BLASTX nr result
ID: Sinomenium22_contig00028484
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00028484
(567 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
emb|CBI19924.3| unnamed protein product [Vitis vinifera] 97 4e-18
ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containi... 94 3e-17
ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citr... 93 6e-17
ref|XP_002302207.1| pentatricopeptide repeat-containing family p... 84 2e-14
ref|XP_007019278.1| Tetratricopeptide repeat (TPR)-like superfam... 82 1e-13
gb|EYU19539.1| hypothetical protein MIMGU_mgv1a023854mg [Mimulus... 80 4e-13
ref|XP_007201795.1| hypothetical protein PRUPE_ppa003245mg [Prun... 78 2e-12
ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containi... 78 2e-12
ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group] g... 74 3e-11
gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japo... 74 3e-11
ref|XP_004978003.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|XP_006653422.1| PREDICTED: pentatricopeptide repeat-containi... 72 1e-10
ref|XP_002530092.1| pentatricopeptide repeat-containing protein,... 71 2e-10
ref|XP_002447868.1| hypothetical protein SORBIDRAFT_06g017180 [S... 70 3e-10
gb|AFW58323.1| hypothetical protein ZEAMMB73_367038 [Zea mays] 70 5e-10
ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containi... 69 9e-10
gb|EYU32474.1| hypothetical protein MIMGU_mgv1a023403mg [Mimulus... 69 1e-09
ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containi... 69 1e-09
ref|XP_004237749.1| PREDICTED: pentatricopeptide repeat-containi... 68 2e-09
>ref|XP_002279206.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26540
[Vitis vinifera]
Length = 711
Score = 98.2 bits (243), Expect = 1e-18
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
R+G+MDELEDF+ +MPFEPTV MLTRVF+ C EH SRLG+W AE+LNELNP +PF F+I
Sbjct: 644 RHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQI 703
Query: 182 QAENYIG 202
+ +G
Sbjct: 704 LDRSRVG 710
>emb|CBI19924.3| unnamed protein product [Vitis vinifera]
Length = 912
Score = 96.7 bits (239), Expect = 4e-18
Identities = 42/60 (70%), Positives = 51/60 (85%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
R+G+MDELEDF+ +MPFEPTV MLTRVF+ C EH SRLG+W AE+LNELNP +PF F+I
Sbjct: 644 RHGFMDELEDFIKRMPFEPTVAMLTRVFNACSEHGHSRLGKWAAEQLNELNPSTPFHFQI 703
>ref|XP_006473032.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Citrus sinensis]
Length = 1390
Score = 93.6 bits (231), Expect = 3e-17
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
RYGYM ELEDF+N+MPF PTVPML ++FD CR++ + LGEW A RLNELNP +PF F+I
Sbjct: 639 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYATLGEWAARRLNELNPWAPFQFKI 698
Query: 182 QAENY 196
+
Sbjct: 699 TTNRF 703
>ref|XP_006434326.1| hypothetical protein CICLE_v10000445mg [Citrus clementina]
gi|557536448|gb|ESR47566.1| hypothetical protein
CICLE_v10000445mg [Citrus clementina]
Length = 706
Score = 92.8 bits (229), Expect = 6e-17
Identities = 40/60 (66%), Positives = 49/60 (81%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
RYGYM ELEDF+N+MPF PTVPML ++FD CR++ + LGEW A RLNELNP +PF F+I
Sbjct: 639 RYGYMKELEDFVNRMPFNPTVPMLRKIFDKCRKNGYAMLGEWAARRLNELNPWAPFQFKI 698
>ref|XP_002302207.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222843933|gb|EEE81480.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 709
