BLASTX nr result
ID: Sinomenium22_contig00030303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00030303
(308 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007218738.1| hypothetical protein PRUPE_ppa009149mg [Prun... 135 8e-30
ref|XP_004308043.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containi... 133 2e-29
ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28
ref|XP_006372373.1| hypothetical protein POPTR_0017s00990g [Popu... 129 3e-28
ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citr... 127 2e-27
ref|XP_006284192.1| hypothetical protein CARUB_v10005340mg [Caps... 122 4e-26
ref|XP_002513638.1| pentatricopeptide repeat-containing protein,... 122 5e-26
ref|XP_007038844.1| Pentatricopeptide repeat (PPR) superfamily p... 120 2e-25
ref|XP_003569848.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
ref|XP_004234195.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
ref|XP_002458516.1| hypothetical protein SORBIDRAFT_03g035040 [S... 118 7e-25
ref|XP_006362659.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_006413807.1| hypothetical protein EUTSA_v10025765mg [Eutr... 117 2e-24
ref|NP_567622.1| pentatricopeptide repeat protein EMBRYO DEFECTI... 117 2e-24
gb|AFW85043.1| EMB1417 [Zea mays] 117 2e-24
gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japo... 117 2e-24
gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indi... 117 2e-24
ref|NP_001044296.1| Os01g0757700 [Oryza sativa Japonica Group] g... 117 2e-24
tpg|DAA57563.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea m... 116 3e-24
>ref|XP_007218738.1| hypothetical protein PRUPE_ppa009149mg [Prunus persica]
gi|462415200|gb|EMJ19937.1| hypothetical protein
PRUPE_ppa009149mg [Prunus persica]
Length = 305
Score = 135 bits (339), Expect = 8e-30
Identities = 69/88 (78%), Positives = 73/88 (82%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLVD 223
ML +SLP F RRLE IK S SSVV + KGPRPRYPRVWK+NKRIGTISKS KLV+
Sbjct: 1 MLTLTYSLPVFTRRLEFIKISHSRSSVVLCAAKGPRPRYPRVWKANKRIGTISKSIKLVE 60
Query: 224 CIKGLSNVKEEVYGALDSFIAWELEFPL 307
IKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 SIKGLSNVKEEVYGALDSFIAWELEFPL 88
>ref|XP_004308043.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Fragaria vesca subsp. vesca]
Length = 313
Score = 134 bits (338), Expect = 1e-29
Identities = 68/88 (77%), Positives = 72/88 (81%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLVD 223
ML +SLP F RRLE S +SVV LKGPRPRYPRVWKSNK+IGTISKS KLV+
Sbjct: 1 MLSLTYSLPVFTRRLEITGISRSRNSVVVCGLKGPRPRYPRVWKSNKKIGTISKSLKLVE 60
Query: 224 CIKGLSNVKEEVYGALDSFIAWELEFPL 307
CIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 CIKGLSNVKEEVYGALDSFIAWELEFPL 88
>ref|XP_002274318.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21190
[Vitis vinifera] gi|302143769|emb|CBI22630.3| unnamed
protein product [Vitis vinifera]
Length = 295
Score = 133 bits (335), Expect = 2e-29
Identities = 63/88 (71%), Positives = 71/88 (80%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLVD 223
MLC R+S RRL++++ P S+V KGPRPRYPRVWK+ +RIGTISKS KLVD
Sbjct: 1 MLCLRYSPATITRRLDAVEIPKNPRSIVVCGAKGPRPRYPRVWKTRQRIGTISKSAKLVD 60
Query: 224 CIKGLSNVKEEVYGALDSFIAWELEFPL 307
CIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 CIKGLSNVKEEVYGALDSFIAWELEFPL 88
>ref|XP_004140747.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Cucumis sativus]
Length = 331
Score = 130 bits (327), Expect = 2e-28
Identities = 63/89 (70%), Positives = 73/89 (82%)
Frame = +2
Query: 41 RMLCTRFSLPNFARRLESIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLV 220
