BLASTX nr result
ID: Sinomenium22_contig00028495
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00028495
(600 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus s... 154 1e-64
ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citr... 154 1e-64
ref|XP_004252931.1| PREDICTED: poly(A) polymerase-like [Solanum ... 137 2e-58
ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Popu... 135 3e-58
emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera] 144 5e-58
ref|XP_006349957.1| PREDICTED: poly(A) polymerase-like [Solanum ... 136 5e-58
ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifer... 141 3e-57
ref|XP_007035860.1| Poly(A) polymerase, putative isoform 1 [Theo... 135 3e-56
ref|XP_007035861.1| Poly(A) polymerase 3, putative isoform 2 [Th... 135 3e-56
ref|XP_004503248.1| PREDICTED: poly(A) polymerase-like [Cicer ar... 129 7e-54
ref|XP_006299136.1| hypothetical protein CARUB_v10015278mg [Caps... 130 1e-46
ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidop... 124 2e-46
ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana] gi|... 123 5e-46
gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-393... 123 5e-46
ref|XP_004984590.1| PREDICTED: poly(A) polymerase-like isoform X... 107 4e-45
ref|XP_004984591.1| PREDICTED: poly(A) polymerase-like isoform X... 107 4e-45
ref|NP_001152292.1| LOC100285931 [Zea mays] gi|195654767|gb|ACG4... 108 9e-45
ref|XP_004229028.1| PREDICTED: poly(A) polymerase-like [Solanum ... 97 7e-44
gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays] 105 1e-43
gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana] 123 3e-43
>ref|XP_006488811.1| PREDICTED: poly(A) polymerase-like [Citrus sinensis]
Length = 570
Score = 154 bits (389), Expect(3) = 1e-64
Identities = 68/94 (72%), Positives = 79/94 (84%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
+RD RP F W LFEPFPY+K Y RF+++ L+A+NQ +LGDWVGWVKSRFRSL+LKLEE
Sbjct: 385 TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 444
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCN 19
VQ LCDPNPTEY D+D EP+VVFYWGLQPGR N
Sbjct: 445 VQGLCDPNPTEYIDVDVTEPHVVFYWGLQPGRTN 478
Score = 107 bits (268), Expect(3) = 1e-64
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = -2
Query: 557 HMFARHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQ 378
H+ HP S++ L++ FF T+A+WPWP+PVML+ + P +E RSLMPI+LPCS
Sbjct: 300 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPH 359
Query: 377 EFCHSNISKSTFNRIRVELLRGHALT 300
E+CHSNI++STF +IR E LRGH T
Sbjct: 360 EYCHSNITRSTFYKIRTEFLRGHNTT 385
Score = 32.3 bits (72), Expect(3) = 1e-64
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L GFLGG+H+ +L A+VCQ
Sbjct: 285 LHGFLGGVHLAILVAHVCQ 303
>ref|XP_006419338.1| hypothetical protein CICLE_v10004938mg [Citrus clementina]
gi|557521211|gb|ESR32578.1| hypothetical protein
CICLE_v10004938mg [Citrus clementina]
Length = 458
Score = 154 bits (389), Expect(3) = 1e-64
