BLASTX nr result
ID: Sinomenium22_contig00028967
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00028967
(252 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_006307006.1| hypothetical protein CARUB_v10008584mg [Caps... 80 3e-13
ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citr... 76 4e-12
ref|XP_003628741.1| Pentatricopeptide repeat-containing protein ... 76 5e-12
emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera] 72 1e-10
ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_002533966.1| pentatricopeptide repeat-containing protein,... 68 1e-09
ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phas... 67 3e-09
ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat... 59 5e-07
ref|XP_006344297.1| PREDICTED: pentatricopeptide repeat-containi... 59 7e-07
ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containi... 58 1e-06
ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat... 57 2e-06
ref|XP_006364580.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_004236477.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily pr... 57 3e-06
>ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = -1
Query: 219 PPKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQ 40
PP RL+EE ISLLQ+C+ KQ+ Q+Q QIIA GFQ NE++ KLV+ C K++ ARQ
Sbjct: 32 PPHRLLEERFISLLQSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQ 91
Query: 39 VFDQISQPNVLLW 1
+FDQI PN+ LW
Sbjct: 92 LFDQIPDPNIALW 104
>ref|XP_004300978.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 590
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/69 (55%), Positives = 53/69 (76%)
Frame = -1
Query: 207 LVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVFDQ 28
L+EE ISLLQ+C+ +K++ Q+Q Q+ +GF QN++VA KLV+AC E K++A A QVFDQ
Sbjct: 3 LLEEKFISLLQSCKTIKELHQIQAQVTLHGFSQNDYVAPKLVTACAELKRMAYAHQVFDQ 62
Query: 27 ISQPNVLLW 1
I +PN LW
Sbjct: 63 IPEPNFALW 71
>ref|XP_006307006.1| hypothetical protein CARUB_v10008584mg [Capsella rubella]
gi|482575717|gb|EOA39904.1| hypothetical protein
CARUB_v10008584mg [Capsella rubella]
Length = 625
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/75 (46%), Positives = 53/75 (70%)
Frame = -1
Query: 225 YCPPKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACA 46
Y PKRL+EE LIS L++C+ KQ+ Q+Q+Q +++ N++V ++V+AC ++ A
Sbjct: 33 YKSPKRLLEEKLISFLESCKTQKQLLQIQSQTVSHELAHNDYVGPRIVAACCRITRIGYA 92
Query: 45 RQVFDQISQPNVLLW 1
RQVFD ISQPNV +W
Sbjct: 93 RQVFDGISQPNVSVW 107
>ref|XP_006448464.1| hypothetical protein CICLE_v10017589mg [Citrus clementina]
gi|557551075|gb|ESR61704.1| hypothetical protein
CICLE_v10017589mg [Citrus clementina]
Length = 611
Score = 76.3 bits (186), Expect = 4e-12
Identities = 30/72 (41%), Positives = 52/72 (72%)
Frame = -1
Query: 216 PKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQV 37
P RLVEE LI LLQ+CR K + Q+Q Q++ G +Q++++ ++++AC + K++ AR++
Sbjct: 21 PHRLVEEKLIYLLQSCRTTKHLHQIQTQVVTSGLEQSDYITPRIITACAQLKQMTYARKM 80
Query: 36 FDQISQPNVLLW 1
FD+I+ NV+ W
Sbjct: 81 FDKITDQNVVSW 92
>ref|XP_003628741.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522763|gb|AET03217.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 758
Score = 75.9 bits (185), Expect = 5e-12
Identities = 30/73 (41%), Positives = 52/73 (71%)
Frame = -1
Query: 219 PPKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQ 40
P +R+VEE I+LL++C+N +++ Q+Q QI+ +G + N+FVA ++ C+ K++ AR+
Sbjct: 6 PVQRIVEEKFITLLRSCKNYERLHQIQAQIVTHGLEHNDFVAPNFITTCSRFKRIHHARK 65