RML ++ P ++R+ES+ S PSS V + KGPRPRYPRVWK+ KRIGTISK+ KLV
Sbjct: 18 RMLTLVYTFPVTSKRIESVNFSWCPSSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLV 77
Query: 221 DCIKGLSNVKEEVYGALDSFIAWELEFPL 307
DC+KGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 78 DCVKGLSNVKEEVYGALDSFIAWELEFPL 106
>ref|XP_006372373.1| hypothetical protein POPTR_0017s00990g [Populus trichocarpa]
gi|550318992|gb|ERP50170.1| hypothetical protein
POPTR_0017s00990g [Populus trichocarpa]
Length = 336
Score = 129 bits (325), Expect = 3e-28
Identities = 64/89 (71%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKTSVKPSS-VVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLV 220
MLC R+SLP R +S T+ S VV + KGPRPRYPRVWK+ +RIGTISKS KLV
Sbjct: 1 MLCLRYSLPLIPNRFQSFDTTRNTKSCVVVCAAKGPRPRYPRVWKTKRRIGTISKSAKLV 60
Query: 221 DCIKGLSNVKEEVYGALDSFIAWELEFPL 307
DCIKGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 DCIKGLSNVKEEVYGALDSFVAWELEFPL 89
>ref|XP_006422051.1| hypothetical protein CICLE_v10005483mg [Citrus clementina]
gi|568875045|ref|XP_006490621.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g21190-like [Citrus sinensis]
gi|557523924|gb|ESR35291.1| hypothetical protein
CICLE_v10005483mg [Citrus clementina]
Length = 310
Score = 127 bits (318), Expect = 2e-27
Identities = 63/88 (71%), Positives = 69/88 (78%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLVD 223
ML +SLP F + E IK S S+V + +GPRPRYPRVWK+ KRIGTISKS KLV
Sbjct: 1 MLSLSYSLPPFTKIFEPIKISRNARSLVVCAARGPRPRYPRVWKARKRIGTISKSAKLVT 60
Query: 224 CIKGLSNVKEEVYGALDSFIAWELEFPL 307
CIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 CIKGLSNVKEEVYGALDSFIAWELEFPL 88
>ref|XP_006284192.1| hypothetical protein CARUB_v10005340mg [Capsella rubella]
gi|482552897|gb|EOA17090.1| hypothetical protein
CARUB_v10005340mg [Capsella rubella]
Length = 304
Score = 122 bits (307), Expect = 4e-26
Identities = 60/89 (67%), Positives = 72/89 (80%), Gaps = 1/89 (1%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKT-SVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLV 220
MLC R+SLP + ES K S +P++VV + +GPRPR PRVWK+ KRIG+ISK+ K++
Sbjct: 1 MLCLRYSLPYLLQTRESTKLFSKRPNNVVVCAARGPRPRSPRVWKTRKRIGSISKAAKMI 60
Query: 221 DCIKGLSNVKEEVYGALDSFIAWELEFPL 307
CIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 ACIKGLSNVKEEVYGALDSFIAWELEFPL 89
>ref|XP_002513638.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223547546|gb|EEF49041.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 359
Score = 122 bits (306), Expect = 5e-26
Identities = 68/100 (68%), Positives = 73/100 (73%)
Frame = +2
Query: 8 EKSPLKSF*VLRMLCTRFSLPNFARRLESIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKR 187
EK K +MLC R LP + R E IK S SSVV S+LKG RPR PRVWK+ R
Sbjct: 23 EKKKRKILSWRQMLCLRPPLPLISTRFEVIKFSKSTSSVV-SALKGARPRAPRVWKTKPR 81
Query: 188 IGTISKSKKLVDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
IGTISKS KLV+CIKGLSNVKEEVYGALDS IAWELEFPL
Sbjct: 82 IGTISKSAKLVECIKGLSNVKEEVYGALDSLIAWELEFPL 121
>ref|XP_007038844.1| Pentatricopeptide repeat (PPR) superfamily protein isoform 1
[Theobroma cacao] gi|508776089|gb|EOY23345.1|
Pentatricopeptide repeat (PPR) superfamily protein
isoform 1 [Theobroma cacao]
Length = 258
Score = 120 bits (301), Expect = 2e-25
Identities = 59/88 (67%), Positives = 67/88 (76%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLVD 223
MLC R++LP KT+ P + V + KGPRPRYPRVWKS +RIGT+SKS KLV
Sbjct: 1 MLCCRYALPLIT------KTTGSPRNTVVCAAKGPRPRYPRVWKSRRRIGTVSKSAKLVS 54
Query: 224 CIKGLSNVKEEVYGALDSFIAWELEFPL 307