Identities = 68/94 (72%), Positives = 79/94 (84%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
+RD RP F W LFEPFPY+K Y RF+++ L+A+NQ +LGDWVGWVKSRFRSL+LKLEE
Sbjct: 273 TRDLMRPDFDWHFLFEPFPYSKKYARFVRVYLSASNQDDLGDWVGWVKSRFRSLILKLEE 332
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCN 19
VQ LCDPNPTEY D+D EP+VVFYWGLQPGR N
Sbjct: 333 VQGLCDPNPTEYIDVDVTEPHVVFYWGLQPGRTN 366
Score = 107 bits (268), Expect(3) = 1e-64
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = -2
Query: 557 HMFARHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQ 378
H+ HP S++ L++ FF T+A+WPWP+PVML+ + P +E RSLMPI+LPCS
Sbjct: 188 HVCQNHPKGSLNTLVANFFKTYAYWPWPTPVMLQDPMLPAAGYPSETRSLMPIRLPCSPH 247
Query: 377 EFCHSNISKSTFNRIRVELLRGHALT 300
E+CHSNI++STF +IR E LRGH T
Sbjct: 248 EYCHSNITRSTFYKIRTEFLRGHNTT 273
Score = 32.3 bits (72), Expect(3) = 1e-64
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L GFLGG+H+ +L A+VCQ
Sbjct: 173 LHGFLGGVHLAILVAHVCQ 191
>ref|XP_004252931.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
Length = 560
Score = 137 bits (344), Expect(3) = 2e-58
Identities = 60/96 (62%), Positives = 74/96 (77%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++D P F W+ LFEPFPYA+ Y F++I L+A ++ ELGDWVGWVKSRFR LL+KLEE
Sbjct: 370 TKDMLSPDFDWNILFEPFPYARKYGLFVKIFLSACDKDELGDWVGWVKSRFRCLLVKLEE 429
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFT 13
+ CDPNPTEY D DA+EPNV+FYWGL GR + T
Sbjct: 430 LLGFCDPNPTEYVDTDASEPNVIFYWGLPTGRADLT 465
Score = 103 bits (256), Expect(3) = 2e-58
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCH 366
RHP++S+SALI + F TFA WPWP+PV+L+ ++ + S MPIQLPCS EFCH
Sbjct: 289 RHPSASLSALILLLFKTFALWPWPTPVILQDQIARPFIPTHDKVSWMPIQLPCSPYEFCH 348
Query: 365 SNISKSTFNRIRVELLRGHALT 300
SNI++STF +IR E LRGH LT
Sbjct: 349 SNITRSTFYKIRTEFLRGHMLT 370
Score = 33.5 bits (75), Expect(3) = 2e-58
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+GF GGIH+ VL+A++CQ
Sbjct: 270 LLGFFGGIHLAVLSAFICQ 288
>ref|XP_002311376.2| hypothetical protein POPTR_0008s10210g [Populus trichocarpa]
gi|550332775|gb|EEE88743.2| hypothetical protein
POPTR_0008s10210g [Populus trichocarpa]
Length = 495
Score = 135 bits (339), Expect(3) = 3e-58
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = -1
Query: 261 LFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEEVQVLCDPNPTEYA 82
+FEPFPY+ Y RF++I L+A +Q ELGDWVGWVKS FR LLLKLE VQ CDPNP EY
Sbjct: 323 IFEPFPYSTNYTRFVKIYLSAPDQDELGDWVGWVKSHFRCLLLKLEAVQGFCDPNPMEYV 382
Query: 81 DLDAAEPNVVFYWGLQPGRCNFTYLK 4
D+DA+EPNVVFYWGL RCNF Y++
Sbjct: 383 DMDASEPNVVFYWGLNRSRCNFVYIE 408
Score = 104 bits (260), Expect(3) = 3e-58
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = -2
Query: 539 PNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHSN 360
PN+S+ ALIS FF+T+A WPWP+PVML+ + +V E R MPI+LPCS E+CHSN
Sbjct: 229 PNASVIALISNFFSTYAMWPWPTPVMLQDGMSSNVEDVIETRFYMPIRLPCSPYEYCHSN 288
