BLASTX nr result
ID: Sinomenium22_contig00029302
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00029302
(273 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001175316.1| Os07g0649700 [Oryza sativa Japonica Group] g... 65 1e-08
gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indi... 65 1e-08
gb|AAM22009.1|AC093178_4 Putative reverse transcriptase [Oryza s... 63 4e-08
ref|XP_002442592.1| hypothetical protein SORBIDRAFT_08g022600 [S... 63 4e-08
ref|XP_002449887.1| hypothetical protein SORBIDRAFT_05g024920 [S... 63 4e-08
gb|AAM94293.1| putative reverse transcriptase [Sorghum bicolor] 63 4e-08
emb|CAE03649.2| OSJNBa0060N03.14 [Oryza sativa Japonica Group] 62 8e-08
gb|AAX96569.1| retrotransposon protein, putative, unclassified [... 62 1e-07
gb|EEE50714.1| hypothetical protein OsJ_30995 [Oryza sativa Japo... 61 1e-07
ref|XP_007010390.1| Retrotransposon, unclassified-like protein [... 60 2e-07
gb|EEE69615.1| hypothetical protein OsJ_29192 [Oryza sativa Japo... 58 1e-06
gb|EEE56186.1| hypothetical protein OsJ_05139 [Oryza sativa Japo... 57 2e-06
ref|XP_007023814.1| Uncharacterized protein TCM_028053 [Theobrom... 57 3e-06
ref|XP_007008704.1| Uncharacterized protein TCM_042330 [Theobrom... 57 3e-06
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 57 3e-06
ref|XP_006663655.1| PREDICTED: uncharacterized protein LOC102716... 57 3e-06
ref|XP_007046402.1| Uncharacterized protein TCM_011921 [Theobrom... 57 3e-06
ref|XP_002456902.1| hypothetical protein SORBIDRAFT_03g045105 [S... 57 3e-06
ref|XP_007026458.1| Uncharacterized protein TCM_021522 [Theobrom... 56 5e-06
ref|XP_007031313.1| Uncharacterized protein TCM_016763 [Theobrom... 56 5e-06
>ref|NP_001175316.1| Os07g0649700 [Oryza sativa Japonica Group]
gi|255678022|dbj|BAH94044.1| Os07g0649700 [Oryza sativa
Japonica Group]
Length = 1509
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +3
Query: 69 RKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMP 248
R EN +TY G PL L R T ++P+++++ KK+A WK KL P GR L+K VL+++P
Sbjct: 1152 RVENFPITYLGLPLSLRRPTKAEVQPILDRLSKKVAGWKPKLLSPDGRLRLIKSVLTALP 1211
Query: 249 IHLMSVM 269
+H MSV+
Sbjct: 1212 VHFMSVL 1218
>gb|EEC77962.1| hypothetical protein OsI_17322 [Oryza sativa Indica Group]
Length = 1104
Score = 64.7 bits (156), Expect = 1e-08
Identities = 31/67 (46%), Positives = 46/67 (68%)
Frame = +3
Query: 69 RKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMP 248
R EN +TY G PL L R T ++P+++++ KK+A WK KL P GR L+K VL+++P
Sbjct: 747 RVENFPITYLGLPLSLRRPTKAEVQPILDRLSKKVAGWKPKLLSPDGRLRLIKSVLTALP 806
Query: 249 IHLMSVM 269
+H MSV+
Sbjct: 807 VHFMSVL 813
>gb|AAM22009.1|AC093178_4 Putative reverse transcriptase [Oryza sativa Japonica Group]
gi|31430826|gb|AAP52685.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1792
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/78 (41%), Positives = 51/78 (65%)
