BLASTX nr result
ID: Sinomenium22_contig00028546
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00028546
(1303 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like... 118 6e-24
ref|XP_007016041.1| RING/U-box superfamily protein, putative [Th... 100 2e-18
ref|XP_006349051.1| PREDICTED: RING-H2 finger protein ATL57-like... 98 9e-18
ref|XP_004250990.1| PREDICTED: RING-H2 finger protein ATL57-like... 96 5e-17
gb|EYU37018.1| hypothetical protein MIMGU_mgv1a013522mg [Mimulus... 95 6e-17
ref|XP_002523741.1| zinc finger protein, putative [Ricinus commu... 95 8e-17
ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp.... 92 7e-16
ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thali... 91 1e-15
gb|EYU36119.1| hypothetical protein MIMGU_mgv1a019491mg, partial... 89 6e-15
ref|XP_006409808.1| hypothetical protein EUTSA_v10017824mg [Eutr... 88 9e-15
ref|XP_004229261.1| PREDICTED: RING-H2 finger protein ATL2-like ... 86 5e-14
ref|XP_006342827.1| PREDICTED: RING-H2 finger protein ATL2-like ... 85 8e-14
ref|XP_002298167.2| hypothetical protein POPTR_0001s21960g, part... 84 1e-13
ref|XP_006386846.1| zinc finger family protein [Populus trichoca... 82 4e-13
ref|XP_004134225.1| PREDICTED: RING-H2 finger protein ATL2-like ... 82 4e-13
ref|XP_006593558.1| PREDICTED: RING-H2 finger protein ATL13-like... 82 5e-13
gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x P... 82 5e-13
gb|EPS74383.1| hypothetical protein M569_00375, partial [Genlise... 82 7e-13
ref|XP_004976649.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 82 7e-13
ref|XP_004247403.1| PREDICTED: RING-H2 finger protein ATL2-like ... 82 7e-13
>ref|XP_002273630.1| PREDICTED: RING-H2 finger protein ATL57-like [Vitis vinifera]
Length = 244
Score = 118 bits (295), Expect = 6e-24
Identities = 67/130 (51%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LPLF Y G K E +DC +CL++FE K+TV++IPYC H FH CID W S VSCP+CRS
Sbjct: 120 LPLFSYHGDAK-ETLDCPVCLTQFEDKDTVKIIPYCRHVFHPPCIDTWLSSHVSCPVCRS 178
Query: 916 TQLFRLS----SAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSSFTER 1083
TQLF S EG D G +S R T + E E L VRRT+SCSS ER
Sbjct: 179 TQLFPAKDGRCSVVQEGSDEGGSQSHERLTADDGDTYVEVES---LAVRRTTSCSSLGER 235
Query: 1084 EYSLRRTSSF 1113
L RTSSF
Sbjct: 236 AL-LHRTSSF 244
>ref|XP_007016041.1| RING/U-box superfamily protein, putative [Theobroma cacao]
gi|508786404|gb|EOY33660.1| RING/U-box superfamily
protein, putative [Theobroma cacao]
Length = 251
Score = 100 bits (248), Expect = 2e-18
Identities = 60/135 (44%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP++ Y G K + IDCAICLSEFE KE V+ IP C H FH +CID W S VSCP+CR
Sbjct: 128 LPVYSYHGDAKYQ-IDCAICLSEFEEKECVKTIPCCEHVFHVECIDTWLTSHVSCPVCRG 186
Query: 916 TQLFRLSSAKSEG-----LDRGVGESLGRSTVRSEEALTERERQMVLG----VRRTSSCS 1068
T+L + EG +D+GV E A+ + MV+G V RTSSC
Sbjct: 187 TRLLEIKGGAGEGVMQERIDQGVSEF---------SAVDINDTCMVMGTTSRVMRTSSCP 237
Query: 1069 SFTEREYSLRRTSSF 1113
+R L+RT SF
Sbjct: 238 RLGQRA-MLQRTFSF 251
>ref|XP_006349051.1| PREDICTED: RING-H2 finger protein ATL57-like [Solanum tuberosum]
Length = 238
Score = 97.8 bits (242), Expect = 9e-18
Identities = 59/131 (45%), Positives = 72/131 (54%), Gaps = 5/131 (3%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LPL Y G+ K DC ICLSEFE E VR+IPYC H FHQQC+D W S V+CPLCRS
Sbjct: 120 LPLISYGGAAKHLIEDCPICLSEFEVSELVRLIPYCRHVFHQQCLDTWLSSHVTCPLCRS 179