C+K LSNVKEEVYGALDSFIAWELEFPL
Sbjct: 55 CVKELSNVKEEVYGALDSFIAWELEFPL 82
>ref|XP_003569848.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Brachypodium distachyon]
Length = 296
Score = 119 bits (298), Expect = 4e-25
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLE--SIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
ML ++ P F LE ++ + K SSVV +GPRPRYPRVWK++KRIGT+SKS+KL
Sbjct: 1 MLSLKYGTPTFGLALERTAVPHTQKFSSVVVCGARGPRPRYPRVWKADKRIGTVSKSQKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V CIK LSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 VKCIKDLSNVKEEVYGALDSFVAWELEFPL 90
>ref|XP_004234195.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Solanum lycopersicum]
Length = 305
Score = 118 bits (296), Expect = 7e-25
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTRFSLPNF-ARRLESIKTSVKPS-SVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
MLC R+S F RR E+++ + +VV KGPRPRYPRVWK+ K+IGTISKS KL
Sbjct: 1 MLCLRYSPVIFPTRRQETVQLPKNYNRNVVVCEAKGPRPRYPRVWKTKKKIGTISKSLKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+CIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 VECIKGLSNVKEEVYGALDSFIAWELEFPL 90
>ref|XP_002458516.1| hypothetical protein SORBIDRAFT_03g035040 [Sorghum bicolor]
gi|241930491|gb|EES03636.1| hypothetical protein
SORBIDRAFT_03g035040 [Sorghum bicolor]
Length = 296
Score = 118 bits (296), Expect = 7e-25
Identities = 59/90 (65%), Positives = 72/90 (80%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTR-FSLPNFARRLES-IKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
M C R + P FA + ++ +K +SVV ++GPRPRYPRVWK+ K+IGTISKS+KL
Sbjct: 1 MFCLRSYWSPAFASIKDGPVRHQIKFNSVVVCGVRGPRPRYPRVWKTQKKIGTISKSQKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+CIKGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 VECIKGLSNVKEEVYGALDSFVAWELEFPL 90
>ref|XP_006362659.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21190-like [Solanum tuberosum]
Length = 308
Score = 117 bits (294), Expect = 1e-24
Identities = 62/90 (68%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTRFSLPNFA-RRLESIKTSVKPS-SVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
MLC R+S F RR ++I+ + +VV KGPRPRYPRVWK+ K+IGTISKS KL
Sbjct: 1 MLCLRYSPVIFTTRRQQTIQLPKNYNRNVVVCEAKGPRPRYPRVWKTKKKIGTISKSLKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+CIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 VECIKGLSNVKEEVYGALDSFIAWELEFPL 90
>ref|XP_006413807.1| hypothetical protein EUTSA_v10025765mg [Eutrema salsugineum]
gi|567220358|ref|XP_006413808.1| hypothetical protein
EUTSA_v10025765mg [Eutrema salsugineum]
gi|557114977|gb|ESQ55260.1| hypothetical protein
EUTSA_v10025765mg [Eutrema salsugineum]
gi|557114978|gb|ESQ55261.1| hypothetical protein
EUTSA_v10025765mg [Eutrema salsugineum]
Length = 315
Score = 117 bits (293), Expect = 2e-24
Identities = 58/89 (65%), Positives = 71/89 (79%), Gaps = 1/89 (1%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKT-SVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKLV 220
ML R+SLP + ES K S +P++VV + +GPRPR+PRVWK+ KRIG+ISK+ K++
Sbjct: 1 MLSLRYSLPYLPQTKESTKLFSKRPNNVVVCAARGPRPRHPRVWKTKKRIGSISKAAKML 60
Query: 221 DCIKGLSNVKEEVYGALDSFIAWELEFPL 307
CIK LSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 SCIKELSNVKEEVYGALDSFIAWELEFPL 89
>ref|NP_567622.1| pentatricopeptide repeat protein EMBRYO DEFECTIVE 1417 [Arabidopsis
thaliana] gi|75246109|sp|Q8LG95.1|PP332_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g21190; AltName: Full=Protein EMBRYO DEFECTIVE 1417
gi|21618230|gb|AAM67280.1| unknown [Arabidopsis
