BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00029339
         (616 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006854251.1| hypothetical protein AMTR_s00039p00023570 [A...   186   5e-45
ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfam...   146   4e-33
ref|XP_006395709.1| hypothetical protein EUTSA_v10005367mg, part...   145   9e-33
ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Caps...   145   9e-33
ref|XP_006853296.1| hypothetical protein AMTR_s00032p00029450 [A...   143   5e-32
ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp....   141   2e-31
ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily p...   139   7e-31
ref|NP_178437.1| pentatricopeptide repeat-containing protein [Ar...   137   3e-30
ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containi...   136   4e-30
ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containi...   136   4e-30
ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citr...   136   4e-30
ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containi...   135   7e-30
gb|ABR17838.1| unknown [Picea sitchensis]                             135   1e-29
ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prun...   134   2e-29
ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citr...   133   5e-29
ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutr...   133   5e-29
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...   132   6e-29
ref|XP_003602631.1| Pentatricopeptide repeat-containing protein ...   132   6e-29
gb|AEP33771.1| organelle transcript processing 82, partial [Thla...   132   6e-29
gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis]     132   8e-29

>ref|XP_006854251.1| hypothetical protein AMTR_s00039p00023570 [Amborella trichopoda]
           gi|548857927|gb|ERN15718.1| hypothetical protein
           AMTR_s00039p00023570 [Amborella trichopoda]
          Length = 698

 Score =  186 bits (472), Expect = 5e-45
 Identities = 98/205 (47%), Positives = 130/205 (63%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           CG + NLD G S                 TS++DMY+KC  +D A  +FEE L ++SLVS
Sbjct: 153 CGLSRNLDSGASLHAHLTGLGFLSNVWIKTSIMDMYAKCSRVDYATKVFEE-LHDKSLVS 211

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WNSLIAG+ QNGY+ EA+ LF  ML+D+   PD IT+ANV+PA   L DLQ+ + +H FI
Sbjct: 212 WNSLIAGYCQNGYEIEALELFHLMLQDTYLRPDCITMANVLPAYIGLGDLQLGQCIHGFI 271

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           IK+G  L+SD VL T ++D Y KC DIE+   LF  +  P  A+WNAMI G+ LN  A  
Sbjct: 272 IKQGFDLNSDFVLATVIIDMYAKCLDIESGFELFMILDNPTLASWNAMIFGFVLNCQASD 331

Query: 541 GVQLFLEMLLGDVPPDSITMVILLQ 615
           G++LF +ML     PDS+T+  +LQ
Sbjct: 332 GLRLFNQMLQSGHMPDSVTVTAILQ 356



 Score =  108 bits (271), Expect = 1e-21
 Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 2/176 (1%)
 Frame = +1

Query: 91  SVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSST 270
           S+I MY+K G ID A  +F+  + ER LVSWN++I+GF QNG+  EA+ +F  M R+ + 
Sbjct: 81  SLISMYAKWGRIDIAEKVFDN-MGERDLVSWNAMISGFCQNGFGTEALGVFVSMKREKTW 139

Query: 271 GPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAA 450
             + +T+  +V AC    +L    S+H  +   GL   S+V + TS++D Y KCS ++ A
Sbjct: 140 VFNEVTLLGLVQACGLSRNLDSGASLHAHL--TGLGFLSNVWIKTSIMDMYAKCSRVDYA 197

Query: 451 SLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGD--VPPDSITMVILL 612
           + +F  +   +  +WN++I+GY  N Y    ++LF  ++L D  + PD ITM  +L
Sbjct: 198 TKVFEELHDKSLVSWNSLIAGYCQNGYEIEALELF-HLMLQDTYLRPDCITMANVL 252



 Score = 88.6 bits (218), Expect = 1e-15
 Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 1/175 (0%)
 Frame = +1

Query: 91  SVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSST 270
           +++DMY K G ++ A V+F   + E++ VS+N++I G ++ G   E   LF  M  ++  
Sbjct: 389 ALLDMYVKWGRLEIAKVLFNN-MHEKNCVSYNTIIFGNAKVGLPIETFELFNEMRYENQH 447

Query: 271 GPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAA 450
              SI +  V+ AC    DL++  S+HT ++K G + D+ V    S++D Y KC    +A
Sbjct: 448 EQASIAIIGVLQACARSGDLRLGESIHTQVLKCGFQCDNFVT--NSLMDMYAKCGSFNSA 505

Query: 451 SLLFTCISK-PNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
             LF        T++WN MI+   ++ Y      L          PDSIT V LL
Sbjct: 506 HHLFNQFGPVRETSSWNVMIAACGIHGYGKEACHLMENAENDGYVPDSITFVNLL 560



 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 50/159 (31%), Positives = 88/159 (55%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T +IDMY+KC +I+  + +F   L   +L SWN++I GF  N    + + LF +ML+ S 
Sbjct: 286 TVIIDMYAKCLDIESGFELFMI-LDNPTLASWNAMIFGFVLNCQASDGLRLFNQMLQ-SG 343

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
             PDS+TV  ++ AC+ L   ++  S+H+FI+++   +   + +  +++D Y K   +E 
Sbjct: 344 HMPDSVTVTAILQACSVLGSSRLGLSIHSFILRRN-SMALSLCVSNALLDMYVKWGRLEI 402

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEM 564
           A +LF  + + N  ++N +I G           +LF EM
Sbjct: 403 AKVLFNNMHEKNCVSYNTIIFGNAKVGLPIETFELFNEM 441



 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 38/130 (29%), Positives = 69/130 (53%)
 Frame = +1

Query: 175 VSWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHT 354
           VS+N +I GF  NG++ EA+ +F RM+      P S  V + + +   L   +   S+H 
Sbjct: 7   VSYNVIIRGFGLNGFEEEALMVFNRMV-GLGFSPCSFAVKSALQSSAELRYFREGMSIHG 65

Query: 355 FIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYA 534
           ++++ GL  ++ V    S++  Y K   I+ A  +F  + + +  +WNAMISG+  N + 
Sbjct: 66  YVLRNGLVPETSVC--NSLISMYAKWGRIDIAEKVFDNMGERDLVSWNAMISGFCQNGFG 123

Query: 535 HHGVQLFLEM 564
              + +F+ M
Sbjct: 124 TEALGVFVSM 133



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 3/178 (1%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C ++G+L +G+S                  S++DMY+KCG  + A  +F +    R   S
Sbjct: 461 CARSGDLRLGESIHTQVLKCGFQCDNFVTNSLMDMYAKCGSFNSAHHLFNQFGPVRETSS 520

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADL-QMIRSMHTF 357
           WN +IA    +GY  EA  L +    D    PDSIT  N++ AC+    + +  +     
Sbjct: 521 WNVMIAACGIHGYGKEACHLMENAENDGYV-PDSITFVNLLSACSHSGLIKEGCKYFRIM 579

Query: 358 IIKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISK--PNTATWNAMISGYTLN 525
           I K G+   S+ +    MVD + +   +E A  +   I +     + W A++ G  +N
Sbjct: 580 IEKYGIHPSSEHL--GCMVDMFSRAGKVEEAYEMMMEIGERLKLESAWGALLGGCRMN 635


>ref|XP_007013367.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508783730|gb|EOY30986.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 847

 Score =  146 bits (369), Expect = 4e-33
 Identities = 78/204 (38%), Positives = 123/204 (60%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C Q+G+L++G                    ++IDMYSKCG++D A+ +FE  LQ+R ++S
Sbjct: 330 CAQSGSLELGTWVRSWINEHGLGSNIHLANALIDMYSKCGDLDTAFDLFEG-LQQRDVIS 388

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WN +I G++   Y  EA+ LF+RMLR S+  P  +T  +V+PAC +L  L + + +H +I
Sbjct: 389 WNVMIGGYTHMSYYKEALGLFRRMLR-SNIEPSDVTFLSVLPACANLGALDLGKWIHAYI 447

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
             K  +  +++ L TS++D Y KC  IEAA  +F  + + N A+WNAMISG  ++  A  
Sbjct: 448 -DKNFQNSTNISLWTSLIDMYAKCGSIEAAQQVFNGMEQKNLASWNAMISGLAMHGLADK 506

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF +M+ G + PD IT V +L
Sbjct: 507 ALELFSQMMGGGLKPDDITFVGVL 530



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 55/175 (31%), Positives = 99/175 (56%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T++I  Y   G ++ A  +F+E +  R +VSWN++IAG++Q G   EA+  F+ M+  ++
Sbjct: 258 TALITGYVSIGYMENARKLFDE-IPIRDVVSWNAMIAGYAQTGQHEEALAFFEEMI-GAN 315

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
             P+  T+ +V+ AC     L++   + ++I + G  L S++ L  +++D Y KC D++ 
Sbjct: 316 VVPNESTLVSVLSACAQSGSLELGTWVRSWINEHG--LGSNIHLANALIDMYSKCGDLDT 373

