BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00030552
         (319 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    92   2e-27
ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas...    96   2e-26
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...    93   6e-26
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...    89   6e-26
ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Caps...    84   2e-25
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...    86   2e-25
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    91   2e-25
dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]      89   3e-25
ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutr...    89   3e-25
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    91   5e-25
ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis ...    88   5e-25
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...    86   1e-24
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...    94   1e-24
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...    82   2e-24
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]    87   4e-24
gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [L...    84   8e-24
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    89   1e-23
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    89   1e-23
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]      84   3e-23
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     84   3e-23

>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score = 92.4 bits (228), Expect(2) = 2e-27
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFASPE+VT ALNA+G  +L L   PLKVS GPENP+F+N+RRRT +PFK S+V VE
Sbjct: 79  AFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPENPYFLNQRRRTTTPFKMSDVLVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSPGE 147



 Score = 55.8 bits (133), Expect(2) = 2e-27
 Identities = 21/37 (56%), Positives = 29/37 (78%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G+++RCRLK SWTPP+SYP  ++    N +RTDNY+K
Sbjct: 38  GLVYRCRLKTSWTPPESYPEFNIIDTANIRRTDNYKK 74


>ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
           gi|561010117|gb|ESW09024.1| hypothetical protein
           PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score = 95.5 bits (236), Expect(2) = 2e-26
 Identities = 48/69 (69%), Positives = 54/69 (78%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFASPE+VT ALNA+GR +L L   PLKVS GPENP+F+NKRRRT  PFK S+V VE
Sbjct: 79  AFVHFASPESVTAALNASGRCDLFLKNEPLKVSCGPENPYFLNKRRRTTIPFKMSDVIVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSPGE 147



 Score = 49.3 bits (116), Expect(2) = 2e-26
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G+++RCRLK SWTPP+SYP  ++      + TD+Y+K
Sbjct: 38  GLVYRCRLKTSWTPPESYPEFNITDTAKIKGTDDYKK 74


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
           gi|223545464|gb|EEF46969.1| RNA-dependent RNA
           polymerase, putative [Ricinus communis]
          Length = 1203

 Score = 92.8 bits (229), Expect(2) = 6e-26
 Identities = 46/69 (66%), Positives = 52/69 (75%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFASP++ T A NAAG  EL  NG P+KVSLGPENPF +N+RRRT  PFK S+V VE
Sbjct: 79  AFVHFASPDSATWAKNAAGHCELFFNGRPVKVSLGPENPFHLNQRRRTTIPFKLSDVHVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSRDE 147



 Score = 50.4 bits (119), Expect(2) = 6e-26
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G +WRCRLK SWTPP+SYP  ++      QR D Y +
Sbjct: 38  GQVWRCRLKTSWTPPESYPNFEITDTAVIQRVDAYRR 74


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1200

 Score = 89.0 bits (219), Expect(2) = 6e-26
 Identities = 43/69 (62%), Positives = 52/69 (75%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFA P++ T A+NA+GR EL LN   LKVSLGP+NPF +N+RRRT +PFK S+VG E
Sbjct: 79  AFVHFALPQSATLAMNASGRCELFLNNKALKVSLGPKNPFTLNQRRRTTTPFKLSDVGFE 138

Query: 29  FGTLVGEHE 3
            G LV   E
Sbjct: 139 IGNLVSRDE 147



 Score = 54.3 bits (129), Expect(2) = 6e-26
 Identities = 18/37 (48%), Positives = 28/37 (75%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G++WRCRLK SWTPP+SYP  ++  +   +RT++Y +
Sbjct: 38  GLVWRCRLKTSWTPPESYPNFEITDITKIERTEDYRR 74


>ref|XP_006290518.1| hypothetical protein CARUB_v10016597mg [Capsella rubella]
           gi|482559225|gb|EOA23416.1| hypothetical protein
           CARUB_v10016597mg [Capsella rubella]
          Length = 1197

 Score = 83.6 bits (205), Expect(2) = 2e-25
 Identities = 39/69 (56%), Positives = 53/69 (76%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFA  E+   A++AAG+ +LIL+G PLKVSLGP+NP+ +N+RRRT +P+K + V +E
Sbjct: 79  AFVHFALSESTNHAMDAAGQCKLILDGQPLKVSLGPKNPYTLNQRRRTTTPYKMTGVSLE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSRDE 147