Score = 84.3 bits (207), Expect = 2e-14
Identities = 38/60 (63%), Positives = 46/60 (76%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
RYG M ELE+F+ MPF+PT PMLTRV D C+EH+ RLGEW A+RL+EL+P P FEI
Sbjct: 641 RYGCMKELENFIKDMPFDPTAPMLTRVVDACKEHQCWRLGEWAAKRLDELSPSVPLPFEI 700
>ref|XP_007019278.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508724606|gb|EOY16503.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 731
Score = 82.0 bits (201), Expect = 1e-13
Identities = 38/67 (56%), Positives = 45/67 (67%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
R G M ELE F+ +PFEPTV MLTRVFD C +H R GEW AE+ N+LNP SP FE+
Sbjct: 664 RCGCMKELEKFIKSLPFEPTVAMLTRVFDACEKHGAVRFGEWAAEQHNQLNPSSPLRFEL 723
Query: 182 QAENYIG 202
+ IG
Sbjct: 724 KDRRKIG 730
>gb|EYU19539.1| hypothetical protein MIMGU_mgv1a023854mg [Mimulus guttatus]
Length = 587
Score = 80.1 bits (196), Expect = 4e-13
Identities = 35/60 (58%), Positives = 45/60 (75%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
+YG+MDELE FL MPF+PT +L RVFD R++K +LG W +RLNELNP+ PF F+I
Sbjct: 524 QYGFMDELESFLTNMPFDPTSTILMRVFDYSRKYKCLKLGNWACDRLNELNPLVPFRFDI 583
>ref|XP_007201795.1| hypothetical protein PRUPE_ppa003245mg [Prunus persica]
gi|462397195|gb|EMJ02994.1| hypothetical protein
PRUPE_ppa003245mg [Prunus persica]
Length = 589
Score = 77.8 bits (190), Expect = 2e-12
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNE 148
++GYMDELE+F+ MPF+PTVPMLTRV D CR H RLG+W A+RLNE
Sbjct: 541 QWGYMDELENFVKNMPFDPTVPMLTRVLDACRRHGCLRLGQWAAQRLNE 589
>ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 77.8 bits (190), Expect = 2e-12
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELN 154
++G MDELE F+N MPF+PTVPML R+F+ CREH SRL EW A RLNE N
Sbjct: 644 QHGNMDELEKFINNMPFDPTVPMLERIFNACREHGHSRLAEWVAIRLNEQN 694
>ref|NP_001052854.1| Os04g0436800 [Oryza sativa Japonica Group]
gi|38344064|emb|CAD40816.2| OSJNBa0006B20.8 [Oryza
sativa Japonica Group] gi|113564425|dbj|BAF14768.1|
Os04g0436800 [Oryza sativa Japonica Group]
gi|116310780|emb|CAH67572.1| H0315A08.2 [Oryza sativa
Indica Group] gi|215704891|dbj|BAG94919.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218194892|gb|EEC77319.1| hypothetical protein
OsI_15984 [Oryza sativa Indica Group]
Length = 717
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/60 (53%), Positives = 43/60 (71%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
++GYM ELEDF+ MPFEPT M R+FD CRE+ +LGE A+ +N+ NP++P FEI
Sbjct: 637 KHGYMVELEDFIGHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQCINDSNPLTPVRFEI 696
>gb|EEE61043.1| hypothetical protein OsJ_14892 [Oryza sativa Japonica Group]
Length = 717
Score = 73.6 bits (179), Expect = 3e-11
Identities = 32/60 (53%), Positives = 43/60 (71%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
++GYM ELEDF+ MPFEPT M R+FD CRE+ +LGE A+ +N+ NP++P FEI
Sbjct: 637 KHGYMVELEDFIGHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQCINDSNPLTPVRFEI 696
>ref|XP_004978003.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Setaria italica]
Length = 713
Score = 73.2 bits (178), Expect = 5e-11
Identities = 32/65 (49%), Positives = 45/65 (69%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
++GYM ELEDF++ MPFEPT M R+FD CRE+ +LGE A+R+NE P++P F
Sbjct: 634 KHGYMVELEDFVDHMPFEPTTAMWLRIFDCCREYGNKKLGERAAQRINESKPLTPVRFVE 693
Query: 182 QAENY 196