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  LF  + + +  +WN MI GYT   Y    + LF  ML  ++ P  +T + +L
Sbjct: 374 AFDLFEGLQQRDVISWNVMIGGYTHMSYYKEALGLFRRMLRSNIEPSDVTFLSVL 428



 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 55/206 (26%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
 Frame = +1

Query: 1    CGQAGNLDMGK-SXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLV 177
            C   G LD+GK                   TS+IDMY+KCG I+ A  +F   +++++L 
Sbjct: 431  CANLGALDLGKWIHAYIDKNFQNSTNISLWTSLIDMYAKCGSIEAAQQVFNG-MEQKNLA 489

Query: 178  SWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTF 357
            SWN++I+G + +G   +A+ LF +M+      PD IT   V+ ACT    L + R   + 
Sbjct: 490  SWNAMISGLAMHGLADKALELFSQMM-GGGLKPDDITFVGVLSACTHAGLLDLGRQYFSS 548

Query: 358  IIKKGLRLDSDVVLGTSMVDAYCKCSDI-EAASLLFTCISKPNTATWNAMISGYTLNHYA 534
            ++++   +  D+     MV+   +     EA +L+     KP+ A W +++    ++   
Sbjct: 549  MVQE-YAISPDLQHYGCMVNLLGRAGLFDEAEALIQNMEMKPDGAIWGSLLGACRVHKRV 607

Query: 535  HHGVQLFLEMLLGDVPPDSITMVILL 612
              G  +   +L  ++ PD+    +LL
Sbjct: 608  ELGESVAQRLL--ELEPDNPGAYVLL 631



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 45/157 (28%), Positives = 82/157 (52%)
 Frame = +1

Query: 109 SKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSIT 288
           S  G++  A ++FE  + E + V WN++I GFS +      +  + +M+  S   P+S T
Sbjct: 133 SPFGDLPYALLLFES-IDEPNQVIWNTMIRGFSLSSSPGLTLEFYVKMIW-SGIVPNSYT 190

Query: 289 VANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTC 468
              V+ +C   A  Q  + +H  ++K G  L+SD  + TS+++ Y +  +   A L+F  
Sbjct: 191 FPFVLKSCAKTASTQEGKQIHGQVLKLG--LESDAFVHTSLINMYAQNGEFGNARLVFDK 248

Query: 469 ISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDV 579
               +T ++ A+I+GY    Y  +  +LF E+ + DV
Sbjct: 249 SHLRDTVSYTALITGYVSIGYMENARKLFDEIPIRDV 285


>ref|XP_006395709.1| hypothetical protein EUTSA_v10005367mg, partial [Eutrema
           salsugineum] gi|557092348|gb|ESQ32995.1| hypothetical
           protein EUTSA_v10005367mg, partial [Eutrema salsugineum]
          Length = 667

 Score =  145 bits (366), Expect = 9e-33
 Identities = 81/203 (39%), Positives = 115/203 (56%)
 Frame = +1

Query: 4   GQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVSW 183
           G  GN ++GKS                  S++ MY+KC +   A  +FE E  E+ LV+W
Sbjct: 358 GCGGNPELGKSVHGLSIKVGLLWDTNVANSLVHMYAKCYQNRDARYVFEME-SEKDLVAW 416

Query: 184 NSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFII 363
           NS+I+GFSQNG  YEA+FLF RM  +S T P+ +TVA++  AC SL  L +  S+H + +
Sbjct: 417 NSIISGFSQNGSVYEALFLFHRMKSESVT-PNGVTVASLFSACASLGSLAIGSSLHAYSV 475

Query: 364 KKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHG 543
           K G    S V +GT+++D Y KC D E+A ++F  I + NT TW+AMI GY         
Sbjct: 476 KLGFLASSSVHVGTALLDFYAKCGDAESARIVFDTIEEKNTITWSAMIEGYGKQGDTKGS 535

Query: 544 VQLFLEMLLGDVPPDSITMVILL 612
           ++LF EML     P+  T   +L
Sbjct: 536 LELFEEMLKKQQKPNESTFTSIL 558



 Score =  109 bits (273), Expect = 6e-22
 Identities = 62/175 (35%), Positives = 101/175 (57%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KCGEI  ++ +F+  +  R++V W S+IAG+ +N    + + LF  ++R++S
Sbjct: 186 TGLLDMYAKCGEIKSSYRVFDC-IPLRNVVCWTSMIAGYVKNDLHEQGLDLFN-LMRENS 243

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              + +T   +V ACT L  L   +  H+ +IK G+ L S +V  TS++D Y KC DI  
Sbjct: 244 VSGNEVTYGTLVTACTKLGALHQGKWFHSCLIKSGIELSSCLV--TSLLDMYVKCGDISN 301

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F   S  +   W AMI GYT N  A+  + LF +M    + P+ +T+  +L
Sbjct: 302 ARRVFNEHSHVDLVMWTAMIVGYTHNGRANEALSLFQKMKGVGIKPNCVTIASVL 356



 Score = 77.4 bits (189), Expect = 3e-12
 Identities = 45/170 (26%), Positives = 85/170 (50%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++ +Y + G    A ++F++ + E     W  +++ + QN    E +  +  M    +
Sbjct: 88  TKLVSLYGEFGYTKDARLVFDQ-IPEPDFYLWKVMLSCYYQNKESQEVIKFYGFM---RN 143

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
            G D+I ++  + ACT + DL   + +H  ++K  +R   D ++ T ++D Y KC +I++
Sbjct: 144 HGYDNIVLSIALKACTEMQDLDNGKKIHCQLVKVPVR---DSIVLTGLLDMYAKCGEIKS 200

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSIT 597
           +  +F CI   N   W +MI+GY  N     G+ LF  M    V  + +T
Sbjct: 201 SYRVFDCIPLRNVVCWTSMIAGYVKNDLHEQGLDLFNLMRENSVSGNEVT 250


>ref|XP_006292336.1| hypothetical protein CARUB_v10018547mg [Capsella rubella]
           gi|482561043|gb|EOA25234.1| hypothetical protein
           CARUB_v10018547mg [Capsella rubella]
          Length = 701

 Score =  145 bits (366), Expect = 9e-33
 Identities = 80/204 (39%), Positives = 119/204 (58%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           CG  GNL++G++                  +++ MY+KC +   A  +FE E  E+ +V+
Sbjct: 358 CGLIGNLELGRAVHGLSIKVGLWDTNV-ANALVHMYAKCYQNRDARYVFEME-SEKDIVA 415

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WNS+I+GFSQNG  YEA+FLF+RM  +S T P+++TVA++  AC SL  L +  S+H + 
Sbjct: 416 WNSIISGFSQNGSIYEALFLFRRMNSESVT-PNAVTVASLFSACASLGSLAVGSSLHAYS 474

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           +K G    S V +GT+++D Y KC D E+A L+F  I + NT TW+AMI GY        
Sbjct: 475 VKLGFLASSSVHIGTALLDFYAKCGDAESARLIFNTIEEKNTITWSAMIGGYGKQGDTKG 534

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF EML     P+  T   +L
Sbjct: 535 SLELFEEMLKKQQKPNESTFTSIL 558



 Score =  114 bits (285), Expect = 2e-23
 Identities = 66/175 (37%), Positives = 102/175 (58%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KCGEI  A+ +FE+ +  R++V W S+IAG+ +N    EA+ +F RM  ++ 
Sbjct: 185 TGLLDMYAKCGEIKSAYKVFED-ITLRNVVCWTSMIAGYVKNDLHEEALVMFNRMRENTV 243

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
            G +  T   +V ACT L+ L   +  H  +IK G+ L S +V  TS++D Y KC DI  
Sbjct: 244 LG-NEYTYGTLVMACTKLSALHQGKWFHGCLIKSGIELSSCLV--TSLLDMYVKCGDISN 300

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F   S  +   W AMI GYT N+ A+  + LF +M    + P+ +T+  +L
Sbjct: 301 ARRVFDEPSHVDLVMWTAMIVGYTHNNNANEALSLFQKMKGVGMKPNCVTIASVL 355



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 43/159 (27%), Positives = 75/159 (47%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++ MY   G    A ++F++ + E    SW  ++  +  N    E +  +  M+ +  
Sbjct: 85  TKIVSMYGSFGYTKDARLMFDQ-IPEPDFYSWKVMLRCYCLNNESLEIINFYDSMI-EHG 142

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              D I  +  + ACT L DL+  + +H  I+K       D V+ T ++D Y KC +I++
Sbjct: 143 FRYDDIVFSKALKACTELQDLESGKKIHCQIVKVP---SFDNVVLTGLLDMYAKCGEIKS 199

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEM 564
           A  +F  I+  N   W +MI+GY  N      + +F  M
Sbjct: 200 AYKVFEDITLRNVVCWTSMIAGYVKNDLHEEALVMFNRM 238


>ref|XP_006853296.1| hypothetical protein AMTR_s00032p00029450 [Amborella trichopoda]
            gi|548856949|gb|ERN14763.1| hypothetical protein
            AMTR_s00032p00029450 [Amborella trichopoda]
          Length = 841