Query: 359 ISKSTFNRIRVELLRGHALT 300
++KSTF +IR E LRGH++T
Sbjct: 289 VTKSTFTKIRAEFLRGHSMT 308
Score = 33.1 bits (74), Expect(3) = 3e-58
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L GFLGG+H+ VL A+VCQ
Sbjct: 208 LNGFLGGVHLAVLAAFVCQ 226
>emb|CAN79659.1| hypothetical protein VITISV_014509 [Vitis vinifera]
Length = 604
Score = 144 bits (362), Expect(3) = 5e-58
Identities = 65/96 (67%), Positives = 78/96 (81%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
+RD R F W+ +FEPF Y+K Y RFI+I L+++NQ ELGDWVGWVKSRFR LL K+EE
Sbjct: 418 TRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEE 477
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFT 13
VQ LCDPNPTE+ D DA EPNVVF+WG+QPGR NF+
Sbjct: 478 VQGLCDPNPTEFIDPDAGEPNVVFFWGVQPGRINFS 513
Score = 97.4 bits (241), Expect(3) = 5e-58
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLE-GRLPPVNAEVTEMRSLMPIQLPCSLQEFC 369
++P+++++ L+S FF TF+ WPWP+PV LE GRLP E R+LMPIQLPCS +C
Sbjct: 338 KNPHANLNVLMSSFFKTFSGWPWPTPVALEDGRLP--TGGTRETRALMPIQLPCSPYGYC 395
Query: 368 HSNISKSTFNRIRVELLRGHALT 300
HSNI+KSTF RI EL GHALT
Sbjct: 396 HSNITKSTFYRITTELTLGHALT 418
Score = 30.8 bits (68), Expect(3) = 5e-58
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L G+ GG+H+ +L A+VCQ
Sbjct: 319 LFGYFGGVHLAILAAFVCQ 337
>ref|XP_006349957.1| PREDICTED: poly(A) polymerase-like [Solanum tuberosum]
Length = 560
Score = 136 bits (343), Expect(3) = 5e-58
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++D P F W+ LFEPFPYA+ Y F++I L+A ++ ELGDWVGWVKSRFR LL+KLEE
Sbjct: 370 TKDMLSPDFDWNILFEPFPYARKYGLFVKIFLSACDKDELGDWVGWVKSRFRCLLVKLEE 429
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCN 19
+ CDPNPTEYAD DA+EPNV+FYWGL GR +
Sbjct: 430 LLGFCDPNPTEYADTDASEPNVIFYWGLPTGRAD 463
Score = 102 bits (253), Expect(3) = 5e-58
Identities = 46/82 (56%), Positives = 59/82 (71%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCH 366
RHP++S+SALI + F TF WPWP+PV+L+ ++ + S MPIQLPCS EFCH
Sbjct: 289 RHPSASLSALILLLFKTFTLWPWPTPVILQDQITRPFTPTHDKVSWMPIQLPCSPYEFCH 348
Query: 365 SNISKSTFNRIRVELLRGHALT 300
SNI++STF +IR E LRGH LT
Sbjct: 349 SNITRSTFYKIRTEFLRGHMLT 370
Score = 33.5 bits (75), Expect(3) = 5e-58
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+GF GGIH+ VL+A++CQ
Sbjct: 270 LLGFFGGIHLAVLSAFICQ 288
>ref|XP_002279844.1| PREDICTED: poly(A) polymerase [Vitis vinifera]
gi|296083219|emb|CBI22855.3| unnamed protein product
[Vitis vinifera]
Length = 563
Score = 141 bits (355), Expect(3) = 3e-57
Identities = 64/96 (66%), Positives = 77/96 (80%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
+RD R F W+ +FEPF Y+K Y RFI+I L+++NQ ELGDWVGWVKSRFR LL K+EE
Sbjct: 377 TRDLLRLDFDWNDIFEPFCYSKKYSRFIKIYLSSSNQDELGDWVGWVKSRFRFLLAKVEE 436
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFT 13
VQ LCDPNPTE+ D DA PNVVF+WG+QPGR NF+
Sbjct: 437 VQGLCDPNPTEFIDPDAGGPNVVFFWGVQPGRINFS 472
Score = 97.4 bits (241), Expect(3) = 3e-57
