BLASTX nr result
ID: Sinomenium22_contig00030324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00030324
(900 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C,... 346 6e-93
ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobr... 345 1e-92
ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobr... 345 1e-92
ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|5087015... 345 1e-92
ref|XP_007142507.1| hypothetical protein PHAVU_008G286500g [Phas... 344 2e-92
ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246... 341 3e-91
ref|XP_006595660.1| PREDICTED: heterogeneous nuclear ribonucleop... 340 6e-91
ref|XP_006447738.1| hypothetical protein CICLE_v10015084mg [Citr... 338 1e-90
ref|XP_003519672.1| PREDICTED: heterogeneous nuclear ribonucleop... 337 4e-90
ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [... 337 4e-90
ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, ... 337 4e-90
ref|XP_002301585.1| heterogeneous nuclear ribonucleoprotein [Pop... 337 4e-90
ref|XP_002320502.2| hypothetical protein POPTR_0014s15970g [Popu... 335 1e-89
ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prun... 334 3e-89
ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313... 333 7e-89
ref|XP_007215319.1| hypothetical protein PRUPE_ppa005119mg [Prun... 332 1e-88
ref|XP_004491591.1| PREDICTED: heterogeneous nuclear ribonucleop... 331 2e-88
gb|EXC34916.1| DAZ-associated protein 1 [Morus notabilis] 331 3e-88
ref|XP_006467314.1| PREDICTED: heterogeneous nuclear ribonucleop... 325 1e-86
ref|XP_004251912.1| PREDICTED: uncharacterized protein LOC101266... 325 1e-86
>ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223528341|gb|EEF30383.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 346 bits (888), Expect = 6e-93
Identities = 165/232 (71%), Positives = 191/232 (82%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTE++F++YF+Q+GTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 97 IHGSPGPGRTRKIFVGGLASTVTETDFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYD 156
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVL+KTFHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG+SRVNSFLNGYT G
Sbjct: 157 SEEAVDKVLMKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLSRVNSFLNGYTQG 216
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PS+ GGYG+RMDGRFSPV G R+GF PFG GYGMG+NFEP S SYGG NFS+NL
Sbjct: 217 YTPSAVGGYGLRMDGRFSPVAGGRSGFPPFG-SGYGMGMNFEPAFSPSYGGNANFSSNLS 275
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYSTT 203
+GRG++ PY+ S +SVTRN+WGNGGLNY+++
Sbjct: 276 YGRGMS-PYYIGNTNRFANPTGYDGGNGGNSSFFSSVTRNLWGNGGLNYNSS 326
>ref|XP_007049273.1| RNA-binding family protein isoform 3 [Theobroma cacao]
gi|508701534|gb|EOX93430.1| RNA-binding family protein
isoform 3 [Theobroma cacao]
Length = 390
Score = 345 bits (885), Expect = 1e-92
Identities = 167/231 (72%), Positives = 187/231 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IH SPGP RT+KIFVGGLA TVTES+FK+YFDQFG ITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 8 IHASPGPGRTRKIFVGGLASTVTESDFKKYFDQFGNITDVVVMYDHNTQRPRGFGFITYD 67
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V++VLLK FHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG++RVNSFLNGYT G
Sbjct: 68 SEEAVDRVLLKNFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLNRVNSFLNGYTQG 127
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PSS GGYG+RMDGRFSPV G R+GF PFG GYGMGVNFEPGL+ S+G T NFS+N+
Sbjct: 128 YTPSSVGGYGLRMDGRFSPVAGGRSGFPPFG-SGYGMGVNFEPGLNPSFGNTANFSSNIS 186
