BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00028638
         (687 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16283.3| unnamed protein product [Vitis vinifera]              362   5e-98
ref|XP_002284994.1| PREDICTED: general transcription factor IIH ...   362   5e-98
ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citr...   351   1e-94
gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus...   347   3e-93
ref|XP_007015448.1| General transcription factor II H2 isoform 1...   346   4e-93
ref|XP_006489789.1| PREDICTED: general transcription factor IIH ...   346   5e-93
ref|XP_006489788.1| PREDICTED: general transcription factor IIH ...   346   5e-93
ref|XP_004493385.1| PREDICTED: general transcription factor IIH ...   346   5e-93
ref|XP_003624959.1| General transcription factor IIH subunit [Me...   345   6e-93
ref|XP_003537621.1| PREDICTED: general transcription factor IIH ...   342   5e-92
ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prun...   342   7e-92
ref|XP_003554116.1| PREDICTED: general transcription factor IIH ...   342   7e-92
ref|XP_006491820.1| PREDICTED: general transcription factor IIH ...   342   9e-92
ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citr...   340   3e-91
ref|NP_001142175.1| hypothetical protein [Zea mays] gi|194707472...   339   6e-91
ref|XP_004143721.1| PREDICTED: general transcription factor IIH ...   338   7e-91
ref|XP_004976174.1| PREDICTED: TFIIH basal transcription factor ...   337   2e-90
ref|XP_002448148.1| hypothetical protein SORBIDRAFT_06g022140 [S...   337   2e-90
ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor ...   337   3e-90
ref|XP_003580110.1| PREDICTED: general transcription factor IIH ...   336   4e-90

>emb|CBI16283.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  362 bits (930), Expect = 5e-98
 Identities = 176/218 (80%), Positives = 193/218 (88%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G++AWERAYADERSWESLQEDESGLL  ID  T++HAQY               IQKGLI
Sbjct: 96  GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 155

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+V+D SRAA+E D+KPSRM VVAK  EAFIREFFDQNPLS IGLVTI+DG+AQCLT
Sbjct: 156 RYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLT 215

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSPDSH+KALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG
Sbjct: 216 DLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 275

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQ+CKKSKIRCS++GLSAEI+IC+HLCQETGGS
Sbjct: 276 DIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGS 313


>ref|XP_002284994.1| PREDICTED: general transcription factor IIH subunit 2 [Vitis
           vinifera]
          Length = 433

 Score =  362 bits (930), Expect = 5e-98
 Identities = 176/218 (80%), Positives = 193/218 (88%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G++AWERAYADERSWESLQEDESGLL  ID  T++HAQY               IQKGLI
Sbjct: 35  GLDAWERAYADERSWESLQEDESGLLRPIDNKTIYHAQYRRRIRSLYSSTTTARIQKGLI 94

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+V+D SRAA+E D+KPSRM VVAK  EAFIREFFDQNPLS IGLVTI+DG+AQCLT
Sbjct: 95  RYLYIVVDLSRAASEMDFKPSRMAVVAKHIEAFIREFFDQNPLSQIGLVTIKDGLAQCLT 154

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSPDSH+KALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG
Sbjct: 155 DLGGSPDSHVKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 214

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQ+CKKSKIRCS++GLSAEI+IC+HLCQETGGS
Sbjct: 215 DIMETIQECKKSKIRCSVIGLSAEIFICRHLCQETGGS 252


>ref|XP_006420615.1| hypothetical protein CICLE_v10005033mg [Citrus clementina]
           gi|557522488|gb|ESR33855.1| hypothetical protein
           CICLE_v10005033mg [Citrus clementina]
          Length = 424

 Score =  351 bits (900), Expect = 1e-94
 Identities = 169/218 (77%), Positives = 191/218 (87%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER+YAD+RSWE+LQEDESG L  ID + ++HAQY               IQKGLI
Sbjct: 26  GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTVATARIQKGLI 85

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+VID SRAAAE D++PSRMVVVAKQ EAF+REFFDQNPLS IGLVT++DGVA CLT
Sbjct: 86  RYLYIVIDLSRAAAEMDFRPSRMVVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 145