+ +Y
Sbjct: 694 PSPDY 698
>ref|XP_006653422.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Oryza brachyantha]
Length = 721
Score = 71.6 bits (174), Expect = 1e-10
Identities = 33/66 (50%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
++G+M ELEDF+ MPFEPT M R+FD CRE+ +LGE A+ +N+ NP++P FEI
Sbjct: 639 KHGHMVELEDFIEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVRFEI 698
Query: 182 QAE-NY 196
+ NY
Sbjct: 699 APDCNY 704
>ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530403|gb|EEF32291.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 718
Score = 71.2 bits (173), Expect = 2e-10
Identities = 33/63 (52%), Positives = 42/63 (66%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
RY M LE+F+ MPF+PT ML RVFD C+EH SR +W AE+LN+LNP F+I
Sbjct: 641 RYRCMSRLENFVKGMPFDPTASMLIRVFDACKEHGPSRFRKWVAEQLNKLNPSISSQFQI 700
Query: 182 QAE 190
+ E
Sbjct: 701 RDE 703
>ref|XP_002447868.1| hypothetical protein SORBIDRAFT_06g017180 [Sorghum bicolor]
gi|241939051|gb|EES12196.1| hypothetical protein
SORBIDRAFT_06g017180 [Sorghum bicolor]
Length = 714
Score = 70.5 bits (171), Expect = 3e-10
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
++GYM ELEDF++ MPFEPT M R+FD CRE+ +LGE A+R+N+ P++P F
Sbjct: 636 KHGYMVELEDFVDHMPFEPTTAMWLRIFDCCREYGNRKLGERAAQRINDRKPLTPVIFFE 695
Query: 182 QAENY 196
+Y
Sbjct: 696 STPDY 700
>gb|AFW58323.1| hypothetical protein ZEAMMB73_367038 [Zea mays]
Length = 711
Score = 69.7 bits (169), Expect = 5e-10
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = +2
Query: 2 RYGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFEI 181
++GYM ELEDF++ MPFEPT M R+FD CRE+ +LG+ A+R+N+ P++P F
Sbjct: 633 KHGYMVELEDFVDHMPFEPTTAMWLRIFDCCREYGNRKLGQRAAQRINDSKPLTPVIFVE 692
Query: 182 QAENY 196
A Y
Sbjct: 693 SAPVY 697
>ref|XP_004298070.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Fragaria vesca subsp. vesca]
Length = 693
Score = 68.9 bits (167), Expect = 9e-10
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +2
Query: 8 GYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLN 145
GYMDELE F+ MPF+PTVPMLTRV D C+ H R G+W +RLN
Sbjct: 647 GYMDELESFVRTMPFDPTVPMLTRVVDACKRHGCLRFGKWAVQRLN 692
>gb|EYU32474.1| hypothetical protein MIMGU_mgv1a023403mg [Mimulus guttatus]
Length = 708
Score = 68.6 bits (166), Expect = 1e-09
Identities = 30/58 (51%), Positives = 42/58 (72%)
Frame = +2
Query: 5 YGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNELNPISPFGFE 178
YG+MDELE F+ KMPF+PT +LTRV R+ + LG+W +++L EL+P+ PF FE
Sbjct: 635 YGFMDELERFITKMPFKPTFRILTRVIHFSRKFECFELGQWASDQLGELDPLVPFRFE 692
>ref|XP_006356336.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Solanum tuberosum]
Length = 698
Score = 68.6 bits (166), Expect = 1e-09
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +2
Query: 5 YGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNEL 151
+G+ DELEDF+ KMPF+PT PML RVFD+ +E+ +RLG+W LN L
Sbjct: 648 HGFFDELEDFVEKMPFQPTAPMLARVFDSSKEYNNTRLGKWAVRHLNFL 696
>ref|XP_004237749.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Solanum lycopersicum]
Length = 698
Score = 67.8 bits (164), Expect = 2e-09
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +2
Query: 5 YGYMDELEDFLNKMPFEPTVPMLTRVFDTCREHKQSRLGEWTAERLNEL 151
+G+ DELEDF+ KMPF+PT PML RVFD+ +E+ +RLG+W LN L
Sbjct: 648 HGFFDELEDFVEKMPFQPTAPMLGRVFDSSKEYNNTRLGKWAVRHLNFL 696