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRGL PY+ S +SVTRN+WG GGLNY+T
Sbjct: 187 YGRGLG-PYYIGNTNRFGSPIGYDASSGGNSSFFSSVTRNLWGTGGLNYNT 236
>ref|XP_007049272.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508701533|gb|EOX93429.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 391
Score = 345 bits (885), Expect = 1e-92
Identities = 167/231 (72%), Positives = 187/231 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IH SPGP RT+KIFVGGLA TVTES+FK+YFDQFG ITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 8 IHASPGPGRTRKIFVGGLASTVTESDFKKYFDQFGNITDVVVMYDHNTQRPRGFGFITYD 67
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V++VLLK FHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG++RVNSFLNGYT G
Sbjct: 68 SEEAVDRVLLKNFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLNRVNSFLNGYTQG 127
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PSS GGYG+RMDGRFSPV G R+GF PFG GYGMGVNFEPGL+ S+G T NFS+N+
Sbjct: 128 YTPSSVGGYGLRMDGRFSPVAGGRSGFPPFG-SGYGMGVNFEPGLNPSFGNTANFSSNIS 186
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRGL PY+ S +SVTRN+WG GGLNY+T
Sbjct: 187 YGRGLG-PYYIGNTNRFGSPIGYDASSGGNSSFFSSVTRNLWGTGGLNYNT 236
>ref|XP_007049271.1| HnRNP isoform 1 [Theobroma cacao] gi|508701532|gb|EOX93428.1| HnRNP
isoform 1 [Theobroma cacao]
Length = 477
Score = 345 bits (885), Expect = 1e-92
Identities = 167/231 (72%), Positives = 187/231 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IH SPGP RT+KIFVGGLA TVTES+FK+YFDQFG ITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 95 IHASPGPGRTRKIFVGGLASTVTESDFKKYFDQFGNITDVVVMYDHNTQRPRGFGFITYD 154
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V++VLLK FHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG++RVNSFLNGYT G
Sbjct: 155 SEEAVDRVLLKNFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLNRVNSFLNGYTQG 214
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PSS GGYG+RMDGRFSPV G R+GF PFG GYGMGVNFEPGL+ S+G T NFS+N+
Sbjct: 215 YTPSSVGGYGLRMDGRFSPVAGGRSGFPPFG-SGYGMGVNFEPGLNPSFGNTANFSSNIS 273
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRGL PY+ S +SVTRN+WG GGLNY+T
Sbjct: 274 YGRGLG-PYYIGNTNRFGSPIGYDASSGGNSSFFSSVTRNLWGTGGLNYNT 323
>ref|XP_007142507.1| hypothetical protein PHAVU_008G286500g [Phaseolus vulgaris]
gi|561015640|gb|ESW14501.1| hypothetical protein
PHAVU_008G286500g [Phaseolus vulgaris]
Length = 479
Score = 344 bits (883), Expect = 2e-92
Identities = 166/231 (71%), Positives = 188/231 (81%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+R+PLGGYNYG+SRVNSFLNG+T G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y+PSS GGYG+R DGRFSPV R+GF PFG GYGM +NFEPGL+ +GG NF++NL
Sbjct: 216 YSPSSLGGYGLRADGRFSPVASGRSGFAPFG-SGYGMSMNFEPGLNAGFGGNANFNSNLS 274
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRG+N PYF S +SVTRN+WGNGGL+Y T
Sbjct: 275 YGRGVN-PYFIGSSNRFGSPVGFESGNGGNNSFFSSVTRNLWGNGGLSYGT 324
>ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 341 bits (874), Expect = 3e-91
Identities = 166/231 (71%), Positives = 186/231 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YFDQFG ITDVVVMYDHNTQRPRGFGFITY+
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYE 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP RS LGG+NYG+SRVNSFL+ Y G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPIRSQLGGFNYGLSRVNSFLSAYNQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PS+ GGYGVRMDGRFSP+ G R+GF PFG GYGMG+NFEPGLSQSYGG+ NF+ NL
Sbjct: 216 YAPSTVGGYGVRMDGRFSPIAGGRSGFPPFG-SGYGMGMNFEPGLSQSYGGSANFNNNLN 274
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRGLN PY+ S +S TRN+WGNGGLN+ T