Query: 916 TQLFR-----LSSAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSSFTE 1080
TQ F+ G + GV E RSTV +E +RR+ S S+
Sbjct: 180 TQFFKNVDEVCLDVVDVGNENGVSE---RSTV--------QECDTCRCIRRSCSSSNLGS 228
Query: 1081 REYSLRRTSSF 1113
R +L R++SF
Sbjct: 229 R-VTLHRSASF 238
>ref|XP_004250990.1| PREDICTED: RING-H2 finger protein ATL57-like [Solanum lycopersicum]
Length = 236
Score = 95.5 bits (236), Expect = 5e-17
Identities = 58/130 (44%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LPL Y G+ K DC ICLSEFE E VR+IPYC H FHQQC+D W S V+CPLCRS
Sbjct: 120 LPLISYGGAAKHLIEDCPICLSEFEVSELVRLIPYCRHVFHQQCLDTWLSSHVTCPLCRS 179
Query: 916 TQLFRLSSAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLG----VRRTSSCSSFTER 1083
TQ F K E L VR E ++ER +RR+ S S+ R
Sbjct: 180 TQFF-----KDE-------VCLDIVDVRDENVVSERSTVQQCDTCRCIRRSCSSSNLGSR 227
Query: 1084 EYSLRRTSSF 1113
+L R++SF
Sbjct: 228 -VTLHRSASF 236
>gb|EYU37018.1| hypothetical protein MIMGU_mgv1a013522mg [Mimulus guttatus]
Length = 218
Score = 95.1 bits (235), Expect = 6e-17
Identities = 55/128 (42%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPI--DCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLC 909
LPL Y G+ P+ DC ICLSEF +E V++IPYCGH FH CID W S V+CPLC
Sbjct: 99 LPLVAYGGAAADRPMIDDCPICLSEFREREAVKLIPYCGHVFHPGCIDTWLASHVTCPLC 158
Query: 910 RSTQLFRLSSAKSEGL--DRGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSSFTER 1083
RS QLF+ + DR +GE RSTV ++ T + G T +C R
Sbjct: 159 RSAQLFKSVEELCLDVTGDRVIGE---RSTVEGDDTCT------IDGAAATCTCPHSCNR 209
Query: 1084 EYSLRRTS 1107
R TS
Sbjct: 210 TVLERGTS 217
>ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
gi|223537045|gb|EEF38681.1| zinc finger protein, putative
[Ricinus communis]
Length = 254
Score = 94.7 bits (234), Expect = 8e-17
Identities = 56/142 (39%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP++ Y E I+CA+CL EFE KETV+ IPYC H FH +CI+ W V+CP+CR
Sbjct: 116 LPVYSYYHGEAKYQIECAVCLGEFEEKETVKSIPYCKHMFHLECIETWLKLHVTCPVCRG 175
Query: 916 TQLFRLSSAKSEGLDRGVG-----------------ESLGRSTVRSEEALTERERQMVLG 1044
TQ + S +G D G G + GRS V + E LG
Sbjct: 176 TQFLEVKSRDGDGGDGGGGSDKVVRIRVDDGGNSSQQDQGRSMVGDADTGIELG---TLG 232
Query: 1045 VRRTSSCSSFTEREYSLRRTSS 1110
RT +CSS ER L TSS
Sbjct: 233 TGRTGNCSSLGER-ILLSETSS 253
>ref|XP_002880959.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297326798|gb|EFH57218.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 234
Score = 91.7 bits (226), Expect = 7e-16
Identities = 50/118 (42%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP++ Y + K DC ICLSEFE ETV++IP+CGH FH C+D W S V+CPLCRS
Sbjct: 121 LPVYHYTKATKQRNEDCVICLSEFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRS 180
Query: 916 TQLFRLSSAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLG--VRRTSSCSSFTER 1083
QLF + LG + + E + V+ VRR SSCSS +R
Sbjct: 181 NQLFS-------------DKDLGMQEPPDQGSSEEHDTCDVVDPCVRRCSSCSSLGQR 225
>ref|NP_180361.1| RING-H2 finger protein ATL57 [Arabidopsis thaliana]
gi|68565332|sp|Q9SJJ7.1|ATL57_ARATH RecName: Full=RING-H2
finger protein ATL57 gi|4510422|gb|AAD21508.1| putative
RING zinc finger protein [Arabidopsis thaliana]
gi|26452105|dbj|BAC43142.1| putative RING finger protein
[Arabidopsis thaliana] gi|28950793|gb|AAO63320.1|
At2g27940 [Arabidopsis thaliana]
gi|330252968|gb|AEC08062.1| RING-H2 finger protein ATL57
[Arabidopsis thaliana]
Length = 237
Score = 90.5 bits (223), Expect = 1e-15