 Score = 58.2 bits (139), Expect(2) = 2e-25
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G++WRCRLKNSWTPP SYP  ++A   N  R D+Y+K
Sbjct: 38  GLVWRCRLKNSWTPPGSYPNFEIADTSNIPRIDDYKK 74


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score = 85.9 bits (211), Expect(2) = 2e-25
 Identities = 41/64 (64%), Positives = 51/64 (79%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFASP+AVT A++AAGR EL  N   LKVSLGPENP+++N+RRR  +PFK  +V +E
Sbjct: 79  AFVHFASPQAVTWAVDAAGRTELAFNNQLLKVSLGPENPYYLNRRRRDTTPFKLPDVSLE 138

Query: 29  FGTL 18
            GTL
Sbjct: 139 IGTL 142



 Score = 55.8 bits (133), Expect(2) = 2e-25
 Identities = 21/37 (56%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G++WRCRLK SWTPP+SYP  ++      QR DNY+K
Sbjct: 38  GLVWRCRLKTSWTPPESYPNFEITDTTVIQRKDNYKK 74


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
           tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
           tuberosum]
          Length = 1198

 Score = 90.9 bits (224), Expect(2) = 2e-25
 Identities = 47/69 (68%), Positives = 51/69 (73%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFAS E+   AL AA R EL L   PLKVSLGPENPF +NKRRRTI PFKFS+VGVE
Sbjct: 78  AFVHFASSESAQNALAAARRDELFLEEKPLKVSLGPENPFNMNKRRRTIMPFKFSDVGVE 137

Query: 29  FGTLVGEHE 3
            G LV   +
Sbjct: 138 IGVLVSNDD 146



 Score = 50.4 bits (119), Expect(2) = 2e-25
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G +WRCRLK S TPPDSYP  D+  VEN +R +NY K
Sbjct: 38  GQVWRCRLKTSSTPPDSYPTYDI-DVENVRRMNNYIK 73


>dbj|BAJ34538.1| unnamed protein product [Thellungiella halophila]
          Length = 998

 Score = 88.6 bits (218), Expect(2) = 3e-25
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHF SPE+   A++AAG+ +LIL+G PLKVSLGPENP+ +N+RRRT +P K S + VE
Sbjct: 79  AFVHFVSPESAACAMDAAGQCKLILDGQPLKVSLGPENPYTLNQRRRTTTPLKLSGISVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSRDE 147



 Score = 52.4 bits (124), Expect(2) = 3e-25
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G IWRCRLKNSWTPP SYP  ++A   N +  ++Y++
Sbjct: 38  GHIWRCRLKNSWTPPGSYPNFEIADTSNIRNFNDYKR 74


>ref|XP_006404133.1| hypothetical protein EUTSA_v10010107mg [Eutrema salsugineum]
           gi|557105252|gb|ESQ45586.1| hypothetical protein
           EUTSA_v10010107mg [Eutrema salsugineum]
          Length = 927

 Score = 88.6 bits (218), Expect(2) = 3e-25
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHF SPE+   A++AAG+ +LIL+G PLKVSLGPENP+ +N+RRRT +P K S + VE
Sbjct: 95  AFVHFVSPESAACAMDAAGQCKLILDGQPLKVSLGPENPYTLNQRRRTTTPLKLSGISVE 154

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 155 IGTLVSRDE 163



 Score = 52.4 bits (124), Expect(2) = 3e-25
 Identities = 20/37 (54%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G IWRCRLKNSWTPP SYP  ++A   N +  ++Y++
Sbjct: 54  GHIWRCRLKNSWTPPGSYPNFEIADTSNIRNFNDYKR 90


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score = 90.9 bits (224), Expect(2) = 5e-25
 Identities = 45/69 (65%), Positives = 54/69 (78%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFASPE+VT ALNA+G  +L L   PLKVS GP+NP+F+N+RRRT +PFK S+V VE
Sbjct: 79  AFVHFASPESVTAALNASGCCDLFLKNQPLKVSCGPKNPYFLNQRRRTTTPFKMSDVLVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSPGE 147



 Score = 49.3 bits (116), Expect(2) = 5e-25
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G+++RCRLK SWTPP+SYP   +      +RT++Y+K
Sbjct: 38  GLVYRCRLKTSWTPPESYPEFKIIDTAKIRRTEDYKK 74