 Score =  143 bits (360), Expect = 5e-32
 Identities = 78/204 (38%), Positives = 117/204 (57%)
 Frame = +1

Query: 1    CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
            CG+ G LD GK                 G+ +IDMYSKCG+ID A  +F+  ++ER +V 
Sbjct: 476  CGEIGFLDGGKQVHSFSLKMIVFSDLFVGSGLIDMYSKCGKIDHAKFVFDR-MEERDVVG 534

Query: 181  WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
            WNS+IAGF+ N  + +A  LF+ M R +   P   + A+V+ +CT+LA +   R +H  I
Sbjct: 535  WNSMIAGFAINALNTKAFSLFKEMQR-AGMMPTQFSYASVISSCTTLASIAQGRQLHGQI 593

Query: 361  IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
            IK G    SD+ + T+++D Y KC +IE A   F+ + K N  +WN MI+G+  N  A  
Sbjct: 594  IKAGFL--SDIFVNTAIIDMYSKCGNIEGAFHTFSLMPKKNIVSWNEMINGFAQNGCADK 651

Query: 541  GVQLFLEMLLGDVPPDSITMVILL 612
             +++F EM+  D  PD IT + +L
Sbjct: 652  ALEIFREMIKTDKKPDHITFIAVL 675



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 47/166 (28%), Positives = 90/166 (54%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           +S++    K   I  A  +F++ L+  S+ SWN++I+G+ +     EA+ LF+ M  + +
Sbjct: 404 SSMLGACVKSNLIQTARTMFDK-LESPSVSSWNTIISGYFKRENYEEAINLFREMQLE-N 461

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
           T PD  T+  ++ +C  +  L   + +H+F +K  + + SD+ +G+ ++D Y KC  I+ 
Sbjct: 462 TWPDRTTLTIMLSSCGEIGFLDGGKQVHSFSLK--MIVFSDLFVGSGLIDMYSKCGKIDH 519

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPP 585
           A  +F  + + +   WN+MI+G+ +N        LF EM    + P
Sbjct: 520 AKFVFDRMEERDVVGWNSMIAGFAINALNTKAFSLFKEMQRAGMMP 565



 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 50/170 (29%), Positives = 86/170 (50%)
 Frame = +1

Query: 91  SVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSST 270
           +++  Y K GEID A  +F + + +++ VSWN+LI G  ++G+D +A+  +  M      
Sbjct: 88  AIVGAYCKSGEIDEANQLFLK-MPQKNTVSWNTLIGGLVRSGFDQKALNTYSEM-NIEGI 145

Query: 271 GPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAA 450
            P   T A+V+ AC +L D      +H  I++ GL L++ V    ++V  Y K   +  A
Sbjct: 146 KPTHFTFASVLSACGNLQDSCKGIQVHGRIVRDGLELNTYVE--NALVSMYAKSGSMAYA 203

Query: 451 SLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITM 600
             LF  + +PN  +  A++SG  L         +F EML   +  D + +
Sbjct: 204 LQLFREMKEPNEVSCTAIMSGLALTDSLEKAFMMFREMLRHGIKIDEVAL 253


>ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297814638|ref|XP_002875202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321039|gb|EFH51460.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297321040|gb|EFH51461.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 708

 Score =  141 bits (355), Expect = 2e-31
 Identities = 79/204 (38%), Positives = 115/204 (56%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           CG  GNL++G+S                  +++ MY+KC +   A  +FE E  E+ +V+
Sbjct: 365 CGLVGNLELGRSIHGLSIKVGIWDTNV-ANALVHMYAKCYQNRDAKYVFEME-SEKDIVA 422

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WNS+I+GFSQNG  +EA+FLF RM    S  P+ +TVA++  AC SL  L +  S+H + 
Sbjct: 423 WNSIISGFSQNGSIHEALFLFHRM-NTESVMPNGVTVASLFSACASLGSLAIGSSLHAYS 481

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           +K G    S V +GT+++D Y KC D E+A L+F  I + NT TW+AMI GY        
Sbjct: 482 VKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTITWSAMIGGYGKQGDTKG 541

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF EML     P+  T   +L
Sbjct: 542 SLELFEEMLKKQQKPNESTFTSVL 565



 Score =  110 bits (275), Expect = 3e-22
 Identities = 65/175 (37%), Positives = 98/175 (56%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KCGEI  ++ +FE+ +  R++V W S+IAG+ +N    E + LF RM  +S 
Sbjct: 192 TGLLDMYAKCGEIKSSYKVFED-ITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRMRENSV 250

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
            G +  T   +V ACT L  L   +  H  +IK G+ L S +V  TS++D Y KC DI  
Sbjct: 251 LG-NEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLV--TSLLDMYVKCGDISN 307

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F   S  +   W AMI GYT N   +  + LF +M    + P+ +T+  +L
Sbjct: 308 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNCVTIASVL 362



 Score =  101 bits (252), Expect = 2e-19
 Identities = 61/176 (34%), Positives = 96/176 (54%), Gaps = 2/176 (1%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           TS++DMY KCG+I  A  +F E      LV W ++I G++ NG   EA+ LFQ+M   S 
Sbjct: 293 TSLLDMYVKCGDISNARRVFNEH-SHVDLVMWTAMIVGYTHNGSVNEALSLFQKM---SG 348

Query: 268 TG--PDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDI 441
            G  P+ +T+A+V+  C  + +L++ RS+H   IK G+    D  +  ++V  Y KC   
Sbjct: 349 VGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGI---WDTNVANALVHMYAKCYQN 405

Query: 442 EAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVIL 609
             A  +F   S+ +   WN++ISG++ N   H  + LF  M    V P+ +T+  L
Sbjct: 406 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASL 461



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 44/159 (27%), Positives = 75/159 (47%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++ +Y   G    A ++F++ + E     W  ++  +  N   +E V  F  +L    
Sbjct: 92  TKLVSLYGSFGYTKDARLVFDQ-IPEPDFYLWKVILRCYCLNNESFE-VIKFYDLLMKHG 149

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
            G D I  +  + ACT + DL   + +H  I+K       D V+ T ++D Y KC +I++
Sbjct: 150 FGYDDIVFSKALKACTEVQDLDNGKKIHCQIVKVP---SFDNVVLTGLLDMYAKCGEIKS 206

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEM 564
           +  +F  I+  N   W +MI+GY  N     G+ LF  M
Sbjct: 207 SYKVFEDITLRNVVCWTSMIAGYVKNDLYEEGLVLFNRM 245


>ref|XP_007044258.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508708193|gb|EOY00090.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 700

 Score =  139 bits (350), Expect = 7e-31
 Identities = 72/179 (40%), Positives = 111/179 (62%), Gaps = 4/179 (2%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           TS++  Y+K   +  A ++F + + ER++VSWN+LIAG++QNG D EA+ LF R+L+  S
Sbjct: 323 TSMVSGYAKAASVKTARLMFMK-MMERNIVSWNALIAGYTQNGEDEEALRLF-RLLKRES 380

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRL----DSDVVLGTSMVDAYCKCS 435
             P   T  N++ AC +LADLQ+ R  HT ++K G R     DSD+ +G S++D Y KC 
Sbjct: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVLKHGFRFQFGEDSDIFVGNSLIDMYMKCG 440

Query: 436 DIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
            +E    +F  + + +  +WNAMI GY  N Y +  ++LF  ML+    PD +TM+ +L
Sbjct: 441 SVEDGDQVFKNMMERDWVSWNAMIVGYAQNGYGNKALELFKNMLVSGEKPDHVTMIGVL 499



 Score =  105 bits (263), Expect = 8e-21
 Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 31/207 (14%)
 Frame = +1

Query: 85  GTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDS 264
           G++++DMY KCG + CA   F++ + +R+ VSWNSLI  + QNG    A+ +F RM+ D 
Sbjct: 189 GSALVDMYGKCGSVCCAQRAFDD-MNQRNRVSWNSLITCYEQNGPAGVALEVFLRMM-DC 246

Query: 265 STGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCS--- 435
              PD +T+A+VV AC SL+ ++  + +H  ++K  ++L  D+VL  ++VD Y KCS   
Sbjct: 247 GIEPDEVTLASVVSACASLSAIKEGKQIHARVVKC-IKLRDDLVLCNALVDMYAKCSRIN 305

Query: 436 ----------------------------DIEAASLLFTCISKPNTATWNAMISGYTLNHY 531
                                        ++ A L+F  + + N  +WNA+I+GYT N  
Sbjct: 306 EARCVFDRMPVRNVVSETSMVSGYAKAASVKTARLMFMKMMERNIVSWNALIAGYTQNGE 365

Query: 532 AHHGVQLFLEMLLGDVPPDSITMVILL 612
               ++LF  +    V P   T   LL
Sbjct: 366 DEEALRLFRLLKRESVCPTHYTFGNLL 392



 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 56/170 (32%), Positives = 94/170 (55%)
 Frame = +1