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SHIKALMGKL CSGDSS+QNALDLVHG LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 146 DLGGSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPG 205

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQKCK+SKIRCS++GLSAE++ICKHLCQETGG+
Sbjct: 206 DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGT 243


>gb|EXB98563.1| General transcription factor IIH subunit 2 [Morus notabilis]
          Length = 423

 Score =  347 bits (889), Expect = 3e-93
 Identities = 170/218 (77%), Positives = 188/218 (86%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER YADERSWESLQEDESGLL  ID  T +HAQY               IQKGLI
Sbjct: 29  GLEAWERTYADERSWESLQEDESGLLRPIDNKTFYHAQYRRRLRSASAVR----IQKGLI 84

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYL++VID S+AAAE D++PSRM VVAK  EAFIREFFDQNPLS +GLVTI+DGVA CLT
Sbjct: 85  RYLFLVIDLSKAAAEMDFRPSRMAVVAKHVEAFIREFFDQNPLSQVGLVTIKDGVAHCLT 144

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SH+K+LMGKLECSG+SS+QNALDLVH YLNQIPSYGHREVLI YSALSTCDPG
Sbjct: 145 DLGGSPESHVKSLMGKLECSGESSIQNALDLVHDYLNQIPSYGHREVLIFYSALSTCDPG 204

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQKCKKSKIRCS++GLSAEI+ICKHLCQETGGS
Sbjct: 205 DIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGS 242


>ref|XP_007015448.1| General transcription factor II H2 isoform 1 [Theobroma cacao]
           gi|590585467|ref|XP_007015449.1| General transcription
           factor II H2 isoform 1 [Theobroma cacao]
           gi|590585471|ref|XP_007015450.1| General transcription
           factor II H2 isoform 1 [Theobroma cacao]
           gi|508785811|gb|EOY33067.1| General transcription factor
           II H2 isoform 1 [Theobroma cacao]
           gi|508785812|gb|EOY33068.1| General transcription factor
           II H2 isoform 1 [Theobroma cacao]
           gi|508785813|gb|EOY33069.1| General transcription factor
           II H2 isoform 1 [Theobroma cacao]
          Length = 420

 Score =  346 bits (888), Expect = 4e-93
 Identities = 167/217 (76%), Positives = 189/217 (87%), Gaps = 1/217 (0%)
 Frame = +3

Query: 39  MEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLIR 215
           ++AWER Y DERSWESLQEDESGLL  ID   L+H+QY               IQKGLIR
Sbjct: 26  LDAWERTYTDERSWESLQEDESGLLRPIDNKALYHSQYRRRLRSLSSTATAARIQKGLIR 85

Query: 216 YLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLTD 395
           YLY+VID SRAA+ETD++PSR+VV+AK  EAFIREFFDQNPLS +GL+TI+DGVAQCLTD
Sbjct: 86  YLYLVIDLSRAASETDFRPSRIVVIAKHVEAFIREFFDQNPLSQVGLLTIKDGVAQCLTD 145

Query: 396 LGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGD 575
           LGGSP+SHIKALM KLECSGDSSLQNALDLV GYLNQIPSYGHREVLILY+ALSTCDPGD
Sbjct: 146 LGGSPESHIKALMNKLECSGDSSLQNALDLVDGYLNQIPSYGHREVLILYAALSTCDPGD 205

Query: 576 IMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           IME+IQKCKKSKIRCS++GL+AE++ICKHLCQETGG+
Sbjct: 206 IMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGT 242


>ref|XP_006489789.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X2 [Citrus sinensis]
          Length = 387

 Score =  346 bits (887), Expect = 5e-93
 Identities = 167/218 (76%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER+YAD+RSWE+LQEDESG L  ID + ++HAQY               IQKGLI
Sbjct: 26  GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLI 85

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+VID SRAAAE D++PSRM VVAKQ EAF+REFF QNPLS IGLVT++DGVA CLT
Sbjct: 86  RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFYQNPLSQIGLVTVKDGVANCLT 145

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SHIKALMGKL CSGDSS+QNALDLVHG LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 146 DLGGSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPG 205

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQKCK+SKIRCS++GLSAE++ICKHLCQETGG+
Sbjct: 206 DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGT 243