Frame = +3
Query: 36 ESLVC*ELRVLRKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRS 215
+ L+ E+ R E+L +TY G PL + T L+P+++++ KK+A WK KL P GR
Sbjct: 1501 QRLLVQEVLGCRMEDLPITYLGLPLSIRNPTKAELQPIMDRMAKKVAGWKPKLLSPDGRL 1560
Query: 216 ILVKHVLSSMPIHLMSVM 269
L+K VL ++P+HL+SV+
Sbjct: 1561 CLIKSVLMAIPVHLLSVV 1578
>ref|XP_002442592.1| hypothetical protein SORBIDRAFT_08g022600 [Sorghum bicolor]
gi|241943285|gb|EES16430.1| hypothetical protein
SORBIDRAFT_08g022600 [Sorghum bicolor]
Length = 1192
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 72 KENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPI 251
K N +TY G PL LGRL L+ +V+K R ++A W+ +L P GR LV+ VLSSMP+
Sbjct: 897 KTNFPITYLGLPLSLGRLKVVHLQKIVDKSRSRLAAWQGRLMNPAGRRELVRSVLSSMPV 956
Query: 252 HLMSVM 269
+LM+ +
Sbjct: 957 YLMTTL 962
>ref|XP_002449887.1| hypothetical protein SORBIDRAFT_05g024920 [Sorghum bicolor]
gi|241935730|gb|EES08875.1| hypothetical protein
SORBIDRAFT_05g024920 [Sorghum bicolor]
Length = 1022
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 72 KENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPI 251
K N +TY G PL LGRL L+ +V+K R ++A W+ +L P GR LV+ VLSSMP+
Sbjct: 897 KTNFPITYLGLPLSLGRLKVVHLQKIVDKSRSRLAAWQGRLMNPAGRRELVRSVLSSMPV 956
Query: 252 HLMSVM 269
+LM+ +
Sbjct: 957 YLMTTL 962
>gb|AAM94293.1| putative reverse transcriptase [Sorghum bicolor]
Length = 1323
Score = 63.2 bits (152), Expect = 4e-08
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 72 KENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPI 251
K N +TY G PL LGRL L+ +V+K R ++A W+ +L P GR LV+ VLSSMP+
Sbjct: 897 KTNFPITYLGLPLSLGRLKVVHLQKIVDKSRSRLAAWQGRLMNPAGRRELVRSVLSSMPV 956
Query: 252 HLMSVM 269
+LM+ +
Sbjct: 957 YLMTTL 962
>emb|CAE03649.2| OSJNBa0060N03.14 [Oryza sativa Japonica Group]
Length = 1784
Score = 62.0 bits (149), Expect = 8e-08
Identities = 30/67 (44%), Positives = 45/67 (67%)
Frame = +3
Query: 69 RKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMP 248
R EN +TY G PL L R T ++P+++++ KK+A WK KL P GR L+K VL+++P
Sbjct: 1704 RVENFPITYLGLPLSLRRPTKAEVQPILDQLSKKVAGWKPKLLSPDGRLRLIKSVLTALP 1763
Query: 249 IHLMSVM 269
+H M V+
Sbjct: 1764 VHFMFVL 1770
>gb|AAX96569.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|77552668|gb|ABA95465.1|
retrotransposon protein, putative, LINE subclass [Oryza
sativa Japonica Group]
Length = 588
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +3
Query: 54 ELRVLRKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHV 233
E+ R E+ +TY G PL + + T ++P+++++ KKIA WK +L P GR L+K
Sbjct: 294 EILQCRVEHFPITYLGLPLAMRKPTKAEIQPILDRLAKKIAGWKPRLLSPDGRLCLIKST 353
Query: 234 LSSMPIHLMSVM 269
L ++P+HLMSV+
Sbjct: 354 LMALPVHLMSVL 365
>gb|EEE50714.1| hypothetical protein OsJ_30995 [Oryza sativa Japonica Group]
Length = 432
Score = 61.2 bits (147), Expect = 1e-07
Identities = 29/65 (44%), Positives = 45/65 (69%)