Query: 91  SVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSST 270
           S I   +K G +D A  IF   + E    SWNS+I+GF+Q     EA++ F RM R+   
Sbjct: 90  SAITALTKFGFVDEAARIFGS-MSEHDQCSWNSIISGFAQQDKFEEALYYFVRMHREDFA 148

Query: 271 GPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAA 450
             +  +  + + AC+ L D++M   +H  ++ K L L SDV +G+++VD Y KC  +  A
Sbjct: 149 -LNEYSFGSALSACSGLKDMKMGTQIHA-LMTKTLFL-SDVYMGSALVDMYGKCGSVCCA 205

Query: 451 SLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITM 600
              F  +++ N  +WN++I+ Y  N  A   +++FL M+   + PD +T+
Sbjct: 206 QRAFDDMNQRNRVSWNSLITCYEQNGPAGVALEVFLRMMDCGIEPDEVTL 255



 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 57/177 (32%), Positives = 91/177 (51%), Gaps = 2/177 (1%)
 Frame = +1

Query: 85  GTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDS 264
           G S+IDMY KCG ++    +F + + ER  VSWN++I G++QNGY  +A+ LF+ ML  S
Sbjct: 429 GNSLIDMYMKCGSVEDGDQVF-KNMMERDWVSWNAMIVGYAQNGYGNKALELFKNML-VS 486

Query: 265 STGPDSITVANVVPACTSLADLQMIR-SMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDI 441
              PD +T+  V+ AC+    ++  R    +   + GL    D    T MVD   +   +
Sbjct: 487 GEKPDHVTMIGVLCACSHAGLVEEGRHHFSSMSSEHGLVPLKDHY--TCMVDLLGRAGCL 544

Query: 442 -EAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVIL 609
            EA +L+ T   KP+   W +++    ++     G +   E LL   P +S   V+L
Sbjct: 545 NEAKNLIETMPMKPDAVVWGSLLGACKIHRDITLG-KYVAEKLLEIDPSNSGPYVLL 600


>ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g03380, mitochondrial; Flags: Precursor
           gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis
           thaliana] gi|330250600|gb|AEC05694.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  137 bits (345), Expect = 3e-30
 Identities = 78/204 (38%), Positives = 116/204 (56%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           CG   NL++G+S                  +++ MY+KC +   A  +FE E  E+ +V+
Sbjct: 353 CGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYAKCYQNRDAKYVFEME-SEKDIVA 410

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WNS+I+GFSQNG  +EA+FLF RM  +S T P+ +TVA++  AC SL  L +  S+H + 
Sbjct: 411 WNSIISGFSQNGSIHEALFLFHRMNSESVT-PNGVTVASLFSACASLGSLAVGSSLHAYS 469

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           +K G    S V +GT+++D Y KC D ++A L+F  I + NT TW+AMI GY        
Sbjct: 470 VKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIG 529

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF EML     P+  T   +L
Sbjct: 530 SLELFEEMLKKQQKPNESTFTSIL 553



 Score =  108 bits (269), Expect = 2e-21
 Identities = 62/175 (35%), Positives = 98/175 (56%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KCGEI  A  +F + +  R++V W S+IAG+ +N    E + LF RM  ++ 
Sbjct: 180 TGLLDMYAKCGEIKSAHKVFND-ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
            G +  T   ++ ACT L+ L   +  H  ++K G+ L S +V  TS++D Y KC DI  
Sbjct: 239 LG-NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV--TSLLDMYVKCGDISN 295

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F   S  +   W AMI GYT N   +  + LF +M   ++ P+ +T+  +L
Sbjct: 296 ARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVL 350



 Score =  102 bits (253), Expect = 1e-19
 Identities = 59/174 (33%), Positives = 95/174 (54%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           TS++DMY KCG+I  A  +F E      LV W ++I G++ NG   EA+ LFQ+M +   
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEH-SHVDLVMWTAMIVGYTHNGSVNEALSLFQKM-KGVE 338

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
             P+ +T+A+V+  C  + +L++ RS+H   IK G+    D  +  ++V  Y KC     
Sbjct: 339 IKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI---WDTNVANALVHMYAKCYQNRD 395

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVIL 609
           A  +F   S+ +   WN++ISG++ N   H  + LF  M    V P+ +T+  L
Sbjct: 396 AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASL 449



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 46/175 (26%), Positives = 81/175 (46%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++ +Y   G    A ++F++ + E     W  ++  +  N    E V L+  +++   
Sbjct: 80  TKLVSLYGFFGYTKDARLVFDQ-IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGF 138

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              D I  +  + ACT L DL   + +H  ++K       D V+ T ++D Y KC +I++
Sbjct: 139 RY-DDIVFSKALKACTELQDLDNGKKIHCQLVKVP---SFDNVVLTGLLDMYAKCGEIKS 194

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F  I+  N   W +MI+GY  N     G+ LF  M   +V  +  T   L+
Sbjct: 195 AHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249


>ref|XP_006483071.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 597

 Score =  136 bits (343), Expect = 4e-30
 Identities = 72/202 (35%), Positives = 119/202 (58%)
 Frame = +1

Query: 7   QAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWN 186
           Q GNL+MG+                   +++DMY+KC  I  A  IFE    E+ +++WN
Sbjct: 247 QLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETT-SEKDVIAWN 304

Query: 187 SLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFIIK 366
           S+I+G+SQNG  Y ++ LF +M  D +  PD++T+ +V+ AC SL  +Q+  S+H +  K
Sbjct: 305 SIISGYSQNGPAYASLELFHQMRLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 364

Query: 367 KGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGV 546
           +GL L S+V +GT++++ Y KC D ++A ++F  + + NT TW+AMI GY +       +
Sbjct: 365 QGL-LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 423

Query: 547 QLFLEMLLGDVPPDSITMVILL 612
            LF +ML  +V P+ +    +L
Sbjct: 424 ALFSDMLNEEVQPNEVIFTTIL 445



 Score =  110 bits (274), Expect = 4e-22
 Identities = 60/175 (34%), Positives = 103/175 (58%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KC +I  +  +F+E L ++++VSW S+IAG+ QN    E + LF RM R+  
Sbjct: 72  TGLVDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGF 129

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              + IT+ ++V AC  L  L   + +H +I+K G+ ++S +V  T+++D Y KC +I  
Sbjct: 130 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRD 187

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F  +   +  +W AMI GYT + Y    ++LF +    D  P+ +T+  +L
Sbjct: 188 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 242



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 39/126 (30%), Positives = 60/126 (47%)
 Frame = +1

Query: 223 YEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLG 402
           Y+ +  F + +R      D+   + V+ AC  L D+     +H  I+K G     D  + 
Sbjct: 15  YKDIVEFYKCMRKRLKEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVL 71

Query: 403 TSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVP 582
           T +VD Y KC DI ++  +F      N  +W +MI+GY  N  A  G+ LF  M  G V 
Sbjct: 72  TGLVDMYAKCRDIGSSRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVE 131

Query: 583 PDSITM 600
            + IT+
Sbjct: 132 GNQITL 137


>ref|XP_006483070.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 709

 Score =  136 bits (343), Expect = 4e-30
 Identities = 72/202 (35%), Positives = 119/202 (58%)
 Frame = +1

Query: 7   QAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWN 186
           Q GNL+MG+                   +++DMY+KC  I  A  IFE    E+ +++WN
Sbjct: 359 QLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETT-SEKDVIAWN 416

Query: 187 SLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFIIK 366
           S+I+G+SQNG  Y ++ LF +M  D +  PD++T+ +V+ AC SL  +Q+  S+H +  K
Sbjct: 417 SIISGYSQNGPAYASLELFHQMRLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 476

Query: 367 KGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGV 546
           +GL L S+V +GT++++ Y KC D ++A ++F  + + NT TW+AMI GY +       +
Sbjct: 477 QGL-LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 535

Query: 547 QLFLEMLLGDVPPDSITMVILL 612
            LF +ML  +V P+ +    +L
Sbjct: 536 ALFSDMLNEEVQPNEVIFTTIL 557



 Score =  110 bits (274), Expect = 4e-22
 Identities = 60/175 (34%), Positives = 103/175 (58%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KC +I  +  +F+E L ++++VSW S+IAG+ QN    E + LF RM R+  
Sbjct: 184 TGLVDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGF 241

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              + IT+ ++V AC  L  L   + +H +I+K G+ ++S +V  T+++D Y KC +I  
Sbjct: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRD 299

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F  +   +  +W AMI GYT + Y    ++LF +    D  P+ +T+  +L
Sbjct: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 48/171 (28%), Positives = 78/171 (45%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++ MY   G +  A  +F+  +      S+  +I  +  N   Y+ +  F + +R   
Sbjct: 84  TKLVSMYGSFGHVKYARSVFDS-MPNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRL 141

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              D+   + V+ AC  L D+     +H  I+K G     D  + T +VD Y KC DI +
Sbjct: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGS 198

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITM 600
           +  +F      N  +W +MI+GY  N  A  G+ LF  M  G V  + IT+
Sbjct: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249