Identities = 48/83 (57%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLE-GRLPPVNAEVTEMRSLMPIQLPCSLQEFC 369
++P+++++ L+S FF TF+ WPWP+PV LE GRLP E R+LMPIQLPCS +C
Sbjct: 297 KNPHANLNVLMSSFFKTFSGWPWPTPVALEDGRLP--TGGTRETRALMPIQLPCSPYGYC 354
Query: 368 HSNISKSTFNRIRVELLRGHALT 300
HSNI+KSTF RI EL GHALT
Sbjct: 355 HSNITKSTFYRITTELTLGHALT 377
Score = 30.8 bits (68), Expect(3) = 3e-57
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L G+ GG+H+ +L A+VCQ
Sbjct: 278 LFGYFGGVHLAILAAFVCQ 296
>ref|XP_007035860.1| Poly(A) polymerase, putative isoform 1 [Theobroma cacao]
gi|508714889|gb|EOY06786.1| Poly(A) polymerase, putative
isoform 1 [Theobroma cacao]
Length = 555
Score = 135 bits (341), Expect(3) = 3e-56
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = -1
Query: 270 WSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEEVQVLCDPNPT 91
+ + EPFPY + Y RF++I ++A+ Q ELGDWVGW+KSRFR L+LKLEEVQ LCDPNP
Sbjct: 316 FDNILEPFPYTQTYTRFVKIFVSASKQDELGDWVGWIKSRFRCLILKLEEVQGLCDPNPA 375
Query: 90 EYADLDAAEPNVVFYWGLQPGRCNFTYLKS 1
EY DLD AEPNVVFYWGLQPG+ N ++S
Sbjct: 376 EYIDLDVAEPNVVFYWGLQPGKTNVIDIES 405
Score = 97.8 bits (242), Expect(3) = 3e-56
Identities = 45/80 (56%), Positives = 57/80 (71%)
Frame = -2
Query: 539 PNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHSN 360
PN+S+SALIS FF TFA WPWP+PV+L + TE + MPI+LPC+ E+C N
Sbjct: 229 PNASLSALISNFFKTFALWPWPTPVVLRDGMSQHTINPTETQLFMPIRLPCNPYEYCRCN 288
Query: 359 ISKSTFNRIRVELLRGHALT 300
I+K+TF +IR ELLRGH LT
Sbjct: 289 ITKNTFYKIRAELLRGHNLT 308
Score = 32.7 bits (73), Expect(3) = 3e-56
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L GFLGG+H+ +L A+VCQ
Sbjct: 208 LNGFLGGVHLAILAAFVCQ 226
>ref|XP_007035861.1| Poly(A) polymerase 3, putative isoform 2 [Theobroma cacao]
gi|508714890|gb|EOY06787.1| Poly(A) polymerase 3,
putative isoform 2 [Theobroma cacao]
Length = 416
Score = 135 bits (341), Expect(3) = 3e-56
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = -1
Query: 270 WSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEEVQVLCDPNPT 91
+ + EPFPY + Y RF++I ++A+ Q ELGDWVGW+KSRFR L+LKLEEVQ LCDPNP
Sbjct: 241 FDNILEPFPYTQTYTRFVKIFVSASKQDELGDWVGWIKSRFRCLILKLEEVQGLCDPNPA 300
Query: 90 EYADLDAAEPNVVFYWGLQPGRCNFTYLKS 1
EY DLD AEPNVVFYWGLQPG+ N ++S
Sbjct: 301 EYIDLDVAEPNVVFYWGLQPGKTNVIDIES 330
Score = 97.8 bits (242), Expect(3) = 3e-56
Identities = 45/80 (56%), Positives = 57/80 (71%)
Frame = -2
Query: 539 PNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHSN 360
PN+S+SALIS FF TFA WPWP+PV+L + TE + MPI+LPC+ E+C N
Sbjct: 154 PNASLSALISNFFKTFALWPWPTPVVLRDGMSQHTINPTETQLFMPIRLPCNPYEYCRCN 213
Query: 359 ISKSTFNRIRVELLRGHALT 300
I+K+TF +IR ELLRGH LT
Sbjct: 214 ITKNTFYKIRAELLRGHNLT 233
Score = 32.7 bits (73), Expect(3) = 3e-56
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L GFLGG+H+ +L A+VCQ
Sbjct: 133 LNGFLGGVHLAILAAFVCQ 151
>ref|XP_004503248.1| PREDICTED: poly(A) polymerase-like [Cicer arietinum]
Length = 485
