BLASTX nr result
ID: Sinomenium22_contig00030646
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00030646
(774 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [M... 303 3e-80
ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [M... 303 3e-80
ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [M... 303 3e-80
ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [M... 303 3e-80
gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnol... 303 3e-80
ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|34... 303 3e-80
ref|YP_009026873.1| RNA polymerase beta subunit [Magnolia tripet... 302 1e-79
ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [M... 302 1e-79
ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [M... 302 1e-79
ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [M... 302 1e-79
ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [M... 302 1e-79
ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [M... 302 1e-79
ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangs... 302 1e-79
ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulip... 302 1e-79
ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [M... 296 5e-78
ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus] gi... 293 5e-77
ref|YP_001586174.1| RNA polymerase beta subunit [Acorus american... 293 5e-77
ref|YP_004327649.1| RNA polymerase beta subunit [Hevea brasilien... 288 2e-75
ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea] ... 286 4e-75
ref|YP_004564095.1| RNA polymerase beta subunit [Nelumbo nucifer... 286 4e-75
>ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [Magnolia salicifolia]
Length = 1079
Score = 303 bits (777), Expect = 3e-80
Identities = 150/163 (92%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FIDRGLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [Magnolia sprengeri]
Length = 1079
Score = 303 bits (777), Expect = 3e-80
Identities = 150/163 (92%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FIDRGLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliifera]
Length = 1079
Score = 303 bits (777), Expect = 3e-80
Identities = 150/163 (92%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FIDRGLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [Magnolia kobus]
Length = 1079
Score = 303 bits (777), Expect = 3e-80
Identities = 150/163 (92%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FIDRGLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliiflora]
Length = 1079
Score = 303 bits (777), Expect = 3e-80
Identities = 150/163 (92%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FIDRGLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|343887531|gb|AEM65210.1|
RpoB [Magnolia denudata] gi|372862243|gb|AEX98326.1| RNA
polymerase beta subunit (chloroplast) [Magnolia
denudata]
Length = 1079
Score = 303 bits (777), Expect = 3e-80
Identities = 150/163 (92%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FIDRGLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDRGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_009026873.1| RNA polymerase beta subunit [Magnolia tripetala]
gi|608608396|gb|AHW51950.1| RNA polymerase beta subunit
[Magnolia tripetala]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [Magnolia sinica]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [Magnolia dealbata]
gi|570759917|ref|YP_008993340.1| RNA polymerase beta
subunit (chloroplast) [Magnolia pyramidata]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [Magnolia cathcartii]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora]
gi|372862835|gb|AEX98911.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
gi|372863005|gb|AEX99079.1| RNA polymerase beta subunit
(chloroplast) [Magnolia grandiflora]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis]
gi|452848763|ref|YP_007474444.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|372862413|gb|AEX98494.1| RNA polymerase beta
subunit (chloroplast) [Magnolia officinalis]
gi|372862496|gb|AEX98576.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862581|gb|AEX98660.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862666|gb|AEX98744.1| RNA polymerase beta subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangsiensis]
gi|302424172|gb|ADL39048.1| RNA polymerase beta subunit
[Magnolia kwangsiensis]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_740194.1| RNA polymerase beta subunit [Liriodendron tulipifera]
gi|113200986|gb|ABI32501.1| RNA polymerase beta subunit
[Liriodendron tulipifera]
Length = 1079
Score = 302 bits (773), Expect = 1e-79
Identities = 149/163 (91%), Positives = 156/163 (95%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FSINGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSINGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDW 163
>ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [Magnolia odora]
Length = 1079
Score = 296 bits (758), Expect = 5e-78
Identities = 147/163 (90%), Positives = 154/163 (94%)
Frame = +3
Query: 285 IFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQ 464
+FS NGKLKML DGN GM TIPGFSQIQFEGF FID+GLTEEL+KFPKIEDTDQE+EFQ
Sbjct: 1 MFSRNGKLKMLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELHKFPKIEDTDQEIEFQ 60
