BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00030462
         (442 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   3e-09
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...    65   1e-08
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 65   1e-08
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    65   1e-08
dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ...    63   5e-08
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    62   6e-08
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...    62   8e-08
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    60   2e-07
gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                             60   4e-07
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    60   4e-07
ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein A...    58   1e-06
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    57   2e-06
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    56   6e-06
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip...    56   6e-06

>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 35/101 (34%), Positives = 61/101 (60%)
 Frame = +1

Query: 91   SGIAGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSP 270
            SG+A  H   EKS+++   V D +   L+  + ++   LP  YL +PL + KLT  +C P
Sbjct: 717  SGLAASH---EKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKP 773

Query: 271  ILDSI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
            +++ I ++++  M+K+LSY G++ LIK++  S   YW  +F
Sbjct: 774  LVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIF 814


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
           subsp. vesca]
          Length = 958

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 32/89 (35%), Positives = 54/89 (60%)
 Frame = +1

Query: 115 NKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPILDSI*SK 294
           N  +S +F+A V  +S D + +V      + P  YL +PL+T+KL    CSP+LD I ++
Sbjct: 559 NVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSKLRMQDCSPLLDRIETR 618

Query: 295 SEGSMSKILSYPGKMILIKAVQ*ST*IYW 381
            +   +K+LS+ G++ LI++V  S  +YW
Sbjct: 619 IKSWENKVLSFAGRLQLIQSVLSSIQVYW 647


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 36/107 (33%), Positives = 59/107 (55%)
 Frame = +1

Query: 73  SI*KGISGIAGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLT 252
           +I K  +G +G HI+ EKS L++A V + +++ +          LP  YL LPL+T ++T
Sbjct: 296 NIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMT 355

Query: 253 AHKCSPILDSI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
               SP+LD + SK     ++ LSY G++ LI +V  S   +W   +
Sbjct: 356 TADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 402


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 35/107 (32%), Positives = 59/107 (55%)
 Frame = +1

Query: 73   SI*KGISGIAGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLT 252
            +I K  +G +G HI+ EKS L++A+V + +++ +          LP  YL  PL+T ++T
Sbjct: 865  NIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMT 924

Query: 253  AHKCSPILDSI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
                SP+LD + SK     ++ LSY G++ LI +V  S   +W   +
Sbjct: 925  TADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 971


>dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1115

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 35/98 (35%), Positives = 53/98 (54%)
 Frame = +1

Query: 100 AGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPILD 279
           +G  IN EK+ L+ A V DH++  +        + LP  YL LPLVT +LT    SP+ +
Sbjct: 649 SGLKINMEKTTLYTAGVSDHNRHMMISRYPFGLAQLPVRYLGLPLVTKRLTKEDLSPLFE 708

Query: 280 SI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
            I ++     S+ LS+ G++ LI +V  ST  +W   F
Sbjct: 709 QIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAF 746


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/97 (37%), Positives = 51/97 (52%)
 Frame = +1

Query: 103 GCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPILDS 282
           G  I  EK+ L++A V DHS+  +S         LP  YL LPLVT +LT    SP++D 
Sbjct: 454 GLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQ 513

Query: 283 I*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
           I  +     S+ LS+ G++ LI +V  S   +W   F
Sbjct: 514 IRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAF 550


>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 35/98 (35%), Positives = 52/98 (53%)
 Frame = +1

Query: 100 AGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPILD 279
           +G  IN EK+ L+ A V DH++  +          LP  YL LPLVT +LT    SP+ +
Sbjct: 137 SGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPVRYLGLPLVTKRLTKEDLSPLFE 196

Query: 280 SI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
            I ++     S+ LS+ G++ LI +V  ST  +W   F
Sbjct: 197 QIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAF 234


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/101 (30%), Positives = 57/101 (56%)
 Frame = +1

Query: 91   SGIAGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSP 270
            S  +G   + EKS ++   V     + L+  + +   SLP  YL +PL + KL   +C P
Sbjct: 717  SKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQCKP 776

Query: 271  ILDSI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
            ++D I ++++G ++ +LSY G++ L+K +  S   YW ++F
Sbjct: 777  LIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIF 817