Score = 129 bits (325), Expect(3) = 7e-54
Identities = 57/95 (60%), Positives = 68/95 (71%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
+RD + F W +FEPFPY+KIY RF++I L+ +Q +LGDWVGWVKSRFR L LE
Sbjct: 321 TRDILKTDFHWDNIFEPFPYSKIYSRFVKIYLSTPDQCQLGDWVGWVKSRFRGFLAILEG 380
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNF 16
V+ CDPNPTEY + EPNV FYWGLQP R NF
Sbjct: 381 VEGFCDPNPTEYVANEKTEPNVAFYWGLQPSRNNF 415
Score = 93.6 bits (231), Expect(3) = 7e-54
Identities = 42/85 (49%), Positives = 59/85 (69%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCH 366
RHP+++++ALI FF FAFW WP+PV+L+ + +V + RS MPI LP E+CH
Sbjct: 240 RHPDATLNALIVNFFRIFAFWRWPTPVILQEGMLLTTVDVIDTRSCMPIWLPSGPYEYCH 299
Query: 365 SNISKSTFNRIRVELLRGHALTLGI 291
SNI++STF RI+ E +RGH +T I
Sbjct: 300 SNITRSTFYRIKAEFMRGHIMTRDI 324
Score = 35.0 bits (79), Expect(3) = 7e-54
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+G+LGG+H+ VL AYVCQ
Sbjct: 221 LLGYLGGVHLAVLAAYVCQ 239
>ref|XP_006299136.1| hypothetical protein CARUB_v10015278mg [Capsella rubella]
gi|482567845|gb|EOA32034.1| hypothetical protein
CARUB_v10015278mg [Capsella rubella]
Length = 500
Score = 130 bits (326), Expect(2) = 1e-46
Identities = 58/100 (58%), Positives = 72/100 (72%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++DY P F W LFEP+PYA Y F +I L+AANQ +L +WVGWVKSRFR LLLK+EE
Sbjct: 309 TKDYLNPNFSWKNLFEPYPYANTYTWFTKIHLSAANQEDLSNWVGWVKSRFRCLLLKIEE 368
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFTYLKS 1
V CDPNPTEY + A +PN+VFYWGLQ N + ++S
Sbjct: 369 VYGFCDPNPTEYVETYAKQPNIVFYWGLQLRTINVSDIES 408
Score = 83.2 bits (204), Expect(2) = 1e-46
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = -2
Query: 536 NSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHSNI 357
N+++S+L++ FFNTFA W WP PVML P LMPIQLPC +FC+SNI
Sbjct: 234 NATLSSLLANFFNTFAHWQWPIPVMLLDDTYPATGSPP---GLMPIQLPCGPHQFCNSNI 290
Query: 356 SKSTFNRIRVELLRGHALT 300
++STF +I E LRGH +T
Sbjct: 291 TRSTFYKIMAEFLRGHNVT 309
>ref|XP_002882480.1| polynucleotide adenylyltransferase [Arabidopsis lyrata subsp.
lyrata] gi|297328320|gb|EFH58739.1| polynucleotide
adenylyltransferase [Arabidopsis lyrata subsp. lyrata]
Length = 507
Score = 124 bits (310), Expect(3) = 2e-46
Identities = 55/100 (55%), Positives = 70/100 (70%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++DY +P F W LFE +PY Y F +I L+AANQ +L DWVGWVKSRFR LL K+EE
Sbjct: 319 TKDYLKPNFSWKNLFELYPYENTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLSKIEE 378
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFTYLKS 1
V +CDPNPTEY + +PN+VFYWGLQ N + ++S
Sbjct: 379 VYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIES 418
Score = 79.0 bits (193), Expect(3) = 2e-46
Identities = 39/80 (48%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = -2
Query: 536 NSSISALISIFFNTFAFWPWPSPV-MLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHSN 360
N+++S+L++ FF FA W WP+PV +LE P A LMPIQLPC ++C+SN