Query: 465 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLG 644
LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QT+FIGNIPLMNSLG
Sbjct: 61 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTVFIGNIPLMNSLG 120
Query: 645 TLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
T IVNGIYRIVINQILQSPGIYYRSELDHN ISVY GTIISDW
Sbjct: 121 TSIVNGIYRIVINQILQSPGIYYRSELDHNEISVYTGTIISDW 163
>ref|YP_319757.1| RNA polymerase beta subunit [Acorus calamus]
gi|74381701|emb|CAI53786.1| RNA polymerase beta subunit
[Acorus calamus]
Length = 1083
Score = 293 bits (750), Expect = 5e-77
Identities = 146/166 (87%), Positives = 152/166 (91%)
Frame = +3
Query: 276 MNGIFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEM 455
M +FSIN KLKM DGN GMFTIPGFSQIQFEGF FID+GL EE +KFPKIEDTDQE+
Sbjct: 1 MGFLFSINRKLKMPRDGNEGMFTIPGFSQIQFEGFCRFIDQGLMEEFHKFPKIEDTDQEI 60
Query: 456 EFQLFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMN 635
EFQLFVE YQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QTIFIGNIPLMN
Sbjct: 61 EFQLFVERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTIFIGNIPLMN 120
Query: 636 SLGTLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
SLGT IVNGIYRIVINQILQSPGIYYRSELDHNGISVY TIISDW
Sbjct: 121 SLGTFIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTSTIISDW 166
>ref|YP_001586174.1| RNA polymerase beta subunit [Acorus americanus]
gi|182676548|sp|A9LYH7.1|RPOB_ACOAM RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|160369845|gb|ABX38736.1| RNA polymerase beta subunit
[Acorus americanus]
Length = 1083
Score = 293 bits (750), Expect = 5e-77
Identities = 146/166 (87%), Positives = 152/166 (91%)
Frame = +3
Query: 276 MNGIFSINGKLKMLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEM 455
M +FSIN KLKM DGN GMFTIPGFSQIQFEGF FID+GL EE +KFPKIEDTDQE+
Sbjct: 1 MGFLFSINRKLKMPRDGNEGMFTIPGFSQIQFEGFCRFIDQGLMEEFHKFPKIEDTDQEI 60
Query: 456 EFQLFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMN 635
EFQLFVE YQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QTIFIGNIPLMN
Sbjct: 61 EFQLFVERYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTIFIGNIPLMN 120
Query: 636 SLGTLIVNGIYRIVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
SLGT IVNGIYRIVINQILQSPGIYYRSELDHNGISVY TIISDW
Sbjct: 121 SLGTFIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTSTIISDW 166
>ref|YP_004327649.1| RNA polymerase beta subunit [Hevea brasiliensis]
gi|308523494|gb|ADO33544.1| RNA polymerase beta subunit
[Hevea brasiliensis]
Length = 1070
Score = 288 bits (736), Expect = 2e-75
Identities = 140/154 (90%), Positives = 147/154 (95%)
Frame = +3
Query: 312 MLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQLFVETYQLV 491
MLGDGNGGM TIPGF+QIQFEGF FID+GLTEELYKFPKIEDTDQE+EFQLFVETYQLV
Sbjct: 1 MLGDGNGGMSTIPGFNQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60
Query: 492 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLGTLIVNGIYR 671
EPLIKERDAVYES+TYSSELYV AGLIWKT RD+Q+QTIFIGNIPLMNSLGT I+NGIYR
Sbjct: 61 EPLIKERDAVYESITYSSELYVSAGLIWKTSRDMQEQTIFIGNIPLMNSLGTFIINGIYR 120
Query: 672 IVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
IVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 IVINQILQSPGIYYRSELDHNGISVYTGTIISDW 154
>ref|YP_004563859.1| RNA polymerase beta subunit [Nelumbo lutea]
gi|224474126|gb|ACN49315.1| RNA polymerase beta subunit
[Nelumbo lutea] gi|383286884|gb|AFH01533.1| RNA
polymerase beta subunit (chloroplast) [Nelumbo lutea]
Length = 1070
Score = 286 bits (733), Expect = 4e-75
Identities = 142/154 (92%), Positives = 146/154 (94%)
Frame = +3
Query: 312 MLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQLFVETYQLV 491
ML DGN GM TIPGFSQIQFEGF FID+GLTEELYKFPKIEDTDQE+EFQLFVETYQLV
Sbjct: 1 MLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60
Query: 492 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLGTLIVNGIYR 671
EPLI ERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QTIFIGNIPLMNSLGT IVNGIYR
Sbjct: 61 EPLINERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTIFIGNIPLMNSLGTSIVNGIYR 120
Query: 672 IVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
IVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 IVINQILQSPGIYYRSELDHNGISVYTGTIISDW 154
>ref|YP_004564095.1| RNA polymerase beta subunit [Nelumbo nucifera]
gi|224474214|gb|ACN49400.1| RNA polymerase beta subunit
[Nelumbo nucifera] gi|290489618|gb|ADD31193.1| RNA
polymerase beta subunit protein [Nelumbo nucifera]
gi|383286789|gb|AFH01439.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
gi|519666904|gb|AGO98516.1| RNA polymerase beta subunit
(chloroplast) [Nelumbo nucifera]
Length = 1070
Score = 286 bits (733), Expect = 4e-75
Identities = 142/154 (92%), Positives = 146/154 (94%)
Frame = +3
Query: 312 MLGDGNGGMFTIPGFSQIQFEGFRGFIDRGLTEELYKFPKIEDTDQEMEFQLFVETYQLV 491
ML DGN GM TIPGFSQIQFEGF FID+GLTEELYKFPKIEDTDQE+EFQLFVETYQLV
Sbjct: 1 MLRDGNEGMSTIPGFSQIQFEGFCRFIDQGLTEELYKFPKIEDTDQEIEFQLFVETYQLV 60
Query: 492 EPLIKERDAVYESLTYSSELYVPAGLIWKTGRDIQQQTIFIGNIPLMNSLGTLIVNGIYR 671
EPLI ERDAVYESLTYSSELYVPAGLIWKTGRD+Q+QTIFIGNIPLMNSLGT IVNGIYR
Sbjct: 61 EPLINERDAVYESLTYSSELYVPAGLIWKTGRDMQEQTIFIGNIPLMNSLGTSIVNGIYR 120
Query: 672 IVINQILQSPGIYYRSELDHNGISVYAGTIISDW 773
IVINQILQSPGIYYRSELDHNGISVY GTIISDW
Sbjct: 121 IVINQILQSPGIYYRSELDHNGISVYTGTIISDW 154