BLASTX nr result

ID: Sinomenium22_contig00029258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00029258
         (285 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301442.2| hypothetical protein POPTR_0002s18020g [Popu...    67   3e-09
ref|XP_006491368.1| PREDICTED: pyruvate dehydrogenase E1 compone...    64   2e-08
ref|XP_006444730.1| hypothetical protein CICLE_v10020210mg [Citr...    64   2e-08
ref|XP_006491369.1| PREDICTED: pyruvate dehydrogenase E1 compone...    64   3e-08
ref|XP_006444729.1| hypothetical protein CICLE_v10020210mg [Citr...    64   3e-08
ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus co...    60   4e-07

>ref|XP_002301442.2| hypothetical protein POPTR_0002s18020g [Populus trichocarpa]
           gi|118486324|gb|ABK95003.1| unknown [Populus
           trichocarpa] gi|550345263|gb|EEE80715.2| hypothetical
           protein POPTR_0002s18020g [Populus trichocarpa]
          Length = 442

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 5/84 (5%)
 Frame = -3

Query: 271 ASTLSSIRITQPVVFSSNKST-RSLEK--PLFNPLRTG-ATASFLGSTRKLKRFNSAKS- 107
           AS  S+ + TQP  FS N +T RS EK    F+PLRT  +++SFLGSTRKL+  +++KS 
Sbjct: 4   ASAFSATKFTQP--FSLNGTTSRSHEKHQSFFDPLRTAPSSSSFLGSTRKLRLSSASKSK 61

Query: 106 LAAADLRRSAIVAVSDVVEEKKLK 35
           L A   RRSA+VAVSDVV+EKK+K
Sbjct: 62  LVANPNRRSAVVAVSDVVKEKKVK 85


>ref|XP_006491368.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3,
           chloroplastic-like isoform X1 [Citrus sinensis]
          Length = 434

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/80 (50%), Positives = 52/80 (65%)
 Frame = -3

Query: 274 MASTLSSIRITQPVVFSSNKSTRSLEKPLFNPLRTGATASFLGSTRKLKRFNSAKSLAAA 95
           MA+  SS +  QP+  +S  + RS +  LF+PL+TG   SFLGSTRKL R NS  S    
Sbjct: 1   MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLKTG--TSFLGSTRKL-RVNSVHSNQGN 57

Query: 94  DLRRSAIVAVSDVVEEKKLK 35
             RR  +VAVS+VV+EKK+K
Sbjct: 58  VRRRLPVVAVSEVVKEKKVK 77


>ref|XP_006444730.1| hypothetical protein CICLE_v10020210mg [Citrus clementina]
           gi|557546992|gb|ESR57970.1| hypothetical protein
           CICLE_v10020210mg [Citrus clementina]
          Length = 434

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 40/80 (50%), Positives = 52/80 (65%)
 Frame = -3

Query: 274 MASTLSSIRITQPVVFSSNKSTRSLEKPLFNPLRTGATASFLGSTRKLKRFNSAKSLAAA 95
           MA+  SS +  QP+  +S  + RS +  LF+PL+TG   SFLGSTRKL R NS  S    
Sbjct: 1   MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLKTG--TSFLGSTRKL-RVNSVHSNQGN 57

Query: 94  DLRRSAIVAVSDVVEEKKLK 35
             RR  +VAVS+VV+EKK+K
Sbjct: 58  VRRRLPVVAVSEVVKEKKVK 77


>ref|XP_006491369.1| PREDICTED: pyruvate dehydrogenase E1 component subunit alpha-3,
           chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 427

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/79 (50%), Positives = 51/79 (64%)
 Frame = -3

Query: 274 MASTLSSIRITQPVVFSSNKSTRSLEKPLFNPLRTGATASFLGSTRKLKRFNSAKSLAAA 95
           MA+  SS +  QP+  +S  + RS +  LF+PL+TG   SFLGSTRKL R NS  S    
Sbjct: 1   MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLKTG--TSFLGSTRKL-RVNSVHSNQGN 57

Query: 94  DLRRSAIVAVSDVVEEKKL 38
             RR  +VAVS+VV+EKKL
Sbjct: 58  VRRRLPVVAVSEVVKEKKL 76


>ref|XP_006444729.1| hypothetical protein CICLE_v10020210mg [Citrus clementina]
           gi|557546991|gb|ESR57969.1| hypothetical protein
           CICLE_v10020210mg [Citrus clementina]
          Length = 427

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 40/79 (50%), Positives = 51/79 (64%)
 Frame = -3

Query: 274 MASTLSSIRITQPVVFSSNKSTRSLEKPLFNPLRTGATASFLGSTRKLKRFNSAKSLAAA 95
           MA+  SS +  QP+  +S  + RS +  LF+PL+TG   SFLGSTRKL R NS  S    
Sbjct: 1   MATAYSSAKFVQPLSLNSTINGRSRDNSLFDPLKTG--TSFLGSTRKL-RVNSVHSNQGN 57

Query: 94  DLRRSAIVAVSDVVEEKKL 38
             RR  +VAVS+VV+EKKL
Sbjct: 58  VRRRLPVVAVSEVVKEKKL 76


>ref|XP_002515074.1| pyruvate dehydrogenase, putative [Ricinus communis]
           gi|223545554|gb|EEF47058.1| pyruvate dehydrogenase,
           putative [Ricinus communis]
          Length = 433

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 36/80 (45%), Positives = 51/80 (63%)
 Frame = -3

Query: 274 MASTLSSIRITQPVVFSSNKSTRSLEKPLFNPLRTGATASFLGSTRKLKRFNSAKSLAAA 95
           MA+  S+  + QP+   + +S     +PLF+PL+T  T+SF+GST KL+     K    +
Sbjct: 1   MATAFSATHLIQPLPVDNTRSYNK-HQPLFDPLKT--TSSFIGSTSKLRFSALPKLNHVS 57

Query: 94  DLRRSAIVAVSDVVEEKKLK 35
             RRSAIVAVS+ V+EKKLK
Sbjct: 58  SFRRSAIVAVSEAVKEKKLK 77


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