Sbjct: 275 YGRGLN-PYYIGNTNRFNSTIGYDGGNGGNSSFFSSATRNLWGNGGLNFGT 324
Score = 75.1 bits (183), Expect = 3e-11
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 13/100 (13%)
Frame = -3
Query: 865 KIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDVVEKVLLK 686
K+F+GG++ E K YF +G + + V+M D T R RGFGF+ + V E+V +K
Sbjct: 7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERV-IK 65
Query: 685 TFHELNGKMVEVKRAVPKE-------------LSPGPNRS 605
H ++G+MVE K+AVPK+ SPGP R+
Sbjct: 66 EKHNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRT 105
>ref|XP_006595660.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Glycine
max]
Length = 479
Score = 340 bits (871), Expect = 6e-91
Identities = 163/232 (70%), Positives = 187/232 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+R+PLGGYNYG++RVNSFLNG+T G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLGGYNYGLTRVNSFLNGFTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PS+ GGYG+R D RFSPV G R+GF PFG GYGM +NFEPGL+ +GG NF++NL
Sbjct: 216 YTPSTVGGYGLRADDRFSPVAGGRSGFAPFG-SGYGMSMNFEPGLNAGFGGNANFNSNLS 274
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYSTT 203
+ RG+N PYF S +SVTRN+WGNGGL+Y T+
Sbjct: 275 YDRGIN-PYFIGSSNRFGSPVGYESGNGGNNSFFSSVTRNLWGNGGLSYGTS 325
>ref|XP_006447738.1| hypothetical protein CICLE_v10015084mg [Citrus clementina]
gi|568830477|ref|XP_006469525.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Citrus sinensis] gi|557550349|gb|ESR60978.1|
hypothetical protein CICLE_v10015084mg [Citrus
clementina]
Length = 481
Score = 338 bits (868), Expect = 1e-90
Identities = 166/231 (71%), Positives = 188/231 (81%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP RSPLGGY+YG+SRVNSFLNGYT G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPTRSPLGGYHYGLSRVNSFLNGYTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PS+ GGYG+RMDGRFSPV G R+GF PFG GYGMG+ EPGL+ S+G NF++NL
Sbjct: 216 YTPSTVGGYGLRMDGRFSPVAGGRSGFPPFG-SGYGMGM-IEPGLNPSFGANANFNSNLS 273
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRGL+ PY+ S +SVTRN+WGNGGLNY++
Sbjct: 274 YGRGLS-PYYIGNPNRYGSPLGYDGGNGGNTSFFSSVTRNLWGNGGLNYNS 323
>ref|XP_003519672.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Glycine max] gi|571442491|ref|XP_006575746.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Glycine max]
Length = 475
Score = 337 bits (864), Expect = 4e-90
Identities = 162/228 (71%), Positives = 185/228 (81%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+R+PLGGYNYG++RVNSFLNG+T G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLGGYNYGLTRVNSFLNGFTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y PS+ GGYG+R DGRFSPV G R+GF PFG GYGM +NFEPGL+ +GG NF++NL
Sbjct: 216 YTPSTVGGYGLRADGRFSPVAGGRSGFAPFG-SGYGMSMNFEPGLNAGFGGNANFNSNLS 274
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLN 215
+ RG+N PYF S +SVTRN+WGNGGL+
Sbjct: 275 YDRGVN-PYFIGSSNRFGSPVGYESGNGGNNSFFSSVTRNLWGNGGLS 321
>ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear
ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 337 bits (864), Expect = 4e-90
Identities = 163/232 (70%), Positives = 184/232 (79%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 79 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 138
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V++VLLKTFHELNGKMVEVKRAVPKELSPGP RSPL GYNYG+SRVNSFLNG+
Sbjct: 139 SEEAVDQVLLKTFHELNGKMVEVKRAVPKELSPGPARSPLSGYNYGLSRVNSFLNGFNQS 198
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y+PS+ GGYG+R+DGRFSPV G R + PFG GYGMG+NFEPGLS +GG +F+ NL