>ref|XP_006438781.1| hypothetical protein CICLE_v10033606mg [Citrus clementina]
           gi|557540977|gb|ESR52021.1| hypothetical protein
           CICLE_v10033606mg [Citrus clementina]
          Length = 716

 Score =  136 bits (343), Expect = 4e-30
 Identities = 72/202 (35%), Positives = 119/202 (58%)
 Frame = +1

Query: 7   QAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWN 186
           Q GNL+MG+                   +++DMY+KC  I  A  IFE    E+ +++WN
Sbjct: 359 QLGNLNMGRMVHSLGIRLGLEDYTVIN-ALVDMYAKCHVIADARYIFETT-SEKDVIAWN 416

Query: 187 SLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFIIK 366
           S+I+G+SQNG  Y ++ LF +M  D +  PD++T+ +V+ AC SL  +Q+  S+H +  K
Sbjct: 417 SIISGYSQNGPAYASLELFHQMRLDDNVSPDAVTLVSVISACASLGAVQVGSSLHAYSTK 476

Query: 367 KGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGV 546
           +GL L S+V +GT++++ Y KC D ++A ++F  + + NT TW+AMI GY +       +
Sbjct: 477 QGL-LSSNVYVGTALLNFYAKCGDAQSARMVFDAMREKNTVTWSAMIGGYGMQGDGGGSL 535

Query: 547 QLFLEMLLGDVPPDSITMVILL 612
            LF +ML  +V P+ +    +L
Sbjct: 536 ALFSDMLNEEVQPNEVIFTTIL 557



 Score =  110 bits (274), Expect = 4e-22
 Identities = 60/175 (34%), Positives = 103/175 (58%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KC +I  +  +F+E L ++++VSW S+IAG+ QN    E + LF RM R+  
Sbjct: 184 TGLVDMYAKCRDIGSSRQVFDETL-DKNVVSWTSMIAGYVQNDCAQEGLVLFNRM-REGF 241

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              + IT+ ++V AC  L  L   + +H +I+K G+ ++S +V  T+++D Y KC +I  
Sbjct: 242 VEGNQITLGSLVTACAKLRALHQGKWLHGYILKIGIEINSHLV--TALLDMYVKCGNIRD 299

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  +F  +   +  +W AMI GYT + Y    ++LF +    D  P+ +T+  +L
Sbjct: 300 ARSVFDELCSIDLVSWTAMIVGYTQSGYPDKALKLFTDKKWADFFPNHVTIASVL 354



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 48/171 (28%), Positives = 78/171 (45%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++ MY   G +  A  +F+  +      S+  +I  +  N   Y+ +  F + +R   
Sbjct: 84  TKLVSMYGSFGHVKYARSVFDS-MPNPDFYSFQVMIRWYFLNDL-YKDIVEFYKCMRKRL 141

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              D+   + V+ AC  L D+     +H  I+K G     D  + T +VD Y KC DI +
Sbjct: 142 KEHDNFVFSKVLKACCELRDIDEGMKVHCEIVKVG---GPDSFVLTGLVDMYAKCRDIGS 198

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITM 600
           +  +F      N  +W +MI+GY  N  A  G+ LF  M  G V  + IT+
Sbjct: 199 SRQVFDETLDKNVVSWTSMIAGYVQNDCAQEGLVLFNRMREGFVEGNQITL 249


>ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
           mitochondrial [Vitis vinifera]
           gi|147818711|emb|CAN65040.1| hypothetical protein
           VITISV_009460 [Vitis vinifera]
          Length = 700

 Score =  135 bits (341), Expect = 7e-30
 Identities = 73/204 (35%), Positives = 120/204 (58%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C Q G+L+MG+S                  +++DMY+KC  I  A  +FE    ++ +++
Sbjct: 349 CAQTGSLNMGRSVHCLGIKLGSEDATFEN-ALVDMYAKCHMIGDARYVFETVF-DKDVIA 406

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WNS+I+G++QNGY YEA+ LF +M R  S  PD+IT+ +V+ AC S+   ++  S+H + 
Sbjct: 407 WNSIISGYTQNGYAYEALELFDQM-RSDSVYPDAITLVSVLSACASVGAYRVGSSLHGYA 465

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           IK GL L   V +GT++++ Y KC D E+A ++F  + + NT TW+AMI GY +      
Sbjct: 466 IKAGL-LSGSVYVGTALLNFYAKCGDAESARVIFDEMGEKNTITWSAMIGGYGIQGDCSR 524

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF +ML   + P+ +    +L
Sbjct: 525 SLELFGDMLKEKLEPNEVIFTTIL 548



 Score =  119 bits (297), Expect = 9e-25
 Identities = 72/204 (35%), Positives = 106/204 (51%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C + G L  GK                  T ++D+Y KCG+I  A+ +F+E L    LVS
Sbjct: 248 CTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDE-LSTIDLVS 306

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           W ++I G++Q GY  EA+ LF    R     P+++T ++V+ AC     L M RS+H   
Sbjct: 307 WTAMIVGYAQRGYPREALKLFTDE-RWKDLLPNTVTTSSVLSACAQTGSLNMGRSVHCLG 365

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           IK G     D     ++VD Y KC  I  A  +F  +   +   WN++ISGYT N YA+ 
Sbjct: 366 IKLG---SEDATFENALVDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYE 422

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF +M    V PD+IT+V +L
Sbjct: 423 ALELFDQMRSDSVYPDAITLVSVL 446



 Score =  106 bits (264), Expect = 6e-21
 Identities = 60/170 (35%), Positives = 98/170 (57%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++DMY+KC E++ +  +F+E L +R++V W S+I G+ QN    E + LF RM R+  
Sbjct: 176 TGLVDMYAKCREVEDSRRVFDEIL-DRNVVCWTSMIVGYVQNDCLKEGLVLFNRM-REGL 233

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              +  T+ ++V ACT L  L   + +H ++IK G  L+S +V  T ++D Y KC DI  
Sbjct: 234 VEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLV--TPLLDLYFKCGDIRD 291

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSIT 597
           A  +F  +S  +  +W AMI GY    Y    ++LF +    D+ P+++T
Sbjct: 292 AFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVT 341



 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 49/171 (28%), Positives = 80/171 (46%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T ++ +Y   G ++CA ++F+  ++   L SW  +I  +  N    E V  +   LR   
Sbjct: 75  TKLVSLYGSFGHVECARLMFDR-IRNPDLYSWKVMIRWYFLNDSYSEIVQFYNTRLRKCL 133

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
              D++  + V+ AC+ L +    R +H  I+K G     D  + T +VD Y KC ++E 
Sbjct: 134 NEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG---SPDSFVLTGLVDMYAKCREVED 190

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITM 600
           +  +F  I   N   W +MI GY  N     G+ LF  M  G V  +  T+
Sbjct: 191 SRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTL 241


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  135 bits (340), Expect = 1e-29
 Identities = 71/204 (34%), Positives = 116/204 (56%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           CG   +L  G+                 GT++  MY+KCG ++ A  +F+  + +R +VS
Sbjct: 130 CGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDR-MPKRDVVS 188

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WN++IAG+SQNG  YEA+ LF  M + +   P+S T+ +V+P C  L  L+  + +H + 
Sbjct: 189 WNAIIAGYSQNGQPYEALALFSEM-QVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYA 247

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           I+ G+  +SDV++   +V+ Y KC ++  A  LF  +   + A+WNA+I GY+LN   H 
Sbjct: 248 IRSGI--ESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            +  F  M +  + P+SITMV +L
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVL 329



 Score =  124 bits (312), Expect = 2e-26
 Identities = 63/173 (36%), Positives = 106/173 (61%)
 Frame = +1

Query: 94  VIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTG 273
           +++MY+KCG ++ A  +FE  +  R + SWN++I G+S N   +EA+  F RM +     
Sbjct: 262 LVNMYAKCGNVNTAHKLFER-MPIRDVASWNAIIGGYSLNSQHHEALAFFNRM-QVRGIK 319

Query: 274 PDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAAS 453
           P+SIT+ +V+PAC  L  L+  + +H + I+ G   +S+ V+G ++V+ Y KC ++ +A 
Sbjct: 320 PNSITMVSVLPACAHLFALEQGQQIHGYAIRSGF--ESNDVVGNALVNMYAKCGNVNSAY 377

Query: 454 LLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
            LF  + K N   WNA+ISGY+ + + H  + LF+EM    + PDS  +V +L
Sbjct: 378 KLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVL 430



 Score =  115 bits (289), Expect = 8e-24
 Identities = 56/176 (31%), Positives = 104/176 (59%)
 Frame = +1

Query: 85  GTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDS 264
           G ++++MY+KCG ++ A+ +FE  + ++++V+WN++I+G+SQ+G+ +EA+ LF  M +  
Sbjct: 360 GNALVNMYAKCGNVNSAYKLFER-MPKKNVVAWNAIISGYSQHGHPHEALALFIEM-QAQ 417

