BLASTX nr result

ID: Sinomenium22_contig00028145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00028145
         (325 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai...    71   1e-10
gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]     61   1e-07
gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]             56   6e-06

>gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops
           tauschii]
          Length = 950

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 38/61 (62%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = -3

Query: 284 RGALAQR*ELSPCDLEVTGSSRGNSILLY-KVRLRTIDPKWSDPSPVLRICESFVHRAAL 108
           +G+L    +L PCD EVTGSS GNS+LL  + RLRTIDPKWSDPSP      S++HRAAL
Sbjct: 3   KGSLGAAVKLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAAL 62

Query: 107 F 105
           F
Sbjct: 63  F 63


>gb|EMT11946.1| hypothetical protein F775_30464 [Aegilops tauschii]
          Length = 562

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/47 (63%), Positives = 35/47 (74%)
 Frame = -3

Query: 290 IKRGALAQR*ELSPCDLEVTGSSRGNSILLYKVRLRTIDPKWSDPSP 150
           +K+G+L    +L PCD EV GSS GNS+L    RLRTIDPKWSDPSP
Sbjct: 350 LKKGSLGAVVKLLPCDHEVMGSSPGNSLLQKWERLRTIDPKWSDPSP 396


>gb|EMT09624.1| Zinc finger protein 410 [Aegilops tauschii]
          Length = 1424

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = +1

Query: 148 TGEGSDHFGSIVRSLTL-YSKMLFPRLEPVTSRSHGDNSYRCAKAPLLMI 294
           +GEGSDHFGSIVRSL L + K LFP LEPVTS S G+N     + P + +
Sbjct: 64  SGEGSDHFGSIVRSLPLHFCKRLFPGLEPVTSWSQGNNFTAAPRLPFINV 113


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