Sbjct: 199 YSPSTVGGYGLRVDGRFSPVAGGRNAYAPFG-SGYGMGMNFEPGLSPGFGGNASFNGNLS 257
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYSTT 203
+GRGLN PYF S +SVTRN+WGNG LNY T+
Sbjct: 258 YGRGLN-PYFIGGSNRFGSPVGYESGNGGSNSFFSSVTRNLWGNGSLNYGTS 308
>ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula] gi|355519311|gb|AET00935.1|
Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like
protein [Medicago truncatula]
Length = 479
Score = 337 bits (864), Expect = 4e-90
Identities = 163/232 (70%), Positives = 184/232 (79%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V++VLLKTFHELNGKMVEVKRAVPKELSPGP RSPL GYNYG+SRVNSFLNG+
Sbjct: 156 SEEAVDQVLLKTFHELNGKMVEVKRAVPKELSPGPARSPLSGYNYGLSRVNSFLNGFNQS 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y+PS+ GGYG+R+DGRFSPV G R + PFG GYGMG+NFEPGLS +GG +F+ NL
Sbjct: 216 YSPSTVGGYGLRVDGRFSPVAGGRNAYAPFG-SGYGMGMNFEPGLSPGFGGNASFNGNLS 274
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYSTT 203
+GRGLN PYF S +SVTRN+WGNG LNY T+
Sbjct: 275 YGRGLN-PYFIGGSNRFGSPVGYESGNGGSNSFFSSVTRNLWGNGSLNYGTS 325
>ref|XP_002301585.1| heterogeneous nuclear ribonucleoprotein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| heterogeneous nuclear
ribonucleoprotein [Populus trichocarpa]
Length = 479
Score = 337 bits (864), Expect = 4e-90
Identities = 163/231 (70%), Positives = 185/231 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RTKKIFVGGLA TVTES+F++YFDQFG ITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 97 IHGSPGPGRTKKIFVGGLASTVTESDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYD 156
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVL+KTFHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG++RVNS LNGYT G
Sbjct: 157 SEEAVDKVLMKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLNRVNSLLNGYTQG 216
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y P + GGYG+RMD RFS V G R+GF PFG GYGMG+NFEP LS SYGG NF++NL
Sbjct: 217 YTPGAVGGYGLRMDDRFSLVAGGRSGFPPFG-SGYGMGLNFEPALSPSYGGDANFNSNLS 275
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRG++ PY+ S +S TRN+WGNGGLNY+T
Sbjct: 276 YGRGMS-PYYIGNTNNLARPVGYDGGNGGNTSFFSSATRNLWGNGGLNYNT 325
>ref|XP_002320502.2| hypothetical protein POPTR_0014s15970g [Populus trichocarpa]
gi|550324302|gb|EEE98817.2| hypothetical protein
POPTR_0014s15970g [Populus trichocarpa]
Length = 479
Score = 335 bits (859), Expect = 1e-89
Identities = 161/231 (69%), Positives = 185/231 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IH SPGP RTKKIFVGGLA TVTE++FK YFDQFGTI DVVVMYDHNTQRPRGFGFIT+D
Sbjct: 97 IHSSPGPGRTKKIFVGGLASTVTENDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFD 156
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVL++TFHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG++RVNSFLNGYT G
Sbjct: 157 SEEAVDKVLMRTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLNRVNSFLNGYTQG 216
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y P + GGYG+RMDGRFS V G R+GF PFG GYGMG+NFEP LS SYGG NF++NL
Sbjct: 217 YTPGTVGGYGLRMDGRFSSVAGVRSGFPPFG-SGYGMGMNFEPALSPSYGGNANFNSNLS 275
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRG+N PY+ S +S TRN+WGNGGLN+++
Sbjct: 276 YGRGMN-PYYIGNSNSLARPVGYDGGNGGNTSFFSSATRNLWGNGGLNHNS 325
>ref|XP_007215320.1| hypothetical protein PRUPE_ppa005132mg [Prunus persica]
gi|462411470|gb|EMJ16519.1| hypothetical protein
PRUPE_ppa005132mg [Prunus persica]
Length = 476
Score = 334 bits (856), Expect = 3e-89
