BLASTX nr result
ID: Sinomenium22_contig00028600
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00028600
(275 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007208039.1| hypothetical protein PRUPE_ppa002768mg [Prun... 71 1e-10
ref|XP_007029385.1| Tetratricopeptide-like helical, putative iso... 69 5e-10
ref|XP_004492833.1| PREDICTED: pentatricopeptide repeat-containi... 65 7e-09
ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pen... 65 7e-09
emb|CBI17644.3| unnamed protein product [Vitis vinifera] 65 7e-09
emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera] 65 7e-09
ref|XP_006602844.1| PREDICTED: putative pentatricopeptide repeat... 64 2e-08
ref|XP_006587808.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_007139730.1| hypothetical protein PHAVU_008G054600g [Phas... 59 4e-07
gb|EYU39453.1| hypothetical protein MIMGU_mgv1a017931mg, partial... 60 4e-07
gb|EXC29932.1| hypothetical protein L484_015125 [Morus notabilis] 59 5e-07
ref|XP_004234885.1| PREDICTED: putative pentatricopeptide repeat... 59 9e-07
ref|XP_003624159.1| Pentatricopeptide repeat-containing protein ... 59 9e-07
ref|XP_002514857.1| pentatricopeptide repeat-containing protein,... 58 1e-06
ref|XP_006352141.1| PREDICTED: putative pentatricopeptide repeat... 57 2e-06
>ref|XP_007208039.1| hypothetical protein PRUPE_ppa002768mg [Prunus persica]
gi|462403681|gb|EMJ09238.1| hypothetical protein
PRUPE_ppa002768mg [Prunus persica]
Length = 635
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/79 (45%), Positives = 49/79 (62%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D K++DLFRR+PFKD++S NTI+ G +RNG ALELL ++ EIG F +VTFS
Sbjct: 99 DMEKALDLFRRLPFKDVTSWNTIIYGLMRNGHETYALELLSEMVEIGPPFDKVTFSVALV 158
Query: 59 XXXXXXXXXXERKIHCKIL 3
R+IH ++L
Sbjct: 159 LASSLYVLELGRQIHGRVL 177
>ref|XP_007029385.1| Tetratricopeptide-like helical, putative isoform 1 [Theobroma
cacao] gi|590638415|ref|XP_007029386.1|
Tetratricopeptide-like helical, putative isoform 1
[Theobroma cacao] gi|508717990|gb|EOY09887.1|
Tetratricopeptide-like helical, putative isoform 1
[Theobroma cacao] gi|508717991|gb|EOY09888.1|
Tetratricopeptide-like helical, putative isoform 1
[Theobroma cacao]
Length = 752
Score = 68.6 bits (166), Expect(2) = 5e-10
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D K++D+FRR+ KD++S NTI+ G +RNG R+ALELLY++ + GTV EVTFS
Sbjct: 219 DVEKAVDMFRRLSSKDVASWNTIIDGLMRNGPKRMALELLYEMVKNGTVLDEVTFSISLV 278
Query: 59 XXXXXXXXXXERKIHCKIL 3
++IH ++L
Sbjct: 279 LVSSFMDIELGKQIHGRVL 297
Score = 20.8 bits (42), Expect(2) = 5e-10
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -3
Query: 273 IMIGVYLDIGD 241
IMIG +L+IGD
Sbjct: 209 IMIGAHLNIGD 219
>ref|XP_004492833.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cicer arietinum]
Length = 755
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/88 (37%), Positives = 51/88 (57%)
Frame = -1
Query: 266 LVCIWILETDT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFS 87
++ ++ E D KS+D+FR +P+KD+ S NTI+ G +++G ALE LY + E GT FS
Sbjct: 205 MIGAYLREGDVEKSLDMFRNLPYKDVVSWNTIIDGLMQHGNEGFALEQLYCMVEFGTEFS 264
Query: 86 EVTFSXXXXXXXXXXXXXXERKIHCKIL 3
VTFS R++H ++L
Sbjct: 265 AVTFSIALILASSLSLVEIGRQLHGRVL 292
>ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330 [Vitis vinifera]
Length = 1008
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D KS+DLFR++P KD +S NT++ G +RNG RVALELLY++ G F+++TFS
Sbjct: 469 DMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALV 528
Query: 59 XXXXXXXXXXERKIHCKIL 3
++IH ++L
Sbjct: 529 LASSLSVLGLGKQIHTQVL 547
>emb|CBI17644.3| unnamed protein product [Vitis vinifera]
Length = 628
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D KS+DLFR++P KD +S NT++ G +RNG RVALELLY++ G F+++TFS
Sbjct: 215 DMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALV 274
Query: 59 XXXXXXXXXXERKIHCKIL 3
++IH ++L
Sbjct: 275 LASSLSVLGLGKQIHTQVL 293
>emb|CAN82639.1| hypothetical protein VITISV_028820 [Vitis vinifera]
Length = 871
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/79 (41%), Positives = 49/79 (62%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D KS+DLFR++P KD +S NT++ G +RNG RVALELLY++ G F+++TFS
Sbjct: 179 DMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALV 238
Query: 59 XXXXXXXXXXERKIHCKIL 3
++IH ++L
Sbjct: 239 LASSLSVLGLGKQIHTQVL 257
>ref|XP_006602844.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 756
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/79 (45%), Positives = 46/79 (58%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D KS+D+FRR+P+KD+ S NTIV G L+ G R ALE LY + E GT FS VTFS