Sbjct: 244 NATLSSLLANFFYIFAHWQWPTPVVLLEDTYPATGAPP----GLMPIQLPCGSHQYCNSN 299
Query: 359 ISKSTFNRIRVELLRGHALT 300
I++STF +I E LRGH LT
Sbjct: 300 ITRSTFYKIMAEFLRGHNLT 319
Score = 30.4 bits (67), Expect(3) = 2e-46
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVC 547
L GFLGG+H+ +L A+VC
Sbjct: 222 LNGFLGGVHMAILAAFVC 239
>ref|NP_187308.3| poly(A) polymerase 3 [Arabidopsis thaliana]
gi|62320636|dbj|BAD95301.1| poly(A) polymerase
[Arabidopsis thaliana] gi|332640894|gb|AEE74415.1|
poly(A) polymerase 3 [Arabidopsis thaliana]
Length = 507
Score = 123 bits (308), Expect(3) = 5e-46
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++DY + F W LFE +PYA Y F +I L+AANQ +L DWVGWVKSRFR LL+K+EE
Sbjct: 317 TKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEE 376
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFTYLKS 1
V +CDPNPTEY + +PN+VFYWGLQ N + ++S
Sbjct: 377 VYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIES 416
Score = 78.2 bits (191), Expect(3) = 5e-46
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 PNSSISALISIFFNTFAFWPWPSPV-MLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHS 363
PN+++S+L++ FF TFA W WP+PV +LE P A LMPIQLPC ++C+S
Sbjct: 241 PNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPSTGAPP----GLMPIQLPCGSHQYCNS 296
Query: 362 NISKSTFNRIRVELLRGHALT 300
I++STF +I E L GH LT
Sbjct: 297 TITRSTFYKIVAEFLLGHNLT 317
Score = 30.4 bits (67), Expect(3) = 5e-46
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVC 547
L GFLGG+H+ +L A+VC
Sbjct: 220 LNGFLGGVHMAILAAFVC 237
>gb|AAG51325.1|AC020580_5 poly(A) polymerase, putative; 41591-39333 [Arabidopsis thaliana]
Length = 482
Score = 123 bits (308), Expect(3) = 5e-46
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++DY + F W LFE +PYA Y F +I L+AANQ +L DWVGWVKSRFR LL+K+EE
Sbjct: 292 TKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEE 351
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFTYLKS 1
V +CDPNPTEY + +PN+VFYWGLQ N + ++S
Sbjct: 352 VYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIES 391
Score = 78.2 bits (191), Expect(3) = 5e-46
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 PNSSISALISIFFNTFAFWPWPSPV-MLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHS 363
PN+++S+L++ FF TFA W WP+PV +LE P A LMPIQLPC ++C+S
Sbjct: 216 PNATLSSLLANFFYTFAHWQWPTPVVLLEDTYPSTGAPP----GLMPIQLPCGSHQYCNS 271
Query: 362 NISKSTFNRIRVELLRGHALT 300
I++STF +I E L GH LT
Sbjct: 272 TITRSTFYKIVAEFLLGHNLT 292
Score = 30.4 bits (67), Expect(3) = 5e-46
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVC 547
L GFLGG+H+ +L A+VC
Sbjct: 195 LNGFLGGVHMAILAAFVC 212
>ref|XP_004984590.1| PREDICTED: poly(A) polymerase-like isoform X1 [Setaria italica]
Length = 535
Score = 107 bits (267), Expect(3) = 4e-45
Identities = 50/88 (56%), Positives = 61/88 (69%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++D F WS LF PFPY YK F++I L+A EL DWVGWVKSRFR+L+LKLE