>ref|XP_006489788.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X1 [Citrus sinensis]
          Length = 424

 Score =  346 bits (887), Expect = 5e-93
 Identities = 167/218 (76%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER+YAD+RSWE+LQEDESG L  ID + ++HAQY               IQKGLI
Sbjct: 26  GLEAWERSYADDRSWEALQEDESGFLRPIDNSAIYHAQYRRRLRGRSLTAATARIQKGLI 85

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+VID SRAAAE D++PSRM VVAKQ EAF+REFF QNPLS IGLVT++DGVA CLT
Sbjct: 86  RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFYQNPLSQIGLVTVKDGVANCLT 145

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SHIKALMGKL CSGDSS+QNALDLVHG LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 146 DLGGSPESHIKALMGKLGCSGDSSIQNALDLVHGLLNQIPSYGHREVLILYSALSTCDPG 205

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQKCK+SKIRCS++GLSAE++ICKHLCQETGG+
Sbjct: 206 DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQETGGT 243


>ref|XP_004493385.1| PREDICTED: general transcription factor IIH subunit 2-like [Cicer
           arietinum]
          Length = 422

 Score =  346 bits (887), Expect = 5e-93
 Identities = 165/218 (75%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWERAY ++RSWESLQEDESGLL  ID   +HHAQY               IQKGLI
Sbjct: 26  GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALAATAATARIQKGLI 85

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RY+Y+V+D S+AA+E D++PSRM V+AKQ EAFIREFFDQNPLSH+GLVT +DGVAQ LT
Sbjct: 86  RYMYIVVDLSKAASERDFRPSRMAVIAKQVEAFIREFFDQNPLSHVGLVTTKDGVAQSLT 145

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SHIKALMGKLECSGD+SLQNALDLVH  LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 146 DLGGSPESHIKALMGKLECSGDASLQNALDLVHDNLNQIPSYGHREVLILYSALSTCDPG 205

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           D+ME+IQKCKKSKIRCS++GL+AE++ICKHLCQETGG+
Sbjct: 206 DLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGT 243


>ref|XP_003624959.1| General transcription factor IIH subunit [Medicago truncatula]
           gi|355499974|gb|AES81177.1| General transcription factor
           IIH subunit [Medicago truncatula]
          Length = 426

 Score =  345 bits (886), Expect = 6e-93
 Identities = 164/218 (75%), Positives = 188/218 (86%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWERAY ++RSWESLQEDESGLL  ID   +HHAQY               IQKGLI
Sbjct: 25  GLEAWERAYTEDRSWESLQEDESGLLRPIDTTAIHHAQYRRRLRALASNAATARIQKGLI 84

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+V+D S+AA+E D++PSRM V+AKQ E FIREFFDQNPLSH+GLVT +DGVA CLT
Sbjct: 85  RYLYIVVDLSKAASERDFRPSRMAVIAKQVELFIREFFDQNPLSHVGLVTTKDGVANCLT 144

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SHIKALMGKLECSGD+SLQNAL+LVH  LNQIPSYGHREVLILYSALSTCDPG
Sbjct: 145 DLGGSPESHIKALMGKLECSGDASLQNALELVHSNLNQIPSYGHREVLILYSALSTCDPG 204

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           D+ME+IQKCKKSKIRCS++GL+AE++ICKHLCQETGG+
Sbjct: 205 DLMETIQKCKKSKIRCSVIGLAAEMFICKHLCQETGGT 242


>ref|XP_003537621.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X1 [Glycine max] gi|571487648|ref|XP_006590708.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X2 [Glycine max]
           gi|571487650|ref|XP_006590709.1| PREDICTED: general
           transcription factor IIH subunit 2-like isoform X3
           [Glycine max] gi|571487652|ref|XP_006590710.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X4 [Glycine max]
           gi|571487654|ref|XP_006590711.1| PREDICTED: general
           transcription factor IIH subunit 2-like isoform X5
           [Glycine max]
          Length = 419