Sbjct: 216 DVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERHALEQLYCMVECGTEFSAVTFSIALI 275
Query: 59 XXXXXXXXXXERKIHCKIL 3
R++H +L
Sbjct: 276 LASSLSHVELGRQLHGMVL 294
>ref|XP_006587808.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 771
Score = 64.3 bits (155), Expect = 2e-08
Identities = 35/88 (39%), Positives = 50/88 (56%)
Frame = -1
Query: 266 LVCIWILETDT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFS 87
++ ++ D KS+D+FRR+P+KD+ S NTIV G ++ G R ALE LY + E GT FS
Sbjct: 222 MISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYERQALEQLYCMVECGTEFS 281
Query: 86 EVTFSXXXXXXXXXXXXXXERKIHCKIL 3
VTFS R++H +L
Sbjct: 282 VVTFSIALILSSSLSLVELGRQLHGMVL 309
>ref|XP_007139730.1| hypothetical protein PHAVU_008G054600g [Phaseolus vulgaris]
gi|561012863|gb|ESW11724.1| hypothetical protein
PHAVU_008G054600g [Phaseolus vulgaris]
Length = 755
Score = 58.5 bits (140), Expect(2) = 4e-07
Identities = 33/79 (41%), Positives = 44/79 (55%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D KS+D+FR++P KD+ S NTIV G ++ G R ALE LY + E G FS VTFS
Sbjct: 215 DVEKSLDMFRKLPCKDVVSWNTIVDGLMQCGCERRALEQLYSMVEYGIGFSAVTFSIALI 274
Query: 59 XXXXXXXXXXERKIHCKIL 3
R++H +L
Sbjct: 275 LASSLSVVELGRQLHGMVL 293
Score = 21.2 bits (43), Expect(2) = 4e-07
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 273 IMIGVYLDIGD 241
IMIG YL +GD
Sbjct: 205 IMIGAYLRVGD 215
>gb|EYU39453.1| hypothetical protein MIMGU_mgv1a017931mg, partial [Mimulus
guttatus]
Length = 571
Score = 59.7 bits (143), Expect = 4e-07
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = -1
Query: 224 IDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXXXXXXX 45
+D F R+P K +SS NTI+ G L+ G ALELL+ + ++GT F+ VTFS
Sbjct: 169 LDFFWRLPIKTVSSWNTIIGGLLQQGLEINALELLHDMVKVGTTFNRVTFSISLVLASSL 228
Query: 44 XXXXXERKIHCKIL 3
R+IHC++L
Sbjct: 229 KSLVLGRQIHCQLL 242
>gb|EXC29932.1| hypothetical protein L484_015125 [Morus notabilis]
Length = 705
Score = 59.3 bits (142), Expect = 5e-07
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = -1
Query: 230 KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXXXXX 51
KS+ L +PF+D+ S NTI+ G +RNG R ALELLY++ + GT ++ TFS
Sbjct: 168 KSLHLLNELPFRDVDSWNTIISGLMRNGHERTALELLYEVVKNGTPLNKFTFSIGLVLAS 227
Query: 50 XXXXXXXERKIHCKIL 3
R+IH +L
Sbjct: 228 TLSLVELGRQIHGFVL 243
>ref|XP_004234885.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Solanum lycopersicum]
Length = 616
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/75 (42%), Positives = 47/75 (62%)
Frame = -1
Query: 227 SIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXXXXXX 48
S++LF+ MP KD+SS NTI+ G L++G +R AL+LL Q++ GT F+ VTFS
Sbjct: 218 SVELFKIMPEKDVSSWNTIIDGLLQHGFDRDALKLLRQMTLDGTSFNNVTFSISSALMSS 277
Query: 47 XXXXXXERKIHCKIL 3
R+IH K++
Sbjct: 278 LRNLELGRQIHGKVM 292
>ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87162577|gb|ABD28372.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355499174|gb|AES80377.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 755
Score = 58.5 bits (140), Expect = 9e-07
Identities = 32/88 (36%), Positives = 49/88 (55%)
Frame = -1
Query: 266 LVCIWILETDT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFS 87
++ ++ E D KS+++FR P KD+ S NTI+ G ++ G R+ALE LY + GT FS
Sbjct: 206 MIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLALEQLYCMVAHGTEFS 265
Query: 86 EVTFSXXXXXXXXXXXXXXERKIHCKIL 3
VTFS R++H ++L
Sbjct: 266 PVTFSIALILVSSLSLVEVGRQLHGRVL 293
>ref|XP_002514857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545908|gb|EEF47411.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 832
Score = 58.2 bits (139), Expect = 1e-06
Identities = 31/79 (39%), Positives = 47/79 (59%)
Frame = -1
Query: 239 DT*KSIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXX 60
D S++LF+ + FK+I+S NTI+ G ++NG +ALELLY++ E G F+ VTFS
Sbjct: 463 DVESSLELFQSLYFKNIASWNTIIDGLMKNGFETIALELLYKMVESGLGFNSVTFSVALN 522
Query: 59 XXXXXXXXXXERKIHCKIL 3
++IH +IL
Sbjct: 523 LVSCLVNLELGKQIHGRIL 541
>ref|XP_006352141.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Solanum tuberosum]
Length = 618
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/75 (42%), Positives = 46/75 (61%)
Frame = -1
Query: 227 SIDLFRRMPFKDISSCNTIVVGQLRNGRNRVALELLYQLSEIGTVFSEVTFSXXXXXXXX 48
S+ LF+ MP KD+SS NTI+ G L++G +R AL+LL Q++ GT F+ VTFS
Sbjct: 220 SVKLFKIMPEKDVSSWNTIIDGLLQHGFDRDALKLLRQMALDGTSFNNVTFSISSALMSS 279
Query: 47 XXXXXXERKIHCKIL 3
R+IH K++
Sbjct: 280 LKNLELGRQIHGKVM 294