Identities = 48/116 (41%), Positives = 63/116 (54%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP++ Y + K DC ICLS+FE ETV++IP+CGH FH C+D W S V+CPLCRS
Sbjct: 124 LPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRS 183
Query: 916 TQLFRLSSAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSSFTER 1083
QLF D G+ E + + + + VRR SSCSS +R
Sbjct: 184 NQLF-------SDKDLGMQEPPDQDSAEEHDTCDGVD----TCVRRCSSCSSLGQR 228
>gb|EYU36119.1| hypothetical protein MIMGU_mgv1a019491mg, partial [Mimulus
guttatus]
Length = 203
Score = 88.6 bits (218), Expect = 6e-15
Identities = 40/69 (57%), Positives = 48/69 (69%), Gaps = 4/69 (5%)
Frame = +1
Query: 736 LPLFVYDGSEKAE----PIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCP 903
LPL Y + AE DC +CLSEF+ ETV++IP CGH FH +CID W FS V+CP
Sbjct: 131 LPLVAYGKAAAAEHRRMSDDCPVCLSEFQEGETVKLIPNCGHVFHSKCIDTWLFSYVTCP 190
Query: 904 LCRSTQLFR 930
LCRSTQLF+
Sbjct: 191 LCRSTQLFK 199
>ref|XP_006409808.1| hypothetical protein EUTSA_v10017824mg [Eutrema salsugineum]
gi|557110977|gb|ESQ51261.1| hypothetical protein
EUTSA_v10017824mg [Eutrema salsugineum]
Length = 233
Score = 87.8 bits (216), Expect = 9e-15
Identities = 48/116 (41%), Positives = 64/116 (55%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP++ Y K DC ICLS+FE ETV+++P+CGH FH C+D W S VSCP CRS
Sbjct: 121 LPVYRYTTEAKQRIEDCVICLSDFEEGETVKVLPHCGHVFHVDCVDTWLSSHVSCPFCRS 180
Query: 916 TQLFRLSSAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSSFTER 1083
+Q+ D+G S RSTV + + + +RR SSCSS +R
Sbjct: 181 SQVLP---------DQGSVGSSCRSTVGDHDTC---DGGVGPCMRRCSSCSSLGQR 224
>ref|XP_004229261.1| PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
Length = 300
Score = 85.5 bits (210), Expect = 5e-14
Identities = 43/106 (40%), Positives = 56/106 (52%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP+FVY EP++CA+CLSEFE E R++P C H FH +CID WF S +CPLCRS
Sbjct: 101 LPVFVYSDKTHPEPLECAVCLSEFEENEKGRVLPKCNHSFHSECIDMWFHSHSTCPLCRS 160
Query: 916 TQLFRLSSAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLGVRR 1053
L ++ V + S+ EE + LG RR
Sbjct: 161 PVEAVLIGPDINRVEVAVTVNEPGSSSGCEENSSHHSNMTPLGCRR 206
>ref|XP_006342827.1| PREDICTED: RING-H2 finger protein ATL2-like [Solanum tuberosum]
Length = 306
Score = 84.7 bits (208), Expect = 8e-14
Identities = 34/60 (56%), Positives = 42/60 (70%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP+FVY EP++CA+CLSEFE E R++P C H FH +CID WF S +CPLCRS
Sbjct: 101 LPVFVYSDKTHPEPLECAVCLSEFEENEQGRVLPKCNHSFHSECIDMWFHSHSTCPLCRS 160
>ref|XP_002298167.2| hypothetical protein POPTR_0001s21960g, partial [Populus trichocarpa]
gi|550347854|gb|EEE82972.2| hypothetical protein
POPTR_0001s21960g, partial [Populus trichocarpa]
Length = 188
Score = 84.3 bits (207), Expect = 1e-13
Identities = 45/112 (40%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP++ Y + I+CAICL EFE KE V+MIP C H FH QCID W V+CP+CR
Sbjct: 77 LPVYSYYHGDVKYQIECAICLGEFEEKEAVKMIPKCHHVFHLQCIDTWLEMHVTCPVCRG 136
Query: 916 TQLFRLSSAKSEGL-------DRGVGESLGRSTVRSEEALTERERQMVLGVR 1050
Q + ++GL D+G + RS V + + E R V+GV+
Sbjct: 137 AQFVQEKGGGNDGLGVIQERVDQGASQPEARSEVGNGDTSLE-VRGEVIGVQ 187
>ref|XP_006386846.1| zinc finger family protein [Populus trichocarpa]
gi|550345644|gb|ERP64643.1| zinc finger family protein
[Populus trichocarpa]
Length = 293
Score = 82.4 bits (202), Expect = 4e-13
