BLASTX nr result
ID: Sinomenium22_contig00028416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00028416
(418 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004297601.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 96 4e-18
ref|XP_007215261.1| hypothetical protein PRUPE_ppa004545mg [Prun... 95 1e-17
ref|XP_007215260.1| hypothetical protein PRUPE_ppa004545mg [Prun... 95 1e-17
ref|XP_007215259.1| hypothetical protein PRUPE_ppa004545mg [Prun... 95 1e-17
ref|XP_007024450.1| DEA(D/H)-box RNA helicase family protein [Th... 92 7e-17
gb|EXC11111.1| DEAD-box ATP-dependent RNA helicase 20 [Morus not... 91 1e-16
ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putativ... 91 1e-16
ref|XP_006466042.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 90 3e-16
ref|XP_006466041.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 90 3e-16
ref|XP_006426527.1| hypothetical protein CICLE_v10025421mg [Citr... 90 3e-16
ref|XP_006426526.1| hypothetical protein CICLE_v10025421mg [Citr... 90 3e-16
ref|XP_006426525.1| hypothetical protein CICLE_v10025421mg [Citr... 90 3e-16
ref|XP_006426524.1| hypothetical protein CICLE_v10025421mg [Citr... 90 3e-16
ref|XP_006426523.1| hypothetical protein CICLE_v10025421mg [Citr... 90 3e-16
ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 88 1e-15
emb|CAN70592.1| hypothetical protein VITISV_026736 [Vitis vinifera] 88 1e-15
ref|NP_175911.1| DEAD-box ATP-dependent RNA helicase 20 [Arabido... 80 3e-13
ref|XP_003531619.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 80 3e-13
ref|XP_002891814.1| hypothetical protein ARALYDRAFT_474570 [Arab... 80 4e-13
ref|XP_006366150.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 79 5e-13
>ref|XP_004297601.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Fragaria
vesca subsp. vesca]
Length = 505
Score = 96.3 bits (238), Expect = 4e-18
Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRSGDP SYRDRRSD+ RSSS+RK+YDGA SPKK DLDGLTPFE
Sbjct: 1 MSRYDSRSGDPTSYRDRRSDSGFGGAAGYGGSARSSSSRKDYDGAESPKKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_007215261.1| hypothetical protein PRUPE_ppa004545mg [Prunus persica]
gi|462411411|gb|EMJ16460.1| hypothetical protein
PRUPE_ppa004545mg [Prunus persica]
Length = 504
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXXRSSSTRKEYDGAGSPKKHDLDGLTPFEK 396
MSRYDSRSGDP SYRDR+SD+ RSSS++K+ DGA SP+K DLDGLTPFEK
Sbjct: 1 MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSSKKDCDGAESPRKFDLDGLTPFEK 60
Query: 397 NFYIESP 417
NFY+ESP
Sbjct: 61 NFYVESP 67
>ref|XP_007215260.1| hypothetical protein PRUPE_ppa004545mg [Prunus persica]
gi|462411410|gb|EMJ16459.1| hypothetical protein
PRUPE_ppa004545mg [Prunus persica]
Length = 424
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXXRSSSTRKEYDGAGSPKKHDLDGLTPFEK 396
MSRYDSRSGDP SYRDR+SD+ RSSS++K+ DGA SP+K DLDGLTPFEK
Sbjct: 1 MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSSKKDCDGAESPRKFDLDGLTPFEK 60
Query: 397 NFYIESP 417
NFY+ESP
Sbjct: 61 NFYVESP 67
>ref|XP_007215259.1| hypothetical protein PRUPE_ppa004545mg [Prunus persica]
gi|462411409|gb|EMJ16458.1| hypothetical protein
PRUPE_ppa004545mg [Prunus persica]
Length = 421
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXXRSSSTRKEYDGAGSPKKHDLDGLTPFEK 396
MSRYDSRSGDP SYRDR+SD+ RSSS++K+ DGA SP+K DLDGLTPFEK
Sbjct: 1 MSRYDSRSGDPTSYRDRKSDSGFGVTGYGGSARSSSSKKDCDGAESPRKFDLDGLTPFEK 60