Query: 265 STGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIE 444
              PDS  + +V+PAC     L+  + +H + I+ G   +S+VV+GT +VD Y KC ++ 
Sbjct: 418 GIKPDSFAIVSVLPACAHFLALEQGKQIHGYTIRSGF--ESNVVVGTGLVDIYAKCGNVN 475

Query: 445 AASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
            A  LF  + + +  +W  MI  Y ++ +    + LF +M       D I    +L
Sbjct: 476 TAQKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAIL 531



 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 51/146 (34%), Positives = 86/146 (58%)
 Frame = +1

Query: 175 VSWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHT 354
           V W   I G+ +NG+  +A+ L+ +M R +   PD +   +V+ AC S +DLQ  R +H 
Sbjct: 86  VVWKETIIGYVKNGFWNKALRLYYQMQR-TGINPDKLVFLSVIKACGSQSDLQAGRKVHE 144

Query: 355 FIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYA 534
            II +G   +SDV++GT++   Y KC  +E A  +F  + K +  +WNA+I+GY+ N   
Sbjct: 145 DIIARGF--ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQP 202

Query: 535 HHGVQLFLEMLLGDVPPDSITMVILL 612
           +  + LF EM +  + P+S T+V ++
Sbjct: 203 YEALALFSEMQVNGIKPNSSTLVSVM 228


>ref|XP_007203957.1| hypothetical protein PRUPE_ppa022872mg [Prunus persica]
           gi|462399488|gb|EMJ05156.1| hypothetical protein
           PRUPE_ppa022872mg [Prunus persica]
          Length = 714

 Score =  134 bits (337), Expect = 2e-29
 Identities = 74/204 (36%), Positives = 119/204 (58%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C Q+G+L++GK                   ++IDMY+KCG +D A  +F+  LQ+R ++S
Sbjct: 250 CAQSGSLELGKWVGSWIENRGLGSNLRLVNALIDMYAKCGALDTARSLFDG-LQQRDVIS 308

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WN +I G++   +  EA+ LF+ MLR S+  P+ +T   ++PAC+ L  L + + +H +I
Sbjct: 309 WNVMIGGYTHKSHYKEALALFRLMLR-SNADPNDVTFLGILPACSHLGALDLGKWIHAYI 367

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
            K    L ++  L TS++D Y KC +IEAA  +F  +   + A+WNAMISG  ++ +AH 
Sbjct: 368 DKNFQSL-TNTSLWTSLIDMYAKCGNIEAAKQVFNGMEAKSLASWNAMISGLAMHGHAHT 426

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF +M      PD IT V +L
Sbjct: 427 ALELFSKMADEGFKPDEITFVGVL 450



 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 57/181 (31%), Positives = 103/181 (56%), Gaps = 6/181 (3%)
 Frame = +1

Query: 88  TSVIDMYSK------CGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQR 249
           TS+I+MY++       G +D A  +F+E +  R +VSWN++I+G++Q+G   EA+ LF  
Sbjct: 172 TSLINMYAQNVLSEMWGCMDDARYLFDE-IPGRDVVSWNAMISGYAQSGRFEEALALFSE 230

Query: 250 MLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCK 429
           M R ++  P+  T+  V+ AC     L++ + + ++I  +G  L S++ L  +++D Y K
Sbjct: 231 M-RKANVSPNESTMVVVLSACAQSGSLELGKWVGSWIENRG--LGSNLRLVNALIDMYAK 287

Query: 430 CSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVIL 609
           C  ++ A  LF  + + +  +WN MI GYT   +    + LF  ML  +  P+ +T + +
Sbjct: 288 CGALDTARSLFDGLQQRDVISWNVMIGGYTHKSHYKEALALFRLMLRSNADPNDVTFLGI 347

Query: 610 L 612
           L
Sbjct: 348 L 348



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
 Frame = +1

Query: 109 SKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSIT 288
           S  G++  A ++F+  ++  + + WN++I GFS +    +AV  +  ML  S   P+S T
Sbjct: 78  SPFGDLSYALLVFQS-IENPNQIIWNTIIRGFSLSSKSIQAVEFYVLMLL-SGVEPNSYT 135

Query: 289 VANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCK--------CSDIE 444
              ++ +C   A     + +H  ++K GL  DSD  + TS+++ Y +        C D  
Sbjct: 136 FPFLLKSCAKFAASHEGKQIHGHVLKLGL--DSDAFVHTSLINMYAQNVLSEMWGCMD-- 191

Query: 445 AASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
            A  LF  I   +  +WNAMISGY  +      + LF EM   +V P+  TMV++L
Sbjct: 192 DARYLFDEIPGRDVVSWNAMISGYAQSGRFEEALALFSEMRKANVSPNESTMVVVL 247



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 8/212 (3%)
 Frame = +1

Query: 1   CGQAGNLDMGK-SXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLV 177
           C   G LD+GK                   TS+IDMY+KCG I+ A  +F   ++ +SL 
Sbjct: 351 CSHLGALDLGKWIHAYIDKNFQSLTNTSLWTSLIDMYAKCGNIEAAKQVFNG-MEAKSLA 409

Query: 178 SWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACT--SLADL--QMIRS 345
           SWN++I+G + +G+ + A+ LF +M  D    PD IT   V+ AC    L DL  Q   S
Sbjct: 410 SWNAMISGLAMHGHAHTALELFSKMA-DEGFKPDEITFVGVLSACNHGGLVDLGRQYFSS 468

Query: 346 MHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDI-EAASLLFTCISKPNTATWNAMISGYTL 522
           M T        + + +     M+D   +     EA +L+ +   KP+ A W +++    +
Sbjct: 469 MIT-----DYHISAQLQHYGCMIDLLGRAGLFDEAEALMSSMEMKPDGAVWGSLLGACRI 523

Query: 523 NHYAHHGVQL--FLEMLLGDVPPDSITMVILL 612
               H  V+L   +   L ++ P++    +LL
Sbjct: 524 ----HRRVELGELVAKHLFELEPENAGAYVLL 551


>ref|XP_006432168.1| hypothetical protein CICLE_v10000448mg [Citrus clementina]
           gi|568821173|ref|XP_006465064.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Citrus sinensis]
           gi|557534290|gb|ESR45408.1| hypothetical protein
           CICLE_v10000448mg [Citrus clementina]
          Length = 705

 Score =  133 bits (334), Expect = 5e-29
 Identities = 72/179 (40%), Positives = 110/179 (61%), Gaps = 4/179 (2%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           TS++  Y+K   +  A ++F + L ER++VSWN+LIAG++QNG + EA+ LF R+L+  S
Sbjct: 323 TSMVSGYAKASSVKSARLMFTKML-ERNVVSWNALIAGYTQNGENEEALGLF-RLLKRES 380

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRL----DSDVVLGTSMVDAYCKCS 435
             P   T  N++ AC +LADLQ+ R  HT ++K GLR     +SD+ +G S++D Y KC 
Sbjct: 381 VCPTHYTFGNLLNACANLADLQLGRQAHTHVVKHGLRFLSGEESDIFVGNSLIDMYMKCG 440

Query: 436 DIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
            +E    +F  + + +  +WNAMI G   N Y    + LF +MLL    PD +TM+ +L
Sbjct: 441 SVEEGCRIFETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLLCGEKPDHVTMIGVL 499



 Score =  111 bits (278), Expect = 1e-22
 Identities = 71/207 (34%), Positives = 110/207 (53%), Gaps = 31/207 (14%)
 Frame = +1

Query: 85  GTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDS 264
           G+++IDMY KCG + CA  +F+  ++ER++VSWNSLI  + QNG   +A+ +F RM+  S
Sbjct: 189 GSALIDMYGKCGRVSCARRVFDG-MRERNIVSWNSLITCYEQNGPASDALEVFVRMMA-S 246

Query: 265 STGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKC---- 432
              PD +T+A+VV AC SLA  +    +H  +++   +L +D+VLG ++VD Y KC    
Sbjct: 247 GIEPDEVTLASVVSACASLAAFKEGLQIHARLMRCE-KLRNDLVLGNALVDMYAKCGKLN 305

Query: 433 ---------------------------SDIEAASLLFTCISKPNTATWNAMISGYTLNHY 531
                                      S +++A L+FT + + N  +WNA+I+GYT N  
Sbjct: 306 EARCVFDRMPIRNVVSETSMVSGYAKASSVKSARLMFTKMLERNVVSWNALIAGYTQNGE 365

Query: 532 AHHGVQLFLEMLLGDVPPDSITMVILL 612
               + LF  +    V P   T   LL
Sbjct: 366 NEEALGLFRLLKRESVCPTHYTFGNLL 392



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 50/170 (29%), Positives = 89/170 (52%)
 Frame = +1

Query: 91  SVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSST 270
           S+I    K G ID A  +F   + ER   SWNS+++GF+Q+    EA+  F +M    + 
Sbjct: 90  SIITGLLKWGFIDDASRLFAS-MPERDQCSWNSMVSGFAQHDRFSEALGYFVKM-HSENF 147

