BLASTX nr result
ID: Sinomenium22_contig00028615
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00028615 (662 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABN08556.1| Polyprotein, putative [Medicago truncatula] 59 2e-06 gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis] 58 3e-06 gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif);... 58 3e-06 gb|ABB00038.1| reverse transcriptase family member [Glycine max] 58 3e-06 ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago ... 57 4e-06 >gb|ABN08556.1| Polyprotein, putative [Medicago truncatula] Length = 137 Score = 58.5 bits (140), Expect = 2e-06 Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%) Frame = -2 Query: 661 LYETKCWLVKRQNA-ELSAMEIQICR*MYGKTSKYRTKNE*IWKTVEVVPTGERMSEN*L 485 LY T+CW VK Q+ ++S +E+++ R M GKT R +N+ I + V V P E++ EN L Sbjct: 67 LYGTECWAVKSQHENQVSVVEMRMLRWMSGKTRHDRIRNDTIRERVGVAPIVEKLVENRL 126 Query: 484 RWFGHM 467 RWFGH+ Sbjct: 127 RWFGHV 132 >gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis] Length = 1413 Score = 57.8 bits (138), Expect = 3e-06 Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -2 Query: 661 LYETKCWLVKRQN-AELSAMEIQICR*MYGKTSKYRTKNE*IWKTVEVVPTGERMSEN*L 485 LY +KCW +KRQ+ +++S E+++ R M G+T R KNE I V V P +++ E L Sbjct: 968 LYGSKCWAIKRQHISKMSVAEMRMLRWMSGQTRMDRIKNEVIRSKVGVAPIEDKVREGRL 1027 Query: 484 RWFGHM 467 RWFGH+ Sbjct: 1028 RWFGHV 1033 >gb|ABD32695.2| RNA-binding region RNP-1 (RNA recognition motif); Calcium-binding EF-hand [Medicago truncatula] Length = 559 Score = 57.8 bits (138), Expect = 3e-06 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -2 Query: 661 LYETKCWLVKRQNA-ELSAMEIQICR*MYGKTSKYRTKNE*IWKTVEVVPTGERMSEN*L 485 LY T+CW VK Q+ ++S E+++ R M GKT R +N+ I + V V P E++ EN L Sbjct: 289 LYGTECWAVKSQHENQVSVAEMRMLRWMSGKTRHDRIRNDTIRERVGVAPIVEKLVENRL 348 Query: 484 RWFGHM 467 RWFGH+ Sbjct: 349 RWFGHV 354 >gb|ABB00038.1| reverse transcriptase family member [Glycine max] Length = 377 Score = 57.8 bits (138), Expect = 3e-06 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 1/66 (1%) Frame = -2 Query: 661 LYETKCWLVKRQNA-ELSAMEIQICR*MYGKTSKYRTKNE*IWKTVEVVPTGERMSEN*L 485 LY T+CW VK Q+ ++ E+++ R M GKT + + +NE I + V V P E+M EN L Sbjct: 247 LYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRL 306 Query: 484 RWFGHM 467 RWFGH+ Sbjct: 307 RWFGHV 312 >ref|XP_003588515.1| hypothetical protein MTR_1g008050 [Medicago truncatula] gi|355477563|gb|AES58766.1| hypothetical protein MTR_1g008050 [Medicago truncatula] Length = 1675 Score = 57.4 bits (137), Expect = 4e-06 Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%) Frame = -2 Query: 661 LYETKCWLVKRQN-AELSAMEIQICR*MYGKTSKYRTKNE*IWKTVEVVPTGERMSEN*L 485 LY T+CW+VK Q+ +++S E+++ R M GKT + R +N+ I + V V P E++ EN L Sbjct: 1266 LYGTECWVVKSQHESKVSVAEMRMLRWMSGKTRQDRIRNDTIRERVGVAPIVEKLVENRL 1325 Query: 484 RWFGHM 467 RW GH+ Sbjct: 1326 RWLGHV 1331