 Score =  342 bits (878), Expect = 5e-92
 Identities = 160/218 (73%), Positives = 191/218 (87%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER YA++RSWE+LQEDESGLL  ID   ++HAQY               IQKGLI
Sbjct: 23  GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+V+D S+AA+E D++PSRMVV+ KQ EAFIREFFDQNPLSH+GLVTI+DG+A C+T
Sbjct: 83  RYLYIVVDLSKAASERDFRPSRMVVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCIT 142

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           +LGGSP+SHIKALMGKLECSGD+SLQNAL+LV GYLNQIPSYGHREVLILYSALSTCDPG
Sbjct: 143 ELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPG 202

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           D+ME+IQKCKKSKIRCS++GL+AE+++CKHLC+ETGG+
Sbjct: 203 DLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCEETGGT 240


>ref|XP_007205253.1| hypothetical protein PRUPE_ppa006259mg [Prunus persica]
           gi|462400895|gb|EMJ06452.1| hypothetical protein
           PRUPE_ppa006259mg [Prunus persica]
          Length = 420

 Score =  342 bits (877), Expect = 7e-92
 Identities = 171/217 (78%), Positives = 186/217 (85%), Gaps = 1/217 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+ AWERAYADERSWESLQEDESGLL  ID  +L HAQY               IQKGLI
Sbjct: 26  GLAAWERAYADERSWESLQEDESGLLQPIDNQSLKHAQYRRRLRAASTAR----IQKGLI 81

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RY+Y+VID S+AAAE D++PSRM VVAK  EAFI EFF QNPLS +GLVTI+DGVA CLT
Sbjct: 82  RYVYIVIDLSKAAAEMDFRPSRMGVVAKHVEAFIIEFFYQNPLSQVGLVTIKDGVAHCLT 141

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SH+KALMGKLECSGDSSLQNALDLVHGYL QIPSYGHREVLILYSALSTCDPG
Sbjct: 142 DLGGSPNSHVKALMGKLECSGDSSLQNALDLVHGYLEQIPSYGHREVLILYSALSTCDPG 201

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGG 683
           DIME+IQKCKKSKIRCS++GLSAEI+ICKHLCQETGG
Sbjct: 202 DIMETIQKCKKSKIRCSVIGLSAEIFICKHLCQETGG 238


>ref|XP_003554116.1| PREDICTED: general transcription factor IIH subunit 2 [Glycine max]
          Length = 420

 Score =  342 bits (877), Expect = 7e-92
 Identities = 160/218 (73%), Positives = 190/218 (87%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER YA++RSWE+LQEDESGLL  ID   ++HAQY               IQKGLI
Sbjct: 23  GLEAWERTYAEDRSWEALQEDESGLLRPIDTTAIYHAQYRRRLRTLAATAATARIQKGLI 82

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+V+D S+AA+E D++PSRM V+ KQ EAFIREFFDQNPLSH+GLVTI+DG+A C+T
Sbjct: 83  RYLYIVVDLSKAASERDFRPSRMAVMGKQVEAFIREFFDQNPLSHVGLVTIKDGIAHCIT 142

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           +LGGSP+SHIKALMGKLECSGD+SLQNAL+LV GYLNQIPSYGHREVLILYSALSTCDPG
Sbjct: 143 ELGGSPESHIKALMGKLECSGDASLQNALELVLGYLNQIPSYGHREVLILYSALSTCDPG 202

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           D+ME+IQKCKKSKIRCS++GL+AE+++CKHLCQETGG+
Sbjct: 203 DLMETIQKCKKSKIRCSVIGLAAEMFVCKHLCQETGGT 240


>ref|XP_006491820.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
           X1 [Citrus sinensis] gi|568877611|ref|XP_006491821.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X2 [Citrus sinensis]
           gi|568877613|ref|XP_006491822.1| PREDICTED: general
           transcription factor IIH subunit 2-like isoform X3
           [Citrus sinensis] gi|568877615|ref|XP_006491823.1|
           PREDICTED: general transcription factor IIH subunit
           2-like isoform X4 [Citrus sinensis]
          Length = 425

 Score =  342 bits (876), Expect = 9e-92
 Identities = 165/218 (75%), Positives = 187/218 (85%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER+YAD+RSWE+LQEDESG L  ID +  +HAQY               IQKGLI
Sbjct: 27  GLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLI 86