Identities = 161/231 (69%), Positives = 185/231 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YF+QFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+RSP+GGYNYG+SRVNSFLNGYT G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPIGGYNYGLSRVNSFLNGYTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y P++ GGYG+ GRFSPV G R+GF PF GYGMG+N+EPGLS +GG TNF++N+
Sbjct: 216 YTPNTVGGYGL---GRFSPVAGGRSGFPPFN-SGYGMGMNYEPGLSPGFGGNTNFNSNIS 271
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+ RG++P Y S +SVTRN+WGNGGLNY T
Sbjct: 272 YPRGVSPYYINNSNRFSSPVGYDGGNGGNTSSFFSSVTRNLWGNGGLNYGT 322
>ref|XP_004293446.1| PREDICTED: uncharacterized protein LOC101313871 [Fragaria vesca
subsp. vesca]
Length = 473
Score = 333 bits (853), Expect = 7e-89
Identities = 164/228 (71%), Positives = 183/228 (80%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTE +FK+YF+QFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTEGDFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG+SRVNSFL GYT G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLSRVNSFLTGYTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
YNPS+ GGYG+ GRFSPV G R+GF PFG GYGMG+NFEPGLS +YGG NF+ N
Sbjct: 216 YNPSTVGGYGL---GRFSPVAGGRSGFPPFG-SGYGMGMNFEPGLSPNYGGNANFNNNAS 271
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLN 215
+GRGL+ PY+ S +SVTRN+WGNGGLN
Sbjct: 272 YGRGLS-PYYINNSNRFSNPVGYDGGNGGSSSFFSSVTRNLWGNGGLN 318
>ref|XP_007215319.1| hypothetical protein PRUPE_ppa005119mg [Prunus persica]
gi|462411469|gb|EMJ16518.1| hypothetical protein
PRUPE_ppa005119mg [Prunus persica]
Length = 476
Score = 332 bits (851), Expect = 1e-88
Identities = 162/231 (70%), Positives = 183/231 (79%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RT+KIFVGGLA TVTES+FK+YF+QFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPGRTRKIFVGGLASTVTESDFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+RSPLGGYN G+SRVNSFLNGYT G
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNCGLSRVNSFLNGYTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
YNPS+ GGYG+ GRFSPV R+GF PF GYGMG+N+EPGLS +GG NF++N+
Sbjct: 216 YNPSTVGGYGL---GRFSPVASGRSGFPPFA-SGYGMGMNYEPGLSPGFGGNANFNSNIS 271
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRGL+P Y S +SVTRN+W NGGLNY T
Sbjct: 272 YGRGLSPYYVNNSNRFSSPIGYDGGNGGNTSSFFSSVTRNLWANGGLNYGT 322
>ref|XP_004491591.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Cicer
arietinum]
Length = 481
Score = 331 bits (849), Expect = 2e-88
Identities = 162/232 (69%), Positives = 181/232 (78%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
I GS GP RT+KIFVGGLA TVTES+FK+YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IQGSRGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V++VLLKTFHELNGKMVEVKRAVPKELSPGP+RSPL GYNYG+SRVNSFLNG+T G
Sbjct: 156 SEEAVDQVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLSGYNYGLSRVNSFLNGFTQG 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y P++ G YG+RMDGRFSPV G R F FG GYGM +NFEPGLS +GG NF+ NL
Sbjct: 216 YTPNTVGNYGLRMDGRFSPVAGGRNAFAQFG-SGYGMSMNFEPGLSAGFGGNANFNGNLS 274
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYSTT 203
+GRGLN PYF S +SVTRN+WGNG LNY T+
Sbjct: 275 YGRGLN-PYFIGNSNRFGSPVGYESGNGGNSSFFSSVTRNLWGNGSLNYGTS 325
Score = 70.9 bits (172), Expect = 7e-10
Identities = 29/79 (36%), Positives = 51/79 (64%)
Frame = -3
Query: 865 KIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDVVEKVLLK 686
K+F+GG++ E + YF +G + + V+M D T R RGFGF+ + + V ++++K
Sbjct: 7 KLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVF-IDPAVAEIVIK 65
Query: 685 TFHELNGKMVEVKRAVPKE 629
H ++G+MVE K+AVP++
Sbjct: 66 EKHNIDGRMVEAKKAVPRD 84
>gb|EXC34916.1| DAZ-associated protein 1 [Morus notabilis]