Query: 271 GPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAA 450
             +  +  + + AC    D +M   +H  + K   R  SDV +G++++D Y KC  +  A
Sbjct: 148 ALNEYSFGSALSACAGSVDFKMGTQVHALLSKS--RYSSDVYMGSALIDMYGKCGRVSCA 205

Query: 451 SLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITM 600
             +F  + + N  +WN++I+ Y  N  A   +++F+ M+   + PD +T+
Sbjct: 206 RRVFDGMRERNIVSWNSLITCYEQNGPASDALEVFVRMMASGIEPDEVTL 255



 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 58/181 (32%), Positives = 94/181 (51%), Gaps = 5/181 (2%)
 Frame = +1

Query: 85  GTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDS 264
           G S+IDMY KCG ++    IF E + ER  VSWN++I G +QNGY  EA+ LF++ML   
Sbjct: 429 GNSLIDMYMKCGSVEEGCRIF-ETMVERDWVSWNAMIVGCAQNGYGTEALGLFKKMLL-C 486

Query: 265 STGPDSITVANVVPACTSLADLQMIRSMHTFIIKK-GLRLDSDVVLGTSMVDAYCK--CS 435
              PD +T+  V+ AC+    ++  R   + + K+ GL    D    T MVD   +  C 
Sbjct: 487 GEKPDHVTMIGVLCACSHAGLVEEGRKYFSSMSKEHGLAPLKDHY--TCMVDLLGRAGCL 544

Query: 436 DIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQL--FLEMLLGDVPPDSITMVIL 609
           D EA +L+     +P+   W ++++   +    H  + L  ++   L ++ P +    +L
Sbjct: 545 D-EAKTLIEAMPMQPDAVIWGSLLAACKV----HRNIMLGEYVAKKLLEIEPSNSGPYVL 599

Query: 610 L 612
           L
Sbjct: 600 L 600


>ref|XP_006417732.1| hypothetical protein EUTSA_v10006910mg [Eutrema salsugineum]
           gi|557095503|gb|ESQ36085.1| hypothetical protein
           EUTSA_v10006910mg [Eutrema salsugineum]
          Length = 740

 Score =  133 bits (334), Expect = 5e-29
 Identities = 72/204 (35%), Positives = 115/204 (56%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C Q+G++++G+                   ++ID+YSKCGE+  A  +FE  +  + +VS
Sbjct: 275 CAQSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGEVATACGLFEG-MSYKDVVS 333

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WN+LI G++      EA+ LFQ MLR S+  P+ +T+ +++PAC  L  + + R +H +I
Sbjct: 334 WNTLIGGYTHMSLYKEALLLFQEMLR-SNESPNDVTMLSILPACAHLGAIDIGRWIHVYI 392

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
            KK   + +   L TS++D Y KC DIEAA  +F  +   + ++WNAMI G+ ++  A+ 
Sbjct: 393 AKKLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHRSLSSWNAMIFGFAMHGRANA 452

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
              LF  M    + PD IT V LL
Sbjct: 453 AFDLFSRMRKNGIEPDGITFVGLL 476



 Score =  101 bits (251), Expect = 2e-19
 Identities = 55/175 (31%), Positives = 99/175 (56%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T++I  Y+  G    A  +F+E + ++ +VSWN++I+G+ + GY  EA  LF+ M++ S+
Sbjct: 203 TALITGYASRGYTQSAQKMFDE-IPDKDVVSWNAMISGYVETGYYKEAFELFEDMMK-SN 260

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
             PD  T+  V+ AC     +++ R +H++I   G    S++ +  +++D Y KC ++  
Sbjct: 261 VSPDESTMVTVLSACAQSGSIELGRQVHSWIDDHG--FGSNLKIVNALIDLYSKCGEVAT 318

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  LF  +S  +  +WN +I GYT        + LF EML  +  P+ +TM+ +L
Sbjct: 319 ACGLFEGMSYKDVVSWNTLIGGYTHMSLYKEALLLFQEMLRSNESPNDVTMLSIL 373



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 37/85 (43%), Positives = 51/85 (60%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           TS+IDMY+KCG+I+ A  +F   L  RSL SWN++I GF+ +G    A  LF RM R + 
Sbjct: 407 TSLIDMYAKCGDIEAAHQVFNSMLH-RSLSSWNAMIFGFAMHGRANAAFDLFSRM-RKNG 464

Query: 268 TGPDSITVANVVPACTSLADLQMIR 342
             PD IT   ++ AC+    L + R
Sbjct: 465 IEPDGITFVGLLSACSHSGMLDLGR 489



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
 Frame = +1

Query: 151 EELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTG--PDSITVANVVPACTSLA 324
           E +QE + + WN+++ G + +     ++ L+  M+   S G  P+S T   ++ +C    
Sbjct: 91  ETIQEPNQLIWNTMLRGHALSSDPVSSLKLYVSMI---SLGLLPNSYTFPFLLKSCAKSN 147

Query: 325 DLQMIRSMHTFIIKKGLRLD-----------------------------SDVVLGTSMVD 417
            L+  + +H  ++K G  LD                              DVV  T+++ 
Sbjct: 148 TLREGQQIHGHVLKFGYGLDLYVHTSLISMYAQNGRLEDAQQVFDRSSHRDVVSYTALIT 207

Query: 418 AYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSIT 597
            Y      ++A  +F  I   +  +WNAMISGY    Y     +LF +M+  +V PD  T
Sbjct: 208 GYASRGYTQSAQKMFDEIPDKDVVSWNAMISGYVETGYYKEAFELFEDMMKSNVSPDEST 267

Query: 598 MVILL 612
           MV +L
Sbjct: 268 MVTVL 272


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score =  132 bits (333), Expect = 6e-29
 Identities = 72/204 (35%), Positives = 114/204 (55%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C Q+G++++G+                   ++ID+YSKCGE++ A  +FE  L  + ++S
Sbjct: 276 CAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER-LPYKDVIS 334

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WN+LI G++      EA+ LFQ MLR   T P+ +T+ +++PAC  L  + + R +H +I
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
            K+   + +   L TS++D Y KC DIEAA  +F  I   + ++WNAMI G+ ++  A  
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
              LF  M    + PD IT V LL
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLL 477



 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 55/175 (31%), Positives = 100/175 (57%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T++I  Y+  G I+ A  +F+E +  + +VSWN++I+G+++ G   EA+ LF+ M++ ++
Sbjct: 204 TALIKGYASRGYIENAQKLFDE-IPVKDVVSWNAMISGYAETGNYKEALELFKDMMK-TN 261

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
             PD  T+  VV AC     +++ R +H +I   G    S++ +  +++D Y KC ++E 
Sbjct: 262 VRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG--FGSNLKIVNALIDLYSKCGELET 319

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  LF  +   +  +WN +I GYT  +     + LF EML     P+ +TM+ +L
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
 Frame = +1

Query: 157 LQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSSTG--PDSITVANVVPACTSLADL 330
           +QE +L+ WN++  G + +     A+ L+  M+   S G  P+S T   V+ +C      
Sbjct: 94  IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMI---SLGLLPNSYTFPFVLKSCAKSKAF 150

Query: 331 QMIRSMHTFIIKKGLRLD-----------------------------SDVVLGTSMVDAY 423
           +  + +H  ++K G  LD                              DVV  T+++  Y
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210

Query: 424 CKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMV 603
                IE A  LF  I   +  +WNAMISGY         ++LF +M+  +V PD  TMV
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270

Query: 604 ILL 612
            ++
Sbjct: 271 TVV 273


>ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355491679|gb|AES72882.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 705

 Score =  132 bits (333), Expect = 6e-29
 Identities = 71/179 (39%), Positives = 109/179 (60%), Gaps = 4/179 (2%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           TS++  Y+K   +  A ++F   + ER++VSWN+LIAG++QNG + EAV LF  +L+  S
Sbjct: 323 TSMVSGYAKASSVKAARLMFSN-MMERNVVSWNALIAGYTQNGENEEAVRLFL-LLKRES 380

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRL----DSDVVLGTSMVDAYCKCS 435
             P   T  N++ AC +LADL++ R  HT I+K G       DSD+ +G S++D Y KC 
Sbjct: 381 IWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCG 440

Query: 436 DIEAASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
            +E   L+F  + + +  +WNAMI GY  N Y    +++F EML+    PD +TM+ +L
Sbjct: 441 LVEDGRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVL 499



 Score =  102 bits (255), Expect = 7e-20
 Identities = 67/207 (32%), Positives = 108/207 (52%), Gaps = 31/207 (14%)
 Frame = +1

Query: 85  GTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDS 264
           G++++DMYSKC  +  A   F++ +  R++VSWNSLI  + QNG   +A+ +F RM+ + 
Sbjct: 189 GSALVDMYSKCRVVASAQRAFDD-MDVRNIVSWNSLITCYEQNGPAGKALEVFVRMM-NC 246

Query: 265 STGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKC---- 432
              PD IT+A+V  AC SL+ ++    +H  ++K   +  +D+VLG ++VD Y KC    
Sbjct: 247 GIEPDEITLASVASACASLSAIREGLQIHARVMKHD-KYRNDLVLGNALVDMYAKCRRVN 305