Query: 39 VFDQISQPNVLLW 1
+FD+I QPN W
Sbjct: 66 LFDKIPQPNTATW 78
>emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 71.6 bits (174), Expect = 1e-10
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = -1
Query: 180 LQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVFDQISQPNVLLW 1
+++C+ KQ+ Q+Q QIIA GFQ NE++ KLV+ C K++ ARQ+FDQI PN+ LW
Sbjct: 108 MRSCKTSKQVHQIQAQIIANGFQYNEYITPKLVTICATLKRMTYARQLFDQIPDPNIALW 167
>ref|XP_004509956.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cicer arietinum]
Length = 603
Score = 71.2 bits (173), Expect = 1e-10
Identities = 26/73 (35%), Positives = 51/73 (69%)
Frame = -1
Query: 219 PPKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQ 40
P +R++E+ ISLL++C++ + + Q+Q QI+ +G + N+FVA ++ C+ +++ AR+
Sbjct: 12 PVQRIIEDKFISLLRSCKSCEHLHQIQAQIVTHGLEHNDFVAPSFITTCSRLRRMQHARK 71
Query: 39 VFDQISQPNVLLW 1
+FD+I +PN W
Sbjct: 72 LFDKIPEPNTATW 84
>ref|XP_002533966.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526049|gb|EEF28413.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 515
Score = 67.8 bits (164), Expect = 1e-09
Identities = 29/72 (40%), Positives = 49/72 (68%)
Frame = -1
Query: 216 PKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQV 37
P RL+EE +ISLL +C+ L + Q+Q+ II +G Q N+++ K++++ K++ A ++
Sbjct: 61 PHRLLEEKIISLLYSCKTLNHLHQIQSHIINHGLQFNDYITPKIITSFALFKRMRHAHKL 120
Query: 36 FDQISQPNVLLW 1
FDQI +PNV W
Sbjct: 121 FDQIPEPNVSNW 132
>ref|XP_007156271.1| hypothetical protein PHAVU_003G272400g [Phaseolus vulgaris]
gi|561029625|gb|ESW28265.1| hypothetical protein
PHAVU_003G272400g [Phaseolus vulgaris]
Length = 618
Score = 67.0 bits (162), Expect = 3e-09
Identities = 28/71 (39%), Positives = 48/71 (67%)
Frame = -1
Query: 213 KRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVF 34
+R+ EE+LISLL++C+ ++ Q+ QI+A+G Q N++V ++AC ++ AR+VF
Sbjct: 18 QRVAEETLISLLRSCQTCTRLHQIHAQIVAHGLQGNDYVTPSFITACARLGRMGHARRVF 77
Query: 33 DQISQPNVLLW 1
D+ +QPN W
Sbjct: 78 DRTAQPNGATW 88
>ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/82 (40%), Positives = 52/82 (63%)
Frame = -1
Query: 246 FLYD*LRYCPPKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTE 67
F+ D L P+ ++EE ISLL++C+ + +++VQ QII +GFQ N +VA +V++
Sbjct: 52 FIDDTLTQKHPRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVG 111
Query: 66 SKKLACARQVFDQISQPNVLLW 1
K++A AR +FD P V LW
Sbjct: 112 LKQMAHARHLFDHFPDPKVELW 133
>ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 63.9 bits (154), Expect = 2e-08
Identities = 30/72 (41%), Positives = 48/72 (66%)
Frame = -1
Query: 216 PKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQV 37
P+ ++EE ISLL++C+ + +++VQ QII +GFQ N +VA +V++ K++A AR +
Sbjct: 20 PRWVLEEHFISLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHL 79
Query: 36 FDQISQPNVLLW 1
FD P V LW
Sbjct: 80 FDHFPDPKVELW 91
>ref|XP_003547890.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 619
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = -1
Query: 219 PPKRLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQ 40
P R+VE+ ISLL+TC ++ Q+Q QI+ +G + N++V ++AC + AR+
Sbjct: 16 PLHRVVEDKFISLLRTCGTCVRLHQIQAQIVTHGLEGNDYVTPSFITACARLGGIRRARR 75
Query: 39 VFDQISQPNVLLW 1
VFD+ +QPN W
Sbjct: 76 VFDKTAQPNGATW 88
>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 59.7 bits (143), Expect = 4e-07
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = -1
Query: 210 RLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVFD 31