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+VID SRAAAE D++PSRM VVAKQ EAF+REFFDQNPLS IGLVT++DGVA CLT
Sbjct: 87  RYLYIVIDLSRAAAEMDFRPSRMAVVAKQVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 146

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP++HIK LMGKL CSGDSSLQNALDLV G L+QIPSYGHREVLILYSALSTCDPG
Sbjct: 147 DLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQKCK+SKIRCS++GLSAE++ICKHLCQ+TGGS
Sbjct: 207 DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGS 244


>ref|XP_006428490.1| hypothetical protein CICLE_v10011800mg [Citrus clementina]
           gi|567871805|ref|XP_006428492.1| hypothetical protein
           CICLE_v10011800mg [Citrus clementina]
           gi|557530547|gb|ESR41730.1| hypothetical protein
           CICLE_v10011800mg [Citrus clementina]
           gi|557530549|gb|ESR41732.1| hypothetical protein
           CICLE_v10011800mg [Citrus clementina]
          Length = 425

 Score =  340 bits (872), Expect = 3e-91
 Identities = 164/218 (75%), Positives = 187/218 (85%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+EAWER+YAD+RSWE+LQEDESG L  ID +  +HAQY               IQKGLI
Sbjct: 27  GLEAWERSYADDRSWEALQEDESGFLRPIDNSAFYHAQYRRRLRDRSLVATTARIQKGLI 86

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+VID SRAAAE D++PSRM VVAK+ EAF+REFFDQNPLS IGLVT++DGVA CLT
Sbjct: 87  RYLYIVIDLSRAAAEMDFRPSRMAVVAKRVEAFVREFFDQNPLSQIGLVTVKDGVANCLT 146

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP++HIK LMGKL CSGDSSLQNALDLV G L+QIPSYGHREVLILYSALSTCDPG
Sbjct: 147 DLGGSPEAHIKVLMGKLGCSGDSSLQNALDLVQGLLSQIPSYGHREVLILYSALSTCDPG 206

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIME+IQKCK+SKIRCS++GLSAE++ICKHLCQ+TGGS
Sbjct: 207 DIMETIQKCKESKIRCSVIGLSAEMFICKHLCQDTGGS 244


>ref|NP_001142175.1| hypothetical protein [Zea mays] gi|194707472|gb|ACF87820.1| unknown
           [Zea mays] gi|414586431|tpg|DAA37002.1| TPA:
           hypothetical protein ZEAMMB73_625811 [Zea mays]
          Length = 428

 Score =  339 bits (869), Expect = 6e-91
 Identities = 166/217 (76%), Positives = 187/217 (86%), Gaps = 1/217 (0%)
 Frame = +3

Query: 39  MEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLIR 215
           +EAWERAYADERSWESLQEDESGLL  +D  TL HAQY               IQKGLIR
Sbjct: 38  LEAWERAYADERSWESLQEDESGLLRPVDTKTLVHAQYRRRLLLRSAAAAAARIQKGLIR 97

Query: 216 YLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLTD 395
           YLY+VID SRAA+E DY+PSRM VVAK AEAFIREFFDQNPLSH+GLVTI+DG+A  LT+
Sbjct: 98  YLYIVIDLSRAASEMDYRPSRMAVVAKHAEAFIREFFDQNPLSHVGLVTIKDGIAHRLTE 157

Query: 396 LGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGD 575
           +GGSP+S IKALMGKLECSGDSSLQNALDLVHGYL+Q+PSYGH+EVLILYSAL+T DPGD
Sbjct: 158 IGGSPESQIKALMGKLECSGDSSLQNALDLVHGYLDQVPSYGHKEVLILYSALNTFDPGD 217

Query: 576 IMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           I E+I KCKKSKIRCS++GL+AEI+ICKHLC+ETGGS
Sbjct: 218 ITETIAKCKKSKIRCSVIGLAAEIFICKHLCEETGGS 254


>ref|XP_004143721.1| PREDICTED: general transcription factor IIH subunit 2-like [Cucumis
           sativus]
          Length = 423