Sbjct: 370 TKDTRTTDFDWSWLFAPFPYGARYKCFLRIVLSAPMAEELRDWVGWVKSRFRNLILKLES 429
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGL 37
+ V CDP+P+E D EPNVVF+WGL
Sbjct: 430 LGVFCDPDPSEQVDHTINEPNVVFFWGL 457
Score = 90.5 bits (223), Expect(3) = 4e-45
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCH 366
RHPN+SI++L+S+FF F WPWP PV L PP + SLMPI LPC QEFC
Sbjct: 291 RHPNASINSLLSLFFEIFVHWPWPLPVSLLE--PPALCRGADGCSLMPIMLPCIPQEFCS 348
Query: 365 SNISKSTFNRIRVELLRGHALT 300
S+ ++STF++I+ EL RG+ALT
Sbjct: 349 SSTTESTFSKIKEELRRGYALT 370
Score = 30.8 bits (68), Expect(3) = 4e-45
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+GF GIH+ +L AYVC+
Sbjct: 272 LLGFFAGIHLAILAAYVCR 290
>ref|XP_004984591.1| PREDICTED: poly(A) polymerase-like isoform X2 [Setaria italica]
Length = 497
Score = 107 bits (267), Expect(3) = 4e-45
Identities = 50/88 (56%), Positives = 61/88 (69%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++D F WS LF PFPY YK F++I L+A EL DWVGWVKSRFR+L+LKLE
Sbjct: 332 TKDTRTTDFDWSWLFAPFPYGARYKCFLRIVLSAPMAEELRDWVGWVKSRFRNLILKLES 391
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGL 37
+ V CDP+P+E D EPNVVF+WGL
Sbjct: 392 LGVFCDPDPSEQVDHTINEPNVVFFWGL 419
Score = 90.5 bits (223), Expect(3) = 4e-45
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCH 366
RHPN+SI++L+S+FF F WPWP PV L PP + SLMPI LPC QEFC
Sbjct: 253 RHPNASINSLLSLFFEIFVHWPWPLPVSLLE--PPALCRGADGCSLMPIMLPCIPQEFCS 310
Query: 365 SNISKSTFNRIRVELLRGHALT 300
S+ ++STF++I+ EL RG+ALT
Sbjct: 311 SSTTESTFSKIKEELRRGYALT 332
Score = 30.8 bits (68), Expect(3) = 4e-45
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+GF GIH+ +L AYVC+
Sbjct: 234 LLGFFAGIHLAILAAYVCR 252
>ref|NP_001152292.1| LOC100285931 [Zea mays] gi|195654767|gb|ACG46851.1| poly [Zea mays]
gi|238006566|gb|ACR34318.1| unknown [Zea mays]
gi|414866508|tpg|DAA45065.1| TPA: poly [Zea mays]
Length = 535
Score = 108 bits (269), Expect(3) = 9e-45
Identities = 51/88 (57%), Positives = 61/88 (69%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
S+D F WS LF PFPY YK F++I L+A EL DWVGWVKSRFR+LLLKLE
Sbjct: 370 SKDTRSTDFNWSWLFAPFPYGARYKCFLRIVLSAPMGEELRDWVGWVKSRFRNLLLKLES 429
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGL 37
+ V CDP+P+E D +PNVVF+WGL
Sbjct: 430 LGVYCDPDPSEQVDHTITDPNVVFFWGL 457
Score = 88.6 bits (218), Expect(3) = 9e-45
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCH 366
RHPN+SI+ L+S+FF+ F WPWP PV L PPV + SLMPI LPC EFC
Sbjct: 291 RHPNASINTLLSLFFDIFVHWPWPLPVSLLD--PPVPCRGPDGCSLMPIMLPCIPPEFCS 348
Query: 365 SNISKSTFNRIRVELLRGHALT 300
S+ ++STF++I+ EL RG+AL+
Sbjct: 349 SSTTESTFSKIKEELWRGYALS 370
Score = 30.8 bits (68), Expect(3) = 9e-45
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+GF GIH+ +L AYVC+
Sbjct: 272 LLGFFAGIHLAILAAYVCR 290
>ref|XP_004229028.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
Length = 468
Score = 97.1 bits (240), Expect(3) = 7e-44