>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 31/86 (36%), Positives = 48/86 (55%)
 Frame = +1

Query: 100 AGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPILD 279
           +G  +N  K ++F+  + D  K  LS  +GI   + P  YL LP+ T++LT     P+L+
Sbjct: 96  SGLEVNTGKCEMFLGGLTDSEKQELSSCMGITLGNFPMKYLGLPVNTHRLTKADYEPLLE 155

Query: 280 SI*SKSEGSMSKILSYPGKMILIKAV 357
            I +K     SK+LSY GK+ L+  V
Sbjct: 156 KIRAKVSNWSSKLLSYAGKIQLVSVV 181


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
            gi|20197043|gb|AAM14892.1| putative reverse transcriptase
            [Arabidopsis thaliana]
          Length = 1412

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 34/107 (31%), Positives = 56/107 (52%)
 Frame = +1

Query: 73   SI*KGISGIAGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLT 252
            +I K  +  +G +I+ EKS LF+A +   +   +         SLP  YL LPL+T ++T
Sbjct: 978  AIFKDFAAFSGLNISLEKSTLFMASISSETCASILARFPFDSGSLPVRYLGLPLMTKRMT 1037

Query: 253  AHKCSPILDSI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
               C P+L+ I S+     ++ LSY G++ L+ +V  S   +W   F
Sbjct: 1038 LADCLPLLEKIRSRISSWKNRFLSYAGRLQLLNSVISSLTKFWISAF 1084


>ref|XP_006584200.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 239

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 30/99 (30%), Positives = 52/99 (52%)
 Frame = +1

Query: 97  IAGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPIL 276
           ++G  IN +KS ++ A +  H    + ++ G      P  YL +PL++++L     +P+L
Sbjct: 54  VSGLSINSDKSAIYSAGIRPHELSHIQQLTGFNLGGFPFRYLGVPLLSSRLNVCHYAPLL 113

Query: 277 DSI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
             I    +G   K LSY GK+ LI+AV      +W ++F
Sbjct: 114 SKITGLIQGWSRKSLSYAGKLELIRAVIQGIVNFWMKIF 152


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/93 (31%), Positives = 49/93 (52%)
 Frame = +1

Query: 115 NKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPILDSI*SK 294
           N  KS +F+  V       L+  +G     LP  YL LPL+  +L +  C P++  I S+
Sbjct: 4   NLAKSSIFLVGVNSSKASRLAANMGFSIGHLPVRYLGLPLLFGRLQSCDCDPLIQRITSR 63

Query: 295 SEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
                +++LS+ G++ L+++V  S  +YW  VF
Sbjct: 64  IRSWSARVLSFAGRLQLVRSVLRSLQVYWASVF 96


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
 Frame = +1

Query: 100  AGCHINKEKSDLFVADVGDHSKD*-LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPIL 276
            +G  IN+EK++L + D G+ +++  L+  LGI   SLP  YL +PL++ K+      P++
Sbjct: 726  SGLGINREKTELLL-DGGNFARNRSLADNLGITHGSLPVRYLGVPLMSQKMRRQDYQPLV 784

Query: 277  DSI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
            D I S+     ++ LS+ G++ L+K+V  ST  +W  VF
Sbjct: 785  DRINSRFTSWTARHLSFAGRLQLLKSVIYSTINFWASVF 823


>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
           72.31) [Arabidopsis thaliana]
          Length = 928

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/98 (31%), Positives = 50/98 (51%)
 Frame = +1

Query: 100 AGCHINKEKSDLFVADVGDHSKD*LSKVLGIKFSSLPTTYLCLPLVTNKLTAHKCSPILD 279
           +G  I+ EKS +++A V       + +        LP  YL LPLV+ +LTA  C P+++
Sbjct: 620 SGLKISMEKSTMYLAGVQASVYQEIVQKFSFDVGKLPVRYLGLPLVSKRLTASDCLPLIE 679

Query: 280 SI*SKSEGSMSKILSYPGKMILIKAVQ*ST*IYWFRVF 393
            +  K E   S+ LS+ G++ LI +   S   +W   F
Sbjct: 680 QLRKKIEAWTSRFLSFAGRLNLISSTLWSICNFWMAAF 717