>ref|XP_002877681.1| RNA-dependent RNA polymerase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297323519|gb|EFH53940.1| RNA-dependent RNA polymerase
           6 [Arabidopsis lyrata subsp. lyrata]
          Length = 1197

 Score = 87.8 bits (216), Expect(2) = 5e-25
 Identities = 40/69 (57%), Positives = 54/69 (78%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFA PE+  RA++AAG+  LIL+G PLKVSLGP+NP+ +N+RRRT +P+K + + +E
Sbjct: 79  AFVHFAVPESAARAMDAAGQCNLILDGQPLKVSLGPKNPYTLNQRRRTTTPYKLAGISLE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSRDE 147



 Score = 52.4 bits (124), Expect(2) = 5e-25
 Identities = 19/37 (51%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G++WRCRLK SWTPP SYP  ++A   +  + D+Y+K
Sbjct: 38  GLVWRCRLKTSWTPPGSYPNFEIADTSSIPKFDDYKK 74


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score = 85.9 bits (211), Expect(2) = 1e-24
 Identities = 43/69 (62%), Positives = 50/69 (72%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFA P++ T A++AA R EL LN   LK SLGPENPF +N+RRR  +PFK S VGVE
Sbjct: 79  AFVHFALPQSATCAIDAADRCELFLNNKGLKASLGPENPFTLNQRRRKTTPFKLSGVGVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSRDE 147



 Score = 53.1 bits (126), Expect(2) = 1e-24
 Identities = 18/37 (48%), Positives = 27/37 (72%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G++WRCRLK SWTPP+SYP  ++  +    RT++Y +
Sbjct: 38  GLVWRCRLKTSWTPPESYPNFEITDITKITRTEDYRR 74


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
           gi|462422376|gb|EMJ26639.1| hypothetical protein
           PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score = 93.6 bits (231), Expect(2) = 1e-24
 Identities = 45/69 (65%), Positives = 56/69 (81%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHF SP++VT A++AAGR EL  N  PLKVSLGPENP+F+N+RRRT +PFK S+V VE
Sbjct: 78  AFVHFVSPDSVTFAMDAAGRCELFFNNEPLKVSLGPENPYFLNRRRRTKTPFKLSDVHVE 137

Query: 29  FGTLVGEHE 3
            G+LV + E
Sbjct: 138 IGSLVRQDE 146



 Score = 45.1 bits (105), Expect(2) = 1e-24
 Identities = 17/37 (45%), Positives = 29/37 (78%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G+++RCRLK SWTPP+S+P  ++ +  + +RTD+Y +
Sbjct: 38  GLVYRCRLKTSWTPPESFPNFEI-NTADVKRTDDYSR 73


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
           gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
           6 [Theobroma cacao]
          Length = 1197

 Score = 82.0 bits (201), Expect(2) = 2e-24
 Identities = 39/69 (56%), Positives = 51/69 (73%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFASP   T A++AAGR EL+ N   LKVSLGPENP+++N+RRR  +PFK S+V ++
Sbjct: 79  AFVHFASPLTATWAVDAAGRTELVFNNQLLKVSLGPENPYYLNRRRRNTTPFKLSDVCLD 138

Query: 29  FGTLVGEHE 3
            G +V   E
Sbjct: 139 IGGMVSRDE 147



 Score = 56.2 bits (134), Expect(2) = 2e-24
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           GV+WRCRLK SWTPP+SYP  ++      QRTD+Y+K
Sbjct: 38  GVVWRCRLKTSWTPPESYPNFEILDSTVIQRTDDYKK 74


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 87.0 bits (214), Expect(2) = 4e-24
 Identities = 43/69 (62%), Positives = 51/69 (73%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFAS E+   AL AAG  EL+L   PL VSLGPENP+ +N+RRRT  PFKFS+V VE
Sbjct: 78  AFVHFASSESAKHALAAAGGNELVLGKKPLIVSLGPENPYRLNQRRRTTMPFKFSDVSVE 137

Query: 29  FGTLVGEHE 3
            G LV +H+
Sbjct: 138 MGVLVSKHD 146



 Score = 50.1 bits (118), Expect(2) = 4e-24
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G +WRCRLK S TPPDSYP  D+   E  QR +NYEK
Sbjct: 38  GQVWRCRLKISSTPPDSYPTYDI-DAERVQRMNNYEK 73