 Score =  338 bits (868), Expect = 7e-91
 Identities = 159/219 (72%), Positives = 186/219 (84%), Gaps = 1/219 (0%)
 Frame = +3

Query: 33  SGMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGL 209
           +G+ AWER YAD+RSWE+LQEDESGLL  ID   ++HAQY               IQKGL
Sbjct: 23  NGLAAWERTYADDRSWEALQEDESGLLRPIDNKAIYHAQYRRRLRTLSSLATTARIQKGL 82

Query: 210 IRYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCL 389
           IRYLY+VIDFS+AA E D++PSRM VVAK  +AF+REFFDQNPLS IGLVTI+DG A CL
Sbjct: 83  IRYLYIVIDFSKAATEMDFRPSRMAVVAKHVDAFVREFFDQNPLSQIGLVTIKDGFANCL 142

Query: 390 TDLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDP 569
           TDLGGSP+SH+KALMGKLECSGD+SLQN L+LVH YLNQIPSYGHREVL+LYSAL++CDP
Sbjct: 143 TDLGGSPESHVKALMGKLECSGDASLQNGLELVHSYLNQIPSYGHREVLVLYSALNSCDP 202

Query: 570 GDIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           GDIME++QKCK SKIRCS++GL+AEI+IC+HLCQETGGS
Sbjct: 203 GDIMETVQKCKTSKIRCSVIGLTAEIFICRHLCQETGGS 241


>ref|XP_004976174.1| PREDICTED: TFIIH basal transcription factor complex p47
           subunit-like [Setaria italica]
          Length = 490

 Score =  337 bits (864), Expect = 2e-90
 Identities = 162/217 (74%), Positives = 190/217 (87%), Gaps = 1/217 (0%)
 Frame = +3

Query: 39  MEAWERAYADERSWESLQEDESGLL-SIDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLIR 215
           +EAWERAYAD+RSWE+LQED+SGLL SID  T+ HAQY               IQKGLIR
Sbjct: 41  LEAWERAYADDRSWEALQEDQSGLLRSIDTKTVVHAQYRRRLLLRSAAAAAARIQKGLIR 100

Query: 216 YLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLTD 395
           YLY+VID SRAA+E DY+PSRM VVAK AEAFIREFFDQNPLSH+GLVTI+DG++  LT+
Sbjct: 101 YLYIVIDLSRAASEMDYRPSRMAVVAKHAEAFIREFFDQNPLSHVGLVTIKDGISHRLTE 160

Query: 396 LGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGD 575
           +GGSP+S I ALMGKLECSGDSSLQNAL+LV+GYL+Q+PSYGH+EVLILYSAL+TCDPGD
Sbjct: 161 IGGSPESQINALMGKLECSGDSSLQNALELVNGYLDQVPSYGHKEVLILYSALNTCDPGD 220

Query: 576 IMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           IME+I+KCKKSKIRCS++GL+AEI+ICKHLC+ETGGS
Sbjct: 221 IMETIEKCKKSKIRCSVIGLAAEIFICKHLCEETGGS 257


>ref|XP_002448148.1| hypothetical protein SORBIDRAFT_06g022140 [Sorghum bicolor]
           gi|241939331|gb|EES12476.1| hypothetical protein
           SORBIDRAFT_06g022140 [Sorghum bicolor]
          Length = 431

 Score =  337 bits (864), Expect = 2e-90
 Identities = 165/217 (76%), Positives = 187/217 (86%), Gaps = 1/217 (0%)
 Frame = +3

Query: 39  MEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLIR 215
           +EAWERAYADERSWESLQEDESGLL  ID   L H+QY               IQKGLIR
Sbjct: 41  LEAWERAYADERSWESLQEDESGLLHPIDTKALVHSQYRRRLLLRSAAAAAARIQKGLIR 100

Query: 216 YLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLTD 395
           YLY+VID SRAA+E DY+PSRM VVAK AEAFIREFFDQNPLSH+GLVTI+DG+A  LT+
Sbjct: 101 YLYIVIDLSRAASEMDYRPSRMAVVAKHAEAFIREFFDQNPLSHVGLVTIKDGIAHRLTE 160