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP+FVY + I+CA+CLSEFE E R++P C H FH +CID WF S +CPLCRS
Sbjct: 95 LPVFVYSRKTHQDSIECAVCLSEFEENERGRVLPKCNHSFHTECIDMWFHSHSTCPLCRS 154
Query: 916 TQLFRLSSAKSEGLDRGVGES 978
+ EG + G+ E+
Sbjct: 155 PVEPVAENPVPEGSNFGISEA 175
>ref|XP_004134225.1| PREDICTED: RING-H2 finger protein ATL2-like [Cucumis sativus]
gi|449503830|ref|XP_004162198.1| PREDICTED: RING-H2
finger protein ATL2-like [Cucumis sativus]
Length = 293
Score = 82.4 bits (202), Expect = 4e-13
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP+F + ++PIDCA+CLSEFE E R +P C H FH CID WF S +CPLCRS
Sbjct: 97 LPVFTFSSKSHSDPIDCAVCLSEFEENEKGRTLPKCSHSFHIDCIDMWFHSHATCPLCRS 156
>ref|XP_006593558.1| PREDICTED: RING-H2 finger protein ATL13-like [Glycine max]
Length = 520
Score = 82.0 bits (201), Expect = 5e-13
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Frame = +1
Query: 736 LPLFVYDG--SEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLC 909
LP+F+Y K P DCA+CL EFE ++ +R++P C H FH +CID W S +CPLC
Sbjct: 112 LPVFLYKAIIGLKKYPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLC 171
Query: 910 RSTQL--FRLSSAKSE---GLDRGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSSF 1074
R+T L F S+A S L+ G ES S E + ERE V RTSS +
Sbjct: 172 RATLLPEFSASNACSPIVLVLESGSSES-------SREIVPERE-PAAAAVGRTSSVITA 223
Query: 1075 TER 1083
R
Sbjct: 224 NSR 226
>gb|AAW33880.1| RING-H2 subgroup RHE protein [Populus tremula x Populus alba]
Length = 293
Score = 82.0 bits (201), Expect = 5e-13
Identities = 37/81 (45%), Positives = 49/81 (60%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP+FVY + I+CA+CLSEFE E R++P C H FH +CID WF S +CPLCRS
Sbjct: 95 LPVFVYPRKTHQDSIECAVCLSEFEENERGRVLPKCNHSFHTECIDMWFHSHSTCPLCRS 154
Query: 916 TQLFRLSSAKSEGLDRGVGES 978
+ EG + G+ E+
Sbjct: 155 PVEPVAENPVPEGSNFGISEA 175
>gb|EPS74383.1| hypothetical protein M569_00375, partial [Genlisea aurea]
Length = 170
Score = 81.6 bits (200), Expect = 7e-13
Identities = 44/101 (43%), Positives = 57/101 (56%)
Frame = +1
Query: 781 DCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRSTQLFRLSSAKSEGLD 960
DC+ICLSEF+ E V++IPYCGH FH CID W + V+CPLCRS++LF ++E +
Sbjct: 72 DCSICLSEFQEGEKVKLIPYCGHVFHPICIDTWLSAHVTCPLCRSSKLF--IKRRNEEVC 129
Query: 961 RGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSSFTER 1083
V G S A TE + G+RR S S R
Sbjct: 130 LDVTRPYGPS-----HAPTESTAETSSGMRRICSLSEMDHR 165
>ref|XP_004976649.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 392
Score = 81.6 bits (200), Expect = 7e-13
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Frame = +1
Query: 757 GSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRSTQLF--- 927
G DC++CL EF E++R++P C H FHQQCID W S +CPLCRS F
Sbjct: 155 GDASVHTTDCSVCLGEFRDGESLRLLPKCSHAFHQQCIDKWLKSHSNCPLCRSNITFIAV 214
Query: 928 RLSSAKSEGLDRGVGESLGRSTVRSEEALTERERQMVLGVRRTSSCSS 1071
+ A E RG GES GR T +E + + +++ +++ + SS
Sbjct: 215 GMGMATPEPEGRGPGESAGRDTQAAEVVVVMDDLEIMCDEQQSVAGSS 262
>ref|XP_004247403.1| PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
Length = 198
Score = 81.6 bits (200), Expect = 7e-13
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +1
Query: 736 LPLFVYDGSEKAEPIDCAICLSEFEAKETVRMIPYCGHFFHQQCIDAWFFSKVSCPLCRS 915
LP+FVYD PI+C +CL+EFE ET R++P C H FH +CID WF S +CP+CR+
Sbjct: 94 LPVFVYDAEFYNPPIECPVCLAEFENGETGRVLPKCNHCFHCECIDMWFQSHCNCPICRA 153
Query: 916 TQLFRLSSAKSEGLDRGV 969
+ K G D V
Sbjct: 154 PIQVKAIDVKESGEDEVV 171