>gb|AGU69384.1| RNA-dependendent RNA polymerase 6-like protein [Lotus japonicus]
          Length = 1201

 Score = 83.6 bits (205), Expect(2) = 8e-24
 Identities = 41/69 (59%), Positives = 52/69 (75%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFA PE+VT AL+A+G  +L+  G PLKV  GP+NP+F+N+RRR  +PFK S+V VE
Sbjct: 79  AFVHFALPESVTEALDASGSCDLMWEGKPLKVISGPQNPYFLNQRRRKETPFKLSDVLVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSPEE 147



 Score = 52.4 bits (124), Expect(2) = 8e-24
 Identities = 21/37 (56%), Positives = 29/37 (78%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G+++RCRLK SWTPP+SYP  +VA     +RTD+Y+K
Sbjct: 38  GLVYRCRLKTSWTPPESYPEFNVADTALVKRTDDYKK 74


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
           sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
           sinensis]
          Length = 1197

 Score = 89.4 bits (220), Expect(2) = 1e-23
 Identities = 46/69 (66%), Positives = 52/69 (75%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFA P  VTRA++AAGR EL LNG  LKVSLGPENPF +N+R RT +PFK  +V VE
Sbjct: 79  AFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRTSTPFKLPDVCVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSRDE 147



 Score = 46.2 bits (108), Expect(2) = 1e-23
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G +WRCRLK S TP +SYP   V +    ++TD+YEK
Sbjct: 38  GGVWRCRLKTSCTPSESYPDFSVTNTAEVRKTDDYEK 74


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
           sinensis]
          Length = 1025

 Score = 89.4 bits (220), Expect(2) = 1e-23
 Identities = 46/69 (66%), Positives = 52/69 (75%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFA P  VTRA++AAGR EL LNG  LKVSLGPENPF +N+R RT +PFK  +V VE
Sbjct: 79  AFVHFAMPTYVTRAVDAAGRTELFLNGQALKVSLGPENPFRLNQRGRTSTPFKLPDVCVE 138

Query: 29  FGTLVGEHE 3
            GTLV   E
Sbjct: 139 IGTLVSRDE 147



 Score = 46.2 bits (108), Expect(2) = 1e-23
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G +WRCRLK S TP +SYP   V +    ++TD+YEK
Sbjct: 38  GGVWRCRLKTSCTPSESYPDFSVTNTAEVRKTDDYEK 74


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 84.0 bits (206), Expect(2) = 3e-23
 Identities = 43/69 (62%), Positives = 50/69 (72%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFAS E+   AL AAG  ELIL   PL VSLGPENP+ +N+RRRT  PFKFS+V VE
Sbjct: 78  AFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQRRRTTMPFKFSDVSVE 137

Query: 29  FGTLVGEHE 3
            G LV + +
Sbjct: 138 MGVLVSKDD 146



 Score = 50.1 bits (118), Expect(2) = 3e-23
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G +WRCRLK S TPPDSYP  D+   E  QR +NYEK
Sbjct: 38  GQVWRCRLKISSTPPDSYPTYDI-DAEKVQRMNNYEK 73


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 84.0 bits (206), Expect(2) = 3e-23
 Identities = 43/69 (62%), Positives = 50/69 (72%)
 Frame = -3

Query: 209 AFVHFASPEAVTRALNAAGRGELILNGCPLKVSLGPENPFFINKRRRTISPFKFSNVGVE 30
           AFVHFAS E+   AL AAG  ELIL   PL VSLGPENP+ +N+RRRT  PFKFS+V VE
Sbjct: 78  AFVHFASSESAKHALAAAGGNELILGKKPLIVSLGPENPYRLNQRRRTTMPFKFSDVSVE 137

Query: 29  FGTLVGEHE 3
            G LV + +
Sbjct: 138 MGVLVSKDD 146



 Score = 50.1 bits (118), Expect(2) = 3e-23
 Identities = 23/37 (62%), Positives = 26/37 (70%)
 Frame = -1

Query: 319 GVIWRCRLKNSWTPPDSYPISDVASVENFQRTDNYEK 209
           G +WRCRLK S TPPDSYP  D+   E  QR +NYEK
Sbjct: 38  GQVWRCRLKISSTPPDSYPTYDI-DAEKVQRMNNYEK 73