thaliana] gi|51969238|dbj|BAD43311.1| putative protein
[Arabidopsis thaliana] gi|51971351|dbj|BAD44340.1|
putative protein [Arabidopsis thaliana]
gi|51971365|dbj|BAD44347.1| putative protein
[Arabidopsis thaliana] gi|332659017|gb|AEE84417.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 307
Score = 117 bits (292), Expect = 2e-24
Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLESIKTSV---KPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKK 214
ML R+SLP + T + KP++VV + +GPRPR PRVWK+ KRIGTISK+ K
Sbjct: 1 MLSLRYSLPYLLLQTRESSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAK 60
Query: 215 LVDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
++ CIKGLSNVKEEVYGALDSFIAWELEFPL
Sbjct: 61 MIACIKGLSNVKEEVYGALDSFIAWELEFPL 91
>gb|AFW85043.1| EMB1417 [Zea mays]
Length = 296
Score = 117 bits (292), Expect = 2e-24
Identities = 59/90 (65%), Positives = 71/90 (78%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTR-FSLPNFARRLES-IKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
M C R + P+ A E ++ +K +SVV +GPRPRYPRVWK+ K+IGTISKS+KL
Sbjct: 1 MFCLRGYWSPSLAPVREGPVRHHIKFNSVVVCGARGPRPRYPRVWKTRKKIGTISKSQKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+CIKGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 VECIKGLSNVKEEVYGALDSFVAWELEFPL 90
>gb|EEE55404.1| hypothetical protein OsJ_03510 [Oryza sativa Japonica Group]
Length = 295
Score = 117 bits (292), Expect = 2e-24
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLE--SIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
M R P FA LE +I K S++V +GPRPRYPRVWK+ KRIGT+SKS+KL
Sbjct: 1 MFSVRCGPPAFAFGLERAAITHPSKFSTLVVCGARGPRPRYPRVWKTRKRIGTVSKSQKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+C+KGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 VECVKGLSNVKEEVYGALDSFVAWELEFPL 90
>gb|EEC71511.1| hypothetical protein OsI_03797 [Oryza sativa Indica Group]
Length = 295
Score = 117 bits (292), Expect = 2e-24
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLE--SIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
M R P FA LE +I K S++V +GPRPRYPRVWK+ KRIGT+SKS+KL
Sbjct: 1 MFSVRCGPPAFAFGLERAAITHPSKFSTLVVCGARGPRPRYPRVWKTRKRIGTVSKSQKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+C+KGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 VECVKGLSNVKEEVYGALDSFVAWELEFPL 90
>ref|NP_001044296.1| Os01g0757700 [Oryza sativa Japonica Group]
gi|113533827|dbj|BAF06210.1| Os01g0757700 [Oryza sativa
Japonica Group] gi|215734974|dbj|BAG95696.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 213
Score = 117 bits (292), Expect = 2e-24
Identities = 59/90 (65%), Positives = 69/90 (76%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTRFSLPNFARRLE--SIKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
M R P FA LE +I K S++V +GPRPRYPRVWK+ KRIGT+SKS+KL
Sbjct: 1 MFSVRCGPPAFAFGLERAAITHPSKFSTLVVCGARGPRPRYPRVWKTRKRIGTVSKSQKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+C+KGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 VECVKGLSNVKEEVYGALDSFVAWELEFPL 90
>tpg|DAA57563.1| TPA: hypothetical protein ZEAMMB73_276663 [Zea mays]
Length = 193
Score = 116 bits (291), Expect = 3e-24
Identities = 59/90 (65%), Positives = 70/90 (77%), Gaps = 2/90 (2%)
Frame = +2
Query: 44 MLCTR-FSLPNFARRLES-IKTSVKPSSVVFSSLKGPRPRYPRVWKSNKRIGTISKSKKL 217
M C R + P FA E ++ +K + VV +GPRPRYPRVWK+ K+IGTISKS+KL
Sbjct: 1 MFCLRNYWSPAFASVKEGPVRHHIKFNCVVVCGARGPRPRYPRVWKTRKKIGTISKSQKL 60
Query: 218 VDCIKGLSNVKEEVYGALDSFIAWELEFPL 307
V+CIKGLSNVKEEVYGALDSF+AWELEFPL
Sbjct: 61 VECIKGLSNVKEEVYGALDSFVAWELEFPL 90