Query: 433 ---------------------------SDIEAASLLFTCISKPNTATWNAMISGYTLNHY 531
                                      S ++AA L+F+ + + N  +WNA+I+GYT N  
Sbjct: 306 EARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGE 365

Query: 532 AHHGVQLFLEMLLGDVPPDSITMVILL 612
               V+LFL +    + P   T   LL
Sbjct: 366 NEEAVRLFLLLKRESIWPTHYTFGNLL 392



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 48/170 (28%), Positives = 86/170 (50%)
 Frame = +1

Query: 91  SVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSST 270
           +V+   +K G +D A  +F+  + ER   SWN++++GF+Q    +E    F   +     
Sbjct: 90  AVLGALTKFGALDEALNLFKC-MPERDQCSWNAMVSGFAQRDR-FEEALRFVVDMHSEDF 147

Query: 271 GPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEAA 450
             +  +  + + AC  L DL +   +H  I K   R   DV +G+++VD Y KC  + +A
Sbjct: 148 VLNEYSFGSALSACAGLMDLSIGVQIHGLIAKS--RYSLDVYMGSALVDMYSKCRVVASA 205

Query: 451 SLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITM 600
              F  +   N  +WN++I+ Y  N  A   +++F+ M+   + PD IT+
Sbjct: 206 QRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITL 255



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
 Frame = +1

Query: 85  GTSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDS 264
           G S+IDMY KCG ++   ++FE  L ER  VSWN++I G++QNGY  EA+ +F+ ML  S
Sbjct: 429 GNSLIDMYMKCGLVEDGRLVFERML-ERDNVSWNAMIVGYAQNGYGTEALEIFREML-VS 486

Query: 265 STGPDSITVANVVPACTSLADLQMIRS-MHTFIIKKGLRLDSDVVLGTSMVDAYCK--CS 435
              PD +T+  V+ AC+    ++  R    +  I+ GL    D    T MVD   +  C 
Sbjct: 487 GERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHY--TCMVDLLGRAGCL 544

Query: 436 DIEAASLLFTCISKPNTATWNAMIS 510
           D EA +L+ T   +P+   W ++++
Sbjct: 545 D-EANNLIQTMPMEPDAVVWGSLLA 568


>gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  132 bits (333), Expect = 6e-29
 Identities = 72/204 (35%), Positives = 115/204 (56%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C Q+ ++++G+                   ++ID+YSKCG+++ A  +FE  L  + +VS
Sbjct: 208 CAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEG-LSCKDVVS 266

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WN+LI G++      EA+ LFQ MLR S   P+ +T+ +++PAC  L  + + R +H +I
Sbjct: 267 WNTLIGGYTHMNLYKEALLLFQEMLR-SGESPNDVTIVSILPACAHLGAIDIGRWIHVYI 325

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
            KK   + +   L TS++D Y KC DIEAA  +F  +   + ++WNAMI G+ ++  A+ 
Sbjct: 326 DKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANA 385

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
           G  LF  M    + PD IT V LL
Sbjct: 386 GFDLFSRMRKNGIEPDDITFVGLL 409



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 55/175 (31%), Positives = 100/175 (57%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           T++I  Y+  G I  A  +F+E +  + +VSWN++I+G+++ G   EA+ LF+ M++ ++
Sbjct: 136 TALITGYASSGNIRSAQEMFDE-IPVKDVVSWNAMISGYAETGSYKEALELFKEMMK-TN 193

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDIEA 447
             PD  T+  V+ AC     +++ R +H++I   G    S++ +  +++D Y KC  +E 
Sbjct: 194 VRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHG--FGSNLKIVNALIDLYSKCGQVET 251

Query: 448 ASLLFTCISKPNTATWNAMISGYTLNHYAHHGVQLFLEMLLGDVPPDSITMVILL 612
           A  LF  +S  +  +WN +I GYT  +     + LF EML     P+ +T+V +L
Sbjct: 252 ACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSIL 306



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 8/148 (5%)
 Frame = +1

Query: 88  TSVIDMYSKCGEIDCAWVIFEEELQERSLVSWNSLIAGFSQNGYDYEAVFLFQRMLRDSS 267
           TS+IDMY+KCG+I+ A  +F   L  +SL SWN++I GF+ +G       LF RM R + 
Sbjct: 340 TSLIDMYAKCGDIEAAHQVFNSMLH-KSLSSWNAMIFGFAMHGRANAGFDLFSRM-RKNG 397

Query: 268 TGPDSITVANVVPACTSLADLQMIRSMHTFIIKKGLRLDSDVVLGTSMVDAYCKCSDI-- 441
             PD IT   ++ AC+    L + R  H F   K +  D D+   T  ++ Y    D+  
Sbjct: 398 IEPDDITFVGLLSACSHSGKLDLGR--HIF---KSMTQDYDI---TPKLEHYGCMIDLLG 449

Query: 442 ------EAASLLFTCISKPNTATWNAMI 507
                 EA  ++ T   +P+   W +++
Sbjct: 450 HSGLFKEAKEMIKTMPMEPDGVIWCSLL 477


>gb|EXC27881.1| hypothetical protein L484_009204 [Morus notabilis]
          Length = 619

 Score =  132 bits (332), Expect = 8e-29
 Identities = 73/204 (35%), Positives = 116/204 (56%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C     L+ G++                  S+I MY++CGE+ CA  +F+E +  R L S
Sbjct: 83  CANLSTLNHGRTAHSSVFKIGLDGDEHVSNSLITMYARCGELGCAREVFDE-ITLRGLSS 141

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WNS+I+G+S+ GY  EAV LF  M RD    P  +T+ +V+ AC  L DL + R +  F+
Sbjct: 142 WNSMISGYSKMGYAREAVELFGEM-RDDGIAPVEMTLVSVLGACGDLGDLSLGRWVEEFV 200

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           ++K L ++S   LG++++  Y KC D+ +A  +F  ++K +  TWNAMISGY  N  +  
Sbjct: 201 VEKSLEVNS--YLGSALIGMYGKCGDLCSARRVFDSMTKKDLVTWNAMISGYAQNGLSDE 258

Query: 541 GVQLFLEMLLGDVPPDSITMVILL 612
            ++LF +M    + P+ IT+V +L
Sbjct: 259 AIRLFGDMKEAGINPNKITLVGVL 282



 Score =  110 bits (276), Expect = 3e-22
 Identities = 59/189 (31%), Positives = 104/189 (55%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           CG  G+L +G+                 G+++I MY KCG++  A  +F+  + ++ LV+
Sbjct: 184 CGDLGDLSLGRWVEEFVVEKSLEVNSYLGSALIGMYGKCGDLCSARRVFDS-MTKKDLVT 242

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSSTGPDSITVANVVPACTSLADLQMIRSMHTFI 360
           WN++I+G++QNG   EA+ LF  M +++   P+ IT+  V+ AC  +  L M + +  F 
Sbjct: 243 WNAMISGYAQNGLSDEAIRLFGDM-KEAGINPNKITLVGVLSACAQVGALDMGKWVDNFA 301

Query: 361 IKKGLRLDSDVVLGTSMVDAYCKCSDIEAASLLFTCISKPNTATWNAMISGYTLNHYAHH 540
           ++ GL+   DV + T+++D Y KC  ++ A  +F  + + N  +WNAMIS    +  A  
Sbjct: 302 LESGLQ--HDVYVATALLDMYAKCGSLDDALRVFEEMPQKNEVSWNAMISALAFHGRAIE 359

Query: 541 GVQLFLEML 567
            + LF  M+
Sbjct: 360 AISLFNRMI 368



 Score = 72.8 bits (177), Expect = 8e-11
 Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
 Frame = +1

Query: 1   CGQAGNLDMGKSXXXXXXXXXXXXXXXXGTSVIDMYSKCGEIDCAWVIFEEELQERSLVS 180
           C Q G LDMGK                  T+++DMY+KCG +D A  +FEE + +++ VS
Sbjct: 285 CAQVGALDMGKWVDNFALESGLQHDVYVATALLDMYAKCGSLDDALRVFEE-MPQKNEVS 343

Query: 181 WNSLIAGFSQNGYDYEAVFLFQRMLRDSS--TGPDSITVANVVPACTSLADLQMIRSMHT 354
           WN++I+  + +G   EA+ LF RM+ +      P+ IT   V+ AC           +H 
Sbjct: 344 WNAMISALAFHGRAIEAISLFNRMIEEGGALARPNDITFVGVLSAC-----------VHA 392

Query: 355 FIIKKGLRLDSDVVLG----------TSMVDAYCKCSDI-EAASLLFTCISKPNTATWNA 501
            ++ +G RL + V             + MVD   +   + EA + +     KP+  +  A
Sbjct: 393 GLVDEGRRLFNSVSSSFGLAPKIEHYSCMVDLLARAGHVHEAWNFIEKMPEKPDEVSLGA 452

Query: 502 MIS 510
           +++
Sbjct: 453 LLA 455