R +++ SLLQTC +K++KQ+ QII GF Q F+ KL+S S L A +VF+
Sbjct: 15 RALQQHFFSLLQTCDTIKKLKQIHTQIIVNGFSQKNFLLVKLLSFYITSGNLLNAHKVFE 74
Query: 30 QISQPNVLLW 1
+I P+ +W
Sbjct: 75 RIENPSTTVW 84
>ref|XP_006465305.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Citrus sinensis]
Length = 741
Score = 59.3 bits (142), Expect = 5e-07
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = -1
Query: 219 PPKRLVEES-LISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESK---KLA 52
PP L +E+ LISL++TC ++ Q+KQ+ +Q I G N V +KLV+ C K K A
Sbjct: 30 PPSTLTQETPLISLIETCESMHQLKQIHSQTIKLGLLTNPTVQNKLVTFCCSEKGDMKYA 89
Query: 51 CARQVFDQISQPNVLLW 1
C +VF +I +P+V LW
Sbjct: 90 C--KVFRKIPRPSVFLW 104
>ref|XP_006344297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Solanum tuberosum]
Length = 610
Score = 58.9 bits (141), Expect = 7e-07
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = -1
Query: 210 RLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVFD 31
R++EE ISLLQ+C+ Q+K++Q QI +++ L+S C E KK++ A QVFD
Sbjct: 24 RILEEKFISLLQSCKTANQVKEIQTQITTQCVGYTKYIIPPLLSKCMEFKKISYAHQVFD 83
Query: 30 QI 25
QI
Sbjct: 84 QI 85
>ref|XP_004239417.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Solanum lycopersicum]
Length = 621
Score = 58.2 bits (139), Expect = 1e-06
Identities = 27/62 (43%), Positives = 40/62 (64%)
Frame = -1
Query: 210 RLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVFD 31
R++EE ISLLQ+C+ Q+K++Q QI +++ L+S C E KK++ A QVFD
Sbjct: 35 RILEEKFISLLQSCKTTNQLKEIQTQITIQCVGYTKYIIPPLLSKCMEFKKISYAHQVFD 94
Query: 30 QI 25
QI
Sbjct: 95 QI 96
>ref|XP_003533068.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15930-like [Glycine max]
Length = 738
Score = 57.4 bits (137), Expect = 2e-06
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Frame = -1
Query: 216 PKRLVE----ESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACT--ESKKL 55
PKR++ ES ISLL+ C+++ Q+KQ+ + I G + ++++ C ES K+
Sbjct: 24 PKRMISHCFGESPISLLEKCKSMYQLKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKM 83
Query: 54 ACARQVFDQISQPNVLLW 1
ARQVFD I QP + +W
Sbjct: 84 IYARQVFDAIPQPTLFIW 101
>ref|XP_006364580.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 552
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = -1
Query: 210 RLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVFD 31
R +++ L SLLQ+C+++KQ+ Q+ +I GF Q F+ +L+S S L A +F
Sbjct: 15 RALQQRLFSLLQSCKSIKQLTQIHAHVITNGFTQKNFILVRLLSPFLTSYSLKYADHIFS 74
Query: 30 QISQPNVLLW 1
Q+ P+ LW
Sbjct: 75 QVRSPSTTLW 84
>ref|XP_004236477.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum lycopersicum]
Length = 552
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/70 (35%), Positives = 41/70 (58%)
Frame = -1
Query: 210 RLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVSACTESKKLACARQVFD 31
R +++ L SLLQ+C+++KQ+ Q+ +I GF Q F+ +L+S S L A +F
Sbjct: 15 RALQQRLFSLLQSCKSIKQLTQIHAHVITNGFTQKNFILVRLLSPFLTSYSLKYADHIFS 74
Query: 30 QISQPNVLLW 1
Q+ P+ LW
Sbjct: 75 QVRSPSTTLW 84
>ref|XP_007037424.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508774669|gb|EOY21925.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 551
Score = 57.0 bits (136), Expect = 3e-06
Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = -1
Query: 210 RLVEESLISLLQTCRNLKQIKQVQNQIIAYGFQQNEFVASKLVS-ACTESKKLACARQVF 34
R++++S+ISLLQ R +K+I Q+ QII GF Q F+ L+S T S L A ++F
Sbjct: 15 RILQQSIISLLQKYRTIKKITQIHTQIIINGFSQKNFILVNLISFYITSSNNLPHALKIF 74
Query: 33 DQISQPNVLLW 1
+ I +P+ +W
Sbjct: 75 ETIEKPSTTIW 85