Frame = +3
Query: 75 ENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIH 254
E+L +TY G PL + T L+P+++++ KK+A WK KL P GR L+K VL ++P+H
Sbjct: 2 EDLPITYLGLPLSIRNPTKAELQPIMDRMAKKVAGWKPKLLSPDGRLCLIKSVLMAIPVH 61
Query: 255 LMSVM 269
L+SV+
Sbjct: 62 LLSVV 66
>ref|XP_007010390.1| Retrotransposon, unclassified-like protein [Theobroma cacao]
gi|508727303|gb|EOY19200.1| Retrotransposon,
unclassified-like protein [Theobroma cacao]
Length = 1368
Score = 60.5 bits (145), Expect = 2e-07
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 75 ENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIH 254
+ L +TY GAPL G + + L+ K+R++I W+ K+ PGGR L++ VLSSMPI+
Sbjct: 711 KTLPITYLGAPLFKGPKKVMLFDSLINKIRERITGWENKILSPGGRITLLRSVLSSMPIY 770
Query: 255 LMSVM 269
L+ V+
Sbjct: 771 LLQVL 775
>gb|EEE69615.1| hypothetical protein OsJ_29192 [Oryza sativa Japonica Group]
Length = 396
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +3
Query: 36 ESLVC*ELRVLRKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRS 215
+S++C R E +TY G PL L +LT Q ++PL+++ KK A WK K G R
Sbjct: 115 QSILC-----CRLEPFPITYLGLPLSLRKLTKQDVQPLLDRFSKKFAGWKPKFLSTGDRL 169
Query: 216 ILVKHVLSSMPIHLMSVM 269
L+K VL ++P+H +SV+
Sbjct: 170 TLIKSVLFALPVHYLSVL 187
>gb|EEE56186.1| hypothetical protein OsJ_05139 [Oryza sativa Japonica Group]
Length = 1394
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/72 (38%), Positives = 44/72 (61%)
Frame = +3
Query: 54 ELRVLRKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHV 233
EL + E + Y G PL + + T L+P+++K+ K+A WK KL P GR L+K V
Sbjct: 234 ELLPCKVEEFPIIYLGLPLSMRKPTKAELQPVLDKLASKVAGWKPKLLSPDGRLCLIKSV 293
Query: 234 LSSMPIHLMSVM 269
L ++P+H +SV+
Sbjct: 294 LMALPVHFLSVL 305
>ref|XP_007023814.1| Uncharacterized protein TCM_028053 [Theobroma cacao]
gi|508779180|gb|EOY26436.1| Uncharacterized protein
TCM_028053 [Theobroma cacao]
Length = 318
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +3
Query: 75 ENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIH 254
+ L V Y GAPL G + + + L+ K+R +I+ W+ K+ PGGR L+ VLSSMPI+
Sbjct: 209 KTLFVIYLGAPLFKGLIKILLFDSLITKIRDRISRWENKILSPGGRITLLWSVLSSMPIY 268
Query: 255 LMSVM 269
L+ ++
Sbjct: 269 LLQIL 273
>ref|XP_007008704.1| Uncharacterized protein TCM_042330 [Theobroma cacao]
gi|508725617|gb|EOY17514.1| Uncharacterized protein
TCM_042330 [Theobroma cacao]
Length = 2249
Score = 57.0 bits (136), Expect = 3e-06
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +3
Query: 81 LLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIHLM 260
LL+TY GAPL G + LV K+ ++I W+ K+ PGGR L++ VL+S+PI+L+
Sbjct: 1627 LLITYLGAPLYKGHKKVILFNDLVAKIEERITGWENKILSPGGRITLLRSVLASLPIYLL 1686
Query: 261 SVM 269
V+
Sbjct: 1687 QVL 1689
>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
lycopersicum]
Length = 1454
Score = 57.0 bits (136), Expect = 3e-06