Identities = 41/71 (57%), Positives = 57/71 (80%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++D RP F W+ LFEP+PY + Y++F++I L+A+++ ELGDWVG VKSRFR L++KLEE
Sbjct: 370 TKDILRPDFDWNNLFEPYPYPRKYEKFVKIFLSASDKDELGDWVGCVKSRFRCLIIKLEE 429
Query: 120 VQVLCDPNPTE 88
+ CDPNPTE
Sbjct: 430 LLGFCDPNPTE 440
Score = 94.4 bits (233), Expect(3) = 7e-44
Identities = 49/87 (56%), Positives = 60/87 (68%), Gaps = 2/87 (2%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRL--PPVNAEVTEMRSLMPIQLPCSLQEF 372
RHP +S+SAL IFF TFAFWPWP+PV+L+ + P + T+ MPIQLPCS +F
Sbjct: 290 RHPTASLSALFFIFFKTFAFWPWPTPVILQDGVAWPFIP---TDKVLWMPIQLPCSPYQF 346
Query: 371 CHSNISKSTFNRIRVELLRGHALTLGI 291
CHSN +STF I+ ELLRGH LT I
Sbjct: 347 CHSNTVRSTFFIIKSELLRGHTLTKDI 373
Score = 33.1 bits (74), Expect(3) = 7e-44
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+GF GG+H+ VL+A++CQ
Sbjct: 271 LLGFFGGVHLAVLSAFICQ 289
>gb|AFW88553.1| hypothetical protein ZEAMMB73_008817 [Zea mays]
Length = 508
Score = 105 bits (262), Expect(3) = 1e-43
Identities = 49/88 (55%), Positives = 61/88 (69%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
S+D WS LF PFPY YK F++I L+A + EL DWVGWVKSRFR+LLLKLE
Sbjct: 370 SKDTRSTDSDWSWLFAPFPYGARYKCFLRIVLSAPMEDELRDWVGWVKSRFRNLLLKLES 429
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGL 37
+ V CDP+P++ D +PNVVF+WGL
Sbjct: 430 LGVYCDPDPSKQVDHTITDPNVVFFWGL 457
Score = 87.4 bits (215), Expect(3) = 1e-43
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = -2
Query: 545 RHPNSSISALISIFFNTFAFWPWPSPVMLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCH 366
RHPN+SI+ L+S+FF+ F WPWP PV L PPV + SLMPI LPC EFC
Sbjct: 291 RHPNASINTLLSLFFDIFVHWPWPLPVSLLD--PPVLCGGPDGCSLMPIMLPCIPPEFCS 348
Query: 365 SNISKSTFNRIRVELLRGHALT 300
S+ ++STF++I+ EL RG+AL+
Sbjct: 349 SSTTESTFSKIKEELRRGYALS 370
Score = 30.8 bits (68), Expect(3) = 1e-43
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1
Query: 600 LVGFLGGIHIMVLTAYVCQ 544
L+GF GIH+ +L AYVC+
Sbjct: 272 LLGFFAGIHLAILAAYVCR 290
>gb|AAP86215.1| poly(A) polymerase [Arabidopsis thaliana]
Length = 483
Score = 123 bits (308), Expect(2) = 3e-43
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = -1
Query: 300 SRDYARPYFQWSTLFEPFPYAKIYKRFIQISLAAANQGELGDWVGWVKSRFRSLLLKLEE 121
++DY + F W LFE +PYA Y F +I L+AANQ +L DWVGWVKSRFR LL+K+EE
Sbjct: 293 TKDYLKLNFSWKDLFELYPYANTYTWFTKIHLSAANQEDLSDWVGWVKSRFRCLLIKIEE 352
Query: 120 VQVLCDPNPTEYADLDAAEPNVVFYWGLQPGRCNFTYLKS 1
V +CDPNPTEY + +PN+VFYWGLQ N + ++S
Sbjct: 353 VYGICDPNPTEYVETYTKQPNIVFYWGLQLRTINVSDIES 392
Score = 78.6 bits (192), Expect(2) = 3e-43
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -2
Query: 539 PNSSISALISIFFNTFAFWPWPSPV-MLEGRLPPVNAEVTEMRSLMPIQLPCSLQEFCHS 363
PN+++S+L++ FF TFA W WP+PV +LE P A LMPIQLPC ++C+S
Sbjct: 217 PNATLSSLLANFFYTFALWQWPTPVVLLEDTYPSTGAPP----GLMPIQLPCGSHQYCNS 272
Query: 362 NISKSTFNRIRVELLRGHALT 300
I++STF +I E L GH LT
Sbjct: 273 TITRSTFYKIVAEFLLGHNLT 293