Query: 397 NFYIESP 417
NFY+ESP
Sbjct: 61 NFYVESP 67
>ref|XP_007024450.1| DEA(D/H)-box RNA helicase family protein [Theobroma cacao]
gi|508779816|gb|EOY27072.1| DEA(D/H)-box RNA helicase
family protein [Theobroma cacao]
Length = 505
Score = 92.0 bits (227), Expect = 7e-17
Identities = 46/68 (67%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRSGDP SYRDRRSD+ RSSS+R++YDGA P+K DLDGLTPFE
Sbjct: 1 MSRYDSRSGDPTSYRDRRSDSGFGGASAYGGSMRSSSSRRDYDGAEPPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>gb|EXC11111.1| DEAD-box ATP-dependent RNA helicase 20 [Morus notabilis]
Length = 494
Score = 91.3 bits (225), Expect = 1e-16
Identities = 45/67 (67%), Positives = 51/67 (76%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXXRSSSTRKEYDGAGSPKKHDLDGLTPFEK 396
MSRYDSRSGDP SYRDRRSD+ SSS+R++YDG SPKK D+DGLTPFEK
Sbjct: 1 MSRYDSRSGDPTSYRDRRSDSGFGGSVRS----SSSSRRDYDGGESPKKFDVDGLTPFEK 56
Query: 397 NFYIESP 417
NFY+ESP
Sbjct: 57 NFYVESP 63
>ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 505
Score = 91.3 bits (225), Expect = 1e-16
Identities = 47/68 (69%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRSGDP SYRDRRSD+ RSSS R+EYD A SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSGDPTSYRDRRSDSGFGGALAYGGSGRSSSERREYDRAISPRKSDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006466042.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like isoform X2
[Citrus sinensis]
Length = 504
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRS DP SYRDRRSD+ R+SS++++YDGA SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006466041.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like isoform X1
[Citrus sinensis]
Length = 505
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRS DP SYRDRRSD+ R+SS++++YDGA SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006426527.1| hypothetical protein CICLE_v10025421mg [Citrus clementina]
gi|557528517|gb|ESR39767.1| hypothetical protein
CICLE_v10025421mg [Citrus clementina]
Length = 433
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRS DP SYRDRRSD+ R+SS++++YDGA SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006426526.1| hypothetical protein CICLE_v10025421mg [Citrus clementina]
gi|557528516|gb|ESR39766.1| hypothetical protein
CICLE_v10025421mg [Citrus clementina]
Length = 495
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRS DP SYRDRRSD+ R+SS++++YDGA SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006426525.1| hypothetical protein CICLE_v10025421mg [Citrus clementina]
gi|557528515|gb|ESR39765.1| hypothetical protein
CICLE_v10025421mg [Citrus clementina]
Length = 505
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRS DP SYRDRRSD+ R+SS++++YDGA SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006426524.1| hypothetical protein CICLE_v10025421mg [Citrus clementina]
gi|557528514|gb|ESR39764.1| hypothetical protein
CICLE_v10025421mg [Citrus clementina]
Length = 504
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRS DP SYRDRRSD+ R+SS++++YDGA SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006426523.1| hypothetical protein CICLE_v10025421mg [Citrus clementina]
gi|557528513|gb|ESR39763.1| hypothetical protein
CICLE_v10025421mg [Citrus clementina]
Length = 473
Score = 90.1 bits (222), Expect = 3e-16
Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX-RSSSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSRS DP SYRDRRSD+ R+SS++++YDGA SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRSADPSSYRDRRSDSGFGGASSYGSSVRTSSSKRDYDGAESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
gi|297743075|emb|CBI35942.3| unnamed protein product
[Vitis vinifera]
Length = 506
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX--RSSSTRKEYDGAGSPKKHDLDGLTPF 390
MSRYD RSGDPGSYRDRRS++ RSSS++++ DG SP+K DLDGLTPF
Sbjct: 1 MSRYDGRSGDPGSYRDRRSESGFGGASGYGSGGVRSSSSKRDLDGVESPRKPDLDGLTPF 60
Query: 391 EKNFYIESP 417
EKNFY+ESP
Sbjct: 61 EKNFYVESP 69
>emb|CAN70592.1| hypothetical protein VITISV_026736 [Vitis vinifera]
Length = 115
Score = 88.2 bits (217), Expect = 1e-15
Identities = 43/69 (62%), Positives = 51/69 (73%), Gaps = 2/69 (2%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXX--RSSSTRKEYDGAGSPKKHDLDGLTPF 390
MSRYD RSGDPGSYRDRRS++ RSSS++++ DG SP+K DLDGLTPF
Sbjct: 1 MSRYDGRSGDPGSYRDRRSESGFGGASGYGSGGVRSSSSKRDLDGVESPRKPDLDGLTPF 60
Query: 391 EKNFYIESP 417
EKNFY+ESP
Sbjct: 61 EKNFYVESP 69
>ref|NP_175911.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
gi|75333448|sp|Q9C718.1|RH20_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 20
gi|12321578|gb|AAG50841.1|AC073944_8 ethylene-responsive
RNA helicase, putative [Arabidopsis thaliana]
gi|17065338|gb|AAL32823.1| Unknown protein [Arabidopsis
thaliana] gi|22136216|gb|AAM91186.1| unknown protein
[Arabidopsis thaliana] gi|332195071|gb|AEE33192.1|
DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis
thaliana]
Length = 501
Score = 80.1 bits (196), Expect = 3e-13
Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXXRS-SSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSR+GD SYRDRRSD+ S +S++K+ DG SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRTGDSTSYRDRRSDSGFGGTSSYGSSGSHTSSKKDNDGNESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_003531619.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 80.1 bits (196), Expect = 3e-13
Identities = 43/70 (61%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDA--XXXXXXXXXXXRSSSTRKEYDGAGSPKKH-DLDGLTP 387
MSRYDSRSGDP SYRDRRSD+ SSS R++YD GSPK++ LDGL
Sbjct: 1 MSRYDSRSGDPASYRDRRSDSGLGAPTGFGGSVQHSSSNRRDYDDGGSPKRNLSLDGLPH 60
Query: 388 FEKNFYIESP 417
FEKNFYIESP
Sbjct: 61 FEKNFYIESP 70
>ref|XP_002891814.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata] gi|297337656|gb|EFH68073.1| hypothetical protein
ARALYDRAFT_474570 [Arabidopsis lyrata subsp. lyrata]
Length = 501
Score = 79.7 bits (195), Expect = 4e-13
Identities = 41/68 (60%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXXRS-SSTRKEYDGAGSPKKHDLDGLTPFE 393
MSRYDSR+GD S+RDRRSD+ S SS++K+ DG SP+K DLDGLTPFE
Sbjct: 1 MSRYDSRTGDSTSFRDRRSDSGFGGTSAYGSSGSHSSSKKDNDGNESPRKLDLDGLTPFE 60
Query: 394 KNFYIESP 417
KNFY+ESP
Sbjct: 61 KNFYVESP 68
>ref|XP_006366150.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like isoform X1
[Solanum tuberosum] gi|565401320|ref|XP_006366151.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like
isoform X2 [Solanum tuberosum]
Length = 501
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = +1
Query: 217 MSRYDSRSGDPGSYRDRRSDAXXXXXXXXXXXRSSSTRKEYDGAGSPKKHDLDGLTPFEK 396
MSRYDSR DPGSYRDRRSD+ SSS+R++ +G SP+K +LD LTPFEK
Sbjct: 1 MSRYDSRPADPGSYRDRRSDSGFGGGSNYRS--SSSSRRDSEGKESPRKVNLDDLTPFEK 58
Query: 397 NFYIESP 417
NFY+ESP
Sbjct: 59 NFYVESP 65