Query: 396 LGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGD 575
           +GGSP+S IKALMGKLECSGDSSLQNAL+LVHGYL+Q+PSYGH+EVLILYSAL+T DPGD
Sbjct: 161 IGGSPESQIKALMGKLECSGDSSLQNALELVHGYLDQVPSYGHKEVLILYSALNTFDPGD 220

Query: 576 IMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           IME+I KCKKSKIRCS++GL+AEI+ICKHLC+ETGGS
Sbjct: 221 IMETITKCKKSKIRCSVIGLAAEIFICKHLCEETGGS 257


>ref|XP_004309875.1| PREDICTED: TFIIH basal transcription factor complex p47
           subunit-like [Fragaria vesca subsp. vesca]
          Length = 420

 Score =  337 bits (863), Expect = 3e-90
 Identities = 167/218 (76%), Positives = 187/218 (85%), Gaps = 1/218 (0%)
 Frame = +3

Query: 36  GMEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLI 212
           G+ AWERAYADERSWESLQEDESGLL  ID  +LHHAQY               IQKGLI
Sbjct: 25  GLAAWERAYADERSWESLQEDESGLLRPIDNQSLHHAQYRRRLRAATTAR----IQKGLI 80

Query: 213 RYLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLT 392
           RYLY+VID S+AA+E D++PSRM VVAK  EAFIRE+F QNPLS +GLVTI+DGV+  LT
Sbjct: 81  RYLYIVIDLSKAASEMDFRPSRMGVVAKHVEAFIREYFYQNPLSQVGLVTIKDGVSHILT 140

Query: 393 DLGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPG 572
           DLGGSP+SH+KALMGKLECSGD+SLQNALDLV GYL+QIPSYGHREVLI+YSALSTCDPG
Sbjct: 141 DLGGSPESHVKALMGKLECSGDASLQNALDLVQGYLDQIPSYGHREVLIMYSALSTCDPG 200

Query: 573 DIMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           DIM +IQKCKKSKIRCS++GLSAEI+ICKHLCQETGGS
Sbjct: 201 DIMGTIQKCKKSKIRCSVIGLSAEIFICKHLCQETGGS 238


>ref|XP_003580110.1| PREDICTED: general transcription factor IIH subunit 2-like
           [Brachypodium distachyon]
          Length = 428

 Score =  336 bits (862), Expect = 4e-90
 Identities = 163/217 (75%), Positives = 189/217 (87%), Gaps = 1/217 (0%)
 Frame = +3

Query: 39  MEAWERAYADERSWESLQEDESGLLS-IDGNTLHHAQYXXXXXXXXXXXXXXXIQKGLIR 215
           +EAWERAYAD+RSWE+LQEDESGLL  ID   L H+QY               IQKGLIR
Sbjct: 41  LEAWERAYADDRSWEALQEDESGLLRPIDTKNLVHSQYRRRLLLRSAAAAVR-IQKGLIR 99

Query: 216 YLYVVIDFSRAAAETDYKPSRMVVVAKQAEAFIREFFDQNPLSHIGLVTIRDGVAQCLTD 395
           YLY+VID SRAA+E DY+PSRM VVAK AEAFIREFFDQNPLSH+GLVTI+DG++  LTD
Sbjct: 100 YLYIVIDLSRAASEMDYRPSRMAVVAKCAEAFIREFFDQNPLSHVGLVTIKDGISHRLTD 159

Query: 396 LGGSPDSHIKALMGKLECSGDSSLQNALDLVHGYLNQIPSYGHREVLILYSALSTCDPGD 575
           +GGSP+S IKALMGKLECSGDSSLQNAL+L+HGYLNQIPSYGH+EVLILYSAL+TCDPGD
Sbjct: 160 IGGSPESQIKALMGKLECSGDSSLQNALELIHGYLNQIPSYGHKEVLILYSALNTCDPGD 219

Query: 576 IMESIQKCKKSKIRCSIVGLSAEIYICKHLCQETGGS 686
           +ME+++KCKKSKIRCS++GL+AEI+ICKHLC+ETGGS
Sbjct: 220 VMETVEKCKKSKIRCSVIGLAAEIFICKHLCEETGGS 256