Identities = 30/67 (44%), Positives = 40/67 (59%)
Frame = +3
Query: 72 KENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPI 251
++N + Y G PL +G +VEKV KKIA W K+ GG+ LVKHVL SMPI
Sbjct: 815 RKNSPINYLGCPLYVGGQRIIYYSEIVEKVIKKIAGWHLKILNFGGKVTLVKHVLQSMPI 874
Query: 252 HLMSVMN 272
H +S ++
Sbjct: 875 HTLSAIS 881
>ref|XP_006663655.1| PREDICTED: uncharacterized protein LOC102716637 [Oryza brachyantha]
Length = 1660
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/68 (39%), Positives = 43/68 (63%)
Frame = +3
Query: 69 RKENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMP 248
R + +TY G PL L +LT L+P +++ KK++ WK KL G R L+ VL ++P
Sbjct: 636 RIQEFPITYLGLPLSLRKLTKNDLQPTLDRFAKKVSGWKPKLLSTGDRLTLINSVLMALP 695
Query: 249 IHLMSVMN 272
+HL+SV++
Sbjct: 696 VHLLSVLD 703
>ref|XP_007046402.1| Uncharacterized protein TCM_011921 [Theobroma cacao]
gi|508710337|gb|EOY02234.1| Uncharacterized protein
TCM_011921 [Theobroma cacao]
Length = 926
Score = 56.6 bits (135), Expect = 3e-06
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +3
Query: 75 ENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIH 254
+ L VTY GAPL G + + L+ K+R +I+ W+ K+ PGGR L++ VLSS+P++
Sbjct: 303 KTLPVTYLGAPLHKGPKKVYLFDSLISKIRDRISGWENKILSPGGRITLLRSVLSSLPMY 362
Query: 255 LMSVM 269
L+ V+
Sbjct: 363 LLQVL 367
>ref|XP_002456902.1| hypothetical protein SORBIDRAFT_03g045105 [Sorghum bicolor]
gi|241928877|gb|EES02022.1| hypothetical protein
SORBIDRAFT_03g045105 [Sorghum bicolor]
Length = 273
Score = 56.6 bits (135), Expect = 3e-06
Identities = 29/61 (47%), Positives = 40/61 (65%)
Frame = +3
Query: 87 VTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIHLMSV 266
VTY G PL LGRL ++ V+K R K+A W+ KL GR LV+ V+S+MP++LM+
Sbjct: 6 VTYLGLPLTLGRLKVVHVQGYVDKARSKLAGWQGKLLNQAGRRELVRSVISAMPVYLMTA 65
Query: 267 M 269
M
Sbjct: 66 M 66
>ref|XP_007026458.1| Uncharacterized protein TCM_021522 [Theobroma cacao]
gi|508715063|gb|EOY06960.1| Uncharacterized protein
TCM_021522 [Theobroma cacao]
Length = 3503
Score = 56.2 bits (134), Expect = 5e-06
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +3
Query: 75 ENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIH 254
+ L VTY GAPL G+ + + L+ K+R +I+ W+ K+ PGGR L++ VLSS P++
Sbjct: 1084 KTLPVTYLGAPLHKGQKKVILFDSLISKIRDRISGWENKILSPGGRITLLRSVLSSQPMY 1143
Query: 255 LMSVM 269
L+ V+
Sbjct: 1144 LLQVL 1148
>ref|XP_007031313.1| Uncharacterized protein TCM_016763 [Theobroma cacao]
gi|508710342|gb|EOY02239.1| Uncharacterized protein
TCM_016763 [Theobroma cacao]
Length = 2127
Score = 56.2 bits (134), Expect = 5e-06
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +3
Query: 75 ENLLVTYSGAPLILGRLTAQILEPLVEKVRKKIACWKFKL*LPGGRSILVKHVLSSMPIH 254
+ L VTY GAPL G + + L+ K+R +I+ W+ K+ PGGR L++ VLSS+P++
Sbjct: 1504 KTLPVTYLGAPLHKGPKKVLLFDSLISKIRDRISGWENKILSPGGRITLLRSVLSSLPMY 1563
Query: 255 LMSVM 269
L+ V+
Sbjct: 1564 LLQVL 1568