gb|AGC38236.1| RNA polymerase beta subunit (chloroplast) [Cryptochloa strictiflora]
          Length = 1075

 Score = 68.2 bits (165), Expect = 9e-09
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +3

Query: 819  NLWVFEPEYPGKSRIFDGRTGDFFEQPVIIGKS 917
            N WVFEPEYPGKSRIFDGRTGD FEQPV+IGKS
Sbjct: 918  NPWVFEPEYPGKSRIFDGRTGDSFEQPVLIGKS 950