Length = 603
Score = 331 bits (848), Expect = 3e-88
Identities = 166/232 (71%), Positives = 186/232 (80%), Gaps = 1/232 (0%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
I GSPGP RT+KIFVGGLA TVTES+FK+YF+QFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 198 IQGSPGPGRTRKIFVGGLASTVTESDFKKYFEQFGTITDVVVMYDHNTQRPRGFGFITYD 257
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRV-NSFLNGYTH 542
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+RSPLGGYNYG+SRV NSFLNGYT
Sbjct: 258 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGLSRVSNSFLNGYTQ 317
Query: 541 GYNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANL 362
GY PS+ GG+G+ GRFSPV G R+GF FG GYGMG+NFEPGLS S+GGT NF+ +L
Sbjct: 318 GYTPSTVGGFGL---GRFSPVAGGRSGFTSFG-SGYGMGMNFEPGLSTSFGGTANFNNSL 373
Query: 361 GFGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYST 206
+GRGLN PY+ S +SVTRN+WGNGGLNY T
Sbjct: 374 SYGRGLN-PYYVNNSSRFPAPIGYDGGNGGNNSFFSSVTRNLWGNGGLNYGT 424
>ref|XP_006467314.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Citrus sinensis] gi|568825901|ref|XP_006467315.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Citrus sinensis]
Length = 475
Score = 325 bits (833), Expect = 1e-86
Identities = 161/230 (70%), Positives = 181/230 (78%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RTKKIFVGGLA TVTES+FK+YFDQFG ITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 96 IHGSPGPARTKKIFVGGLASTVTESDFKKYFDQFGIITDVVVMYDHNTQRPRGFGFITYD 155
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SE+ V+KVLLKTFHELNGKMVEVKRAVPKELSPGP+R+ LG +NYG+SRV+SFLNGYT
Sbjct: 156 SEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRNQLGTHNYGLSRVSSFLNGYTQS 215
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
YNPSS GGYG+R+DGR+ PV R+GF G PGYGMG+NFEP LS S+GG N S NL
Sbjct: 216 YNPSSVGGYGLRIDGRYGPVTIGRSGFTTIG-PGYGMGLNFEPNLSPSHGGGANLSPNLS 274
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYS 209
+GRGLNP F SVL+S +RN+WGNG LNY+
Sbjct: 275 YGRGLNPS-FGGNSNRYSSPGSYGAGNGGNSSVLSSPSRNLWGNGNLNYA 323
>ref|XP_004251912.1| PREDICTED: uncharacterized protein LOC101266100 [Solanum
lycopersicum]
Length = 475
Score = 325 bits (833), Expect = 1e-86
Identities = 158/230 (68%), Positives = 175/230 (76%)
Frame = -3
Query: 898 IHGSPGPTRTKKIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 719
IHGSPGP RTKKIFVGGLA TVTES+FK YFDQFGTITDVVVMYDHNTQRPRGFGFITYD
Sbjct: 97 IHGSPGPGRTKKIFVGGLASTVTESDFKTYFDQFGTITDVVVMYDHNTQRPRGFGFITYD 156
Query: 718 SEDVVEKVLLKTFHELNGKMVEVKRAVPKELSPGPNRSPLGGYNYGMSRVNSFLNGYTHG 539
SED V++ L KT+H+LNGKM+EVKRAVPKELSPGPNRSP G+NYG+ RVN+FLN Y G
Sbjct: 157 SEDAVDRALYKTYHDLNGKMIEVKRAVPKELSPGPNRSPFNGFNYGLGRVNNFLNNYAQG 216
Query: 538 YNPSSAGGYGVRMDGRFSPVPGSRTGFLPFGPPGYGMGVNFEPGLSQSYGGTTNFSANLG 359
Y+ S GGYGVRMDGRFSPV RT F F P YGMGVN +P LS ++ G +NFS NLG
Sbjct: 217 YSLGSIGGYGVRMDGRFSPVASGRTSFSQFSSPAYGMGVNLDPALSPTFAGASNFSNNLG 276
Query: 358 FGRGLNPPYFXXXXXXXXXXXXXXXXXXXXXSVLNSVTRNVWGNGGLNYS 209
+GR LN PYF S+L+S TRNVWGNGGLN S
Sbjct: 277 YGRALN-PYFTGNSSRYTTPIGYNTGSNRGDSLLSSPTRNVWGNGGLNSS 325
Score = 70.9 bits (172), Expect = 7e-10
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 13/100 (13%)
Frame = -3
Query: 865 KIFVGGLAPTVTESEFKRYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDVVEKVLLK 686
K+F+GG++ E K YF +G + + V+M D NT R RGFGF+ + + V E+V+ +
Sbjct: 8 KLFIGGISWDTDEERLKEYFTSYGEVIEAVIMRDRNTGRARGFGFVVFANPAVAERVVNE 67
Query: 685 TFHELNGKMVEVKRAVPKE-------------LSPGPNRS 605
H ++G+ VE K+AVP++ SPGP R+
Sbjct: 68 K-HIIDGRTVEAKKAVPRDDQQIINRNNSSIHGSPGPGRT 106